2024-02-08T08:28:28,381 Created temporary directory: /tmp/pip-build-tracker-zx72ug6r 2024-02-08T08:28:28,382 Initialized build tracking at /tmp/pip-build-tracker-zx72ug6r 2024-02-08T08:28:28,382 Created build tracker: /tmp/pip-build-tracker-zx72ug6r 2024-02-08T08:28:28,383 Entered build tracker: /tmp/pip-build-tracker-zx72ug6r 2024-02-08T08:28:28,384 Created temporary directory: /tmp/pip-wheel-uzc5i_3a 2024-02-08T08:28:28,387 Created temporary directory: /tmp/pip-ephem-wheel-cache-k9s94ftv 2024-02-08T08:28:28,409 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-02-08T08:28:28,413 2 location(s) to search for versions of atlas-densities: 2024-02-08T08:28:28,413 * https://pypi.org/simple/atlas-densities/ 2024-02-08T08:28:28,413 * https://www.piwheels.org/simple/atlas-densities/ 2024-02-08T08:28:28,413 Fetching project page and analyzing links: https://pypi.org/simple/atlas-densities/ 2024-02-08T08:28:28,414 Getting page https://pypi.org/simple/atlas-densities/ 2024-02-08T08:28:28,416 Found index url https://pypi.org/simple/ 2024-02-08T08:28:28,630 Fetched page https://pypi.org/simple/atlas-densities/ as application/vnd.pypi.simple.v1+json 2024-02-08T08:28:28,633 Found link https://files.pythonhosted.org/packages/75/a0/31e863dae4118b005ede7f6d9098a6910b9864be8a7912235629124fd1fe/atlas-densities-0.1.1.dev1.tar.gz (from https://pypi.org/simple/atlas-densities/) (requires-python:>=3.7.0), version: 0.1.1.dev1 2024-02-08T08:28:28,634 Found link https://files.pythonhosted.org/packages/de/06/e8be8865b4bd500f567d873b884c95bc950e82d6b629daf4d2b51feee07f/atlas-densities-0.1.1.tar.gz (from https://pypi.org/simple/atlas-densities/) (requires-python:>=3.7.0), version: 0.1.1 2024-02-08T08:28:28,635 Found link https://files.pythonhosted.org/packages/1c/7f/424e4e2a31de90b29ad4b08c106a94110c84fd3472800a26707cb6793cda/atlas-densities-0.1.2.tar.gz (from https://pypi.org/simple/atlas-densities/) (requires-python:>=3.7.0), version: 0.1.2 2024-02-08T08:28:28,636 Found link https://files.pythonhosted.org/packages/d4/ff/487cd59cb1c04b581dfba1c835112a7d148c70f90af88e968e5013cfd229/atlas-densities-0.1.3.tar.gz (from https://pypi.org/simple/atlas-densities/) (requires-python:>=3.7.0), version: 0.1.3 2024-02-08T08:28:28,637 Found link https://files.pythonhosted.org/packages/86/f5/7c7feea0c4c3d9bed1be86bed2d079ec3d076053276e24de09639bf6c4dd/atlas-densities-0.1.4.tar.gz (from https://pypi.org/simple/atlas-densities/) (requires-python:>=3.7.0), version: 0.1.4 2024-02-08T08:28:28,638 Found link https://files.pythonhosted.org/packages/2c/ed/41e6c8f2ff9247f7c5b77a43c28727bf4c9a70bf1e7d9b6d2683e02be24e/atlas-densities-0.1.5.tar.gz (from https://pypi.org/simple/atlas-densities/) (requires-python:>=3.7.0), version: 0.1.5 2024-02-08T08:28:28,639 Found link https://files.pythonhosted.org/packages/21/c8/9e8d339c85e1dc6c8aa7150f71176e1c86465678e142550fc02ff9298e9b/atlas-densities-0.2.0.tar.gz (from https://pypi.org/simple/atlas-densities/) (requires-python:>=3.7.0), version: 0.2.0 2024-02-08T08:28:28,640 Found link https://files.pythonhosted.org/packages/81/59/e8354e4210eca90f39bf76f7f85aa7bb627fe4fe13eaacd772f1069d7f9e/atlas-densities-0.2.1.tar.gz (from https://pypi.org/simple/atlas-densities/) (requires-python:>=3.7.0), version: 0.2.1 2024-02-08T08:28:28,641 Found link https://files.pythonhosted.org/packages/36/b2/076a51f33be3c6886d190364797e6a5abb670a031788ead6bdd23a64f4f0/atlas-densities-0.2.2.tar.gz (from https://pypi.org/simple/atlas-densities/) (requires-python:>=3.7.0), version: 0.2.2 2024-02-08T08:28:28,642 Found link https://files.pythonhosted.org/packages/ab/8a/6fe71c5390bea9c0986738ac7216b6a7ea2719e3e68b2314dad3abd44f9b/atlas-densities-0.2.3.tar.gz (from https://pypi.org/simple/atlas-densities/) (requires-python:>=3.7.0), version: 0.2.3 2024-02-08T08:28:28,643 Fetching project page and analyzing links: https://www.piwheels.org/simple/atlas-densities/ 2024-02-08T08:28:28,643 Getting page https://www.piwheels.org/simple/atlas-densities/ 2024-02-08T08:28:28,645 Found index url https://www.piwheels.org/simple/ 2024-02-08T08:28:28,807 Fetched page https://www.piwheels.org/simple/atlas-densities/ as text/html 2024-02-08T08:28:28,811 Skipping link: No binaries permitted for atlas-densities: https://www.piwheels.org/simple/atlas-densities/atlas_densities-0.2.2-py3-none-any.whl#sha256=6d563eb822c5ce0bf359464a96b5806b1d5221bdc69cc30d19d0e685368536ec (from https://www.piwheels.org/simple/atlas-densities/) (requires-python:>=3.7.0) 2024-02-08T08:28:28,811 Skipping link: No binaries permitted for atlas-densities: https://www.piwheels.org/simple/atlas-densities/atlas_densities-0.2.1-py3-none-any.whl#sha256=7b2fb4c8ebfb6deda2a12d883dbdfeb529aa0b2bfbc4034d0808edd6a289bcee (from https://www.piwheels.org/simple/atlas-densities/) (requires-python:>=3.7.0) 2024-02-08T08:28:28,812 Skipping link: No binaries permitted for atlas-densities: https://www.piwheels.org/simple/atlas-densities/atlas_densities-0.2.0-py3-none-any.whl#sha256=fb4c5d0d67c2e0fa95f43bf995117dc4d8958809fb8d795522e647de85a2e7e4 (from https://www.piwheels.org/simple/atlas-densities/) (requires-python:>=3.7.0) 2024-02-08T08:28:28,812 Skipping link: No binaries permitted for atlas-densities: https://www.piwheels.org/simple/atlas-densities/atlas_densities-0.1.5-py3-none-any.whl#sha256=5fef5da80583667be561af3afe70062d015ef24da71c3bef176043bea603c2c6 (from https://www.piwheels.org/simple/atlas-densities/) (requires-python:>=3.7.0) 2024-02-08T08:28:28,813 Skipping link: No binaries permitted for atlas-densities: https://www.piwheels.org/simple/atlas-densities/atlas_densities-0.1.4-py3-none-any.whl#sha256=d4956925426510d1496ee873465e8178b2599c2fc5e1329503d8335ce50fd1c6 (from https://www.piwheels.org/simple/atlas-densities/) (requires-python:>=3.7.0) 2024-02-08T08:28:28,813 Skipping link: No binaries permitted for atlas-densities: https://www.piwheels.org/simple/atlas-densities/atlas_densities-0.1.3-py3-none-any.whl#sha256=e570061be8379bb89033a1cbbb97eb0754c41fe0214fa16447a01c7ec91a1a9f (from https://www.piwheels.org/simple/atlas-densities/) (requires-python:>=3.7.0) 2024-02-08T08:28:28,813 Skipping link: No binaries permitted for atlas-densities: https://www.piwheels.org/simple/atlas-densities/atlas_densities-0.1.2-py3-none-any.whl#sha256=8525ddeb5820cac5646a8e64609c379dfeda0ef3c1e0fddf611b904fe6717f9a (from https://www.piwheels.org/simple/atlas-densities/) (requires-python:>=3.7.0) 2024-02-08T08:28:28,814 Skipping link: No binaries permitted for atlas-densities: https://www.piwheels.org/simple/atlas-densities/atlas_densities-0.1.1-py3-none-any.whl#sha256=0d8958b6a96c5a8bbb5f56954b074f97f56f62d4bf7d2feb02f324fdd9365ce4 (from https://www.piwheels.org/simple/atlas-densities/) (requires-python:>=3.7.0) 2024-02-08T08:28:28,815 Skipping link: No binaries permitted for atlas-densities: https://www.piwheels.org/simple/atlas-densities/atlas_densities-0.1.1.dev1-py3-none-any.whl#sha256=d5e13258a7e5662c891cc5061dc517d14138a9ea76e72ad43d422c688c5c73b6 (from https://www.piwheels.org/simple/atlas-densities/) (requires-python:>=3.7.0) 2024-02-08T08:28:28,815 Skipping link: not a file: https://www.piwheels.org/simple/atlas-densities/ 2024-02-08T08:28:28,816 Skipping link: not a file: https://pypi.org/simple/atlas-densities/ 2024-02-08T08:28:28,835 Given no hashes to check 1 links for project 'atlas-densities': discarding no candidates 2024-02-08T08:28:28,853 Collecting atlas-densities==0.2.3 2024-02-08T08:28:28,856 Created temporary directory: /tmp/pip-unpack-jzkkhj3_ 2024-02-08T08:28:29,185 Downloading atlas-densities-0.2.3.tar.gz (1.3 MB) 2024-02-08T08:28:29,849 Added atlas-densities==0.2.3 from https://files.pythonhosted.org/packages/ab/8a/6fe71c5390bea9c0986738ac7216b6a7ea2719e3e68b2314dad3abd44f9b/atlas-densities-0.2.3.tar.gz to build tracker '/tmp/pip-build-tracker-zx72ug6r' 2024-02-08T08:28:29,851 Running setup.py (path:/tmp/pip-wheel-uzc5i_3a/atlas-densities_1efac6d7213e42afbb53ca6f8259fde8/setup.py) egg_info for package atlas-densities 2024-02-08T08:28:29,852 Created temporary directory: /tmp/pip-pip-egg-info-nx3uxpcv 2024-02-08T08:28:29,853 Preparing metadata (setup.py): started 2024-02-08T08:28:29,854 Running command python setup.py egg_info 2024-02-08T08:28:30,584 /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:80: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2024-02-08T08:28:30,584 !! 2024-02-08T08:28:30,585 ******************************************************************************** 2024-02-08T08:28:30,586 Requirements should be satisfied by a PEP 517 installer. 2024-02-08T08:28:30,586 If you are using pip, you can try `pip install --use-pep517`. 2024-02-08T08:28:30,586 ******************************************************************************** 2024-02-08T08:28:30,587 !! 2024-02-08T08:28:30,588 dist.fetch_build_eggs(dist.setup_requires) 2024-02-08T08:28:34,001 WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section' 2024-02-08T08:28:34,106 running egg_info 2024-02-08T08:28:34,108 creating /tmp/pip-pip-egg-info-nx3uxpcv/atlas_densities.egg-info 2024-02-08T08:28:34,134 writing /tmp/pip-pip-egg-info-nx3uxpcv/atlas_densities.egg-info/PKG-INFO 2024-02-08T08:28:34,139 writing dependency_links to /tmp/pip-pip-egg-info-nx3uxpcv/atlas_densities.egg-info/dependency_links.txt 2024-02-08T08:28:34,141 writing entry points to /tmp/pip-pip-egg-info-nx3uxpcv/atlas_densities.egg-info/entry_points.txt 2024-02-08T08:28:34,143 writing requirements to /tmp/pip-pip-egg-info-nx3uxpcv/atlas_densities.egg-info/requires.txt 2024-02-08T08:28:34,145 writing top-level names to /tmp/pip-pip-egg-info-nx3uxpcv/atlas_densities.egg-info/top_level.txt 2024-02-08T08:28:34,146 writing manifest file '/tmp/pip-pip-egg-info-nx3uxpcv/atlas_densities.egg-info/SOURCES.txt' 2024-02-08T08:28:34,316 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-02-08T08:28:34,322 reading manifest file '/tmp/pip-pip-egg-info-nx3uxpcv/atlas_densities.egg-info/SOURCES.txt' 2024-02-08T08:28:34,324 reading manifest template 'MANIFEST.in' 2024-02-08T08:28:34,351 adding license file 'LICENSE.txt' 2024-02-08T08:28:34,352 adding license file 'AUTHORS.txt' 2024-02-08T08:28:34,358 writing manifest file '/tmp/pip-pip-egg-info-nx3uxpcv/atlas_densities.egg-info/SOURCES.txt' 2024-02-08T08:28:34,472 Preparing metadata (setup.py): finished with status 'done' 2024-02-08T08:28:34,477 Source in /tmp/pip-wheel-uzc5i_3a/atlas-densities_1efac6d7213e42afbb53ca6f8259fde8 has version 0.2.3, which satisfies requirement atlas-densities==0.2.3 from https://files.pythonhosted.org/packages/ab/8a/6fe71c5390bea9c0986738ac7216b6a7ea2719e3e68b2314dad3abd44f9b/atlas-densities-0.2.3.tar.gz 2024-02-08T08:28:34,478 Removed atlas-densities==0.2.3 from https://files.pythonhosted.org/packages/ab/8a/6fe71c5390bea9c0986738ac7216b6a7ea2719e3e68b2314dad3abd44f9b/atlas-densities-0.2.3.tar.gz from build tracker '/tmp/pip-build-tracker-zx72ug6r' 2024-02-08T08:28:34,486 Created temporary directory: /tmp/pip-unpack-9g7llcgt 2024-02-08T08:28:34,487 Created temporary directory: /tmp/pip-unpack-_1koele3 2024-02-08T08:28:34,507 Building wheels for collected packages: atlas-densities 2024-02-08T08:28:34,511 Created temporary directory: /tmp/pip-wheel-4snrpnrp 2024-02-08T08:28:34,512 Building wheel for atlas-densities (setup.py): started 2024-02-08T08:28:34,513 Destination directory: /tmp/pip-wheel-4snrpnrp 2024-02-08T08:28:34,514 Running command python setup.py bdist_wheel 2024-02-08T08:28:35,201 /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:80: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2024-02-08T08:28:35,201 !! 