2024-02-07T10:51:08,339 Created temporary directory: /tmp/pip-build-tracker-o4kavkb1 2024-02-07T10:51:08,340 Initialized build tracking at /tmp/pip-build-tracker-o4kavkb1 2024-02-07T10:51:08,341 Created build tracker: /tmp/pip-build-tracker-o4kavkb1 2024-02-07T10:51:08,342 Entered build tracker: /tmp/pip-build-tracker-o4kavkb1 2024-02-07T10:51:08,343 Created temporary directory: /tmp/pip-wheel-wvy8fazv 2024-02-07T10:51:08,346 Created temporary directory: /tmp/pip-ephem-wheel-cache-8h1rchms 2024-02-07T10:51:08,370 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-02-07T10:51:08,374 2 location(s) to search for versions of capice: 2024-02-07T10:51:08,374 * https://pypi.org/simple/capice/ 2024-02-07T10:51:08,374 * https://www.piwheels.org/simple/capice/ 2024-02-07T10:51:08,375 Fetching project page and analyzing links: https://pypi.org/simple/capice/ 2024-02-07T10:51:08,376 Getting page https://pypi.org/simple/capice/ 2024-02-07T10:51:08,377 Found index url https://pypi.org/simple/ 2024-02-07T10:51:08,593 Fetched page https://pypi.org/simple/capice/ as application/vnd.pypi.simple.v1+json 2024-02-07T10:51:08,598 Found link https://files.pythonhosted.org/packages/2b/cf/eeb11d53ea46d9463d108113249f8a5b8c3023b3822835fd2579c3351924/capice-3.0.0rc0.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.7), version: 3.0.0rc0 2024-02-07T10:51:08,599 Found link https://files.pythonhosted.org/packages/c9/09/fdf73572fc6b25f60b4a5b2729454b1560abff6dd9f7907f45d86bd0ec88/capice-3.0.0rc1.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.0.0rc1 2024-02-07T10:51:08,600 Found link https://files.pythonhosted.org/packages/93/94/a86e20a50a6ae585d21896e5348b2ee157c3a7f49a22e53a014884d069d1/capice-3.0.0rc2.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.0.0rc2 2024-02-07T10:51:08,601 Found link https://files.pythonhosted.org/packages/09/dc/8e44c3e88c1ee6402c17fb3c06b4e56d7580e55dd384f3c6f5c0c9f539ef/capice-3.0.0rc3.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.0.0rc3 2024-02-07T10:51:08,602 Found link https://files.pythonhosted.org/packages/d4/f2/05c3cdda4c711aaddea306235e5b860009d706ba41652ce147ab893aded6/capice-3.0.0rc4.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.0.0rc4 2024-02-07T10:51:08,603 Found link https://files.pythonhosted.org/packages/7a/9f/ef01e39c2096b2cb591e626e9f2631a1226675292da6dd00f805fc832caa/capice-3.0.0.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.0.0 2024-02-07T10:51:08,604 Found link https://files.pythonhosted.org/packages/d4/b4/16c7d979e9bbc625d3914a08da81d0ad0b7960e87b555bb193f5aa3e3d6a/capice-3.1.0.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.1.0 2024-02-07T10:51:08,605 Found link https://files.pythonhosted.org/packages/64/e1/52f85026c4aa93f4a09f2dc8b517abb86d471a8e6b202533c63780fa70e1/capice-3.1.1.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.1.1 2024-02-07T10:51:08,606 Found link https://files.pythonhosted.org/packages/1d/b1/69553bd909b8e972ebf1912f60e71d4ccfa44b221b4ec7d1ae1d5b5c8165/capice-3.1.2.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.1.2 2024-02-07T10:51:08,607 Found link https://files.pythonhosted.org/packages/6b/2e/1bae984c4c990f95db34a0d12b327083437649d05d93606618d6030b8cfb/capice-3.2.0.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.2.0 2024-02-07T10:51:08,608 Found link https://files.pythonhosted.org/packages/f2/46/3fed1bfa6a7e413dda2dcacc72ebcba5cd27e81a300314e8c6b440ba0652/capice-3.2.1.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.2.1 2024-02-07T10:51:08,609 Found link https://files.pythonhosted.org/packages/8e/ec/a0d20fce261cadb53b7674ce6d83f21587812c3d7ed4552c2876e32401b2/capice-3.3.0.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 3.3.0 2024-02-07T10:51:08,610 Found link https://files.pythonhosted.org/packages/e4/39/4c67eadadb4e9ee8b008065c117d11eed66c173c8f03ac1a66c0c80230b0/capice-4.0.0rc1.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 4.0.0rc1 2024-02-07T10:51:08,611 Found link https://files.pythonhosted.org/packages/c8/d4/0b8b9a2459e3bf9ac9ee9fbbfcef0cf633423cd1164d247ef5b35e6bcc1d/capice-4.0.0rc2.