2024-02-13T03:46:29,878 Created temporary directory: /tmp/pip-build-tracker-d0vx1une 2024-02-13T03:46:29,879 Initialized build tracking at /tmp/pip-build-tracker-d0vx1une 2024-02-13T03:46:29,880 Created build tracker: /tmp/pip-build-tracker-d0vx1une 2024-02-13T03:46:29,880 Entered build tracker: /tmp/pip-build-tracker-d0vx1une 2024-02-13T03:46:29,881 Created temporary directory: /tmp/pip-wheel-se78hejc 2024-02-13T03:46:29,884 Created temporary directory: /tmp/pip-ephem-wheel-cache-6frg2iez 2024-02-13T03:46:29,909 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-02-13T03:46:29,913 2 location(s) to search for versions of hpo-toolkit: 2024-02-13T03:46:29,913 * https://pypi.org/simple/hpo-toolkit/ 2024-02-13T03:46:29,913 * https://www.piwheels.org/simple/hpo-toolkit/ 2024-02-13T03:46:29,914 Fetching project page and analyzing links: https://pypi.org/simple/hpo-toolkit/ 2024-02-13T03:46:29,914 Getting page https://pypi.org/simple/hpo-toolkit/ 2024-02-13T03:46:29,916 Found index url https://pypi.org/simple/ 2024-02-13T03:46:30,054 Fetched page https://pypi.org/simple/hpo-toolkit/ as application/vnd.pypi.simple.v1+json 2024-02-13T03:46:30,060 Found link https://files.pythonhosted.org/packages/ca/a8/711d9dcbd5ce3032c2b87c17d4cea73a92d72373279a6797104f385fe772/hpo-toolkit-0.0.1.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8), version: 0.0.1 2024-02-13T03:46:30,061 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/db/4b/fefdb80f7fc92b4582605f934105959e44e73fb42593df986e489b48c639/hpo_toolkit-0.0.1-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T03:46:30,062 Found link https://files.pythonhosted.org/packages/97/03/7730068713319df3faff2ee4bfe9f79b27291dcc2aa52bf7e6cbc08037b4/hpo-toolkit-0.1.0.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8), version: 0.1.0 2024-02-13T03:46:30,062 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/bc/0f/b3d21a75ade171e203465bcd9bacd5ca53c26c9e9a822ba73ff46a93c30c/hpo_toolkit-0.1.0-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T03:46:30,063 Found link https://files.pythonhosted.org/packages/e2/e6/36ad8215b6c614fef18509b652c2dd66fd3ce6797d7b7d75a35609935505/hpo-toolkit-0.1.1.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8), version: 0.1.1 2024-02-13T03:46:30,064 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/fe/75/20ad6e1322bd96a826c2125746ef2e8d89a74a62c3cd0ba10d96fd3cd358/hpo_toolkit-0.1.1-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T03:46:30,065 Found link https://files.pythonhosted.org/packages/5f/45/51e64d48d20318801db3281d747451f60a876ec457ce063923c7cad89c6a/hpo-toolkit-0.1.2.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.6), version: 0.1.2 2024-02-13T03:46:30,066 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/58/3f/1209266429cf4dd4c4ee136ba4ca3bb4aa9a6ab9429cab80d418d46b220c/hpo_toolkit-0.1.2-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.6) 2024-02-13T03:46:30,067 Found link https://files.pythonhosted.org/packages/fa/5f/eb46e3989329c498db93b7160015714202b11ef1818132264622eef9c552/hpo-toolkit-0.1.3.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.6), version: 0.1.3 2024-02-13T03:46:30,068 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/6c/e7/915925e63777254fbde62a3cf37a0f2110368cae8aac1f4274845afe3671/hpo_toolkit-0.1.3-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.6) 2024-02-13T03:46:30,068 Found link https://files.pythonhosted.org/packages/2e/2e/0768b54f6992c5032825950a595ee00db58999c493c4e6763b61eeaa68c5/hpo-toolkit-0.1.3.post0.