2024-02-08T08:28:35,203 ******************************************************************************** 2024-02-08T08:28:35,203 Requirements should be satisfied by a PEP 517 installer. 2024-02-08T08:28:35,204 If you are using pip, you can try `pip install --use-pep517`. 2024-02-08T08:28:35,205 ******************************************************************************** 2024-02-08T08:28:35,206 !! 2024-02-08T08:28:35,206 dist.fetch_build_eggs(dist.setup_requires) 2024-02-08T08:28:35,733 WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section' 2024-02-08T08:28:35,831 running bdist_wheel 2024-02-08T08:28:35,940 running build 2024-02-08T08:28:35,941 running build_py 2024-02-08T08:28:35,971 creating build 2024-02-08T08:28:35,971 creating build/lib 2024-02-08T08:28:35,972 creating build/lib/tests 2024-02-08T08:28:35,973 copying tests/test_utils.py -> build/lib/tests 2024-02-08T08:28:35,976 copying tests/__init__.py -> build/lib/tests 2024-02-08T08:28:35,977 copying tests/mocking_tools.py -> build/lib/tests 2024-02-08T08:28:35,979 creating build/lib/atlas_densities 2024-02-08T08:28:35,980 copying atlas_densities/exceptions.py -> build/lib/atlas_densities 2024-02-08T08:28:35,982 copying atlas_densities/version.py -> build/lib/atlas_densities 2024-02-08T08:28:35,984 copying atlas_densities/__init__.py -> build/lib/atlas_densities 2024-02-08T08:28:35,986 copying atlas_densities/utils.py -> build/lib/atlas_densities 2024-02-08T08:28:35,988 creating build/lib/tests/combination 2024-02-08T08:28:35,989 copying tests/combination/test_markers_combinator.py -> build/lib/tests/combination 2024-02-08T08:28:35,991 copying tests/combination/__init__.py -> build/lib/tests/combination 2024-02-08T08:28:35,993 copying tests/combination/test_annotations_combinator.py -> build/lib/tests/combination 2024-02-08T08:28:35,995 creating build/lib/tests/app 2024-02-08T08:28:35,996 copying tests/app/test_combination.py -> build/lib/tests/app 2024-02-08T08:28:35,998 copying tests/app/__init__.py -> build/lib/tests/app 2024-02-08T08:28:36,000 copying tests/app/test_cell_densities.py -> build/lib/tests/app 2024-02-08T08:28:36,003 copying tests/app/test_mtype_densities.py -> build/lib/tests/app 2024-02-08T08:28:36,005 copying tests/app/test_refined_inhibitory_neuron_densities.py -> build/lib/tests/app 2024-02-08T08:28:36,008 creating build/lib/tests/densities 2024-02-08T08:28:36,009 copying tests/densities/test_utils.py -> build/lib/tests/densities 2024-02-08T08:28:36,011 copying tests/densities/test_inhibitory_neuron_densities_helper.py -> build/lib/tests/densities 2024-02-08T08:28:36,013 copying tests/densities/test_mtype_densities_from_map.py -> build/lib/tests/densities 2024-02-08T08:28:36,016 copying tests/densities/test_mtype_densities_from_composition.py -> build/lib/tests/densities 2024-02-08T08:28:36,018 copying tests/densities/test_glia_densities.py -> build/lib/tests/densities 2024-02-08T08:28:36,020 copying tests/densities/test_mtype_densities_from_profiles.py -> build/lib/tests/densities 2024-02-08T08:28:36,022 copying tests/densities/test_cell_density.py -> build/lib/tests/densities 2024-02-08T08:28:36,024 copying tests/densities/test_fitting.py -> build/lib/tests/densities 2024-02-08T08:28:36,027 copying tests/densities/test_measurement_to_density.py -> build/lib/tests/densities 2024-02-08T08:28:36,029 copying tests/densities/test_refined_inhibitory_neuron_density.py -> build/lib/tests/densities 2024-02-08T08:28:36,032 copying tests/densities/__init__.py -> build/lib/tests/densities 2024-02-08T08:28:36,033 copying tests/densities/test_excitatory_inhibitory_splitting.py -> build/lib/tests/densities 2024-02-08T08:28:36,036 copying tests/densities/test_inhibitory_neuron_density_optimization.py -> build/lib/tests/densities 2024-02-08T08:28:36,038 copying tests/densities/test_cell_counts.py -> build/lib/tests/densities 2024-02-08T08:28:36,040 copying tests/densities/test_optimization_initialization.py -> build/lib/tests/densities 2024-02-08T08:28:36,043 copying tests/densities/test_excel_reader.py -> build/lib/tests/densities 2024-02-08T08:28:36,045 copying tests/densities/test_inhibitory_neuron_density.py -> build/lib/tests/densities 2024-02-08T08:28:36,048 creating build/lib/atlas_densities/combination 2024-02-08T08:28:36,049 copying atlas_densities/combination/annotations_combinator.py -> build/lib/atlas_densities/combination 2024-02-08T08:28:36,052 copying atlas_densities/combination/__init__.py -> build/lib/atlas_densities/combination 2024-02-08T08:28:36,053 copying atlas_densities/combination/markers_combinator.py -> build/lib/atlas_densities/combination 2024-02-08T08:28:36,056 creating build/lib/atlas_densities/app 2024-02-08T08:28:36,057 copying atlas_densities/app/mtype_densities.py -> build/lib/atlas_densities/app 2024-02-08T08:28:36,059 copying atlas_densities/app/cli.py -> build/lib/atlas_densities/app 2024-02-08T08:28:36,061 copying atlas_densities/app/__init__.py -> build/lib/atlas_densities/app 2024-02-08T08:28:36,063 copying atlas_densities/app/cell_densities.py -> build/lib/atlas_densities/app 2024-02-08T08:28:36,066 copying atlas_densities/app/combination.py -> build/lib/atlas_densities/app 2024-02-08T08:28:36,068 copying atlas_densities/app/utils.py -> build/lib/atlas_densities/app 2024-02-08T08:28:36,070 creating build/lib/atlas_densities/densities 2024-02-08T08:28:36,071 copying atlas_densities/densities/inhibitory_neuron_densities_helper.py -> build/lib/atlas_densities/densities 2024-02-08T08:28:36,074 copying atlas_densities/densities/cell_density.py -> build/lib/atlas_densities/densities 2024-02-08T08:28:36,076 copying atlas_densities/densities/measurement_to_density.py -> build/lib/atlas_densities/densities 2024-02-08T08:28:36,078 copying atlas_densities/densities/__init__.py -> build/lib/atlas_densities/densities 2024-02-08T08:28:36,079 copying atlas_densities/densities/inhibitory_neuron_densities_optimization.py -> build/lib/atlas_densities/densities 2024-02-08T08:28:36,082 copying atlas_densities/densities/glia_densities.py -> build/lib/atlas_densities/densities 2024-02-08T08:28:36,084 copying atlas_densities/densities/excel_reader.py -> build/lib/atlas_densities/densities 2024-02-08T08:28:36,087 copying atlas_densities/densities/mtype_densities_from_composition.py -> build/lib/atlas_densities/densities 2024-02-08T08:28:36,089 copying atlas_densities/densities/fitting.py -> build/lib/atlas_densities/densities 2024-02-08T08:28:36,092 copying atlas_densities/densities/refined_inhibitory_neuron_densities.py -> build/lib/atlas_densities/densities 2024-02-08T08:28:36,094 copying atlas_densities/densities/mtype_densities_from_profiles.py -> build/lib/atlas_densities/densities 2024-02-08T08:28:36,097 copying atlas_densities/densities/excitatory_inhibitory_splitting.py -> build/lib/atlas_densities/densities 2024-02-08T08:28:36,099 copying atlas_densities/densities/inhibitory_neuron_density.py -> build/lib/atlas_densities/densities 2024-02-08T08:28:36,101 copying atlas_densities/densities/cell_counts.py -> build/lib/atlas_densities/densities 2024-02-08T08:28:36,103 copying atlas_densities/densities/utils.py -> build/lib/atlas_densities/densities 2024-02-08T08:28:36,106 creating build/lib/atlas_densities/app/data 2024-02-08T08:28:36,107 copying atlas_densities/app/data/__init__.py -> build/lib/atlas_densities/app/data 2024-02-08T08:28:36,109 creating build/lib/atlas_densities/densities/mtype_densities_from_map 2024-02-08T08:28:36,110 copying atlas_densities/densities/mtype_densities_from_map/__init__.py -> build/lib/atlas_densities/densities/mtype_densities_from_map 2024-02-08T08:28:36,112 copying atlas_densities/densities/mtype_densities_from_map/create.py -> build/lib/atlas_densities/densities/mtype_densities_from_map 2024-02-08T08:28:36,114 copying atlas_densities/densities/mtype_densities_from_map/utils.py -> build/lib/atlas_densities/densities/mtype_densities_from_map 2024-02-08T08:28:36,116 running egg_info 2024-02-08T08:28:36,170 writing atlas_densities.egg-info/PKG-INFO 2024-02-08T08:28:36,175 writing dependency_links to atlas_densities.egg-info/dependency_links.txt 2024-02-08T08:28:36,176 writing entry points to atlas_densities.egg-info/entry_points.txt 2024-02-08T08:28:36,178 writing requirements to atlas_densities.egg-info/requires.txt 2024-02-08T08:28:36,179 writing top-level names to atlas_densities.egg-info/top_level.txt 2024-02-08T08:28:36,280 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-02-08T08:28:36,283 reading manifest file 'atlas_densities.egg-info/SOURCES.txt' 2024-02-08T08:28:36,291 reading manifest template 'MANIFEST.in' 2024-02-08T08:28:36,316 adding license file 'LICENSE.txt' 2024-02-08T08:28:36,317 adding license file 'AUTHORS.txt' 2024-02-08T08:28:36,324 writing manifest file 'atlas_densities.egg-info/SOURCES.txt' 2024-02-08T08:28:36,327 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'atlas_densities.app.data.markers' is absent from the `packages` configuration. 2024-02-08T08:28:36,327 !! 2024-02-08T08:28:36,328 ******************************************************************************** 2024-02-08T08:28:36,329 ############################ 2024-02-08T08:28:36,329 # Package would be ignored # 2024-02-08T08:28:36,330 ############################ 2024-02-08T08:28:36,330 Python recognizes 'atlas_densities.app.data.markers' as an importable package[^1], 2024-02-08T08:28:36,331 but it is absent from setuptools' `packages` configuration. 2024-02-08T08:28:36,331 This leads to an ambiguous overall configuration. If you want to distribute this 2024-02-08T08:28:36,332 package, please make sure that 'atlas_densities.app.data.markers' is explicitly added 2024-02-08T08:28:36,332 to the `packages` configuration field. 2024-02-08T08:28:36,333 Alternatively, you can also rely on setuptools' discovery methods 2024-02-08T08:28:36,334 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-02-08T08:28:36,334 instead of `find_packages(...)`/`find:`). 2024-02-08T08:28:36,335 You can read more about "package discovery" on setuptools documentation page: 2024-02-08T08:28:36,337 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-02-08T08:28:36,338 If you don't want 'atlas_densities.app.data.markers' to be distributed and are 2024-02-08T08:28:36,338 already explicitly excluding 'atlas_densities.app.data.markers' via 2024-02-08T08:28:36,339 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-02-08T08:28:36,339 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-02-08T08:28:36,340 combination with a more fine grained `package-data` configuration. 2024-02-08T08:28:36,341 You can read more about "package data files" on setuptools documentation page: 2024-02-08T08:28:36,342 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-02-08T08:28:36,343 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-02-08T08:28:36,344 even if it does not contain any `.py` files. 2024-02-08T08:28:36,344 On the other hand, currently there is no concept of package data 2024-02-08T08:28:36,345 directory, all directories are treated like packages. 2024-02-08T08:28:36,346 ******************************************************************************** 2024-02-08T08:28:36,347 !! 2024-02-08T08:28:36,347 check.warn(importable) 2024-02-08T08:28:36,348 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'atlas_densities.app.data.measurements' is absent from the `packages` configuration. 2024-02-08T08:28:36,349 !! 2024-02-08T08:28:36,350 ******************************************************************************** 2024-02-08T08:28:36,352 ############################ 2024-02-08T08:28:36,354 # Package would be ignored # 2024-02-08T08:28:36,357 ############################ 2024-02-08T08:28:36,357 Python recognizes 'atlas_densities.app.data.measurements' as an importable package[^1], 2024-02-08T08:28:36,358 but it is absent from setuptools' `packages` configuration. 