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 4.0.0rc2 2024-02-07T10:51:08,613 Found link https://files.pythonhosted.org/packages/ab/ea/b25218d9cbed242679b75aaec27f079eb7271c1338a215fba25f82757b69/capice-4.0.0rc3.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 4.0.0rc3 2024-02-07T10:51:08,614 Found link https://files.pythonhosted.org/packages/44/b9/874d875171dacc166a20b55344da900e3b48b2fac242aaa4e3de80cb542c/capice-4.0.0.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 4.0.0 2024-02-07T10:51:08,615 Found link https://files.pythonhosted.org/packages/4e/78/45d9b78adf34a83e1d0868b8da615a315a94d4ca9c3765ec201787a4df43/capice-5.0.0.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.8), version: 5.0.0 2024-02-07T10:51:08,616 Found link https://files.pythonhosted.org/packages/24/b1/befd125478991c586c6bb9f46d34b67257c43cd7d4372e5edb022c5a55ae/capice-5.1.0.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.10), version: 5.1.0 2024-02-07T10:51:08,617 Found link https://files.pythonhosted.org/packages/98/79/f72187b2c35a46322752abe0af8d6fa793c9514912ab97ea2bb24e6c9b64/capice-5.1.1.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.10), version: 5.1.1 2024-02-07T10:51:08,618 Found link https://files.pythonhosted.org/packages/bd/41/44c6a008ccd819dd44389e6b8c7608288ad6e3f0e6b078d42c25e4195074/capice-5.1.2.tar.gz (from https://pypi.org/simple/capice/) (requires-python:>=3.10), version: 5.1.2 2024-02-07T10:51:08,619 Fetching project page and analyzing links: https://www.piwheels.org/simple/capice/ 2024-02-07T10:51:08,620 Getting page https://www.piwheels.org/simple/capice/ 2024-02-07T10:51:08,621 Found index url https://www.piwheels.org/simple/ 2024-02-07T10:51:08,789 Fetched page https://www.piwheels.org/simple/capice/ as text/html 2024-02-07T10:51:08,795 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-5.0.0-py3-none-any.whl#sha256=5585dc67c452f748016bb4583e4eda883d6c53186d400221a0646c17ae49017f (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2024-02-07T10:51:08,796 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-4.0.0-py3-none-any.whl#sha256=ce4003f7b2d92c69f5096e472af55dff5d10864006ef1fbef028b5ab884bd7d4 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2024-02-07T10:51:08,797 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-4.0.0rc3-py3-none-any.whl#sha256=65ae05d21fe56f15b779ccd358ade7c4d0485aa382fdf139afeddb23204df0aa (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2024-02-07T10:51:08,797 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-4.0.0rc2-py3-none-any.whl#sha256=9edddaa9ec8bdd22de63608d73b375f392d24b4b24a3140e339b90f4526b336f (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2024-02-07T10:51:08,798 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-4.0.0rc1-py3-none-any.whl#sha256=2ffdc4d32ff14ea03e7417e65ac6f49c3fb84ebc8a2b0e904801a4762469b21c (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2024-02-07T10:51:08,798 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.3.0-py3-none-any.whl#sha256=b9a9a3cdfdb1ab474a6183c643babd3470fa84e8c5e3b2c8099a9ffee1c41956 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2024-02-07T10:51:08,799 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.2.1-py3-none-any.whl#sha256=caad9b489f7b29a386b2dce7cb3e01d94d301d2b01ba16e3e094c7aa91435063 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2024-02-07T10:51:08,800 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.2.0-py3-none-any.whl#sha256=b6968da8c90315bcb78449563ad20ff306de8792c485fb03fe2eed8cf19d9f8f (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2024-02-07T10:51:08,800 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.1.2-py3-none-any.whl#sha256=4e9ba6eb75e3459d60954fa5914d742476306fd2fd43c9f0718720c4d0bc769e (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2024-02-07T10:51:08,801 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.1.1-py3-none-any.whl#sha256=4a76c336e6de10af5b82b9e4beb6bb7c2c8eaf792b1b9ab51e6aa14e45068559 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2024-02-07T10:51:08,802 