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https://www.piwheels.org/simple/galaxy-tool-util/galaxy_tool_util-19.9.0.dev2-py2.py3-none-any.whl#sha256=62e79b75dc27fa398c1e33a336b253d18de3fc94880fe567b3ee01fd081c6d5c (from https://www.piwheels.org/simple/galaxy-tool-util/) 2024-02-12T20:17:00,336 Skipping link: No binaries permitted for galaxy-tool-util: https://www.piwheels.org/simple/galaxy-tool-util/galaxy_tool_util-19.9.0.dev1-py2.py3-none-any.whl#sha256=7ff286949cb2c87a462ef1360b4ff58a3d0fc953dfde646f2b23bc9438d63ada (from https://www.piwheels.org/simple/galaxy-tool-util/) 2024-02-12T20:17:00,337 Skipping link: No binaries permitted for galaxy-tool-util: https://www.piwheels.org/simple/galaxy-tool-util/galaxy_tool_util-19.9.0.dev0-py3-none-any.whl#sha256=f3257799e554be8d31f640710ed8672994323cbfda020a3648775c6d156fad4a (from https://www.piwheels.org/simple/galaxy-tool-util/) 2024-02-12T20:17:00,338 Skipping link: not a file: https://www.piwheels.org/simple/galaxy-tool-util/ 2024-02-12T20:17:00,338 Skipping link: not a file: https://pypi.org/simple/galaxy-tool-util/ 2024-02-12T20:17:00,364 Given no hashes to check 1 links for project 'galaxy-tool-util': discarding no candidates 2024-02-12T20:17:00,382 Collecting galaxy-tool-util==23.1.dev0 2024-02-12T20:17:00,384 Created temporary directory: /tmp/pip-unpack-bxly8762 2024-02-12T20:17:00,597 Downloading galaxy-tool-util-23.1.dev0.tar.gz (342 kB) 2024-02-12T20:17:00,980 Added galaxy-tool-util==23.1.dev0 from https://files.pythonhosted.org/packages/1c/87/e66af6ec981d8156b7db39258cbfc4007026743050c42782c4c8d2b808fe/galaxy-tool-util-23.1.dev0.tar.gz to build tracker '/tmp/pip-build-tracker-eubeaz2a' 2024-02-12T20:17:00,983 Created temporary directory: /tmp/pip-build-env-560gwl4f 2024-02-12T20:17:00,988 Installing build dependencies: started 2024-02-12T20:17:00,989 Running command pip subprocess to install build dependencies 2024-02-12T20:17:02,134 Using pip 23.3.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-02-12T20:17:02,655 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-02-12T20:17:04,078 Collecting setuptools 2024-02-12T20:17:04,093 Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.1.0-py3-none-any.whl (819 kB) 2024-02-12T20:17:06,719 Installing collected packages: setuptools 2024-02-12T20:17:08,949 Successfully installed setuptools-69.1.0 2024-02-12T20:17:09,221 [notice] A new release of pip is available: 23.3.1 -> 24.0 2024-02-12T20:17:09,222 [notice] To update, run: python3 -m pip install --upgrade pip 2024-02-12T20:17:09,483 Installing build dependencies: finished with status 'done' 2024-02-12T20:17:09,486 Getting requirements to build wheel: started 2024-02-12T20:17:09,487 Running command Getting requirements to build wheel 2024-02-12T20:17:10,075 running egg_info 2024-02-12T20:17:10,078 writing galaxy_tool_util.egg-info/PKG-INFO 2024-02-12T20:17:10,083 writing dependency_links to galaxy_tool_util.egg-info/dependency_links.txt 2024-02-12T20:17:10,086 writing entry points to galaxy_tool_util.egg-info/entry_points.txt 2024-02-12T20:17:10,088 writing requirements to galaxy_tool_util.egg-info/requires.txt 2024-02-12T20:17:10,089 writing top-level names to galaxy_tool_util.egg-info/top_level.txt 2024-02-12T20:17:10,130 reading manifest file 'galaxy_tool_util.egg-info/SOURCES.txt' 2024-02-12T20:17:10,135 reading manifest template 'MANIFEST.in' 2024-02-12T20:17:10,140 adding license file 'LICENSE' 2024-02-12T20:17:10,147 writing manifest file 'galaxy_tool_util.egg-info/SOURCES.txt' 2024-02-12T20:17:10,224 Getting requirements to build wheel: finished with status 'done' 2024-02-12T20:17:10,231 Installing backend dependencies: started 2024-02-12T20:17:10,233 Running command pip subprocess to install backend dependencies 2024-02-12T20:17:11,376 Using pip 23.3.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-02-12T20:17:11,893 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-02-12T20:17:12,373 Collecting wheel 2024-02-12T20:17:12,386 Using cached https://www.piwheels.org/simple/wheel/wheel-0.42.0-py3-none-any.whl (65 kB) 2024-02-12T20:17:14,637 Installing collected packages: wheel 2024-02-12T20:17:14,855 Creating /tmp/pip-build-env-560gwl4f/normal/local/bin 2024-02-12T20:17:14,857 changing mode of /tmp/pip-build-env-560gwl4f/normal/local/bin/wheel to 755 2024-02-12T20:17:14,868 Successfully installed wheel-0.42.0 2024-02-12T20:17:15,145 [notice] A new release of pip is available: 23.3.1 -> 24.0 2024-02-12T20:17:15,145 [notice] To update, run: python3 -m pip install --upgrade pip 2024-02-12T20:17:15,372 Installing backend dependencies: finished with status 'done' 2024-02-12T20:17:15,374 Created temporary directory: /tmp/pip-modern-metadata-_fdhg01c 2024-02-12T20:17:15,376 Preparing metadata (pyproject.toml): started 2024-02-12T20:17:15,377 Running command Preparing metadata (pyproject.toml) 2024-02-12T20:17:15,906 running dist_info 2024-02-12T20:17:15,925 creating /tmp/pip-modern-metadata-_fdhg01c/galaxy_tool_util.egg-info 2024-02-12T20:17:15,928 writing /tmp/pip-modern-metadata-_fdhg01c/galaxy_tool_util.egg-info/PKG-INFO 2024-02-12T20:17:15,933 writing dependency_links to /tmp/pip-modern-metadata-_fdhg01c/galaxy_tool_util.egg-info/dependency_links.txt 2024-02-12T20:17:15,935 writing entry points to /tmp/pip-modern-metadata-_fdhg01c/galaxy_tool_util.egg-info/entry_points.txt 2024-02-12T20:17:15,938 writing requirements to /tmp/pip-modern-metadata-_fdhg01c/galaxy_tool_util.egg-info/requires.txt 2024-02-12T20:17:15,939 writing top-level names to /tmp/pip-modern-metadata-_fdhg01c/galaxy_tool_util.egg-info/top_level.txt 2024-02-12T20:17:15,940 writing manifest file '/tmp/pip-modern-metadata-_fdhg01c/galaxy_tool_util.egg-info/SOURCES.txt' 2024-02-12T20:17:15,978 reading manifest file '/tmp/pip-modern-metadata-_fdhg01c/galaxy_tool_util.egg-info/SOURCES.txt' 2024-02-12T20:17:15,980 reading manifest template 'MANIFEST.in' 2024-02-12T20:17:15,985 adding license file 'LICENSE' 2024-02-12T20:17:16,007 writing manifest file '/tmp/pip-modern-metadata-_fdhg01c/galaxy_tool_util.egg-info/SOURCES.txt' 2024-02-12T20:17:16,008 creating '/tmp/pip-modern-metadata-_fdhg01c/galaxy_tool_util-23.1.dev0.dist-info' 2024-02-12T20:17:16,192 Preparing metadata (pyproject.toml): finished with status 'done' 2024-02-12T20:17:16,197 Source in /tmp/pip-wheel-z0px06jt/galaxy-tool-util_98471f57ca2a49c5995d1fadae6eb028 has version 23.1.dev0, which satisfies requirement galaxy-tool-util==23.1.dev0 from https://files.pythonhosted.org/packages/1c/87/e66af6ec981d8156b7db39258cbfc4007026743050c42782c4c8d2b808fe/galaxy-tool-util-23.1.dev0.tar.gz 2024-02-12T20:17:16,198 Removed galaxy-tool-util==23.1.dev0 from https://files.pythonhosted.org/packages/1c/87/e66af6ec981d8156b7db39258cbfc4007026743050c42782c4c8d2b808fe/galaxy-tool-util-23.1.dev0.tar.gz from build tracker '/tmp/pip-build-tracker-eubeaz2a' 2024-02-12T20:17:16,204 Created temporary directory: /tmp/pip-unpack-dwqnqogp 2024-02-12T20:17:16,205 Created temporary directory: /tmp/pip-unpack-0ujeezl_ 2024-02-12T20:17:16,232 Building wheels for collected packages: galaxy-tool-util 2024-02-12T20:17:16,236 Created temporary directory: /tmp/pip-wheel-ire2udv3 2024-02-12T20:17:16,236 Destination directory: /tmp/pip-wheel-ire2udv3 2024-02-12T20:17:16,238 Building wheel for galaxy-tool-util (pyproject.toml): started 2024-02-12T20:17:16,240 Running command Building wheel for galaxy-tool-util (pyproject.toml) 2024-02-12T20:17:16,805 running bdist_wheel 2024-02-12T20:17:16,846 running build 2024-02-12T20:17:16,847 running build_py 2024-02-12T20:17:16,853 creating build 2024-02-12T20:17:16,854 creating build/lib 2024-02-12T20:17:16,855 creating build/lib/galaxy 2024-02-12T20:17:16,856 copying galaxy/__init__.py -> build/lib/galaxy 2024-02-12T20:17:16,859 creating