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.6), version: 0.1.3.post0 2024-02-13T03:46:30,069 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/1d/8a/0ad17020c77918897b9eed16d237bedd1ecc7c4a020c52b28cd46a3c21bb/hpo_toolkit-0.1.3.post0-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.6) 2024-02-13T03:46:30,070 Found link https://files.pythonhosted.org/packages/7b/1a/8fa1f88a56555956f4999c1fa51be406293df8d965deb1d600ddf885b298/hpo-toolkit-0.1.4.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.6), version: 0.1.4 2024-02-13T03:46:30,071 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/ca/19/7a1fc7b879a91d9f6c7bd92a93a4de737aa3436176954b6fbf6323e1866b/hpo_toolkit-0.1.4-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.6) 2024-02-13T03:46:30,072 Found link https://files.pythonhosted.org/packages/03/82/910c6f0cd8ce4491c883f4097599e66ce693ad1ed56ab09cc7885388cc78/hpo-toolkit-0.1.5.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8), version: 0.1.5 2024-02-13T03:46:30,072 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/aa/8a/753d7b3cb675dad2fd8a0d75a135b0f548c006d01919386df501b67bc8ad/hpo_toolkit-0.1.5-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T03:46:30,073 Found link https://files.pythonhosted.org/packages/71/cf/074d90cdcf4f7b778a2d8aa06b80b2b40a4e582a54cb2643a5780f9586f6/hpo-toolkit-0.2.0.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8), version: 0.2.0 2024-02-13T03:46:30,074 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/eb/d0/34e5f1b6dce3bd47efa08fddd21e029e1a250e622d54da017c622d4754d7/hpo_toolkit-0.2.0-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T03:46:30,074 Found link https://files.pythonhosted.org/packages/0d/da/6a30a4dac46348e6c897cbe157bb6c484859ee5a094a6dc4660079e16e52/hpo-toolkit-0.3.0.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8), version: 0.3.0 2024-02-13T03:46:30,075 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/f9/69/21cad5b039ce5f982af72b519c730edc1883541f1ce7b83aa4d944551726/hpo_toolkit-0.3.0-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T03:46:30,076 Found link https://files.pythonhosted.org/packages/4e/1e/7e89ef9ee960aaf9bd47076a3d609f2db6ced321b40f386c39964a2a3e66/hpo-toolkit-0.3.1.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8), version: 0.3.1 2024-02-13T03:46:30,076 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/74/13/b1184c5741050c469a59b1bb2cc6226a477403c796f9cea285e033205a43/hpo_toolkit-0.3.1-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T03:46:30,077 Found link https://files.pythonhosted.org/packages/13/87/fead1e6a0c2a0c627cd3a5b352e9a5127a1e0642c3b5267bba23cbeb1eea/hpo-toolkit-0.3.1.post1.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8), version: 0.3.1.post1 2024-02-13T03:46:30,078 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/f5/cb/8d8f4cba86bd715cda9e04fde1c42dc07ada54d0d5fc0d894a65bccd49fa/hpo_toolkit-0.3.1.post1-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T03:46:30,079 Found link https://files.pythonhosted.org/packages/28/45/ed2418d7620e37c2e30b6d938e303b3c1351817a8f4accaa916cb8b58681/hpo-toolkit-0.4.0.