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.1.0-py3-none-any.whl#sha256=ca32fea76a4d432bfaf9ba50b17860b5e1859f71b8ee95ccc9cee625690e6217 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2024-02-07T10:51:08,802 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0-py3-none-any.whl#sha256=822a9c4b54c3814a1879371edfcd207b4c59c26e284a85b4367d4f9c0e070a8b (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2024-02-07T10:51:08,802 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0rc4-py3-none-any.whl#sha256=b8174ee252046b7075aa5b0bff762c95a39bef20b98a032f842c74b1e7bf9a29 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2024-02-07T10:51:08,803 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0rc3-py3-none-any.whl#sha256=4ee7f781a7a6edacfb38af661fab250bdb707a6f63b57c56612ff132ceb55c74 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2024-02-07T10:51:08,803 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0rc2-py3-none-any.whl#sha256=f67afcd30fc1b242beb1b3631528be28745036179d8f8ff75fdd07d13c163206 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2024-02-07T10:51:08,804 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0rc1-py3-none-any.whl#sha256=1f1a3830a436ef9f9f34370a93dea81e04b8e4761fd8ecae8ce10955c1dddac2 (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.8) 2024-02-07T10:51:08,804 Skipping link: No binaries permitted for capice: https://www.piwheels.org/simple/capice/capice-3.0.0rc0-py3-none-any.whl#sha256=db7e870e65a264aa8b90e67c7ad2b62ed2662d850fac021fe20eafa759ccd21a (from https://www.piwheels.org/simple/capice/) (requires-python:>=3.7) 2024-02-07T10:51:08,805 Skipping link: not a file: https://www.piwheels.org/simple/capice/ 2024-02-07T10:51:08,806 Skipping link: not a file: https://pypi.org/simple/capice/ 2024-02-07T10:51:08,826 Given no hashes to check 1 links for project 'capice': discarding no candidates 2024-02-07T10:51:08,854 Collecting capice==5.1.2 2024-02-07T10:51:08,931 Created temporary directory: /tmp/pip-unpack-hpsg1s6x 2024-02-07T10:51:09,146 Downloading capice-5.1.2.tar.gz (39 kB) 2024-02-07T10:51:11,597 Added capice==5.1.2 from https://files.pythonhosted.org/packages/bd/41/44c6a008ccd819dd44389e6b8c7608288ad6e3f0e6b078d42c25e4195074/capice-5.1.2.tar.gz to build tracker '/tmp/pip-build-tracker-o4kavkb1' 2024-02-07T10:51:11,599 Running setup.py (path:/tmp/pip-wheel-wvy8fazv/capice_42ed6dbf2b5d4e36ba7339891e2130b9/setup.py) egg_info for package capice 2024-02-07T10:51:11,600 Created temporary directory: /tmp/pip-pip-egg-info-6wkkbklq 2024-02-07T10:51:11,601 Preparing metadata (setup.py): started 2024-02-07T10:51:11,603 Running command python setup.py egg_info 2024-02-07T10:51:12,935 running egg_info 2024-02-07T10:51:12,937 creating /tmp/pip-pip-egg-info-6wkkbklq/capice.egg-info 2024-02-07T10:51:12,961 writing /tmp/pip-pip-egg-info-6wkkbklq/capice.egg-info/PKG-INFO 2024-02-07T10:51:12,968 writing dependency_links to /tmp/pip-pip-egg-info-6wkkbklq/capice.egg-info/dependency_links.txt 2024-02-07T10:51:12,969 writing entry points to /tmp/pip-pip-egg-info-6wkkbklq/capice.egg-info/entry_points.txt 2024-02-07T10:51:12,972 writing requirements to /tmp/pip-pip-egg-info-6wkkbklq/capice.egg-info/requires.txt 2024-02-07T10:51:12,973 writing top-level names to /tmp/pip-pip-egg-info-6wkkbklq/capice.egg-info/top_level.txt 2024-02-07T10:51:12,975 writing manifest file '/tmp/pip-pip-egg-info-6wkkbklq/capice.egg-info/SOURCES.txt' 2024-02-07T10:51:13,066 reading manifest file '/tmp/pip-pip-egg-info-6wkkbklq/capice.egg-info/SOURCES.txt' 2024-02-07T10:51:13,068 adding license file 'LICENSE' 2024-02-07T10:51:13,071 writing manifest file '/tmp/pip-pip-egg-info-6wkkbklq/capice.egg-info/SOURCES.txt' 2024-02-07T10:51:13,178 Preparing metadata (setup.py): finished with status 'done' 2024-02-07T10:51:13,184 Source in /tmp/pip-wheel-wvy8fazv/capice_42ed6dbf2b5d4e36ba7339891e2130b9 has version 5.1.2, which satisfies requirement capice==5.1.2 from https://files.pythonhosted.org/packages/bd/41/44c6a008ccd819dd44389e6b8c7608288ad6e3f0e6b078d42c25e4195074/capice-5.1.2.tar.gz 2024-02-07T10:51:13,185 