2024-02-08T08:28:36,359 This leads to an ambiguous overall configuration. If you want to distribute this 2024-02-08T08:28:36,360 package, please make sure that 'atlas_densities.app.data.measurements' is explicitly added 2024-02-08T08:28:36,361 to the `packages` configuration field. 2024-02-08T08:28:36,362 Alternatively, you can also rely on setuptools' discovery methods 2024-02-08T08:28:36,362 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-02-08T08:28:36,363 instead of `find_packages(...)`/`find:`). 2024-02-08T08:28:36,364 You can read more about "package discovery" on setuptools documentation page: 2024-02-08T08:28:36,365 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-02-08T08:28:36,366 If you don't want 'atlas_densities.app.data.measurements' to be distributed and are 2024-02-08T08:28:36,366 already explicitly excluding 'atlas_densities.app.data.measurements' via 2024-02-08T08:28:36,367 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-02-08T08:28:36,367 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-02-08T08:28:36,368 combination with a more fine grained `package-data` configuration. 2024-02-08T08:28:36,368 You can read more about "package data files" on setuptools documentation page: 2024-02-08T08:28:36,369 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-02-08T08:28:36,371 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-02-08T08:28:36,371 even if it does not contain any `.py` files. 2024-02-08T08:28:36,372 On the other hand, currently there is no concept of package data 2024-02-08T08:28:36,372 directory, all directories are treated like packages. 2024-02-08T08:28:36,373 ******************************************************************************** 2024-02-08T08:28:36,374 !! 2024-02-08T08:28:36,374 check.warn(importable) 2024-02-08T08:28:36,375 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'atlas_densities.app.data.metadata' is absent from the `packages` configuration. 2024-02-08T08:28:36,375 !! 2024-02-08T08:28:36,376 ******************************************************************************** 2024-02-08T08:28:36,377 ############################ 2024-02-08T08:28:36,377 # Package would be ignored # 2024-02-08T08:28:36,378 ############################ 2024-02-08T08:28:36,378 Python recognizes 'atlas_densities.app.data.metadata' as an importable package[^1], 2024-02-08T08:28:36,379 but it is absent from setuptools' `packages` configuration. 2024-02-08T08:28:36,380 This leads to an ambiguous overall configuration. If you want to distribute this 2024-02-08T08:28:36,380 package, please make sure that 'atlas_densities.app.data.metadata' is explicitly added 2024-02-08T08:28:36,381 to the `packages` configuration field. 2024-02-08T08:28:36,382 Alternatively, you can also rely on setuptools' discovery methods 2024-02-08T08:28:36,382 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-02-08T08:28:36,383 instead of `find_packages(...)`/`find:`). 2024-02-08T08:28:36,384 You can read more about "package discovery" on setuptools documentation page: 2024-02-08T08:28:36,385 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-02-08T08:28:36,386 If you don't want 'atlas_densities.app.data.metadata' to be distributed and are 2024-02-08T08:28:36,387 already explicitly excluding 'atlas_densities.app.data.metadata' via 2024-02-08T08:28:36,388 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-02-08T08:28:36,389 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-02-08T08:28:36,390 combination with a more fine grained `package-data` configuration. 2024-02-08T08:28:36,391 You can read more about "package data files" on setuptools documentation page: 2024-02-08T08:28:36,392 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-02-08T08:28:36,394 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-02-08T08:28:36,394 even if it does not contain any `.py` files. 2024-02-08T08:28:36,395 On the other hand, currently there is no concept of package data 2024-02-08T08:28:36,395 directory, all directories are treated like packages. 2024-02-08T08:28:36,396 ******************************************************************************** 2024-02-08T08:28:36,397 !! 2024-02-08T08:28:36,398 check.warn(importable) 2024-02-08T08:28:36,398 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'atlas_densities.app.data.mtypes' is absent from the `packages` configuration. 2024-02-08T08:28:36,399 !! 2024-02-08T08:28:36,400 ******************************************************************************** 2024-02-08T08:28:36,401 ############################ 2024-02-08T08:28:36,401 # Package would be ignored # 2024-02-08T08:28:36,402 ############################ 2024-02-08T08:28:36,402 Python recognizes 'atlas_densities.app.data.mtypes' as an importable package[^1], 2024-02-08T08:28:36,403 but it is absent from setuptools' `packages` configuration. 2024-02-08T08:28:36,404 This leads to an ambiguous overall configuration. If you want to distribute this 2024-02-08T08:28:36,405 package, please make sure that 'atlas_densities.app.data.mtypes' is explicitly added 2024-02-08T08:28:36,405 to the `packages` configuration field. 2024-02-08T08:28:36,406 Alternatively, you can also rely on setuptools' discovery methods 2024-02-08T08:28:36,407 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-02-08T08:28:36,407 instead of `find_packages(...)`/`find:`). 2024-02-08T08:28:36,408 You can read more about "package discovery" on setuptools documentation page: 2024-02-08T08:28:36,409 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-02-08T08:28:36,410 If you don't want 'atlas_densities.app.data.mtypes' to be distributed and are 2024-02-08T08:28:36,410 already explicitly excluding 'atlas_densities.app.data.mtypes' via 2024-02-08T08:28:36,411 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-02-08T08:28:36,411 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-02-08T08:28:36,412 combination with a more fine grained `package-data` configuration. 2024-02-08T08:28:36,413 You can read more about "package data files" on setuptools documentation page: 2024-02-08T08:28:36,414 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-02-08T08:28:36,415 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-02-08T08:28:36,416 even if it does not contain any `.py` files. 2024-02-08T08:28:36,417 On the other hand, currently there is no concept of package data 2024-02-08T08:28:36,417 directory, all directories are treated like packages. 2024-02-08T08:28:36,417 ******************************************************************************** 2024-02-08T08:28:36,418 !! 2024-02-08T08:28:36,419 check.warn(importable) 2024-02-08T08:28:36,419 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'atlas_densities.app.data.mtypes.composition' is absent from the `packages` configuration. 2024-02-08T08:28:36,420 !! 2024-02-08T08:28:36,421 ******************************************************************************** 2024-02-08T08:28:36,421 ############################ 2024-02-08T08:28:36,422 # Package would be ignored # 2024-02-08T08:28:36,422 ############################ 2024-02-08T08:28:36,423 Python recognizes 'atlas_densities.app.data.mtypes.composition' as an importable package[^1], 2024-02-08T08:28:36,423 but it is absent from setuptools' `packages` configuration. 2024-02-08T08:28:36,424 This leads to an ambiguous overall configuration. If you want to distribute this 2024-02-08T08:28:36,425 package, please make sure that 'atlas_densities.app.data.mtypes.composition' is explicitly added 2024-02-08T08:28:36,425 to the `packages` configuration field. 2024-02-08T08:28:36,426 Alternatively, you can also rely on setuptools' discovery methods 2024-02-08T08:28:36,426 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-02-08T08:28:36,427 instead of `find_packages(...)`/`find:`). 2024-02-08T08:28:36,428 You can read more about "package discovery" on setuptools documentation page: 2024-02-08T08:28:36,428 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-02-08T08:28:36,429 If you don't want 'atlas_densities.app.data.mtypes.composition' to be distributed and are 2024-02-08T08:28:36,430 already explicitly excluding 'atlas_densities.app.data.mtypes.composition' via 2024-02-08T08:28:36,430 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-02-08T08:28:36,431 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-02-08T08:28:36,431 combination with a more fine grained `package-data` configuration. 2024-02-08T08:28:36,433 You can read more about "package data files" on setuptools documentation page: 2024-02-08T08:28:36,434 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-02-08T08:28:36,436 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-02-08T08:28:36,436 even if it does not contain any `.py` files. 2024-02-08T08:28:36,437 On the other hand, currently there is no concept of package data 2024-02-08T08:28:36,437 directory, all directories are treated like packages. 2024-02-08T08:28:36,440 ******************************************************************************** 2024-02-08T08:28:36,443 !! 2024-02-08T08:28:36,445 check.warn(importable) 2024-02-08T08:28:36,446 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'atlas_densities.app.data.mtypes.density_profiles' is absent from the `packages` configuration. 2024-02-08T08:28:36,446 !! 2024-02-08T08:28:36,447 ******************************************************************************** 2024-02-08T08:28:36,448 ############################ 2024-02-08T08:28:36,448 # Package would be ignored # 2024-02-08T08:28:36,449 ############################ 2024-02-08T08:28:36,449 Python recognizes 'atlas_densities.app.data.mtypes.density_profiles' as an importable package[^1], 2024-02-08T08:28:36,450 but it is absent from setuptools' `packages` configuration. 2024-02-08T08:28:36,451 This leads to an ambiguous overall configuration. If you want to distribute this 2024-02-08T08:28:36,452 package, please make sure that 'atlas_densities.app.data.mtypes.density_profiles' is explicitly added 2024-02-08T08:28:36,455 to the `packages` configuration field. 2024-02-08T08:28:36,456 Alternatively, you can also rely on setuptools' discovery methods 2024-02-08T08:28:36,456 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-02-08T08:28:36,457 instead of `find_packages(...)`/`find:`). 2024-02-08T08:28:36,458 You can read more about "package discovery" on setuptools documentation page: 2024-02-08T08:28:36,459 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-02-08T08:28:36,461 If you don't want 'atlas_densities.app.data.mtypes.density_profiles' to be distributed and are 2024-02-08T08:28:36,461 already explicitly excluding 'atlas_densities.app.data.mtypes.density_profiles' via 2024-02-08T08:28:36,462 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-02-08T08:28:36,462 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-02-08T08:28:36,463 combination with a more fine grained `package-data` configuration. 2024-02-08T08:28:36,464 You can read more about "package data files" on setuptools documentation page: 2024-02-08T08:28:36,465 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-02-08T08:28:36,466 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-02-08T08:28:36,467 even if it does not contain any `.py` files. 2024-02-08T08:28:36,467 On the other hand, currently there is no concept of package data 2024-02-08T08:28:36,468 directory, all directories are treated like packages. 2024-02-08T08:28:36,468 ******************************************************************************** 2024-02-08T08:28:36,470 !! 