build/lib/galaxy/tool_util 2024-02-12T20:17:16,860 copying galaxy/tool_util/version.py -> build/lib/galaxy/tool_util 2024-02-12T20:17:16,862 copying galaxy/tool_util/lint.py -> build/lib/galaxy/tool_util 2024-02-12T20:17:16,865 copying galaxy/tool_util/edam_util.py -> build/lib/galaxy/tool_util 2024-02-12T20:17:16,867 copying galaxy/tool_util/output_checker.py -> build/lib/galaxy/tool_util 2024-02-12T20:17:16,869 copying galaxy/tool_util/fetcher.py -> build/lib/galaxy/tool_util 2024-02-12T20:17:16,871 copying galaxy/tool_util/loader_directory.py -> build/lib/galaxy/tool_util 2024-02-12T20:17:16,873 copying galaxy/tool_util/provided_metadata.py -> build/lib/galaxy/tool_util 2024-02-12T20:17:16,875 copying galaxy/tool_util/loader.py -> build/lib/galaxy/tool_util 2024-02-12T20:17:16,877 copying galaxy/tool_util/__init__.py -> build/lib/galaxy/tool_util 2024-02-12T20:17:16,879 creating build/lib/galaxy/tool_util/deps 2024-02-12T20:17:16,880 copying galaxy/tool_util/deps/dockerfiles.py -> build/lib/galaxy/tool_util/deps 2024-02-12T20:17:16,882 copying galaxy/tool_util/deps/container_classes.py -> build/lib/galaxy/tool_util/deps 2024-02-12T20:17:16,884 copying galaxy/tool_util/deps/containers.py -> build/lib/galaxy/tool_util/deps 2024-02-12T20:17:16,886 copying galaxy/tool_util/deps/installable.py -> build/lib/galaxy/tool_util/deps 2024-02-12T20:17:16,888 copying galaxy/tool_util/deps/dependencies.py -> build/lib/galaxy/tool_util/deps 2024-02-12T20:17:16,890 copying galaxy/tool_util/deps/conda_compat.py -> build/lib/galaxy/tool_util/deps 2024-02-12T20:17:16,892 copying galaxy/tool_util/deps/brew_exts.py -> build/lib/galaxy/tool_util/deps 2024-02-12T20:17:16,894 copying galaxy/tool_util/deps/brew_util.py -> build/lib/galaxy/tool_util/deps 2024-02-12T20:17:16,896 copying galaxy/tool_util/deps/views.py -> build/lib/galaxy/tool_util/deps 2024-02-12T20:17:16,898 copying galaxy/tool_util/deps/requirements.py -> build/lib/galaxy/tool_util/deps 2024-02-12T20:17:16,900 copying galaxy/tool_util/deps/commands.py -> build/lib/galaxy/tool_util/deps 2024-02-12T20:17:16,902 copying galaxy/tool_util/deps/container_volumes.py -> build/lib/galaxy/tool_util/deps 2024-02-12T20:17:16,904 copying galaxy/tool_util/deps/docker_util.py -> build/lib/galaxy/tool_util/deps 2024-02-12T20:17:16,906 copying galaxy/tool_util/deps/conda_util.py -> build/lib/galaxy/tool_util/deps 2024-02-12T20:17:16,908 copying galaxy/tool_util/deps/__init__.py -> build/lib/galaxy/tool_util/deps 2024-02-12T20:17:16,911 copying galaxy/tool_util/deps/singularity_util.py -> build/lib/galaxy/tool_util/deps 2024-02-12T20:17:16,914 creating build/lib/galaxy/tool_util/ontologies 2024-02-12T20:17:16,915 copying galaxy/tool_util/ontologies/ontology_data.py -> build/lib/galaxy/tool_util/ontologies 2024-02-12T20:17:16,917 copying galaxy/tool_util/ontologies/__init__.py -> build/lib/galaxy/tool_util/ontologies 2024-02-12T20:17:16,918 creating build/lib/galaxy/tool_util/data 2024-02-12T20:17:16,920 copying galaxy/tool_util/data/__init__.py -> build/lib/galaxy/tool_util/data 2024-02-12T20:17:16,923 copying galaxy/tool_util/data/_schema.py -> build/lib/galaxy/tool_util/data 2024-02-12T20:17:16,926 creating build/lib/galaxy/tool_util/verify 2024-02-12T20:17:16,927 copying galaxy/tool_util/verify/script.py -> build/lib/galaxy/tool_util/verify 2024-02-12T20:17:16,930 copying galaxy/tool_util/verify/interactor.py -> build/lib/galaxy/tool_util/verify 2024-02-12T20:17:16,933 copying galaxy/tool_util/verify/test_data.py -> build/lib/galaxy/tool_util/verify 2024-02-12T20:17:16,935 copying galaxy/tool_util/verify/__init__.py -> build/lib/galaxy/tool_util/verify 2024-02-12T20:17:16,938 copying galaxy/tool_util/verify/wait.py -> build/lib/galaxy/tool_util/verify 2024-02-12T20:17:16,941 creating build/lib/galaxy/tool_util/client 2024-02-12T20:17:16,942 copying galaxy/tool_util/client/staging.py -> build/lib/galaxy/tool_util/client 2024-02-12T20:17:16,944 copying galaxy/tool_util/client/__init__.py -> build/lib/galaxy/tool_util/client 2024-02-12T20:17:16,946 creating build/lib/galaxy/tool_util/locations 2024-02-12T20:17:16,948 copying galaxy/tool_util/locations/dockstore.py -> build/lib/galaxy/tool_util/locations 2024-02-12T20:17:16,950 copying galaxy/tool_util/locations/http.py -> build/lib/galaxy/tool_util/locations 2024-02-12T20:17:16,952 copying galaxy/tool_util/locations/file.py -> build/lib/galaxy/tool_util/locations 2024-02-12T20:17:16,954 copying galaxy/tool_util/locations/__init__.py -> build/lib/galaxy/tool_util/locations 2024-02-12T20:17:16,956 creating build/lib/galaxy/tool_util/linters 2024-02-12T20:17:16,958 copying galaxy/tool_util/linters/_util.py -> build/lib/galaxy/tool_util/linters 2024-02-12T20:17:16,960 copying galaxy/tool_util/linters/general.py -> build/lib/galaxy/tool_util/linters 2024-02-12T20:17:16,962 copying galaxy/tool_util/linters/command.py -> build/lib/galaxy/tool_util/linters 2024-02-12T20:17:16,964 copying galaxy/tool_util/linters/outputs.py -> build/lib/galaxy/tool_util/linters 2024-02-12T20:17:16,966 copying galaxy/tool_util/linters/tests.py -> build/lib/galaxy/tool_util/linters 2024-02-12T20:17:16,969 copying galaxy/tool_util/linters/xml_order.py -> build/lib/galaxy/tool_util/linters 2024-02-12T20:17:16,971 copying galaxy/tool_util/linters/citations.py -> build/lib/galaxy/tool_util/linters 2024-02-12T20:17:16,973 copying galaxy/tool_util/linters/cwl.py -> build/lib/galaxy/tool_util/linters 2024-02-12T20:17:16,975 copying galaxy/tool_util/linters/stdio.py -> build/lib/galaxy/tool_util/linters 2024-02-12T20:17:16,976 copying galaxy/tool_util/linters/help.py -> build/lib/galaxy/tool_util/linters 2024-02-12T20:17:16,978 copying galaxy/tool_util/linters/__init__.py -> build/lib/galaxy/tool_util/linters 2024-02-12T20:17:16,980 copying galaxy/tool_util/linters/inputs.py -> build/lib/galaxy/tool_util/linters 2024-02-12T20:17:16,983 creating build/lib/galaxy/tool_util/parser 2024-02-12T20:17:16,985 copying galaxy/tool_util/parser/factory.py -> build/lib/galaxy/tool_util/parser 2024-02-12T20:17:16,987 copying galaxy/tool_util/parser/util.py -> build/lib/galaxy/tool_util/parser 2024-02-12T20:17:16,989 copying galaxy/tool_util/parser/output_collection_def.py -> build/lib/galaxy/tool_util/parser 2024-02-12T20:17:16,991 copying galaxy/tool_util/parser/output_objects.py -> build/lib/galaxy/tool_util/parser 2024-02-12T20:17:16,994 copying galaxy/tool_util/parser/interface.py -> build/lib/galaxy/tool_util/parser 2024-02-12T20:17:16,997 copying galaxy/tool_util/parser/xml.py -> build/lib/galaxy/tool_util/parser 2024-02-12T20:17:17,000 copying galaxy/tool_util/parser/cwl.py -> build/lib/galaxy/tool_util/parser 2024-02-12T20:17:17,002 copying galaxy/tool_util/parser/stdio.py -> build/lib/galaxy/tool_util/parser 2024-02-12T20:17:17,004 copying galaxy/tool_util/parser/yaml.py -> build/lib/galaxy/tool_util/parser 2024-02-12T20:17:17,007 copying galaxy/tool_util/parser/output_actions.py -> build/lib/galaxy/tool_util/parser 2024-02-12T20:17:17,010 copying galaxy/tool_util/parser/__init__.py -> build/lib/galaxy/tool_util/parser 2024-02-12T20:17:17,012 creating build/lib/galaxy/tool_util/cwl 2024-02-12T20:17:17,013 copying galaxy/tool_util/cwl/representation.py -> build/lib/galaxy/tool_util/cwl 2024-02-12T20:17:17,016 copying galaxy/tool_util/cwl/schema.py -> build/lib/galaxy/tool_util/cwl 2024-02-12T20:17:17,018 copying galaxy/tool_util/cwl/util.py -> build/lib/galaxy/tool_util/cwl 2024-02-12T20:17:17,021 copying galaxy/tool_util/cwl/runnable.py -> build/lib/galaxy/tool_util/cwl 2024-02-12T20:17:17,023 copying galaxy/tool_util/cwl/cwltool_deps.py -> build/lib/galaxy/tool_util/cwl 2024-02-12T20:17:17,025 copying galaxy/tool_util/cwl/parser.py -> build/lib/galaxy/tool_util/cwl 2024-02-12T20:17:17,029 copying