Removed capice==5.1.2 from https://files.pythonhosted.org/packages/bd/41/44c6a008ccd819dd44389e6b8c7608288ad6e3f0e6b078d42c25e4195074/capice-5.1.2.tar.gz from build tracker '/tmp/pip-build-tracker-o4kavkb1' 2024-02-07T10:51:13,193 Created temporary directory: /tmp/pip-unpack-0vy8ezf1 2024-02-07T10:51:13,194 Created temporary directory: /tmp/pip-unpack-rbaayxi6 2024-02-07T10:51:13,217 Building wheels for collected packages: capice 2024-02-07T10:51:13,222 Created temporary directory: /tmp/pip-wheel-61xefuo5 2024-02-07T10:51:13,223 Building wheel for capice (setup.py): started 2024-02-07T10:51:13,224 Destination directory: /tmp/pip-wheel-61xefuo5 2024-02-07T10:51:13,225 Running command python setup.py bdist_wheel 2024-02-07T10:51:14,258 running bdist_wheel 2024-02-07T10:51:14,369 running build 2024-02-07T10:51:14,369 running build_py 2024-02-07T10:51:14,397 creating build 2024-02-07T10:51:14,397 creating build/lib 2024-02-07T10:51:14,398 creating build/lib/molgenis 2024-02-07T10:51:14,399 creating build/lib/molgenis/capice 2024-02-07T10:51:14,400 copying src/molgenis/capice/main_capice.py -> build/lib/molgenis/capice 2024-02-07T10:51:14,403 copying src/molgenis/capice/__init__.py -> build/lib/molgenis/capice 2024-02-07T10:51:14,405 copying src/molgenis/capice/main_explain.py -> build/lib/molgenis/capice 2024-02-07T10:51:14,407 copying src/molgenis/capice/main_train.py -> build/lib/molgenis/capice 2024-02-07T10:51:14,410 copying src/molgenis/capice/capice.py -> build/lib/molgenis/capice 2024-02-07T10:51:14,412 copying src/molgenis/capice/main_predict.py -> build/lib/molgenis/capice 2024-02-07T10:51:14,415 creating build/lib/molgenis/capice/utilities 2024-02-07T10:51:14,416 copying src/molgenis/capice/utilities/enums.py -> build/lib/molgenis/capice/utilities 2024-02-07T10:51:14,422 copying src/molgenis/capice/utilities/manual_vep_processor.py -> build/lib/molgenis/capice/utilities 2024-02-07T10:51:14,424 copying src/molgenis/capice/utilities/class_suggestor.py -> build/lib/molgenis/capice/utilities 2024-02-07T10:51:14,426 copying src/molgenis/capice/utilities/categorical_processor.py -> build/lib/molgenis/capice/utilities 2024-02-07T10:51:14,428 copying src/molgenis/capice/utilities/dynamic_loader.py -> build/lib/molgenis/capice/utilities 2024-02-07T10:51:14,437 copying src/molgenis/capice/utilities/__init__.py -> build/lib/molgenis/capice/utilities 2024-02-07T10:51:14,439 copying src/molgenis/capice/utilities/predictor.py -> build/lib/molgenis/capice/utilities 2024-02-07T10:51:14,441 copying src/molgenis/capice/utilities/input_parser.py -> build/lib/molgenis/capice/utilities 2024-02-07T10:51:14,442 copying src/molgenis/capice/utilities/input_processor.py -> build/lib/molgenis/capice/utilities 2024-02-07T10:51:14,444 copying src/molgenis/capice/utilities/load_file_postprocessor.py -> build/lib/molgenis/capice/utilities 2024-02-07T10:51:14,448 copying src/molgenis/capice/utilities/custom_logging_filter.py -> build/lib/molgenis/capice/utilities 2024-02-07T10:51:14,451 copying src/molgenis/capice/utilities/column_utils.py -> build/lib/molgenis/capice/utilities 2024-02-07T10:51:14,453 creating build/lib/molgenis/capice/vep 2024-02-07T10:51:14,455 copying src/molgenis/capice/vep/type.py -> build/lib/molgenis/capice/vep 2024-02-07T10:51:14,457 copying src/molgenis/capice/vep/length.py -> build/lib/molgenis/capice/vep 2024-02-07T10:51:14,459 copying src/molgenis/capice/vep/sift.py -> build/lib/molgenis/capice/vep 2024-02-07T10:51:14,460 copying src/molgenis/capice/vep/poly_phen.py -> build/lib/molgenis/capice/vep 2024-02-07T10:51:14,462 copying src/molgenis/capice/vep/template.py -> build/lib/molgenis/capice/vep 2024-02-07T10:51:14,464 copying src/molgenis/capice/vep/protein_position.py -> build/lib/molgenis/capice/vep 2024-02-07T10:51:14,466 copying src/molgenis/capice/vep/cdna_position.py -> build/lib/molgenis/capice/vep 2024-02-07T10:51:14,468 copying src/molgenis/capice/vep/template_position.py -> build/lib/molgenis/capice/vep 2024-02-07T10:51:14,469 copying src/molgenis/capice/vep/__init__.py -> build/lib/molgenis/capice/vep 2024-02-07T10:51:14,471 copying src/molgenis/capice/vep/consequence.py -> build/lib/molgenis/capice/vep 2024-02-07T10:51:14,473 copying src/molgenis/capice/vep/amino_acids.py -> build/lib/molgenis/capice/vep 2024-02-07T10:51:14,475 copying src/molgenis/capice/vep/cds_position.py -> build/lib/molgenis/capice/vep 2024-02-07T10:51:14,476 copying src/molgenis/capice/vep/template_sift_polyphen.py -> build/lib/molgenis/capice/vep 2024-02-07T10:51:14,479 creating build/lib/molgenis/capice/core 2024-02-07T10:51:14,480 copying src/molgenis/capice/core/__init__.py -> build/lib/molgenis/capice/core 2024-02-07T10:51:14,481 copying src/molgenis/capice/core/logger.py -> build/lib/molgenis/capice/core 2024-02-07T10:51:14,483 copying src/molgenis/capice/core/args_handler.py -> build/lib/molgenis/capice/core 2024-02-07T10:51:14,485 copying src/molgenis/capice/core/capice_manager.py -> build/lib/molgenis/capice/core 2024-02-07T10:51:14,487 copying src/molgenis/capice/core/capice_exporter.py -> build/lib/molgenis/capice/core 2024-02-07T10:51:14,490 creating build/lib/molgenis/capice/cli 2024-02-07T10:51:14,491 copying src/molgenis/capice/cli/args_handler_train.py -> build/lib/molgenis/capice/cli 2024-02-07T10:51:14,493 copying src/molgenis/capice/cli/__init__.py -> build/lib/molgenis/capice/cli 2024-02-07T10:51:14,495 copying src/molgenis/capice/cli/args_handler_explain.py -> build/lib/molgenis/capice/cli 2024-02-07T10:51:14,496 copying src/molgenis/capice/cli/args_handler_parent.py -> build/lib/molgenis/capice/cli 2024-02-07T10:51:14,499 copying src/molgenis/capice/cli/args_handler_predict.py -> build/lib/molgenis/capice/cli 2024-02-07T10:51:14,501 creating build/lib/molgenis/capice/validators 2024-02-07T10:51:14,502 copying src/molgenis/capice/validators/model_validator.py -> build/lib/molgenis/capice/validators 2024-02-07T10:51:14,504 copying src/molgenis/capice/validators/post_vep_processing_validator.py -> build/lib/molgenis/capice/validators 2024-02-07T10:51:14,506 copying src/molgenis/capice/validators/input_validator.py -> build/lib/molgenis/capice/validators 2024-02-07T10:51:14,508 copying src/molgenis/capice/validators/__init__.py -> build/lib/molgenis/capice/validators 2024-02-07T10:51:14,510 copying src/molgenis/capice/validators/version_validator.py -> build/lib/molgenis/capice/validators 2024-02-07T10:51:14,512 copying src/molgenis/capice/validators/post_file_parse_validator.py -> build/lib/molgenis/capice/validators 2024-02-07T10:51:14,514 copying src/molgenis/capice/validators/predict_validator.py -> build/lib/molgenis/capice/validators 2024-02-07T10:51:14,519 copying src/molgenis/capice/validators/property_type_validator.py -> build/lib/molgenis/capice/validators 2024-02-07T10:51:14,552 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-02-07T10:51:14,552 !! 2024-02-07T10:51:14,553 ******************************************************************************** 2024-02-07T10:51:14,554 Please avoid running ``setup.py`` directly. 2024-02-07T10:51:14,554 Instead, use pypa/build, pypa/installer or other 2024-02-07T10:51:14,555 standards-based tools. 2024-02-07T10:51:14,555 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-02-07T10:51:14,556 ******************************************************************************** 2024-02-07T10:51:14,557 !! 2024-02-07T10:51:14,557 self.initialize_options() 2024-02-07T10:51:14,579 installing to build/bdist.linux-armv7l/wheel 2024-02-07T10:51:14,579 running install 2024-02-07T10:51:14,603 running install_lib 2024-02-07T10:51:14,627 creating build/bdist.linux-armv7l 2024-02-07T10:51:14,628 creating build/bdist.linux-armv7l/wheel 2024-02-07T10:51:14,630 creating build/bdist.linux-armv7l/wheel/molgenis 2024-02-07T10:51:14,631 creating build/bdist.linux-armv7l/wheel/molgenis/capice 2024-02-07T10:51:14,633 creating build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2024-02-07T10:51:14,634 copying build/lib/molgenis/capice/utilities/enums.