2024-02-08T08:28:36,472 check.warn(importable) 2024-02-08T08:28:36,472 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'atlas_densities.app.data.mtypes.density_profiles.meta' is absent from the `packages` configuration. 2024-02-08T08:28:36,473 !! 2024-02-08T08:28:36,474 ******************************************************************************** 2024-02-08T08:28:36,474 ############################ 2024-02-08T08:28:36,475 # Package would be ignored # 2024-02-08T08:28:36,476 ############################ 2024-02-08T08:28:36,476 Python recognizes 'atlas_densities.app.data.mtypes.density_profiles.meta' as an importable package[^1], 2024-02-08T08:28:36,477 but it is absent from setuptools' `packages` configuration. 2024-02-08T08:28:36,478 This leads to an ambiguous overall configuration. If you want to distribute this 2024-02-08T08:28:36,478 package, please make sure that 'atlas_densities.app.data.mtypes.density_profiles.meta' is explicitly added 2024-02-08T08:28:36,479 to the `packages` configuration field. 2024-02-08T08:28:36,480 Alternatively, you can also rely on setuptools' discovery methods 2024-02-08T08:28:36,480 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-02-08T08:28:36,481 instead of `find_packages(...)`/`find:`). 2024-02-08T08:28:36,482 You can read more about "package discovery" on setuptools documentation page: 2024-02-08T08:28:36,483 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-02-08T08:28:36,484 If you don't want 'atlas_densities.app.data.mtypes.density_profiles.meta' to be distributed and are 2024-02-08T08:28:36,484 already explicitly excluding 'atlas_densities.app.data.mtypes.density_profiles.meta' via 2024-02-08T08:28:36,485 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-02-08T08:28:36,485 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-02-08T08:28:36,486 combination with a more fine grained `package-data` configuration. 2024-02-08T08:28:36,486 You can read more about "package data files" on setuptools documentation page: 2024-02-08T08:28:36,487 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-02-08T08:28:36,489 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-02-08T08:28:36,490 even if it does not contain any `.py` files. 2024-02-08T08:28:36,490 On the other hand, currently there is no concept of package data 2024-02-08T08:28:36,490 directory, all directories are treated like packages. 2024-02-08T08:28:36,491 ******************************************************************************** 2024-02-08T08:28:36,492 !! 2024-02-08T08:28:36,492 check.warn(importable) 2024-02-08T08:28:36,493 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'atlas_densities.app.data.mtypes.density_profiles.profiles' is absent from the `packages` configuration. 2024-02-08T08:28:36,493 !! 2024-02-08T08:28:36,494 ******************************************************************************** 2024-02-08T08:28:36,494 ############################ 2024-02-08T08:28:36,495 # Package would be ignored # 2024-02-08T08:28:36,495 ############################ 2024-02-08T08:28:36,496 Python recognizes 'atlas_densities.app.data.mtypes.density_profiles.profiles' as an importable package[^1], 2024-02-08T08:28:36,496 but it is absent from setuptools' `packages` configuration. 2024-02-08T08:28:36,497 This leads to an ambiguous overall configuration. If you want to distribute this 2024-02-08T08:28:36,498 package, please make sure that 'atlas_densities.app.data.mtypes.density_profiles.profiles' is explicitly added 2024-02-08T08:28:36,498 to the `packages` configuration field. 2024-02-08T08:28:36,499 Alternatively, you can also rely on setuptools' discovery methods 2024-02-08T08:28:36,499 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-02-08T08:28:36,500 instead of `find_packages(...)`/`find:`). 2024-02-08T08:28:36,501 You can read more about "package discovery" on setuptools documentation page: 2024-02-08T08:28:36,502 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-02-08T08:28:36,502 If you don't want 'atlas_densities.app.data.mtypes.density_profiles.profiles' to be distributed and are 2024-02-08T08:28:36,503 already explicitly excluding 'atlas_densities.app.data.mtypes.density_profiles.profiles' via 2024-02-08T08:28:36,503 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-02-08T08:28:36,504 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-02-08T08:28:36,505 combination with a more fine grained `package-data` configuration. 2024-02-08T08:28:36,505 You can read more about "package data files" on setuptools documentation page: 2024-02-08T08:28:36,507 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-02-08T08:28:36,508 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-02-08T08:28:36,509 even if it does not contain any `.py` files. 2024-02-08T08:28:36,509 On the other hand, currently there is no concept of package data 2024-02-08T08:28:36,510 directory, all directories are treated like packages. 2024-02-08T08:28:36,510 ******************************************************************************** 2024-02-08T08:28:36,511 !! 2024-02-08T08:28:36,512 check.warn(importable) 2024-02-08T08:28:36,512 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'atlas_densities.app.data.mtypes.probability_map' is absent from the `packages` configuration. 2024-02-08T08:28:36,513 !! 2024-02-08T08:28:36,514 ******************************************************************************** 2024-02-08T08:28:36,514 ############################ 2024-02-08T08:28:36,515 # Package would be ignored # 2024-02-08T08:28:36,515 ############################ 2024-02-08T08:28:36,516 Python recognizes 'atlas_densities.app.data.mtypes.probability_map' as an importable package[^1], 2024-02-08T08:28:36,516 but it is absent from setuptools' `packages` configuration. 2024-02-08T08:28:36,517 This leads to an ambiguous overall configuration. If you want to distribute this 2024-02-08T08:28:36,517 package, please make sure that 'atlas_densities.app.data.mtypes.probability_map' is explicitly added 2024-02-08T08:28:36,518 to the `packages` configuration field. 2024-02-08T08:28:36,518 Alternatively, you can also rely on setuptools' discovery methods 2024-02-08T08:28:36,519 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-02-08T08:28:36,519 instead of `find_packages(...)`/`find:`). 2024-02-08T08:28:36,520 You can read more about "package discovery" on setuptools documentation page: 2024-02-08T08:28:36,521 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-02-08T08:28:36,522 If you don't want 'atlas_densities.app.data.mtypes.probability_map' to be distributed and are 2024-02-08T08:28:36,523 already explicitly excluding 'atlas_densities.app.data.mtypes.probability_map' via 2024-02-08T08:28:36,523 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-02-08T08:28:36,523 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-02-08T08:28:36,524 combination with a more fine grained `package-data` configuration. 2024-02-08T08:28:36,525 You can read more about "package data files" on setuptools documentation page: 2024-02-08T08:28:36,526 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-02-08T08:28:36,527 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-02-08T08:28:36,528 even if it does not contain any `.py` files. 2024-02-08T08:28:36,528 On the other hand, currently there is no concept of package data 2024-02-08T08:28:36,529 directory, all directories are treated like packages. 2024-02-08T08:28:36,529 ******************************************************************************** 2024-02-08T08:28:36,530 !! 2024-02-08T08:28:36,531 check.warn(importable) 2024-02-08T08:28:36,531 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'tests.densities.data.meta' is absent from the `packages` configuration. 2024-02-08T08:28:36,532 !! 2024-02-08T08:28:36,533 ******************************************************************************** 2024-02-08T08:28:36,533 ############################ 2024-02-08T08:28:36,534 # Package would be ignored # 2024-02-08T08:28:36,534 ############################ 2024-02-08T08:28:36,535 Python recognizes 'tests.densities.data.meta' as an importable package[^1], 2024-02-08T08:28:36,535 but it is absent from setuptools' `packages` configuration. 2024-02-08T08:28:36,536 This leads to an ambiguous overall configuration. If you want to distribute this 2024-02-08T08:28:36,537 package, please make sure that 'tests.densities.data.meta' is explicitly added 2024-02-08T08:28:36,537 to the `packages` configuration field. 2024-02-08T08:28:36,538 Alternatively, you can also rely on setuptools' discovery methods 2024-02-08T08:28:36,538 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-02-08T08:28:36,539 instead of `find_packages(...)`/`find:`). 2024-02-08T08:28:36,540 You can read more about "package discovery" on setuptools documentation page: 2024-02-08T08:28:36,541 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-02-08T08:28:36,542 If you don't want 'tests.densities.data.meta' to be distributed and are 2024-02-08T08:28:36,543 already explicitly excluding 'tests.densities.data.meta' via 2024-02-08T08:28:36,543 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-02-08T08:28:36,544 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-02-08T08:28:36,544 combination with a more fine grained `package-data` configuration. 2024-02-08T08:28:36,545 You can read more about "package data files" on setuptools documentation page: 2024-02-08T08:28:36,546 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-02-08T08:28:36,547 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-02-08T08:28:36,547 even if it does not contain any `.py` files. 2024-02-08T08:28:36,548 On the other hand, currently there is no concept of package data 2024-02-08T08:28:36,548 directory, all directories are treated like packages. 2024-02-08T08:28:36,548 ******************************************************************************** 2024-02-08T08:28:36,549 !! 2024-02-08T08:28:36,550 check.warn(importable) 2024-02-08T08:28:36,550 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'tests.densities.data.mtypes' is absent from the `packages` configuration. 2024-02-08T08:28:36,551 !! 2024-02-08T08:28:36,551 ******************************************************************************** 2024-02-08T08:28:36,552 ############################ 2024-02-08T08:28:36,552 # Package would be ignored # 2024-02-08T08:28:36,553 ############################ 2024-02-08T08:28:36,553 Python recognizes 'tests.densities.data.mtypes' as an importable package[^1], 2024-02-08T08:28:36,553 but it is absent from setuptools' `packages` configuration. 2024-02-08T08:28:36,554 This leads to an ambiguous overall configuration. If you want to distribute this 2024-02-08T08:28:36,555 package, please make sure that 'tests.densities.data.mtypes' is explicitly added 2024-02-08T08:28:36,555 to the `packages` configuration field. 2024-02-08T08:28:36,556 Alternatively, you can also rely on setuptools' discovery methods 2024-02-08T08:28:36,557 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-02-08T08:28:36,557 instead of `find_packages(...)`/`find:`). 2024-02-08T08:28:36,558 You can read more about "package discovery" on setuptools documentation page: 2024-02-08T08:28:36,559 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-02-08T08:28:36,560 If you don't want 'tests.densities.data.mtypes' to be distributed and are 2024-02-08T08:28:36,561 already explicitly excluding 'tests.densities.data.mtypes' via 2024-02-08T08:28:36,561 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-02-08T08:28:36,562 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-02-08T08:28:36,562 combination with a more fine grained `package-data` configuration. 