galaxy/tool_util/cwl/runtime_actions.py -> build/lib/galaxy/tool_util/cwl 2024-02-12T20:17:17,032 copying galaxy/tool_util/cwl/__init__.py -> build/lib/galaxy/tool_util/cwl 2024-02-12T20:17:17,034 creating build/lib/galaxy/tool_util/toolbox 2024-02-12T20:17:17,036 copying galaxy/tool_util/toolbox/base.py -> build/lib/galaxy/tool_util/toolbox 2024-02-12T20:17:17,039 copying galaxy/tool_util/toolbox/watcher.py -> build/lib/galaxy/tool_util/toolbox 2024-02-12T20:17:17,042 copying galaxy/tool_util/toolbox/integrated_panel.py -> build/lib/galaxy/tool_util/toolbox 2024-02-12T20:17:17,045 copying galaxy/tool_util/toolbox/panel.py -> build/lib/galaxy/tool_util/toolbox 2024-02-12T20:17:17,047 copying galaxy/tool_util/toolbox/parser.py -> build/lib/galaxy/tool_util/toolbox 2024-02-12T20:17:17,049 copying galaxy/tool_util/toolbox/__init__.py -> build/lib/galaxy/tool_util/toolbox 2024-02-12T20:17:17,052 creating build/lib/galaxy/tool_util/biotools 2024-02-12T20:17:17,053 copying galaxy/tool_util/biotools/interface.py -> build/lib/galaxy/tool_util/biotools 2024-02-12T20:17:17,055 copying galaxy/tool_util/biotools/source.py -> build/lib/galaxy/tool_util/biotools 2024-02-12T20:17:17,057 copying galaxy/tool_util/biotools/__init__.py -> build/lib/galaxy/tool_util/biotools 2024-02-12T20:17:17,059 creating build/lib/galaxy/tool_util/unittest_utils 2024-02-12T20:17:17,061 copying galaxy/tool_util/unittest_utils/interactor.py -> build/lib/galaxy/tool_util/unittest_utils 2024-02-12T20:17:17,063 copying galaxy/tool_util/unittest_utils/sample_data.py -> build/lib/galaxy/tool_util/unittest_utils 2024-02-12T20:17:17,065 copying galaxy/tool_util/unittest_utils/__init__.py -> build/lib/galaxy/tool_util/unittest_utils 2024-02-12T20:17:17,067 creating build/lib/galaxy/tool_util/deps/container_resolvers 2024-02-12T20:17:17,068 copying galaxy/tool_util/deps/container_resolvers/explicit.py -> build/lib/galaxy/tool_util/deps/container_resolvers 2024-02-12T20:17:17,071 copying galaxy/tool_util/deps/container_resolvers/test.py -> build/lib/galaxy/tool_util/deps/container_resolvers 2024-02-12T20:17:17,073 copying galaxy/tool_util/deps/container_resolvers/mulled.py -> build/lib/galaxy/tool_util/deps/container_resolvers 2024-02-12T20:17:17,076 copying galaxy/tool_util/deps/container_resolvers/__init__.py -> build/lib/galaxy/tool_util/deps/container_resolvers 2024-02-12T20:17:17,078 creating build/lib/galaxy/tool_util/deps/mulled 2024-02-12T20:17:17,080 copying galaxy/tool_util/deps/mulled/get_tests.py -> build/lib/galaxy/tool_util/deps/mulled 2024-02-12T20:17:17,082 copying galaxy/tool_util/deps/mulled/mulled_list.py -> build/lib/galaxy/tool_util/deps/mulled 2024-02-12T20:17:17,085 copying galaxy/tool_util/deps/mulled/util.py -> build/lib/galaxy/tool_util/deps/mulled 2024-02-12T20:17:17,087 copying galaxy/tool_util/deps/mulled/mulled_build_files.py -> build/lib/galaxy/tool_util/deps/mulled 2024-02-12T20:17:17,090 copying galaxy/tool_util/deps/mulled/_cli.py -> build/lib/galaxy/tool_util/deps/mulled 2024-02-12T20:17:17,092 copying galaxy/tool_util/deps/mulled/mulled_search.py -> build/lib/galaxy/tool_util/deps/mulled 2024-02-12T20:17:17,094 copying galaxy/tool_util/deps/mulled/mulled_build_channel.py -> build/lib/galaxy/tool_util/deps/mulled 2024-02-12T20:17:17,096 copying galaxy/tool_util/deps/mulled/mulled_update_singularity_containers.py -> build/lib/galaxy/tool_util/deps/mulled 2024-02-12T20:17:17,099 copying galaxy/tool_util/deps/mulled/mulled_build.py -> build/lib/galaxy/tool_util/deps/mulled 2024-02-12T20:17:17,102 copying galaxy/tool_util/deps/mulled/mulled_hash.py -> build/lib/galaxy/tool_util/deps/mulled 2024-02-12T20:17:17,104 copying galaxy/tool_util/deps/mulled/mulled_build_tool.py -> build/lib/galaxy/tool_util/deps/mulled 2024-02-12T20:17:17,106 copying galaxy/tool_util/deps/mulled/__init__.py -> build/lib/galaxy/tool_util/deps/mulled 2024-02-12T20:17:17,108 creating build/lib/galaxy/tool_util/deps/resolvers 2024-02-12T20:17:17,109 copying galaxy/tool_util/deps/resolvers/tool_shed_packages.py -> build/lib/galaxy/tool_util/deps/resolvers 2024-02-12T20:17:17,112 copying galaxy/tool_util/deps/resolvers/homebrew.py -> build/lib/galaxy/tool_util/deps/resolvers 2024-02-12T20:17:17,114 copying galaxy/tool_util/deps/resolvers/lmod.py -> build/lib/galaxy/tool_util/deps/resolvers 2024-02-12T20:17:17,116 copying galaxy/tool_util/deps/resolvers/galaxy_packages.py -> build/lib/galaxy/tool_util/deps/resolvers 2024-02-12T20:17:17,118 copying galaxy/tool_util/deps/resolvers/unlinked_tool_shed_packages.py -> build/lib/galaxy/tool_util/deps/resolvers 2024-02-12T20:17:17,121 copying galaxy/tool_util/deps/resolvers/modules.py -> build/lib/galaxy/tool_util/deps/resolvers 2024-02-12T20:17:17,124 copying galaxy/tool_util/deps/resolvers/resolver_mixins.py -> build/lib/galaxy/tool_util/deps/resolvers 2024-02-12T20:17:17,126 copying galaxy/tool_util/deps/resolvers/conda.py -> build/lib/galaxy/tool_util/deps/resolvers 2024-02-12T20:17:17,129 copying galaxy/tool_util/deps/resolvers/__init__.py -> build/lib/galaxy/tool_util/deps/resolvers 2024-02-12T20:17:17,131 copying galaxy/tool_util/deps/resolvers/brewed_tool_shed_packages.py -> build/lib/galaxy/tool_util/deps/resolvers 2024-02-12T20:17:17,134 creating build/lib/galaxy/tool_util/data/bundles 2024-02-12T20:17:17,135 copying galaxy/tool_util/data/bundles/models.py -> build/lib/galaxy/tool_util/data/bundles 2024-02-12T20:17:17,138 copying galaxy/tool_util/data/bundles/__init__.py -> build/lib/galaxy/tool_util/data/bundles 2024-02-12T20:17:17,140 creating build/lib/galaxy/tool_util/verify/asserts 2024-02-12T20:17:17,141 copying galaxy/tool_util/verify/asserts/_util.py -> build/lib/galaxy/tool_util/verify/asserts 2024-02-12T20:17:17,143 copying galaxy/tool_util/verify/asserts/hdf5.py -> build/lib/galaxy/tool_util/verify/asserts 2024-02-12T20:17:17,145 copying galaxy/tool_util/verify/asserts/tabular.py -> build/lib/galaxy/tool_util/verify/asserts 2024-02-12T20:17:17,147 copying galaxy/tool_util/verify/asserts/size.py -> build/lib/galaxy/tool_util/verify/asserts 2024-02-12T20:17:17,149 copying galaxy/tool_util/verify/asserts/json.py -> build/lib/galaxy/tool_util/verify/asserts 2024-02-12T20:17:17,151 copying galaxy/tool_util/verify/asserts/archive.py -> build/lib/galaxy/tool_util/verify/asserts 2024-02-12T20:17:17,153 copying galaxy/tool_util/verify/asserts/xml.py -> build/lib/galaxy/tool_util/verify/asserts 2024-02-12T20:17:17,155 copying galaxy/tool_util/verify/asserts/__init__.py -> build/lib/galaxy/tool_util/verify/asserts 2024-02-12T20:17:17,158 copying galaxy/tool_util/verify/asserts/text.py -> build/lib/galaxy/tool_util/verify/asserts 2024-02-12T20:17:17,161 creating build/lib/galaxy/tool_util/toolbox/views 2024-02-12T20:17:17,162 copying galaxy/tool_util/toolbox/views/definitions.py -> build/lib/galaxy/tool_util/toolbox/views 2024-02-12T20:17:17,164 copying galaxy/tool_util/toolbox/views/interface.py -> build/lib/galaxy/tool_util/toolbox/views 2024-02-12T20:17:17,166 copying galaxy/tool_util/toolbox/views/static.py -> build/lib/galaxy/tool_util/toolbox/views 2024-02-12T20:17:17,169 copying galaxy/tool_util/toolbox/views/edam.py -> build/lib/galaxy/tool_util/toolbox/views 2024-02-12T20:17:17,171 copying galaxy/tool_util/toolbox/views/sources.py -> build/lib/galaxy/tool_util/toolbox/views 2024-02-12T20:17:17,173 copying galaxy/tool_util/toolbox/views/__init__.py -> build/lib/galaxy/tool_util/toolbox/views 2024-02-12T20:17:17,175 creating build/lib/galaxy/tool_util/toolbox/filters 2024-02-12T20:17:17,177 copying galaxy/tool_util/toolbox/filters/__init__.py -> build/lib/galaxy/tool_util/toolbox/filters 2024-02-12T20:17:17,179 creating build/lib/galaxy/tool_util/toolbox/lineages 2024-02-12T20:17:17,181 copying galaxy/tool_util/toolbox/lineages/factory.py -> build/lib/galaxy/tool_util/toolbox/lineages 2024-02-12T20:17:17,183 copying galaxy/tool_util/toolbox/lineages/interface.py -> build/lib/galaxy/tool_util/toolbox/lineages 2024-02-12T20:17:17,185 copying galaxy/tool_util/toolbox/lineages/__init__.py -> build/lib/galaxy/tool_util/toolbox/lineages 2024-02-12T20:17:17,187 running egg_info 2024-02-12T20:17:17,191 writing galaxy_tool_util.egg-info/PKG-INFO 2024-02-12T20:17:17,196 writing dependency_links to galaxy_tool_util.egg-info/dependency_links.txt 2024-02-12T20:17:17,198 writing entry points to galaxy_tool_util.egg-info/entry_points.txt 2024-02-12T20:17:17,200 writing requirements to galaxy_tool_util.egg-info/requires.txt 2024-02-12T20:17:17,202 writing top-level names to galaxy_tool_util.egg-info/top_level.txt 2024-02-12T20:17:17,227 reading manifest file 'galaxy_tool_util.egg-info/SOURCES.txt' 2024-02-12T20:17:17,234 reading manifest template 'MANIFEST.in' 2024-02-12T20:17:17,238 adding license file 'LICENSE' 2024-02-12T20:17:17,247 writing manifest file 'galaxy_tool_util.egg-info/SOURCES.txt' 2024-02-12T20:17:17,251 /tmp/pip-build-env-560gwl4f/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'galaxy.tool_util.xsd' is absent from the `packages` configuration. 2024-02-12T20:17:17,251 !! 2024-02-12T20:17:17,253 ******************************************************************************** 2024-02-12T20:17:17,253 ############################ 2024-02-12T20:17:17,253 # Package would be ignored # 2024-02-12T20:17:17,254 ############################ 2024-02-12T20:17:17,254 Python recognizes 'galaxy.tool_util.xsd' as an importable package[^1], 2024-02-12T20:17:17,255 but it is absent from setuptools' `packages` configuration. 2024-02-12T20:17:17,256 This leads to an ambiguous overall configuration. If you want to distribute this 2024-02-12T20:17:17,256 package, please make sure that 'galaxy.tool_util.xsd' is explicitly added 2024-02-12T20:17:17,256 to the `packages` configuration field. 2024-02-12T20:17:17,257 Alternatively, you can also rely on setuptools' discovery methods 2024-02-12T20:17:17,258 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-02-12T20:17:17,258 instead of `find_packages(...)`/`find:`). 2024-02-12T20:17:17,259 You can read more about "package discovery" on setuptools documentation page: 2024-02-12T20:17:17,260 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-02-12T20:17:17,261 If you don't want 'galaxy.tool_util.xsd' to be distributed and are 2024-02-12T20:17:17,261 already explicitly excluding 'galaxy.tool_util.xsd' via 2024-02-12T20:17:17,262 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-02-12T20:17:17,262 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-02-12T20:17:17,263 combination with a more fine grained `package-data` configuration. 2024-02-12T20:17:17,264 You can read more about "package data files" on setuptools documentation page: 2024-02-12T20:17:17,265 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-02-12T20:17:17,267 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-02-12T20:17:17,267 even if it does not contain any `.py` files. 2024-02-12T20:17:17,268 On the other hand, currently there is no concept of package data 2024-02-12T20:17:17,268 directory, all directories are treated like packages. 2024-02-12T20:17:17,269 ******************************************************************************** 2024-02-12T20:17:17,270 !! 2024-02-12T20:17:17,271 check.warn(importable) 2024-02-12T20:17:17,275 copying galaxy/py.typed -> build/lib/galaxy 2024-02-12T20:17:17,277 creating build/lib/galaxy/tool_util/xsd 2024-02-12T20:17:17,279 copying galaxy/tool_util/xsd/LICENSE -> build/lib/galaxy/tool_util/xsd 2024-02-12T20:17:17,281 copying galaxy/tool_util/xsd/README.md -> build/lib/galaxy/tool_util/xsd 2024-02-12T20:17:17,283 copying galaxy/tool_util/xsd/galaxy.jxb -> build/lib/galaxy/tool_util/xsd 2024-02-12T20:17:17,286 copying galaxy/tool_util/xsd/galaxy.xsd -> build/lib/galaxy/tool_util/xsd 2024-02-12T20:17:17,295 copying galaxy/tool_util/ontologies/biotools_mappings.tsv -> build/lib/galaxy/tool_util/ontologies 2024-02-12T20:17:17,299 copying galaxy/tool_util/ontologies/edam_operation_mappings.tsv -> build/lib/galaxy/tool_util/ontologies 2024-02-12T20:17:17,301 copying galaxy/tool_util/ontologies/edam_topic_mappings.tsv -> build/lib/galaxy/tool_util/ontologies 2024-02-12T20:17:17,304 copying galaxy/tool_util/verify/test_config.sample.yml -> build/lib/galaxy/tool_util/verify 2024-02-12T20:17:17,306 copying galaxy/tool_util/deps/mulled/invfile.lua -> build/lib/galaxy/tool_util/deps/mulled 2024-02-12T20:17:17,309 copying galaxy/tool_util/deps/resolvers/default_conda_mapping.yml -> build/lib/galaxy/tool_util/deps/resolvers 2024-02-12T20:17:17,311 copying galaxy/tool_util/toolbox/filters/examples.py.sample -> build/lib/galaxy/tool_util/toolbox/filters 2024-02-12T20:17:17,333 installing to build/bdist.linux-armv7l/wheel 2024-02-12T20:17:17,334 running install 2024-02-12T20:17:17,359 running install_lib 2024-02-12T20:17:17,365 creating build/bdist.linux-armv7l 2024-02-12T20:17:17,366 creating build/bdist.linux-armv7l/wheel 2024-02-12T20:17:17,368 creating build/bdist.linux-armv7l/wheel/galaxy 2024-02-12T20:17:17,369 copying build/lib/galaxy/py.typed -> build/bdist.linux-armv7l/wheel/galaxy 2024-02-12T20:17:17,371 copying build/lib/galaxy/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy 2024-02-12T20:17:17,374 creating build/bdist.linux-armv7l/wheel/galaxy/tool_util 2024-02-12T20:17:17,375 creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps 2024-02-12T20:17:17,377 copying build/lib/galaxy/tool_util/deps/dockerfiles.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps 2024-02-12T20:17:17,379 copying build/lib/galaxy/tool_util/deps/container_classes.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps 2024-02-12T20:17:17,382 copying build/lib/galaxy/tool_util/deps/containers.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps 2024-02-12T20:17:17,385 copying build/lib/galaxy/tool_util/deps/installable.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps 2024-02-12T20:17:17,387 copying build/lib/galaxy/tool_util/deps/dependencies.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps 2024-02-12T20:17:17,390 creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/container_resolvers 2024-02-12T20:17:17,391 copying build/lib/galaxy/tool_util/deps/container_resolvers/explicit.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/container_resolvers 2024-02-12T20:17:17,394 copying build/lib/galaxy/tool_util/deps/container_resolvers/test.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/container_resolvers 2024-02-12T20:17:17,396 copying build/lib/galaxy/tool_util/deps/container_resolvers/mulled.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/container_resolvers 2024-02-12T20:17:17,399 copying build/lib/galaxy/tool_util/deps/container_resolvers/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/container_resolvers 2024-02-12T20:17:17,401 copying build/lib/galaxy/tool_util/deps/conda_compat.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps 2024-02-12T20:17:17,403 copying build/lib/galaxy/tool_util/deps/brew_exts.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps 2024-02-12T20:17:17,406 copying build/lib/galaxy/tool_util/deps/brew_util.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps 2024-02-12T20:17:17,408 copying build/lib/galaxy/tool_util/deps/views.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps 2024-02-12T20:17:17,411 copying build/lib/galaxy/tool_util/deps/requirements.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps 2024-02-12T20:17:17,414 copying build/lib/galaxy/tool_util/deps/commands.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps 2024-02-12T20:17:17,416 copying build/lib/galaxy/tool_util/deps/container_volumes.