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8), version: 0.4.0 2024-02-13T03:46:30,080 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/23/c2/8ff4702e80a1a4520b20eb095a2bf830c05cd71d22e04619280a7e344623/hpo_toolkit-0.4.0-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T03:46:30,081 Found link https://files.pythonhosted.org/packages/9e/94/0d26447d77727c706189102af3280fc9a2f1e5ea935af300975b34259026/hpo-toolkit-0.4.1.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8), version: 0.4.1 2024-02-13T03:46:30,081 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/2c/04/25eedae16433a42f54989ac2447af2d3a26fb3e498ef33bc2606d00ee73a/hpo_toolkit-0.4.1-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T03:46:30,082 Found link https://files.pythonhosted.org/packages/92/30/660ca0ffb6d8b0a9a3ca695dc4c2283bb2fd01b644a469aa435fa23174d1/hpo-toolkit-0.4.2.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8), version: 0.4.2 2024-02-13T03:46:30,083 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/09/5a/e3036f822206db3ae13d3be9c52e3daf331f32efbc83a8de1228ab53f50a/hpo_toolkit-0.4.2-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T03:46:30,083 Fetching project page and analyzing links: https://www.piwheels.org/simple/hpo-toolkit/ 2024-02-13T03:46:30,084 Getting page https://www.piwheels.org/simple/hpo-toolkit/ 2024-02-13T03:46:30,085 Found index url https://www.piwheels.org/simple/ 2024-02-13T03:46:30,245 Fetched page https://www.piwheels.org/simple/hpo-toolkit/ as text/html 2024-02-13T03:46:30,250 Skipping link: No binaries permitted for hpo-toolkit: https://www.piwheels.org/simple/hpo-toolkit/hpo_toolkit-0.4.1-py3-none-any.whl#sha256=856943ed068325a0292c603f5fb46e7ca96d74ff183b4112346e84faf1bd20da (from https://www.piwheels.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T03:46:30,251 Skipping link: No binaries permitted for hpo-toolkit: https://www.piwheels.org/simple/hpo-toolkit/hpo_toolkit-0.4.0-py3-none-any.whl#sha256=b09d0f948422b3c9b427bf596c4eb3ce2adcc3f377e0a3df2726f262a36fbad0 (from https://www.piwheels.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T03:46:30,252 Skipping link: No binaries permitted for hpo-toolkit: https://www.piwheels.org/simple/hpo-toolkit/hpo_toolkit-0.3.1.post1-py3-none-any.whl#sha256=742d084c90ed4dc794f18124569bc127a2f8d89d877dce9ea39ae808df7a649b (from https://www.piwheels.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T03:46:30,252 Skipping link: No binaries permitted for hpo-toolkit: https://www.piwheels.org/simple/hpo-toolkit/hpo_toolkit-0.3.1-py3-none-any.whl#sha256=6a8d30254bde87514de60736ddfe07dbf2eba8bb236c59ed84dc356854115d9f (from https://www.piwheels.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T03:46:30,253 Skipping link: No binaries permitted for hpo-toolkit: https://www.piwheels.org/simple/hpo-toolkit/hpo_toolkit-0.3.0-py3-none-any.whl#sha256=94c380a687b421287a3b9501925763501a059abe8e34cfe0677cb6dc9f08d904 (from https://www.piwheels.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T03:46:30,253 Skipping link: No binaries permitted for hpo-toolkit: https://www.piwheels.org/simple/hpo-toolkit/hpo_toolkit-0.2.0-py3-none-any.whl#sha256=c065aea0a8649fab99c42495f74a956cdfd23e8ae8c1d403cbda42afbe112c4b (from https://www.piwheels.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T03:46:30,254 Skipping link: No binaries permitted for hpo-toolkit: https://www.piwheels.org/simple/hpo-toolkit/hpo_toolkit-0.1.5-py3-none-any.whl#sha256=4cb774e88cfdf25a2f255192ed801ae0ad6a75b9a047d88af63699be9ba6751d (from https://www.piwheels.