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2024-02-07T10:51:14,637 copying build/lib/molgenis/capice/utilities/manual_vep_processor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2024-02-07T10:51:14,639 copying build/lib/molgenis/capice/utilities/class_suggestor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2024-02-07T10:51:14,641 copying build/lib/molgenis/capice/utilities/categorical_processor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2024-02-07T10:51:14,643 copying build/lib/molgenis/capice/utilities/dynamic_loader.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2024-02-07T10:51:14,646 copying build/lib/molgenis/capice/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2024-02-07T10:51:14,648 copying build/lib/molgenis/capice/utilities/predictor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2024-02-07T10:51:14,650 copying build/lib/molgenis/capice/utilities/input_parser.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2024-02-07T10:51:14,652 copying build/lib/molgenis/capice/utilities/input_processor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2024-02-07T10:51:14,654 copying build/lib/molgenis/capice/utilities/load_file_postprocessor.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2024-02-07T10:51:14,656 copying build/lib/molgenis/capice/utilities/custom_logging_filter.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2024-02-07T10:51:14,658 copying build/lib/molgenis/capice/utilities/column_utils.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/utilities 2024-02-07T10:51:14,660 copying build/lib/molgenis/capice/main_capice.py -> build/bdist.linux-armv7l/wheel/molgenis/capice 2024-02-07T10:51:14,663 creating build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2024-02-07T10:51:14,664 copying build/lib/molgenis/capice/vep/type.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2024-02-07T10:51:14,666 copying build/lib/molgenis/capice/vep/length.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2024-02-07T10:51:14,668 copying build/lib/molgenis/capice/vep/sift.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2024-02-07T10:51:14,670 copying build/lib/molgenis/capice/vep/poly_phen.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2024-02-07T10:51:14,672 copying build/lib/molgenis/capice/vep/template.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2024-02-07T10:51:14,673 copying build/lib/molgenis/capice/vep/protein_position.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2024-02-07T10:51:14,675 copying build/lib/molgenis/capice/vep/cdna_position.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2024-02-07T10:51:14,677 copying build/lib/molgenis/capice/vep/template_position.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2024-02-07T10:51:14,678 copying build/lib/molgenis/capice/vep/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2024-02-07T10:51:14,679 copying build/lib/molgenis/capice/vep/consequence.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2024-02-07T10:51:14,681 copying build/lib/molgenis/capice/vep/amino_acids.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2024-02-07T10:51:14,693 copying build/lib/molgenis/capice/vep/cds_position.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2024-02-07T10:51:14,695 copying build/lib/molgenis/capice/vep/template_sift_polyphen.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/vep 2024-02-07T10:51:14,696 copying build/lib/molgenis/capice/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice 2024-02-07T10:51:14,699 creating build/bdist.linux-armv7l/wheel/molgenis/capice/core 2024-02-07T10:51:14,699 copying build/lib/molgenis/capice/core/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/core 2024-02-07T10:51:14,701 copying build/lib/molgenis/capice/core/logger.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/core 2024-02-07T10:51:14,703 copying build/lib/molgenis/capice/core/args_handler.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/core 2024-02-07T10:51:14,705 copying build/lib/molgenis/capice/core/capice_manager.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/core 2024-02-07T10:51:14,707 copying build/lib/molgenis/capice/core/capice_exporter.