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps 2024-02-12T20:17:17,418 copying build/lib/galaxy/tool_util/deps/docker_util.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps 2024-02-12T20:17:17,420 copying build/lib/galaxy/tool_util/deps/conda_util.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps 2024-02-12T20:17:17,424 creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/mulled 2024-02-12T20:17:17,425 copying build/lib/galaxy/tool_util/deps/mulled/get_tests.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/mulled 2024-02-12T20:17:17,428 copying build/lib/galaxy/tool_util/deps/mulled/mulled_list.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/mulled 2024-02-12T20:17:17,430 copying build/lib/galaxy/tool_util/deps/mulled/util.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/mulled 2024-02-12T20:17:17,433 copying build/lib/galaxy/tool_util/deps/mulled/mulled_build_files.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/mulled 2024-02-12T20:17:17,435 copying build/lib/galaxy/tool_util/deps/mulled/_cli.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/mulled 2024-02-12T20:17:17,437 copying build/lib/galaxy/tool_util/deps/mulled/mulled_search.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/mulled 2024-02-12T20:17:17,440 copying build/lib/galaxy/tool_util/deps/mulled/mulled_build_channel.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/mulled 2024-02-12T20:17:17,442 copying build/lib/galaxy/tool_util/deps/mulled/mulled_update_singularity_containers.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/mulled 2024-02-12T20:17:17,444 copying build/lib/galaxy/tool_util/deps/mulled/mulled_build.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/mulled 2024-02-12T20:17:17,447 copying build/lib/galaxy/tool_util/deps/mulled/mulled_hash.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/mulled 2024-02-12T20:17:17,449 copying build/lib/galaxy/tool_util/deps/mulled/mulled_build_tool.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/mulled 2024-02-12T20:17:17,451 copying build/lib/galaxy/tool_util/deps/mulled/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/mulled 2024-02-12T20:17:17,453 copying build/lib/galaxy/tool_util/deps/mulled/invfile.lua -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/mulled 2024-02-12T20:17:17,455 creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/resolvers 2024-02-12T20:17:17,456 copying build/lib/galaxy/tool_util/deps/resolvers/tool_shed_packages.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/resolvers 2024-02-12T20:17:17,459 copying build/lib/galaxy/tool_util/deps/resolvers/default_conda_mapping.yml -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/resolvers 2024-02-12T20:17:17,461 copying build/lib/galaxy/tool_util/deps/resolvers/homebrew.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/resolvers 2024-02-12T20:17:17,463 copying build/lib/galaxy/tool_util/deps/resolvers/lmod.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/resolvers 2024-02-12T20:17:17,465 copying build/lib/galaxy/tool_util/deps/resolvers/galaxy_packages.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/resolvers 2024-02-12T20:17:17,468 copying build/lib/galaxy/tool_util/deps/resolvers/unlinked_tool_shed_packages.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/resolvers 2024-02-12T20:17:17,471 copying build/lib/galaxy/tool_util/deps/resolvers/modules.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/resolvers 2024-02-12T20:17:17,473 copying build/lib/galaxy/tool_util/deps/resolvers/resolver_mixins.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/resolvers 2024-02-12T20:17:17,475 copying build/lib/galaxy/tool_util/deps/resolvers/conda.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/resolvers 2024-02-12T20:17:17,478 copying build/lib/galaxy/tool_util/deps/resolvers/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/resolvers 2024-02-12T20:17:17,481 copying build/lib/galaxy/tool_util/deps/resolvers/brewed_tool_shed_packages.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps/resolvers 2024-02-12T20:17:17,483 copying build/lib/galaxy/tool_util/deps/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps 2024-02-12T20:17:17,486 copying build/lib/galaxy/tool_util/deps/singularity_util.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/deps 2024-02-12T20:17:17,488 creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/ontologies 2024-02-12T20:17:17,489 copying build/lib/galaxy/tool_util/ontologies/ontology_data.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/ontologies 2024-02-12T20:17:17,492 copying build/lib/galaxy/tool_util/ontologies/edam_operation_mappings.tsv -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/ontologies 2024-02-12T20:17:17,494 copying build/lib/galaxy/tool_util/ontologies/biotools_mappings.tsv -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/ontologies 2024-02-12T20:17:17,497 copying build/lib/galaxy/tool_util/ontologies/edam_topic_mappings.tsv -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/ontologies 2024-02-12T20:17:17,499 copying build/lib/galaxy/tool_util/ontologies/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/ontologies 2024-02-12T20:17:17,501 creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/data 2024-02-12T20:17:17,502 creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/data/bundles 2024-02-12T20:17:17,503 copying build/lib/galaxy/tool_util/data/bundles/models.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/data/bundles 2024-02-12T20:17:17,506 copying build/lib/galaxy/tool_util/data/bundles/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/data/bundles 2024-02-12T20:17:17,508 copying build/lib/galaxy/tool_util/data/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/data 2024-02-12T20:17:17,511 copying build/lib/galaxy/tool_util/data/_schema.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/data 2024-02-12T20:17:17,513 copying build/lib/galaxy/tool_util/version.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util 2024-02-12T20:17:17,516 creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/xsd 2024-02-12T20:17:17,517 copying build/lib/galaxy/tool_util/xsd/README.md -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/xsd 2024-02-12T20:17:17,519 copying build/lib/galaxy/tool_util/xsd/galaxy.jxb -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/xsd 2024-02-12T20:17:17,521 copying build/lib/galaxy/tool_util/xsd/LICENSE -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/xsd 2024-02-12T20:17:17,523 copying build/lib/galaxy/tool_util/xsd/galaxy.xsd -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/xsd 2024-02-12T20:17:17,533 creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify 2024-02-12T20:17:17,534 copying build/lib/galaxy/tool_util/verify/script.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify 2024-02-12T20:17:17,537 copying build/lib/galaxy/tool_util/verify/interactor.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify 2024-02-12T20:17:17,540 copying build/lib/galaxy/tool_util/verify/test_data.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify 2024-02-12T20:17:17,542 copying build/lib/galaxy/tool_util/verify/test_config.sample.yml -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify 2024-02-12T20:17:17,544 copying build/lib/galaxy/tool_util/verify/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify 2024-02-12T20:17:17,547 copying build/lib/galaxy/tool_util/verify/wait.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify 2024-02-12T20:17:17,549 creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify/asserts 2024-02-12T20:17:17,550 copying build/lib/galaxy/tool_util/verify/asserts/_util.