2024-02-08T08:28:36,563 You can read more about "package data files" on setuptools documentation page: 2024-02-08T08:28:36,564 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-02-08T08:28:36,565 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-02-08T08:28:36,566 even if it does not contain any `.py` files. 2024-02-08T08:28:36,567 On the other hand, currently there is no concept of package data 2024-02-08T08:28:36,567 directory, all directories are treated like packages. 2024-02-08T08:28:36,568 ******************************************************************************** 2024-02-08T08:28:36,569 !! 2024-02-08T08:28:36,569 check.warn(importable) 2024-02-08T08:28:36,569 copying tests/1.json -> build/lib/tests 2024-02-08T08:28:36,570 copying tests/markers_config.yaml -> build/lib/tests 2024-02-08T08:28:36,570 creating build/lib/tests/densities/data 2024-02-08T08:28:36,571 creating build/lib/tests/densities/data/meta 2024-02-08T08:28:36,571 copying tests/densities/data/meta/layers.tsv -> build/lib/tests/densities/data/meta 2024-02-08T08:28:36,571 copying tests/densities/data/meta/mapping.tsv -> build/lib/tests/densities/data/meta 2024-02-08T08:28:36,572 copying tests/densities/data/meta/mapping_exc_only.tsv -> build/lib/tests/densities/data/meta 2024-02-08T08:28:36,572 creating build/lib/tests/densities/data/mtypes 2024-02-08T08:28:36,572 copying tests/densities/data/mtypes/BP.dat -> build/lib/tests/densities/data/mtypes 2024-02-08T08:28:36,573 copying tests/densities/data/mtypes/L2_IPC.dat -> build/lib/tests/densities/data/mtypes 2024-02-08T08:28:36,573 copying tests/densities/data/mtypes/L2_TPC-A.dat -> build/lib/tests/densities/data/mtypes 2024-02-08T08:28:36,574 copying tests/densities/data/mtypes/L3_TPC-A.dat -> build/lib/tests/densities/data/mtypes 2024-02-08T08:28:36,574 copying tests/densities/data/mtypes/L3_TPC-B.dat -> build/lib/tests/densities/data/mtypes 2024-02-08T08:28:36,575 copying tests/densities/data/mtypes/mtype-taxonomy.tsv -> build/lib/tests/densities/data/mtypes 2024-02-08T08:28:36,575 copying atlas_densities/app/data/1.json -> build/lib/atlas_densities/app/data 2024-02-08T08:28:36,575 creating build/lib/atlas_densities/app/data/markers 2024-02-08T08:28:36,576 copying atlas_densities/app/data/markers/README.rst -> build/lib/atlas_densities/app/data/markers 2024-02-08T08:28:36,576 copying atlas_densities/app/data/markers/combine_markers_ccfv2_config.yaml -> build/lib/atlas_densities/app/data/markers 2024-02-08T08:28:36,577 copying atlas_densities/app/data/markers/fit_average_densities_ccfv2_config.yaml -> build/lib/atlas_densities/app/data/markers 2024-02-08T08:28:36,577 copying atlas_densities/app/data/markers/realigned_slices_bbp.json -> build/lib/atlas_densities/app/data/markers 2024-02-08T08:28:36,578 copying atlas_densities/app/data/markers/realigned_slices_ccfv2.json -> build/lib/atlas_densities/app/data/markers 2024-02-08T08:28:36,578 creating build/lib/atlas_densities/app/data/measurements 2024-02-08T08:28:36,579 copying atlas_densities/app/data/measurements/README.rst -> build/lib/atlas_densities/app/data/measurements 2024-02-08T08:28:36,579 copying atlas_densities/app/data/measurements/gaba_papers.xlsx -> build/lib/atlas_densities/app/data/measurements 2024-02-08T08:28:36,579 copying atlas_densities/app/data/measurements/homogenous_regions.csv -> build/lib/atlas_densities/app/data/measurements 2024-02-08T08:28:36,580 copying atlas_densities/app/data/measurements/measurements.csv -> build/lib/atlas_densities/app/data/measurements 2024-02-08T08:28:36,580 copying atlas_densities/app/data/measurements/mmc1.xlsx -> build/lib/atlas_densities/app/data/measurements 2024-02-08T08:28:36,581 copying atlas_densities/app/data/measurements/mmc3.xlsx -> build/lib/atlas_densities/app/data/measurements 2024-02-08T08:28:36,581 copying atlas_densities/app/data/measurements/non_density_measurements.csv -> build/lib/atlas_densities/app/data/measurements 2024-02-08T08:28:36,582 copying atlas_densities/app/data/measurements/std_cells.json -> build/lib/atlas_densities/app/data/measurements 2024-02-08T08:28:36,582 creating build/lib/atlas_densities/app/data/metadata 2024-02-08T08:28:36,583 copying atlas_densities/app/data/metadata/README.txt -> build/lib/atlas_densities/app/data/metadata 2024-02-08T08:28:36,584 copying atlas_densities/app/data/metadata/ca1_metadata.json -> build/lib/atlas_densities/app/data/metadata 2024-02-08T08:28:36,584 copying atlas_densities/app/data/metadata/excitatory-inhibitory-splitting.json -> build/lib/atlas_densities/app/data/metadata 2024-02-08T08:28:36,585 copying atlas_densities/app/data/metadata/group_ids.json -> build/lib/atlas_densities/app/data/metadata 2024-02-08T08:28:36,585 copying atlas_densities/app/data/metadata/isocortex_23_metadata.json -> build/lib/atlas_densities/app/data/metadata 2024-02-08T08:28:36,586 copying atlas_densities/app/data/metadata/isocortex_metadata.json -> build/lib/atlas_densities/app/data/metadata 2024-02-08T08:28:36,586 copying atlas_densities/app/data/metadata/metadata.json -> build/lib/atlas_densities/app/data/metadata 2024-02-08T08:28:36,587 copying atlas_densities/app/data/metadata/thalamus_metadata.json -> build/lib/atlas_densities/app/data/metadata 2024-02-08T08:28:36,587 creating build/lib/atlas_densities/app/data/mtypes 2024-02-08T08:28:36,587 copying atlas_densities/app/data/mtypes/mapping_cortex_all_to_exc_mtypes.csv -> build/lib/atlas_densities/app/data/mtypes 2024-02-08T08:28:36,588 copying atlas_densities/app/data/mtypes/mtypes_probability_map_config.yaml -> build/lib/atlas_densities/app/data/mtypes 2024-02-08T08:28:36,588 creating build/lib/atlas_densities/app/data/mtypes/composition 2024-02-08T08:28:36,589 copying atlas_densities/app/data/mtypes/composition/README.rst -> build/lib/atlas_densities/app/data/mtypes/composition 2024-02-08T08:28:36,589 copying atlas_densities/app/data/mtypes/composition/composition.yaml -> build/lib/atlas_densities/app/data/mtypes/composition 2024-02-08T08:28:36,589 copying atlas_densities/app/data/mtypes/composition/neurons-mtype-taxonomy.tsv -> build/lib/atlas_densities/app/data/mtypes/composition 2024-02-08T08:28:36,590 creating build/lib/atlas_densities/app/data/mtypes/density_profiles 2024-02-08T08:28:36,590 copying atlas_densities/app/data/mtypes/density_profiles/README.rst -> build/lib/atlas_densities/app/data/mtypes/density_profiles 2024-02-08T08:28:36,591 creating build/lib/atlas_densities/app/data/mtypes/density_profiles/meta 2024-02-08T08:28:36,591 copying atlas_densities/app/data/mtypes/density_profiles/meta/layers.tsv -> build/lib/atlas_densities/app/data/mtypes/density_profiles/meta 2024-02-08T08:28:36,592 copying atlas_densities/app/data/mtypes/density_profiles/meta/mapping.tsv -> build/lib/atlas_densities/app/data/mtypes/density_profiles/meta 2024-02-08T08:28:36,592 creating build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,593 copying atlas_densities/app/data/mtypes/density_profiles/profiles/BP.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,593 copying atlas_densities/app/data/mtypes/density_profiles/profiles/BTC.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,593 copying atlas_densities/app/data/mtypes/density_profiles/profiles/CHC.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,594 copying atlas_densities/app/data/mtypes/density_profiles/profiles/DBC.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,595 copying atlas_densities/app/data/mtypes/density_profiles/profiles/L1_DAC.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,595 copying atlas_densities/app/data/mtypes/density_profiles/profiles/L1_HAC.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,596 copying atlas_densities/app/data/mtypes/density_profiles/profiles/L1_LAC.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,596 copying atlas_densities/app/data/mtypes/density_profiles/profiles/L1_NGC-DA.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,596 copying atlas_densities/app/data/mtypes/density_profiles/profiles/L1_NGC-SA.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,597 copying atlas_densities/app/data/mtypes/density_profiles/profiles/L1_SAC.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,597 copying atlas_densities/app/data/mtypes/density_profiles/profiles/L2_IPC.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,598 copying atlas_densities/app/data/mtypes/density_profiles/profiles/L2_TPC-A.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,599 copying atlas_densities/app/data/mtypes/density_profiles/profiles/L2_TPC-B.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,599 copying atlas_densities/app/data/mtypes/density_profiles/profiles/L3_TPC-A.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,599 copying atlas_densities/app/data/mtypes/density_profiles/profiles/L3_TPC-B.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,600 copying atlas_densities/app/data/mtypes/density_profiles/profiles/L4_SSC.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,600 copying atlas_densities/app/data/mtypes/density_profiles/profiles/L4_TPC.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,600 copying atlas_densities/app/data/mtypes/density_profiles/profiles/L4_UPC.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,601 copying atlas_densities/app/data/mtypes/density_profiles/profiles/L5_TPC-C.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,601 copying atlas_densities/app/data/mtypes/density_profiles/profiles/L5_TTPC-A.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,602 copying atlas_densities/app/data/mtypes/density_profiles/profiles/L5_TTPC-B.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,602 copying atlas_densities/app/data/mtypes/density_profiles/profiles/L5_UPC.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,602 copying atlas_densities/app/data/mtypes/density_profiles/profiles/L6_BPC.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,603 copying atlas_densities/app/data/mtypes/density_profiles/profiles/L6_HPC.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,603 copying atlas_densities/app/data/mtypes/density_profiles/profiles/L6_IPC.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,604 copying atlas_densities/app/data/mtypes/density_profiles/profiles/L6_TPC-A.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,604 copying atlas_densities/app/data/mtypes/density_profiles/profiles/L6_TPC-C.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,605 copying atlas_densities/app/data/mtypes/density_profiles/profiles/L6_UPC.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,606 copying atlas_densities/app/data/mtypes/density_profiles/profiles/LBC.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,606 copying atlas_densities/app/data/mtypes/density_profiles/profiles/MC.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,607 copying atlas_densities/app/data/mtypes/density_profiles/profiles/NBC.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,607 copying atlas_densities/app/data/mtypes/density_profiles/profiles/NGC.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,608 copying atlas_densities/app/data/mtypes/density_profiles/profiles/SBC.dat -> build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,608 creating build/lib/atlas_densities/app/data/mtypes/probability_map 2024-02-08T08:28:36,609 copying atlas_densities/app/data/mtypes/probability_map/README.rst -> build/lib/atlas_densities/app/data/mtypes/probability_map 2024-02-08T08:28:36,609 copying atlas_densities/app/data/mtypes/probability_map/probability_map.csv -> build/lib/atlas_densities/app/data/mtypes/probability_map 2024-02-08T08:28:36,662 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-02-08T08:28:36,663 !! 