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T03:46:30,254 Skipping link: No binaries permitted for hpo-toolkit: https://www.piwheels.org/simple/hpo-toolkit/hpo_toolkit-0.1.4-py3-none-any.whl#sha256=025c22c02ffea2ead1745b016d38971c592e4830c5a9c00abf7994f92cbe5640 (from https://www.piwheels.org/simple/hpo-toolkit/) (requires-python:>=3.6) 2024-02-13T03:46:30,255 Skipping link: No binaries permitted for hpo-toolkit: https://www.piwheels.org/simple/hpo-toolkit/hpo_toolkit-0.1.3.post0-py3-none-any.whl#sha256=18ee8da29a052f43b699b468fd06b408f120009588fffbe58553bc4ba143c6a2 (from https://www.piwheels.org/simple/hpo-toolkit/) (requires-python:>=3.6) 2024-02-13T03:46:30,255 Skipping link: No binaries permitted for hpo-toolkit: https://www.piwheels.org/simple/hpo-toolkit/hpo_toolkit-0.1.3-py3-none-any.whl#sha256=f00d3839e2e2771a1a367a28f4c4cd683421b6945f35798e4f16347b307fb728 (from https://www.piwheels.org/simple/hpo-toolkit/) (requires-python:>=3.6) 2024-02-13T03:46:30,256 Skipping link: No binaries permitted for hpo-toolkit: https://www.piwheels.org/simple/hpo-toolkit/hpo_toolkit-0.1.2-py3-none-any.whl#sha256=7098761793b2f1fde0dbf8f218e3a42721d05b1443d2405a7b7f7717768f7bdc (from https://www.piwheels.org/simple/hpo-toolkit/) (requires-python:>=3.6) 2024-02-13T03:46:30,256 Skipping link: No binaries permitted for hpo-toolkit: https://www.piwheels.org/simple/hpo-toolkit/hpo_toolkit-0.1.1-py3-none-any.whl#sha256=fc1c6e36d51bbdf8cbcc2cee69652c17601fde5f38bffd6a2de33043de5833c6 (from https://www.piwheels.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T03:46:30,257 Skipping link: No binaries permitted for hpo-toolkit: https://www.piwheels.org/simple/hpo-toolkit/hpo_toolkit-0.1.0-py3-none-any.whl#sha256=281377094b0839266141544d8b624f66426ef3bfd3ab32665265c4daef22c016 (from https://www.piwheels.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T03:46:30,257 Skipping link: No binaries permitted for hpo-toolkit: https://www.piwheels.org/simple/hpo-toolkit/hpo_toolkit-0.0.1-py3-none-any.whl#sha256=1f7dded9eaafd70bfca08fc03a34551b611fe805d4b8aed4594d587bab9b9ee3 (from https://www.piwheels.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T03:46:30,258 Skipping link: not a file: https://www.piwheels.org/simple/hpo-toolkit/ 2024-02-13T03:46:30,258 Skipping link: not a file: https://pypi.org/simple/hpo-toolkit/ 2024-02-13T03:46:30,278 Given no hashes to check 1 links for project 'hpo-toolkit': discarding no candidates 2024-02-13T03:46:30,296 Collecting hpo-toolkit==0.4.2 2024-02-13T03:46:30,298 Created temporary directory: /tmp/pip-unpack-wrejvkjm 2024-02-13T03:46:30,515 Downloading hpo-toolkit-0.4.2.tar.gz (96 kB) 2024-02-13T03:46:30,732 Added hpo-toolkit==0.4.2 from https://files.pythonhosted.org/packages/92/30/660ca0ffb6d8b0a9a3ca695dc4c2283bb2fd01b644a469aa435fa23174d1/hpo-toolkit-0.4.2.tar.gz to build tracker '/tmp/pip-build-tracker-d0vx1une' 2024-02-13T03:46:30,737 Created temporary directory: /tmp/pip-build-env-0xp5elcg 2024-02-13T03:46:30,741 Installing build dependencies: started 2024-02-13T03:46:30,742 Running command pip subprocess to install build dependencies 2024-02-13T03:46:31,909 Using pip 23.3.