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify/asserts 2024-02-12T20:17:17,552 copying build/lib/galaxy/tool_util/verify/asserts/hdf5.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify/asserts 2024-02-12T20:17:17,554 copying build/lib/galaxy/tool_util/verify/asserts/tabular.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify/asserts 2024-02-12T20:17:17,556 copying build/lib/galaxy/tool_util/verify/asserts/size.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify/asserts 2024-02-12T20:17:17,558 copying build/lib/galaxy/tool_util/verify/asserts/json.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify/asserts 2024-02-12T20:17:17,560 copying build/lib/galaxy/tool_util/verify/asserts/archive.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify/asserts 2024-02-12T20:17:17,562 copying build/lib/galaxy/tool_util/verify/asserts/xml.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify/asserts 2024-02-12T20:17:17,564 copying build/lib/galaxy/tool_util/verify/asserts/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify/asserts 2024-02-12T20:17:17,566 copying build/lib/galaxy/tool_util/verify/asserts/text.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/verify/asserts 2024-02-12T20:17:17,568 copying build/lib/galaxy/tool_util/lint.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util 2024-02-12T20:17:17,571 creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/client 2024-02-12T20:17:17,572 copying build/lib/galaxy/tool_util/client/staging.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/client 2024-02-12T20:17:17,574 copying build/lib/galaxy/tool_util/client/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/client 2024-02-12T20:17:17,576 copying build/lib/galaxy/tool_util/edam_util.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util 2024-02-12T20:17:17,578 creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/locations 2024-02-12T20:17:17,579 copying build/lib/galaxy/tool_util/locations/dockstore.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/locations 2024-02-12T20:17:17,581 copying build/lib/galaxy/tool_util/locations/http.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/locations 2024-02-12T20:17:17,582 copying build/lib/galaxy/tool_util/locations/file.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/locations 2024-02-12T20:17:17,584 copying build/lib/galaxy/tool_util/locations/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/locations 2024-02-12T20:17:17,586 creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/linters 2024-02-12T20:17:17,587 copying build/lib/galaxy/tool_util/linters/_util.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/linters 2024-02-12T20:17:17,588 copying build/lib/galaxy/tool_util/linters/general.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/linters 2024-02-12T20:17:17,590 copying build/lib/galaxy/tool_util/linters/command.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/linters 2024-02-12T20:17:17,592 copying build/lib/galaxy/tool_util/linters/outputs.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/linters 2024-02-12T20:17:17,594 copying build/lib/galaxy/tool_util/linters/tests.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/linters 2024-02-12T20:17:17,596 copying build/lib/galaxy/tool_util/linters/xml_order.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/linters 2024-02-12T20:17:17,598 copying build/lib/galaxy/tool_util/linters/citations.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/linters 2024-02-12T20:17:17,600 copying build/lib/galaxy/tool_util/linters/cwl.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/linters 2024-02-12T20:17:17,602 copying build/lib/galaxy/tool_util/linters/stdio.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/linters 2024-02-12T20:17:17,604 copying build/lib/galaxy/tool_util/linters/help.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/linters 2024-02-12T20:17:17,605 copying build/lib/galaxy/tool_util/linters/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/linters 2024-02-12T20:17:17,607 copying build/lib/galaxy/tool_util/linters/inputs.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/linters 2024-02-12T20:17:17,609 copying build/lib/galaxy/tool_util/output_checker.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util 2024-02-12T20:17:17,612 copying build/lib/galaxy/tool_util/fetcher.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util 2024-02-12T20:17:17,614 creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/parser 2024-02-12T20:17:17,615 copying build/lib/galaxy/tool_util/parser/factory.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/parser 2024-02-12T20:17:17,617 copying build/lib/galaxy/tool_util/parser/util.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/parser 2024-02-12T20:17:17,619 copying build/lib/galaxy/tool_util/parser/output_collection_def.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/parser 2024-02-12T20:17:17,621 copying build/lib/galaxy/tool_util/parser/output_objects.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/parser 2024-02-12T20:17:17,623 copying build/lib/galaxy/tool_util/parser/interface.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/parser 2024-02-12T20:17:17,626 copying build/lib/galaxy/tool_util/parser/xml.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/parser 2024-02-12T20:17:17,629 copying build/lib/galaxy/tool_util/parser/cwl.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/parser 2024-02-12T20:17:17,631 copying build/lib/galaxy/tool_util/parser/stdio.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/parser 2024-02-12T20:17:17,633 copying build/lib/galaxy/tool_util/parser/yaml.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/parser 2024-02-12T20:17:17,635 copying build/lib/galaxy/tool_util/parser/output_actions.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/parser 2024-02-12T20:17:17,638 copying build/lib/galaxy/tool_util/parser/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/parser 2024-02-12T20:17:17,639 copying build/lib/galaxy/tool_util/loader_directory.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util 2024-02-12T20:17:17,641 copying build/lib/galaxy/tool_util/provided_metadata.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util 2024-02-12T20:17:17,644 copying build/lib/galaxy/tool_util/loader.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util 2024-02-12T20:17:17,646 creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/cwl 2024-02-12T20:17:17,647 copying build/lib/galaxy/tool_util/cwl/representation.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/cwl 2024-02-12T20:17:17,649 copying build/lib/galaxy/tool_util/cwl/schema.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/cwl 2024-02-12T20:17:17,651 copying build/lib/galaxy/tool_util/cwl/util.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/cwl 2024-02-12T20:17:17,654 copying build/lib/galaxy/tool_util/cwl/runnable.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/cwl 2024-02-12T20:17:17,655 copying build/lib/galaxy/tool_util/cwl/cwltool_deps.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/cwl 2024-02-12T20:17:17,657 copying build/lib/galaxy/tool_util/cwl/parser.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/cwl 2024-02-12T20:17:17,660 copying build/lib/galaxy/tool_util/cwl/runtime_actions.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/cwl 2024-02-12T20:17:17,663 copying build/lib/galaxy/tool_util/cwl/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/cwl 2024-02-12T20:17:17,665 creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox 2024-02-12T20:17:17,665 copying build/lib/galaxy/tool_util/toolbox/base.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox 2024-02-12T20:17:17,669 copying build/lib/galaxy/tool_util/toolbox/watcher.