2024-02-08T08:28:36,665 ******************************************************************************** 2024-02-08T08:28:36,666 Please avoid running ``setup.py`` directly. 2024-02-08T08:28:36,666 Instead, use pypa/build, pypa/installer or other 2024-02-08T08:28:36,667 standards-based tools. 2024-02-08T08:28:36,667 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-02-08T08:28:36,668 ******************************************************************************** 2024-02-08T08:28:36,669 !! 2024-02-08T08:28:36,669 self.initialize_options() 2024-02-08T08:28:36,690 installing to build/bdist.linux-armv7l/wheel 2024-02-08T08:28:36,690 running install 2024-02-08T08:28:36,713 running install_lib 2024-02-08T08:28:36,740 creating build/bdist.linux-armv7l 2024-02-08T08:28:36,740 creating build/bdist.linux-armv7l/wheel 2024-02-08T08:28:36,742 creating build/bdist.linux-armv7l/wheel/tests 2024-02-08T08:28:36,742 copying build/lib/tests/test_utils.py -> build/bdist.linux-armv7l/wheel/tests 2024-02-08T08:28:36,745 creating build/bdist.linux-armv7l/wheel/tests/combination 2024-02-08T08:28:36,746 copying build/lib/tests/combination/test_markers_combinator.py -> build/bdist.linux-armv7l/wheel/tests/combination 2024-02-08T08:28:36,748 copying build/lib/tests/combination/__init__.py -> build/bdist.linux-armv7l/wheel/tests/combination 2024-02-08T08:28:36,749 copying build/lib/tests/combination/test_annotations_combinator.py -> build/bdist.linux-armv7l/wheel/tests/combination 2024-02-08T08:28:36,752 copying build/lib/tests/markers_config.yaml -> build/bdist.linux-armv7l/wheel/tests 2024-02-08T08:28:36,753 copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/tests 2024-02-08T08:28:36,755 copying build/lib/tests/1.json -> build/bdist.linux-armv7l/wheel/tests 2024-02-08T08:28:36,767 creating build/bdist.linux-armv7l/wheel/tests/app 2024-02-08T08:28:36,768 copying build/lib/tests/app/test_combination.py -> build/bdist.linux-armv7l/wheel/tests/app 2024-02-08T08:28:36,770 copying build/lib/tests/app/__init__.py -> build/bdist.linux-armv7l/wheel/tests/app 2024-02-08T08:28:36,772 copying build/lib/tests/app/test_cell_densities.py -> build/bdist.linux-armv7l/wheel/tests/app 2024-02-08T08:28:36,774 copying build/lib/tests/app/test_mtype_densities.py -> build/bdist.linux-armv7l/wheel/tests/app 2024-02-08T08:28:36,777 copying build/lib/tests/app/test_refined_inhibitory_neuron_densities.py -> build/bdist.linux-armv7l/wheel/tests/app 2024-02-08T08:28:36,779 creating build/bdist.linux-armv7l/wheel/tests/densities 2024-02-08T08:28:36,780 copying build/lib/tests/densities/test_utils.py -> build/bdist.linux-armv7l/wheel/tests/densities 2024-02-08T08:28:36,782 copying build/lib/tests/densities/test_inhibitory_neuron_densities_helper.py -> build/bdist.linux-armv7l/wheel/tests/densities 2024-02-08T08:28:36,785 copying build/lib/tests/densities/test_mtype_densities_from_map.py -> build/bdist.linux-armv7l/wheel/tests/densities 2024-02-08T08:28:36,787 copying build/lib/tests/densities/test_mtype_densities_from_composition.py -> build/bdist.linux-armv7l/wheel/tests/densities 2024-02-08T08:28:36,789 copying build/lib/tests/densities/test_glia_densities.py -> build/bdist.linux-armv7l/wheel/tests/densities 2024-02-08T08:28:36,792 copying build/lib/tests/densities/test_mtype_densities_from_profiles.py -> build/bdist.linux-armv7l/wheel/tests/densities 2024-02-08T08:28:36,794 copying build/lib/tests/densities/test_cell_density.py -> build/bdist.linux-armv7l/wheel/tests/densities 2024-02-08T08:28:36,796 copying build/lib/tests/densities/test_fitting.py -> build/bdist.linux-armv7l/wheel/tests/densities 2024-02-08T08:28:36,799 copying build/lib/tests/densities/test_measurement_to_density.py -> build/bdist.linux-armv7l/wheel/tests/densities 2024-02-08T08:28:36,801 copying build/lib/tests/densities/test_refined_inhibitory_neuron_density.py -> build/bdist.linux-armv7l/wheel/tests/densities 2024-02-08T08:28:36,803 copying build/lib/tests/densities/__init__.py -> build/bdist.linux-armv7l/wheel/tests/densities 2024-02-08T08:28:36,805 copying build/lib/tests/densities/test_excitatory_inhibitory_splitting.py -> build/bdist.linux-armv7l/wheel/tests/densities 2024-02-08T08:28:36,807 copying build/lib/tests/densities/test_inhibitory_neuron_density_optimization.py -> build/bdist.linux-armv7l/wheel/tests/densities 2024-02-08T08:28:36,809 copying build/lib/tests/densities/test_cell_counts.py -> build/bdist.linux-armv7l/wheel/tests/densities 2024-02-08T08:28:36,811 creating build/bdist.linux-armv7l/wheel/tests/densities/data 2024-02-08T08:28:36,812 creating build/bdist.linux-armv7l/wheel/tests/densities/data/mtypes 2024-02-08T08:28:36,813 copying build/lib/tests/densities/data/mtypes/L3_TPC-B.dat -> build/bdist.linux-armv7l/wheel/tests/densities/data/mtypes 2024-02-08T08:28:36,815 copying build/lib/tests/densities/data/mtypes/L3_TPC-A.dat -> build/bdist.linux-armv7l/wheel/tests/densities/data/mtypes 2024-02-08T08:28:36,816 copying build/lib/tests/densities/data/mtypes/mtype-taxonomy.tsv -> build/bdist.linux-armv7l/wheel/tests/densities/data/mtypes 2024-02-08T08:28:36,818 copying build/lib/tests/densities/data/mtypes/BP.dat -> build/bdist.linux-armv7l/wheel/tests/densities/data/mtypes 2024-02-08T08:28:36,820 copying build/lib/tests/densities/data/mtypes/L2_TPC-A.dat -> build/bdist.linux-armv7l/wheel/tests/densities/data/mtypes 2024-02-08T08:28:36,821 copying build/lib/tests/densities/data/mtypes/L2_IPC.dat -> build/bdist.linux-armv7l/wheel/tests/densities/data/mtypes 2024-02-08T08:28:36,824 creating build/bdist.linux-armv7l/wheel/tests/densities/data/meta 2024-02-08T08:28:36,824 copying build/lib/tests/densities/data/meta/mapping_exc_only.tsv -> build/bdist.linux-armv7l/wheel/tests/densities/data/meta 2024-02-08T08:28:36,826 copying build/lib/tests/densities/data/meta/layers.tsv -> build/bdist.linux-armv7l/wheel/tests/densities/data/meta 2024-02-08T08:28:36,828 copying build/lib/tests/densities/data/meta/mapping.tsv -> build/bdist.linux-armv7l/wheel/tests/densities/data/meta 2024-02-08T08:28:36,830 copying build/lib/tests/densities/test_optimization_initialization.py -> build/bdist.linux-armv7l/wheel/tests/densities 2024-02-08T08:28:36,832 copying build/lib/tests/densities/test_excel_reader.py -> build/bdist.linux-armv7l/wheel/tests/densities 2024-02-08T08:28:36,834 copying build/lib/tests/densities/test_inhibitory_neuron_density.py -> build/bdist.linux-armv7l/wheel/tests/densities 2024-02-08T08:28:36,837 copying build/lib/tests/mocking_tools.py -> build/bdist.linux-armv7l/wheel/tests 2024-02-08T08:28:36,839 creating build/bdist.linux-armv7l/wheel/atlas_densities 2024-02-08T08:28:36,840 copying build/lib/atlas_densities/exceptions.py -> build/bdist.linux-armv7l/wheel/atlas_densities 2024-02-08T08:28:36,842 creating build/bdist.linux-armv7l/wheel/atlas_densities/combination 2024-02-08T08:28:36,843 copying build/lib/atlas_densities/combination/annotations_combinator.py -> build/bdist.linux-armv7l/wheel/atlas_densities/combination 2024-02-08T08:28:36,845 copying build/lib/atlas_densities/combination/__init__.py -> build/bdist.linux-armv7l/wheel/atlas_densities/combination 2024-02-08T08:28:36,847 copying build/lib/atlas_densities/combination/markers_combinator.py -> build/bdist.linux-armv7l/wheel/atlas_densities/combination 2024-02-08T08:28:36,849 copying build/lib/atlas_densities/version.py -> build/bdist.linux-armv7l/wheel/atlas_densities 2024-02-08T08:28:36,851 copying build/lib/atlas_densities/__init__.py -> build/bdist.linux-armv7l/wheel/atlas_densities 2024-02-08T08:28:36,853 creating build/bdist.linux-armv7l/wheel/atlas_densities/app 2024-02-08T08:28:36,854 copying build/lib/atlas_densities/app/mtype_densities.py -> build/bdist.linux-armv7l/wheel/atlas_densities/app 2024-02-08T08:28:36,856 copying build/lib/atlas_densities/app/cli.py -> build/bdist.linux-armv7l/wheel/atlas_densities/app 2024-02-08T08:28:36,858 copying build/lib/atlas_densities/app/__init__.py -> build/bdist.linux-armv7l/wheel/atlas_densities/app 2024-02-08T08:28:36,859 copying build/lib/atlas_densities/app/cell_densities.py -> build/bdist.linux-armv7l/wheel/atlas_densities/app 2024-02-08T08:28:36,862 copying build/lib/atlas_densities/app/combination.py -> build/bdist.linux-armv7l/wheel/atlas_densities/app 2024-02-08T08:28:36,865 creating build/bdist.linux-armv7l/wheel/atlas_densities/app/data 2024-02-08T08:28:36,866 creating build/bdist.linux-armv7l/wheel/atlas_densities/app/data/markers 2024-02-08T08:28:36,867 copying build/lib/atlas_densities/app/data/markers/realigned_slices_bbp.json -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/markers 2024-02-08T08:28:36,869 copying build/lib/atlas_densities/app/data/markers/README.rst -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/markers 2024-02-08T08:28:36,871 copying build/lib/atlas_densities/app/data/markers/realigned_slices_ccfv2.json -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/markers 2024-02-08T08:28:36,873 copying build/lib/atlas_densities/app/data/markers/combine_markers_ccfv2_config.yaml -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/markers 2024-02-08T08:28:36,875 copying build/lib/atlas_densities/app/data/markers/fit_average_densities_ccfv2_config.yaml -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/markers 2024-02-08T08:28:36,877 creating build/bdist.linux-armv7l/wheel/atlas_densities/app/data/metadata 2024-02-08T08:28:36,878 copying build/lib/atlas_densities/app/data/metadata/metadata.json -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/metadata 2024-02-08T08:28:36,879 copying build/lib/atlas_densities/app/data/metadata/README.txt -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/metadata 2024-02-08T08:28:36,881 copying build/lib/atlas_densities/app/data/metadata/isocortex_23_metadata.json -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/metadata 2024-02-08T08:28:36,883 copying build/lib/atlas_densities/app/data/metadata/group_ids.json -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/metadata 2024-02-08T08:28:36,885 copying build/lib/atlas_densities/app/data/metadata/thalamus_metadata.json -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/metadata 2024-02-08T08:28:36,886 copying build/lib/atlas_densities/app/data/metadata/ca1_metadata.json -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/metadata 2024-02-08T08:28:36,888 copying build/lib/atlas_densities/app/data/metadata/isocortex_metadata.json -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/metadata 2024-02-08T08:28:36,890 copying build/lib/atlas_densities/app/data/metadata/excitatory-inhibitory-splitting.json -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/metadata 2024-02-08T08:28:36,892 creating build/bdist.linux-armv7l/wheel/atlas_densities/app/data/measurements 2024-02-08T08:28:36,893 copying build/lib/atlas_densities/app/data/measurements/README.rst -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/measurements 2024-02-08T08:28:36,895 copying build/lib/atlas_densities/app/data/measurements/gaba_papers.xlsx -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/measurements 2024-02-08T08:28:36,898 copying build/lib/atlas_densities/app/data/measurements/non_density_measurements.csv -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/measurements 2024-02-08T08:28:36,900 copying build/lib/atlas_densities/app/data/measurements/measurements.csv -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/measurements 2024-02-08T08:28:36,914 copying build/lib/atlas_densities/app/data/measurements/mmc1.xlsx -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/measurements 2024-02-08T08:28:36,922 copying build/lib/atlas_densities/app/data/measurements/mmc3.xlsx -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/measurements 2024-02-08T08:28:36,930 copying build/lib/atlas_densities/app/data/measurements/homogenous_regions.csv -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/measurements 2024-02-08T08:28:36,932 copying build/lib/atlas_densities/app/data/measurements/std_cells.json -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/measurements 2024-02-08T08:28:36,938 creating build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes 2024-02-08T08:28:36,939 creating build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles 2024-02-08T08:28:36,940 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/README.rst -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles 2024-02-08T08:28:36,942 creating build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/meta 2024-02-08T08:28:36,943 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/meta/layers.tsv -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/meta 2024-02-08T08:28:36,945 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/meta/mapping.tsv -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/meta 2024-02-08T08:28:36,947 creating build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,948 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/LBC.