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/core 2024-02-07T10:51:14,709 copying build/lib/molgenis/capice/main_explain.py -> build/bdist.linux-armv7l/wheel/molgenis/capice 2024-02-07T10:51:14,711 creating build/bdist.linux-armv7l/wheel/molgenis/capice/cli 2024-02-07T10:51:14,712 copying build/lib/molgenis/capice/cli/args_handler_train.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/cli 2024-02-07T10:51:14,714 copying build/lib/molgenis/capice/cli/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/cli 2024-02-07T10:51:14,716 copying build/lib/molgenis/capice/cli/args_handler_explain.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/cli 2024-02-07T10:51:14,718 copying build/lib/molgenis/capice/cli/args_handler_parent.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/cli 2024-02-07T10:51:14,720 copying build/lib/molgenis/capice/cli/args_handler_predict.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/cli 2024-02-07T10:51:14,722 copying build/lib/molgenis/capice/main_train.py -> build/bdist.linux-armv7l/wheel/molgenis/capice 2024-02-07T10:51:14,724 copying build/lib/molgenis/capice/capice.py -> build/bdist.linux-armv7l/wheel/molgenis/capice 2024-02-07T10:51:14,726 copying build/lib/molgenis/capice/main_predict.py -> build/bdist.linux-armv7l/wheel/molgenis/capice 2024-02-07T10:51:14,728 creating build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2024-02-07T10:51:14,729 copying build/lib/molgenis/capice/validators/model_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2024-02-07T10:51:14,731 copying build/lib/molgenis/capice/validators/post_vep_processing_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2024-02-07T10:51:14,733 copying build/lib/molgenis/capice/validators/input_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2024-02-07T10:51:14,735 copying build/lib/molgenis/capice/validators/__init__.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2024-02-07T10:51:14,737 copying build/lib/molgenis/capice/validators/version_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2024-02-07T10:51:14,739 copying build/lib/molgenis/capice/validators/post_file_parse_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2024-02-07T10:51:14,740 copying build/lib/molgenis/capice/validators/predict_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2024-02-07T10:51:14,742 copying build/lib/molgenis/capice/validators/property_type_validator.py -> build/bdist.linux-armv7l/wheel/molgenis/capice/validators 2024-02-07T10:51:14,743 running install_egg_info 2024-02-07T10:51:14,806 running egg_info 2024-02-07T10:51:14,829 writing src/capice.egg-info/PKG-INFO 2024-02-07T10:51:14,834 writing dependency_links to src/capice.egg-info/dependency_links.txt 2024-02-07T10:51:14,836 writing entry points to src/capice.egg-info/entry_points.txt 2024-02-07T10:51:14,839 writing requirements to src/capice.egg-info/requires.txt 2024-02-07T10:51:14,840 writing top-level names to src/capice.egg-info/top_level.txt 2024-02-07T10:51:14,872 reading manifest file 'src/capice.egg-info/SOURCES.txt' 2024-02-07T10:51:14,875 adding license file 'LICENSE' 2024-02-07T10:51:14,878 writing manifest file 'src/capice.egg-info/SOURCES.txt' 2024-02-07T10:51:14,880 Copying src/capice.egg-info to build/bdist.linux-armv7l/wheel/capice-5.1.2-py3.11.egg-info 2024-02-07T10:51:14,891 running install_scripts 2024-02-07T10:51:14,910 creating build/bdist.linux-armv7l/wheel/capice-5.1.2.dist-info/WHEEL 2024-02-07T10:51:14,912 creating '/tmp/pip-wheel-61xefuo5/capice-5.1.