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox 2024-02-12T20:17:17,671 creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox/views 2024-02-12T20:17:17,672 copying build/lib/galaxy/tool_util/toolbox/views/definitions.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox/views 2024-02-12T20:17:17,674 copying build/lib/galaxy/tool_util/toolbox/views/interface.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox/views 2024-02-12T20:17:17,676 copying build/lib/galaxy/tool_util/toolbox/views/static.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox/views 2024-02-12T20:17:17,678 copying build/lib/galaxy/tool_util/toolbox/views/edam.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox/views 2024-02-12T20:17:17,681 copying build/lib/galaxy/tool_util/toolbox/views/sources.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox/views 2024-02-12T20:17:17,682 copying build/lib/galaxy/tool_util/toolbox/views/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox/views 2024-02-12T20:17:17,684 copying build/lib/galaxy/tool_util/toolbox/integrated_panel.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox 2024-02-12T20:17:17,686 copying build/lib/galaxy/tool_util/toolbox/panel.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox 2024-02-12T20:17:17,689 creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox/filters 2024-02-12T20:17:17,690 copying build/lib/galaxy/tool_util/toolbox/filters/examples.py.sample -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox/filters 2024-02-12T20:17:17,692 copying build/lib/galaxy/tool_util/toolbox/filters/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox/filters 2024-02-12T20:17:17,694 copying build/lib/galaxy/tool_util/toolbox/parser.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox 2024-02-12T20:17:17,696 copying build/lib/galaxy/tool_util/toolbox/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox 2024-02-12T20:17:17,697 creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox/lineages 2024-02-12T20:17:17,698 copying build/lib/galaxy/tool_util/toolbox/lineages/factory.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox/lineages 2024-02-12T20:17:17,700 copying build/lib/galaxy/tool_util/toolbox/lineages/interface.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox/lineages 2024-02-12T20:17:17,702 copying build/lib/galaxy/tool_util/toolbox/lineages/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/toolbox/lineages 2024-02-12T20:17:17,704 creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/biotools 2024-02-12T20:17:17,705 copying build/lib/galaxy/tool_util/biotools/interface.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/biotools 2024-02-12T20:17:17,707 copying build/lib/galaxy/tool_util/biotools/source.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/biotools 2024-02-12T20:17:17,708 copying build/lib/galaxy/tool_util/biotools/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/biotools 2024-02-12T20:17:17,710 copying build/lib/galaxy/tool_util/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util 2024-02-12T20:17:17,712 creating build/bdist.linux-armv7l/wheel/galaxy/tool_util/unittest_utils 2024-02-12T20:17:17,713 copying build/lib/galaxy/tool_util/unittest_utils/interactor.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/unittest_utils 2024-02-12T20:17:17,715 copying build/lib/galaxy/tool_util/unittest_utils/sample_data.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/unittest_utils 2024-02-12T20:17:17,716 copying build/lib/galaxy/tool_util/unittest_utils/__init__.py -> build/bdist.linux-armv7l/wheel/galaxy/tool_util/unittest_utils 2024-02-12T20:17:17,718 running install_egg_info 2024-02-12T20:17:17,728 Copying galaxy_tool_util.egg-info to build/bdist.linux-armv7l/wheel/galaxy_tool_util-23.1.dev0-py3.11.egg-info 2024-02-12T20:17:17,739 running install_scripts 2024-02-12T20:17:17,757 creating build/bdist.linux-armv7l/wheel/galaxy_tool_util-23.1.dev0.dist-info/WHEEL 2024-02-12T20:17:17,759 creating '/tmp/pip-wheel-ire2udv3/.tmp-ipiwyaaw/galaxy_tool_util-23.1.dev0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-02-12T20:17:17,761 adding 'galaxy/__init__.py' 2024-02-12T20:17:17,763 adding 'galaxy/py.typed' 2024-02-12T20:17:17,764 adding 'galaxy/tool_util/__init__.py' 2024-02-12T20:17:17,766 adding 'galaxy/tool_util/edam_util.py' 2024-02-12T20:17:17,767 adding 'galaxy/tool_util/fetcher.py' 2024-02-12T20:17:17,769 adding 'galaxy/tool_util/lint.py' 2024-02-12T20:17:17,771 adding 'galaxy/tool_util/loader.py' 2024-02-12T20:17:17,773 adding 'galaxy/tool_util/loader_directory.py' 2024-02-12T20:17:17,775 adding 'galaxy/tool_util/output_checker.py' 2024-02-12T20:17:17,777 adding 'galaxy/tool_util/provided_metadata.py' 2024-02-12T20:17:17,778 adding 'galaxy/tool_util/version.py' 2024-02-12T20:17:17,780 adding 'galaxy/tool_util/biotools/__init__.py' 2024-02-12T20:17:17,782 adding 'galaxy/tool_util/biotools/interface.py' 2024-02-12T20:17:17,783 adding 'galaxy/tool_util/biotools/source.py' 2024-02-12T20:17:17,785 adding 'galaxy/tool_util/client/__init__.py' 2024-02-12T20:17:17,787 adding 'galaxy/tool_util/client/staging.py' 2024-02-12T20:17:17,789 adding 'galaxy/tool_util/cwl/__init__.py' 2024-02-12T20:17:17,790 adding 'galaxy/tool_util/cwl/cwltool_deps.py' 2024-02-12T20:17:17,795 adding 'galaxy/tool_util/cwl/parser.py' 2024-02-12T20:17:17,798 adding 'galaxy/tool_util/cwl/representation.py' 2024-02-12T20:17:17,799 adding 'galaxy/tool_util/cwl/runnable.py' 2024-02-12T20:17:17,801 adding 'galaxy/tool_util/cwl/runtime_actions.py' 2024-02-12T20:17:17,802 adding 'galaxy/tool_util/cwl/schema.py' 2024-02-12T20:17:17,805 adding 'galaxy/tool_util/cwl/util.py' 2024-02-12T20:17:17,813 adding 'galaxy/tool_util/data/__init__.py' 2024-02-12T20:17:17,815 adding 'galaxy/tool_util/data/_schema.py' 2024-02-12T20:17:17,816 adding 'galaxy/tool_util/data/bundles/__init__.py' 2024-02-12T20:17:17,818 adding 'galaxy/tool_util/data/bundles/models.py' 2024-02-12T20:17:17,822 adding 'galaxy/tool_util/deps/__init__.py' 2024-02-12T20:17:17,825 adding 'galaxy/tool_util/deps/brew_exts.py' 2024-02-12T20:17:17,826 adding 'galaxy/tool_util/deps/brew_util.py' 2024-02-12T20:17:17,828 adding 'galaxy/tool_util/deps/commands.py' 2024-02-12T20:17:17,829 adding 'galaxy/tool_util/deps/conda_compat.py' 2024-02-12T20:17:17,832 adding 'galaxy/tool_util/deps/conda_util.py' 2024-02-12T20:17:17,835 adding 'galaxy/tool_util/deps/container_classes.py' 2024-02-12T20:17:17,837 adding 'galaxy/tool_util/deps/container_volumes.py' 2024-02-12T20:17:17,839 adding 'galaxy/tool_util/deps/containers.py' 2024-02-12T20:17:17,840 adding 'galaxy/tool_util/deps/dependencies.py' 2024-02-12T20:17:17,842 adding 'galaxy/tool_util/deps/docker_util.py' 2024-02-12T20:17:17,844 adding 'galaxy/tool_util/deps/dockerfiles.py' 2024-02-12T20:17:17,845 adding 'galaxy/tool_util/deps/installable.py' 2024-02-12T20:17:17,847 adding 'galaxy/tool_util/deps/requirements.py' 2024-02-12T20:17:17,849 adding 'galaxy/tool_util/deps/singularity_util.py' 2024-02-12T20:17:17,851 adding 'galaxy/tool_util/deps/views.py' 2024-02-12T20:17:17,853 adding 'galaxy/tool_util/deps/container_resolvers/__init__.py' 2024-02-12T20:17:17,856 adding 'galaxy/tool_util/deps/container_resolvers/explicit.py' 2024-02-12T20:17:17,859 adding 'galaxy/tool_util/deps/container_resolvers/mulled.py' 2024-02-12T20:17:17,861 adding 'galaxy/tool_util/deps/container_resolvers/test.py' 2024-02-12T20:17:17,862 adding 'galaxy/tool_util/deps/mulled/__init__.py' 2024-02-12T20:17:17,864 adding 'galaxy/tool_util/deps/mulled/_cli.py' 2024-02-12T20:17:17,866 adding 'galaxy/tool_util/deps/mulled/get_tests.py' 2024-02-12T20:17:17,868 adding 'galaxy/tool_util/deps/mulled/invfile.lua' 2024-02-12T20:17:17,871 adding 'galaxy/tool_util/deps/mulled/mulled_build.py' 2024-02-12T20:17:17,872 adding 