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,950 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/L1_LAC.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,952 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/DBC.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,954 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/L6_BPC.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,955 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/L1_NGC-SA.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,957 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/L6_IPC.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,959 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/L6_HPC.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,961 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/L3_TPC-B.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,962 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/NBC.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,964 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/L4_SSC.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,966 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/L3_TPC-A.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,967 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/MC.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,969 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/L6_UPC.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,971 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/L2_TPC-B.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,973 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/L5_TTPC-B.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,974 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/L6_TPC-A.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,976 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/BP.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,977 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/L6_TPC-C.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,979 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/L2_TPC-A.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,981 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/L1_DAC.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,982 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/CHC.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,984 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/L5_TPC-C.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,986 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/BTC.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,988 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/L4_UPC.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,989 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/L5_TTPC-A.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,991 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/L1_HAC.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,993 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/L1_NGC-DA.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,994 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/NGC.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,996 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/SBC.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,998 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/L1_SAC.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:36,999 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/L2_IPC.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:37,001 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/L5_UPC.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:37,003 copying build/lib/atlas_densities/app/data/mtypes/density_profiles/profiles/L4_TPC.dat -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/density_profiles/profiles 2024-02-08T08:28:37,005 creating build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/composition 2024-02-08T08:28:37,006 copying build/lib/atlas_densities/app/data/mtypes/composition/composition.yaml -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/composition 2024-02-08T08:28:37,008 copying build/lib/atlas_densities/app/data/mtypes/composition/README.rst -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/composition 2024-02-08T08:28:37,010 copying build/lib/atlas_densities/app/data/mtypes/composition/neurons-mtype-taxonomy.tsv -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/composition 2024-02-08T08:28:37,012 copying build/lib/atlas_densities/app/data/mtypes/mapping_cortex_all_to_exc_mtypes.csv -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes 2024-02-08T08:28:37,014 creating build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/probability_map 2024-02-08T08:28:37,015 copying build/lib/atlas_densities/app/data/mtypes/probability_map/probability_map.csv -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/probability_map 2024-02-08T08:28:37,031 copying build/lib/atlas_densities/app/data/mtypes/probability_map/README.rst -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes/probability_map 2024-02-08T08:28:37,033 copying build/lib/atlas_densities/app/data/mtypes/mtypes_probability_map_config.yaml -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data/mtypes 2024-02-08T08:28:37,035 copying build/lib/atlas_densities/app/data/__init__.py -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data 2024-02-08T08:28:37,037 copying build/lib/atlas_densities/app/data/1.json -> build/bdist.linux-armv7l/wheel/atlas_densities/app/data 2024-02-08T08:28:37,048 copying build/lib/atlas_densities/app/utils.py -> build/bdist.linux-armv7l/wheel/atlas_densities/app 2024-02-08T08:28:37,051 creating build/bdist.linux-armv7l/wheel/atlas_densities/densities 2024-02-08T08:28:37,052 copying build/lib/atlas_densities/densities/inhibitory_neuron_densities_helper.py -> build/bdist.linux-armv7l/wheel/atlas_densities/densities 2024-02-08T08:28:37,054 copying build/lib/atlas_densities/densities/cell_density.py -> build/bdist.linux-armv7l/wheel/atlas_densities/densities 2024-02-08T08:28:37,056 copying build/lib/atlas_densities/densities/measurement_to_density.py -> build/bdist.linux-armv7l/wheel/atlas_densities/densities 2024-02-08T08:28:37,059 copying build/lib/atlas_densities/densities/__init__.py -> build/bdist.linux-armv7l/wheel/atlas_densities/densities 2024-02-08T08:28:37,061 copying build/lib/atlas_densities/densities/inhibitory_neuron_densities_optimization.py -> build/bdist.linux-armv7l/wheel/atlas_densities/densities 2024-02-08T08:28:37,063 copying build/lib/atlas_densities/densities/glia_densities.py -> build/bdist.linux-armv7l/wheel/atlas_densities/densities 2024-02-08T08:28:37,066 copying build/lib/atlas_densities/densities/excel_reader.py -> build/bdist.linux-armv7l/wheel/atlas_densities/densities 2024-02-08T08:28:37,069 copying build/lib/atlas_densities/densities/mtype_densities_from_composition.py -> build/bdist.linux-armv7l/wheel/atlas_densities/densities 2024-02-08T08:28:37,071 copying build/lib/atlas_densities/densities/fitting.py -> build/bdist.linux-armv7l/wheel/atlas_densities/densities 2024-02-08T08:28:37,074 copying build/lib/atlas_densities/densities/refined_inhibitory_neuron_densities.py -> build/bdist.linux-armv7l/wheel/atlas_densities/densities 2024-02-08T08:28:37,077 copying build/lib/atlas_densities/densities/mtype_densities_from_profiles.py -> build/bdist.linux-armv7l/wheel/atlas_densities/densities 2024-02-08T08:28:37,080 copying build/lib/atlas_densities/densities/excitatory_inhibitory_splitting.py -> build/bdist.linux-armv7l/wheel/atlas_densities/densities 2024-02-08T08:28:37,082 copying build/lib/atlas_densities/densities/inhibitory_neuron_density.py -> build/bdist.linux-armv7l/wheel/atlas_densities/densities 2024-02-08T08:28:37,085 creating build/bdist.linux-armv7l/wheel/atlas_densities/densities/mtype_densities_from_map 2024-02-08T08:28:37,086 copying build/lib/atlas_densities/densities/mtype_densities_from_map/__init__.py -> build/bdist.linux-armv7l/wheel/atlas_densities/densities/mtype_densities_from_map 2024-02-08T08:28:37,088 copying build/lib/atlas_densities/densities/mtype_densities_from_map/create.py -> build/bdist.linux-armv7l/wheel/atlas_densities/densities/mtype_densities_from_map 2024-02-08T08:28:37,090 copying build/lib/atlas_densities/densities/mtype_densities_from_map/utils.py -> build/bdist.linux-armv7l/wheel/atlas_densities/densities/mtype_densities_from_map 2024-02-08T08:28:37,093 copying build/lib/atlas_densities/densities/cell_counts.py -> build/bdist.linux-armv7l/wheel/atlas_densities/densities 2024-02-08T08:28:37,095 copying build/lib/atlas_densities/densities/utils.py -> build/bdist.linux-armv7l/wheel/atlas_densities/densities 2024-02-08T08:28:37,098 copying build/lib/atlas_densities/utils.py -> build/bdist.linux-armv7l/wheel/atlas_densities 2024-02-08T08:28:37,100 running install_egg_info 2024-02-08T08:28:37,133 Copying atlas_densities.egg-info to build/bdist.linux-armv7l/wheel/atlas_densities-0.2.3-py3.11.egg-info 2024-02-08T08:28:37,150 running install_scripts 2024-02-08T08:28:37,172 creating build/bdist.linux-armv7l/wheel/atlas_densities-0.2.3.dist-info/WHEEL 2024-02-08T08:28:37,175 creating '/tmp/pip-wheel-4snrpnrp/atlas_densities-0.2.