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-02-07T10:51:14,916 adding 'molgenis/capice/__init__.py' 2024-02-07T10:51:14,917 adding 'molgenis/capice/capice.py' 2024-02-07T10:51:14,918 adding 'molgenis/capice/main_capice.py' 2024-02-07T10:51:14,920 adding 'molgenis/capice/main_explain.py' 2024-02-07T10:51:14,921 adding 'molgenis/capice/main_predict.py' 2024-02-07T10:51:14,923 adding 'molgenis/capice/main_train.py' 2024-02-07T10:51:14,925 adding 'molgenis/capice/cli/__init__.py' 2024-02-07T10:51:14,926 adding 'molgenis/capice/cli/args_handler_explain.py' 2024-02-07T10:51:14,928 adding 'molgenis/capice/cli/args_handler_parent.py' 2024-02-07T10:51:14,929 adding 'molgenis/capice/cli/args_handler_predict.py' 2024-02-07T10:51:14,930 adding 'molgenis/capice/cli/args_handler_train.py' 2024-02-07T10:51:14,932 adding 'molgenis/capice/core/__init__.py' 2024-02-07T10:51:14,933 adding 'molgenis/capice/core/args_handler.py' 2024-02-07T10:51:14,935 adding 'molgenis/capice/core/capice_exporter.py' 2024-02-07T10:51:14,936 adding 'molgenis/capice/core/capice_manager.py' 2024-02-07T10:51:14,937 adding 'molgenis/capice/core/logger.py' 2024-02-07T10:51:14,939 adding 'molgenis/capice/utilities/__init__.py' 2024-02-07T10:51:14,941 adding 'molgenis/capice/utilities/categorical_processor.py' 2024-02-07T10:51:14,942 adding 'molgenis/capice/utilities/class_suggestor.py' 2024-02-07T10:51:14,943 adding 'molgenis/capice/utilities/column_utils.py' 2024-02-07T10:51:14,945 adding 'molgenis/capice/utilities/custom_logging_filter.py' 2024-02-07T10:51:14,946 adding 'molgenis/capice/utilities/dynamic_loader.py' 2024-02-07T10:51:14,948 adding 'molgenis/capice/utilities/enums.py' 2024-02-07T10:51:14,949 adding 'molgenis/capice/utilities/input_parser.py' 2024-02-07T10:51:14,950 adding 'molgenis/capice/utilities/input_processor.py' 2024-02-07T10:51:14,952 adding 'molgenis/capice/utilities/load_file_postprocessor.py' 2024-02-07T10:51:14,953 adding 'molgenis/capice/utilities/manual_vep_processor.py' 2024-02-07T10:51:14,954 adding 'molgenis/capice/utilities/predictor.py' 2024-02-07T10:51:14,956 adding 'molgenis/capice/validators/__init__.py' 2024-02-07T10:51:14,957 adding 'molgenis/capice/validators/input_validator.py' 2024-02-07T10:51:14,958 adding 'molgenis/capice/validators/model_validator.py' 2024-02-07T10:51:14,960 adding 'molgenis/capice/validators/post_file_parse_validator.py' 2024-02-07T10:51:14,961 adding 'molgenis/capice/validators/post_vep_processing_validator.py' 2024-02-07T10:51:14,962 adding 'molgenis/capice/validators/predict_validator.py' 2024-02-07T10:51:14,963 adding 'molgenis/capice/validators/property_type_validator.py' 2024-02-07T10:51:14,965 adding 'molgenis/capice/validators/version_validator.py' 2024-02-07T10:51:14,966 adding 'molgenis/capice/vep/__init__.py' 2024-02-07T10:51:14,967 adding 'molgenis/capice/vep/amino_acids.py' 2024-02-07T10:51:14,968 adding 'molgenis/capice/vep/cdna_position.py' 2024-02-07T10:51:14,969 adding 'molgenis/capice/vep/cds_position.py' 2024-02-07T10:51:14,971 adding 'molgenis/capice/vep/consequence.py' 2024-02-07T10:51:14,972 adding 'molgenis/capice/vep/length.py' 2024-02-07T10:51:14,973 adding 'molgenis/capice/vep/poly_phen.py' 2024-02-07T10:51:14,974 adding 'molgenis/capice/vep/protein_position.py' 2024-02-07T10:51:14,976 adding 'molgenis/capice/vep/sift.py' 2024-02-07T10:51:14,977 adding 'molgenis/capice/vep/template.py' 2024-02-07T10:51:14,978 adding 'molgenis/capice/vep/template_position.py' 2024-02-07T10:51:14,979 adding 'molgenis/capice/vep/template_sift_polyphen.py' 2024-02-07T10:51:14,980 adding 'molgenis/capice/vep/type.py' 2024-02-07T10:51:14,982 adding 'capice-5.1.2.dist-info/LICENSE' 2024-02-07T10:51:14,985 adding 'capice-5.1.2.dist-info/METADATA' 2024-02-07T10:51:14,986 adding 'capice-5.1.2.dist-info/WHEEL' 2024-02-07T10:51:14,987 adding 'capice-5.1.2.dist-info/entry_points.txt' 2024-02-07T10:51:14,988 adding 'capice-5.1.2.dist-info/top_level.txt' 2024-02-07T10:51:14,990 adding 'capice-5.1.2.dist-info/RECORD' 2024-02-07T10:51:14,992 removing build/bdist.linux-armv7l/wheel 2024-02-07T10:51:15,128 Building wheel for capice (setup.py): finished with status 'done' 2024-02-07T10:51:15,132 Created wheel for capice: filename=capice-5.1.2-py3-none-any.whl size=55905 sha256=0a2baf809c630b1943cf00c061214451e0d147c906351c3c2d33d1bf3b60933c 2024-02-07T10:51:15,133 Stored in directory: /tmp/pip-ephem-wheel-cache-8h1rchms/wheels/0e/29/a6/dae0031cae60a18c5251035045332380a052fea92b3eb4f0b4 2024-02-07T10:51:15,153 Successfully built capice 2024-02-07T10:51:15,160 Removed build tracker: '/tmp/pip-build-tracker-o4kavkb1'