'galaxy/tool_util/deps/mulled/mulled_build_channel.py' 2024-02-12T20:17:17,874 adding 'galaxy/tool_util/deps/mulled/mulled_build_files.py' 2024-02-12T20:17:17,875 adding 'galaxy/tool_util/deps/mulled/mulled_build_tool.py' 2024-02-12T20:17:17,876 adding 'galaxy/tool_util/deps/mulled/mulled_hash.py' 2024-02-12T20:17:17,877 adding 'galaxy/tool_util/deps/mulled/mulled_list.py' 2024-02-12T20:17:17,880 adding 'galaxy/tool_util/deps/mulled/mulled_search.py' 2024-02-12T20:17:17,882 adding 'galaxy/tool_util/deps/mulled/mulled_update_singularity_containers.py' 2024-02-12T20:17:17,884 adding 'galaxy/tool_util/deps/mulled/util.py' 2024-02-12T20:17:17,887 adding 'galaxy/tool_util/deps/resolvers/__init__.py' 2024-02-12T20:17:17,888 adding 'galaxy/tool_util/deps/resolvers/brewed_tool_shed_packages.py' 2024-02-12T20:17:17,891 adding 'galaxy/tool_util/deps/resolvers/conda.py' 2024-02-12T20:17:17,892 adding 'galaxy/tool_util/deps/resolvers/default_conda_mapping.yml' 2024-02-12T20:17:17,894 adding 'galaxy/tool_util/deps/resolvers/galaxy_packages.py' 2024-02-12T20:17:17,895 adding 'galaxy/tool_util/deps/resolvers/homebrew.py' 2024-02-12T20:17:17,897 adding 'galaxy/tool_util/deps/resolvers/lmod.py' 2024-02-12T20:17:17,898 adding 'galaxy/tool_util/deps/resolvers/modules.py' 2024-02-12T20:17:17,900 adding 'galaxy/tool_util/deps/resolvers/resolver_mixins.py' 2024-02-12T20:17:17,901 adding 'galaxy/tool_util/deps/resolvers/tool_shed_packages.py' 2024-02-12T20:17:17,903 adding 'galaxy/tool_util/deps/resolvers/unlinked_tool_shed_packages.py' 2024-02-12T20:17:17,904 adding 'galaxy/tool_util/linters/__init__.py' 2024-02-12T20:17:17,905 adding 'galaxy/tool_util/linters/_util.py' 2024-02-12T20:17:17,906 adding 'galaxy/tool_util/linters/citations.py' 2024-02-12T20:17:17,908 adding 'galaxy/tool_util/linters/command.py' 2024-02-12T20:17:17,909 adding 'galaxy/tool_util/linters/cwl.py' 2024-02-12T20:17:17,910 adding 'galaxy/tool_util/linters/general.py' 2024-02-12T20:17:17,911 adding 'galaxy/tool_util/linters/help.py' 2024-02-12T20:17:17,914 adding 'galaxy/tool_util/linters/inputs.py' 2024-02-12T20:17:17,915 adding 'galaxy/tool_util/linters/outputs.py' 2024-02-12T20:17:17,916 adding 'galaxy/tool_util/linters/stdio.py' 2024-02-12T20:17:17,918 adding 'galaxy/tool_util/linters/tests.py' 2024-02-12T20:17:17,920 adding 'galaxy/tool_util/linters/xml_order.py' 2024-02-12T20:17:17,921 adding 'galaxy/tool_util/locations/__init__.py' 2024-02-12T20:17:17,923 adding 'galaxy/tool_util/locations/dockstore.py' 2024-02-12T20:17:17,924 adding 'galaxy/tool_util/locations/file.py' 2024-02-12T20:17:17,925 adding 'galaxy/tool_util/locations/http.py' 2024-02-12T20:17:17,926 adding 'galaxy/tool_util/ontologies/__init__.py' 2024-02-12T20:17:17,932 adding 'galaxy/tool_util/ontologies/biotools_mappings.tsv' 2024-02-12T20:17:17,933 adding 'galaxy/tool_util/ontologies/edam_operation_mappings.tsv' 2024-02-12T20:17:17,934 adding 'galaxy/tool_util/ontologies/edam_topic_mappings.tsv' 2024-02-12T20:17:17,936 adding 'galaxy/tool_util/ontologies/ontology_data.py' 2024-02-12T20:17:17,938 adding 'galaxy/tool_util/parser/__init__.py' 2024-02-12T20:17:17,939 adding 'galaxy/tool_util/parser/cwl.py' 2024-02-12T20:17:17,940 adding 'galaxy/tool_util/parser/factory.py' 2024-02-12T20:17:17,943 adding 'galaxy/tool_util/parser/interface.py' 2024-02-12T20:17:17,946 adding 'galaxy/tool_util/parser/output_actions.py' 2024-02-12T20:17:17,947 adding 'galaxy/tool_util/parser/output_collection_def.py' 2024-02-12T20:17:17,949 adding 'galaxy/tool_util/parser/output_objects.py' 2024-02-12T20:17:17,951 adding 'galaxy/tool_util/parser/stdio.py' 2024-02-12T20:17:17,952 adding 'galaxy/tool_util/parser/util.py' 2024-02-12T20:17:17,959 adding 'galaxy/tool_util/parser/xml.py' 2024-02-12T20:17:17,961 adding 'galaxy/tool_util/parser/yaml.py' 2024-02-12T20:17:17,963 adding 'galaxy/tool_util/toolbox/__init__.py' 2024-02-12T20:17:17,971 adding 'galaxy/tool_util/toolbox/base.py' 2024-02-12T20:17:17,973 adding 'galaxy/tool_util/toolbox/integrated_panel.py' 2024-02-12T20:17:17,974 adding 'galaxy/tool_util/toolbox/panel.py' 2024-02-12T20:17:17,976 adding 'galaxy/tool_util/toolbox/parser.py' 2024-02-12T20:17:17,978 adding 'galaxy/tool_util/toolbox/watcher.py' 2024-02-12T20:17:17,980 adding 'galaxy/tool_util/toolbox/filters/__init__.py' 2024-02-12T20:17:17,982 adding 'galaxy/tool_util/toolbox/filters/examples.py.sample' 2024-02-12T20:17:17,983 adding 'galaxy/tool_util/toolbox/lineages/__init__.py' 2024-02-12T20:17:17,985 adding 'galaxy/tool_util/toolbox/lineages/factory.py' 2024-02-12T20:17:17,986 adding 'galaxy/tool_util/toolbox/lineages/interface.py' 2024-02-12T20:17:17,988 adding 'galaxy/tool_util/toolbox/views/__init__.py' 2024-02-12T20:17:17,989 adding 'galaxy/tool_util/toolbox/views/definitions.py' 2024-02-12T20:17:17,991 adding 'galaxy/tool_util/toolbox/views/edam.py' 2024-02-12T20:17:17,992 adding 'galaxy/tool_util/toolbox/views/interface.py' 2024-02-12T20:17:17,993 adding 'galaxy/tool_util/toolbox/views/sources.py' 2024-02-12T20:17:17,995 adding 'galaxy/tool_util/toolbox/views/static.py' 2024-02-12T20:17:17,997 adding 'galaxy/tool_util/unittest_utils/__init__.py' 2024-02-12T20:17:17,998 adding 'galaxy/tool_util/unittest_utils/interactor.py' 2024-02-12T20:17:17,999 adding 'galaxy/tool_util/unittest_utils/sample_data.py' 2024-02-12T20:17:18,002 adding 'galaxy/tool_util/verify/__init__.py' 2024-02-12T20:17:18,011 adding 'galaxy/tool_util/verify/interactor.py' 2024-02-12T20:17:18,015 adding 'galaxy/tool_util/verify/script.py' 2024-02-12T20:17:18,016 adding 'galaxy/tool_util/verify/test_config.sample.yml' 2024-02-12T20:17:18,017 adding 'galaxy/tool_util/verify/test_data.py' 2024-02-12T20:17:18,019 adding 'galaxy/tool_util/verify/wait.py' 2024-02-12T20:17:18,021 adding 'galaxy/tool_util/verify/asserts/__init__.py' 2024-02-12T20:17:18,022 adding 'galaxy/tool_util/verify/asserts/_util.py' 2024-02-12T20:17:18,024 adding 'galaxy/tool_util/verify/asserts/archive.py' 2024-02-12T20:17:18,025 adding 'galaxy/tool_util/verify/asserts/hdf5.py' 2024-02-12T20:17:18,026 adding 'galaxy/tool_util/verify/asserts/json.py' 2024-02-12T20:17:18,027 adding 'galaxy/tool_util/verify/asserts/size.py' 2024-02-12T20:17:18,028 adding 'galaxy/tool_util/verify/asserts/tabular.py' 2024-02-12T20:17:18,030 adding 'galaxy/tool_util/verify/asserts/text.py' 2024-02-12T20:17:18,031 adding 'galaxy/tool_util/verify/asserts/xml.py' 2024-02-12T20:17:18,033 adding 'galaxy/tool_util/xsd/LICENSE' 2024-02-12T20:17:18,035 adding 'galaxy/tool_util/xsd/README.md' 2024-02-12T20:17:18,036 adding 'galaxy/tool_util/xsd/galaxy.jxb' 2024-02-12T20:17:18,071 adding 'galaxy/tool_util/xsd/galaxy.xsd' 2024-02-12T20:17:18,076 adding 'galaxy_tool_util-23.1.dev0.dist-info/LICENSE' 2024-02-12T20:17:18,078 adding 'galaxy_tool_util-23.1.dev0.dist-info/METADATA' 2024-02-12T20:17:18,079 adding 'galaxy_tool_util-23.1.dev0.dist-info/WHEEL' 2024-02-12T20:17:18,080 adding 'galaxy_tool_util-23.1.dev0.dist-info/entry_points.txt' 2024-02-12T20:17:18,080 adding 'galaxy_tool_util-23.1.dev0.dist-info/top_level.txt' 2024-02-12T20:17:18,083 adding 'galaxy_tool_util-23.1.dev0.dist-info/RECORD' 2024-02-12T20:17:18,091 removing build/bdist.linux-armv7l/wheel 2024-02-12T20:17:18,220 Building wheel for galaxy-tool-util (pyproject.toml): finished with status 'done' 2024-02-12T20:17:18,233 Created wheel for galaxy-tool-util: filename=galaxy_tool_util-23.1.dev0-py3-none-any.whl size=403288 sha256=2748d1c5a2fb05e4ba6137d14bf7b064e15f3a95303d9d0151cae644ad93dca4 2024-02-12T20:17:18,235 Stored in directory: /tmp/pip-ephem-wheel-cache-ll2r2y1h/wheels/da/f9/5e/0ba62bf4c425c0b510c9bd39aff769c947e9b31aa8d0250bd6 2024-02-12T20:17:18,251 Successfully built galaxy-tool-util 2024-02-12T20:17:18,265 Removed build tracker: '/tmp/pip-build-tracker-eubeaz2a'