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-02-08T08:28:37,178 adding 'atlas_densities/__init__.py' 2024-02-08T08:28:37,179 adding 'atlas_densities/exceptions.py' 2024-02-08T08:28:37,182 adding 'atlas_densities/utils.py' 2024-02-08T08:28:37,183 adding 'atlas_densities/version.py' 2024-02-08T08:28:37,185 adding 'atlas_densities/app/__init__.py' 2024-02-08T08:28:37,191 adding 'atlas_densities/app/cell_densities.py' 2024-02-08T08:28:37,193 adding 'atlas_densities/app/cli.py' 2024-02-08T08:28:37,195 adding 'atlas_densities/app/combination.py' 2024-02-08T08:28:37,198 adding 'atlas_densities/app/mtype_densities.py' 2024-02-08T08:28:37,200 adding 'atlas_densities/app/utils.py' 2024-02-08T08:28:37,229 adding 'atlas_densities/app/data/1.json' 2024-02-08T08:28:37,234 adding 'atlas_densities/app/data/__init__.py' 2024-02-08T08:28:37,237 adding 'atlas_densities/app/data/markers/README.rst' 2024-02-08T08:28:37,238 adding 'atlas_densities/app/data/markers/combine_markers_ccfv2_config.yaml' 2024-02-08T08:28:37,240 adding 'atlas_densities/app/data/markers/fit_average_densities_ccfv2_config.yaml' 2024-02-08T08:28:37,242 adding 'atlas_densities/app/data/markers/realigned_slices_bbp.json' 2024-02-08T08:28:37,243 adding 'atlas_densities/app/data/markers/realigned_slices_ccfv2.json' 2024-02-08T08:28:37,246 adding 'atlas_densities/app/data/measurements/README.rst' 2024-02-08T08:28:37,252 adding 'atlas_densities/app/data/measurements/gaba_papers.xlsx' 2024-02-08T08:28:37,255 adding 'atlas_densities/app/data/measurements/homogenous_regions.csv' 2024-02-08T08:28:37,296 adding 'atlas_densities/app/data/measurements/measurements.csv' 2024-02-08T08:28:37,343 adding 'atlas_densities/app/data/measurements/mmc1.xlsx' 2024-02-08T08:28:37,382 adding 'atlas_densities/app/data/measurements/mmc3.xlsx' 2024-02-08T08:28:37,386 adding 'atlas_densities/app/data/measurements/non_density_measurements.csv' 2024-02-08T08:28:37,400 adding 'atlas_densities/app/data/measurements/std_cells.json' 2024-02-08T08:28:37,403 adding 'atlas_densities/app/data/metadata/README.txt' 2024-02-08T08:28:37,405 adding 'atlas_densities/app/data/metadata/ca1_metadata.json' 2024-02-08T08:28:37,407 adding 'atlas_densities/app/data/metadata/excitatory-inhibitory-splitting.json' 2024-02-08T08:28:37,408 adding 'atlas_densities/app/data/metadata/group_ids.json' 2024-02-08T08:28:37,410 adding 'atlas_densities/app/data/metadata/isocortex_23_metadata.json' 2024-02-08T08:28:37,412 adding 'atlas_densities/app/data/metadata/isocortex_metadata.json' 2024-02-08T08:28:37,413 adding 'atlas_densities/app/data/metadata/metadata.json' 2024-02-08T08:28:37,415 adding 'atlas_densities/app/data/metadata/thalamus_metadata.json' 2024-02-08T08:28:37,417 adding 'atlas_densities/app/data/mtypes/mapping_cortex_all_to_exc_mtypes.csv' 2024-02-08T08:28:37,418 adding 'atlas_densities/app/data/mtypes/mtypes_probability_map_config.yaml' 2024-02-08T08:28:37,420 adding 'atlas_densities/app/data/mtypes/composition/README.rst' 2024-02-08T08:28:37,422 adding 'atlas_densities/app/data/mtypes/composition/composition.yaml' 2024-02-08T08:28:37,424 adding 'atlas_densities/app/data/mtypes/composition/neurons-mtype-taxonomy.tsv' 2024-02-08T08:28:37,426 adding 'atlas_densities/app/data/mtypes/density_profiles/README.rst' 2024-02-08T08:28:37,428 adding 'atlas_densities/app/data/mtypes/density_profiles/meta/layers.tsv' 2024-02-08T08:28:37,429 adding 'atlas_densities/app/data/mtypes/density_profiles/meta/mapping.tsv' 2024-02-08T08:28:37,432 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/BP.dat' 2024-02-08T08:28:37,433 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/BTC.dat' 2024-02-08T08:28:37,435 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/CHC.dat' 2024-02-08T08:28:37,437 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/DBC.dat' 2024-02-08T08:28:37,438 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/L1_DAC.dat' 2024-02-08T08:28:37,440 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/L1_HAC.dat' 2024-02-08T08:28:37,441 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/L1_LAC.dat' 2024-02-08T08:28:37,443 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/L1_NGC-DA.dat' 2024-02-08T08:28:37,444 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/L1_NGC-SA.dat' 2024-02-08T08:28:37,446 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/L1_SAC.dat' 2024-02-08T08:28:37,447 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/L2_IPC.dat' 2024-02-08T08:28:37,449 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/L2_TPC-A.dat' 2024-02-08T08:28:37,451 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/L2_TPC-B.dat' 2024-02-08T08:28:37,452 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/L3_TPC-A.dat' 2024-02-08T08:28:37,454 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/L3_TPC-B.dat' 2024-02-08T08:28:37,455 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/L4_SSC.dat' 2024-02-08T08:28:37,457 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/L4_TPC.dat' 2024-02-08T08:28:37,458 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/L4_UPC.dat' 2024-02-08T08:28:37,459 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/L5_TPC-C.dat' 2024-02-08T08:28:37,460 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/L5_TTPC-A.dat' 2024-02-08T08:28:37,461 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/L5_TTPC-B.dat' 2024-02-08T08:28:37,462 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/L5_UPC.dat' 2024-02-08T08:28:37,464 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/L6_BPC.dat' 2024-02-08T08:28:37,465 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/L6_HPC.dat' 2024-02-08T08:28:37,466 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/L6_IPC.dat' 2024-02-08T08:28:37,467 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/L6_TPC-A.dat' 2024-02-08T08:28:37,468 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/L6_TPC-C.dat' 2024-02-08T08:28:37,470 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/L6_UPC.dat' 2024-02-08T08:28:37,471 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/LBC.dat' 2024-02-08T08:28:37,472 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/MC.dat' 2024-02-08T08:28:37,473 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/NBC.dat' 2024-02-08T08:28:37,474 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/NGC.dat' 2024-02-08T08:28:37,476 adding 'atlas_densities/app/data/mtypes/density_profiles/profiles/SBC.dat' 2024-02-08T08:28:37,477 adding 'atlas_densities/app/data/mtypes/probability_map/README.rst' 2024-02-08T08:28:37,502 adding 'atlas_densities/app/data/mtypes/probability_map/probability_map.csv' 2024-02-08T08:28:37,509 adding 'atlas_densities/combination/__init__.py' 2024-02-08T08:28:37,510 adding 'atlas_densities/combination/annotations_combinator.py' 2024-02-08T08:28:37,512 adding 'atlas_densities/combination/markers_combinator.py' 2024-02-08T08:28:37,514 adding 'atlas_densities/densities/__init__.py' 2024-02-08T08:28:37,516 adding 'atlas_densities/densities/cell_counts.py' 2024-02-08T08:28:37,517 adding 'atlas_densities/densities/cell_density.py' 2024-02-08T08:28:37,520 adding 'atlas_densities/densities/excel_reader.py' 2024-02-08T08:28:37,522 adding 'atlas_densities/densities/excitatory_inhibitory_splitting.py' 2024-02-08T08:28:37,526 adding 'atlas_densities/densities/fitting.py' 2024-02-08T08:28:37,527 adding 'atlas_densities/densities/glia_densities.py' 2024-02-08T08:28:37,529 adding 'atlas_densities/densities/inhibitory_neuron_densities_helper.py' 2024-02-08T08:28:37,533 adding 'atlas_densities/densities/inhibitory_neuron_densities_optimization.py' 2024-02-08T08:28:37,535 adding 'atlas_densities/densities/inhibitory_neuron_density.py' 2024-02-08T08:28:37,538 adding 'atlas_densities/densities/measurement_to_density.py' 2024-02-08T08:28:37,539 adding 'atlas_densities/densities/mtype_densities_from_composition.py' 2024-02-08T08:28:37,542 adding 'atlas_densities/densities/mtype_densities_from_profiles.py' 2024-02-08T08:28:37,545 adding 'atlas_densities/densities/refined_inhibitory_neuron_densities.py' 2024-02-08T08:28:37,548 adding 'atlas_densities/densities/utils.py' 2024-02-08T08:28:37,550 adding 'atlas_densities/densities/mtype_densities_from_map/__init__.py' 2024-02-08T08:28:37,552 adding 'atlas_densities/densities/mtype_densities_from_map/create.py' 2024-02-08T08:28:37,553 adding 'atlas_densities/densities/mtype_densities_from_map/utils.py' 2024-02-08T08:28:37,583 adding 'tests/1.json' 2024-02-08T08:28:37,588 adding 'tests/__init__.py' 2024-02-08T08:28:37,589 adding 'tests/markers_config.yaml' 2024-02-08T08:28:37,591 adding 'tests/mocking_tools.py' 2024-02-08T08:28:37,592 adding 'tests/test_utils.py' 2024-02-08T08:28:37,594 adding 'tests/app/__init__.py' 2024-02-08T08:28:37,597 adding 'tests/app/test_cell_densities.py' 2024-02-08T08:28:37,598 adding 'tests/app/test_combination.py' 2024-02-08T08:28:37,600 adding 'tests/app/test_mtype_densities.py' 2024-02-08T08:28:37,602 adding 'tests/app/test_refined_inhibitory_neuron_densities.py' 2024-02-08T08:28:37,603 adding 'tests/combination/__init__.py' 2024-02-08T08:28:37,605 adding 'tests/combination/test_annotations_combinator.py' 2024-02-08T08:28:37,606 adding 'tests/combination/test_markers_combinator.py' 2024-02-08T08:28:37,608 adding 'tests/densities/__init__.py' 2024-02-08T08:28:37,609 adding 'tests/densities/test_cell_counts.py' 2024-02-08T08:28:37,611 adding 'tests/densities/test_cell_density.py' 2024-02-08T08:28:37,613 adding 'tests/densities/test_excel_reader.py' 2024-02-08T08:28:37,615 adding 'tests/densities/test_excitatory_inhibitory_splitting.py' 2024-02-08T08:28:37,617 adding 'tests/densities/test_fitting.py' 2024-02-08T08:28:37,618 adding 'tests/densities/test_glia_densities.py' 2024-02-08T08:28:37,620 adding 'tests/densities/test_inhibitory_neuron_densities_helper.py' 2024-02-08T08:28:37,621 adding 'tests/densities/test_inhibitory_neuron_density.py' 2024-02-08T08:28:37,623 adding 'tests/densities/test_inhibitory_neuron_density_optimization.py' 2024-02-08T08:28:37,625 adding 'tests/densities/test_measurement_to_density.py' 2024-02-08T08:28:37,627 adding 'tests/densities/test_mtype_densities_from_composition.py' 2024-02-08T08:28:37,628 adding 'tests/densities/test_mtype_densities_from_map.py' 2024-02-08T08:28:37,630 adding 'tests/densities/test_mtype_densities_from_profiles.py' 2024-02-08T08:28:37,632 adding 'tests/densities/test_optimization_initialization.py' 2024-02-08T08:28:37,635 adding 'tests/densities/test_refined_inhibitory_neuron_density.py' 2024-02-08T08:28:37,637 adding 'tests/densities/test_utils.py' 2024-02-08T08:28:37,639 adding 'tests/densities/data/meta/layers.tsv' 2024-02-08T08:28:37,640 adding 'tests/densities/data/meta/mapping.tsv' 2024-02-08T08:28:37,641 adding 'tests/densities/data/meta/mapping_exc_only.tsv' 2024-02-08T08:28:37,643 adding 'tests/densities/data/mtypes/BP.dat' 2024-02-08T08:28:37,644 adding 'tests/densities/data/mtypes/L2_IPC.dat' 2024-02-08T08:28:37,645 adding 'tests/densities/data/mtypes/L2_TPC-A.dat' 2024-02-08T08:28:37,646 adding 'tests/densities/data/mtypes/L3_TPC-A.dat' 2024-02-08T08:28:37,647 adding 'tests/densities/data/mtypes/L3_TPC-B.dat' 2024-02-08T08:28:37,648 adding 'tests/densities/data/mtypes/mtype-taxonomy.tsv' 2024-02-08T08:28:37,649 adding 'atlas_densities-0.2.3.dist-info/AUTHORS.txt' 2024-02-08T08:28:37,651 adding 'atlas_densities-0.2.3.dist-info/LICENSE.txt' 2024-02-08T08:28:37,654 adding 'atlas_densities-0.2.3.dist-info/METADATA' 2024-02-08T08:28:37,655 adding 'atlas_densities-0.2.3.dist-info/WHEEL' 2024-02-08T08:28:37,656 adding 'atlas_densities-0.2.3.dist-info/entry_points.txt' 2024-02-08T08:28:37,657 adding 'atlas_densities-0.2.3.dist-info/top_level.txt' 2024-02-08T08:28:37,659 adding 'atlas_densities-0.2.3.dist-info/RECORD' 2024-02-08T08:28:37,676 removing build/bdist.linux-armv7l/wheel 2024-02-08T08:28:37,827 Building wheel for atlas-densities (setup.py): finished with status 'done' 2024-02-08T08:28:37,840 Created wheel for atlas-densities: filename=atlas_densities-0.2.3-py3-none-any.whl size=1073033 sha256=12c86c3b2dd7f0853e20bd64def407cf9e52a465208037f252dd544f2de8e33b 2024-02-08T08:28:37,841 Stored in directory: /tmp/pip-ephem-wheel-cache-k9s94ftv/wheels/39/bf/5b/dc7e47c3ed0cee6577ae4506e2805aee26a83bfad4fb7e2121 2024-02-08T08:28:37,859 Successfully built atlas-densities 2024-02-08T08:28:37,896 Removed build tracker: '/tmp/pip-build-tracker-zx72ug6r'