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-02-13T03:46:32,424 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-02-13T03:46:33,821 Collecting setuptools>=65.6.3 2024-02-13T03:46:33,837 Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.1.0-py3-none-any.whl (819 kB) 2024-02-13T03:46:36,423 Installing collected packages: setuptools 2024-02-13T03:46:38,876 Successfully installed setuptools-69.1.0 2024-02-13T03:46:39,204 [notice] A new release of pip is available: 23.3.1 -> 24.0 2024-02-13T03:46:39,205 [notice] To update, run: python3 -m pip install --upgrade pip 2024-02-13T03:46:39,469 Installing build dependencies: finished with status 'done' 2024-02-13T03:46:39,473 Getting requirements to build wheel: started 2024-02-13T03:46:39,474 Running command Getting requirements to build wheel 2024-02-13T03:46:39,975 No `packages` or `py_modules` configuration, performing automatic discovery. 2024-02-13T03:46:39,976 `src-layout` detected -- analysing ./src 2024-02-13T03:46:39,986 discovered packages -- ['hpotk', 'hpotk.annotations', 'hpotk.constants', 'hpotk.ontology', 'hpotk.graph', 'hpotk.util', 'hpotk.model', 'hpotk.algorithm', 'hpotk.validate', 'hpotk.annotations.load', 'hpotk.annotations.load.hpoa', 'hpotk.constants.hpo', 'hpotk.ontology.load', 'hpotk.ontology.load.obographs', 'hpotk.graph.csr', 'hpotk.util.sort', 'hpotk.algorithm.similarity'] 2024-02-13T03:46:39,987 discovered py_modules -- [] 2024-02-13T03:46:40,231 running egg_info 2024-02-13T03:46:40,234 writing src/hpo_toolkit.egg-info/PKG-INFO 2024-02-13T03:46:40,243 writing dependency_links to src/hpo_toolkit.egg-info/dependency_links.txt 2024-02-13T03:46:40,246 writing requirements to src/hpo_toolkit.egg-info/requires.txt 2024-02-13T03:46:40,247 writing top-level names to src/hpo_toolkit.egg-info/top_level.txt 2024-02-13T03:46:40,277 reading manifest file 'src/hpo_toolkit.egg-info/SOURCES.txt' 2024-02-13T03:46:40,280 adding license file 'LICENSE' 2024-02-13T03:46:40,285 writing manifest file 'src/hpo_toolkit.egg-info/SOURCES.txt' 2024-02-13T03:46:40,396 Getting requirements to build wheel: finished with status 'done' 2024-02-13T03:46:40,404 Installing backend dependencies: started 2024-02-13T03:46:40,405 Running command pip subprocess to install backend dependencies 2024-02-13T03:46:41,540 Using pip 23.3.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-02-13T03:46:42,059 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-02-13T03:46:42,536 Collecting wheel 2024-02-13T03:46:42,550 Using cached https://www.piwheels.org/simple/wheel/wheel-0.42.0-py3-none-any.whl (65 kB) 2024-02-13T03:46:44,785 Installing collected packages: wheel 2024-02-13T03:46:45,237 Creating /tmp/pip-build-env-0xp5elcg/normal/local/bin 2024-02-13T03:46:45,239 changing mode of /tmp/pip-build-env-0xp5elcg/normal/local/bin/wheel to 755 2024-02-13T03:46:45,251 Successfully installed wheel-0.42.0 2024-02-13T03:46:45,577 [notice] A new release of pip is available: 23.3.1 -> 24.0 2024-02-13T03:46:45,578 [notice] To update, run: python3 -m pip install --upgrade pip 2024-02-13T03:46:45,805 Installing backend dependencies: finished with status 'done' 2024-02-13T03:46:45,807 Created temporary directory: /tmp/pip-modern-metadata-70dtekn5 2024-02-13T03:46:45,810 Preparing metadata (pyproject.toml): started 2024-02-13T03:46:45,811 Running command Preparing metadata (pyproject.toml) 2024-02-13T03:46:46,300 No `packages` or `py_modules` configuration, performing automatic discovery. 2024-02-13T03:46:46,300 `src-layout` detected -- analysing ./src 2024-02-13T03:46:46,307 discovered packages -- ['hpotk', 'hpotk.annotations', 'hpotk.constants', 'hpotk.ontology', 'hpotk.graph', 'hpotk.util', 'hpotk.model', 'hpotk.algorithm', 'hpotk.validate', 'hpotk.annotations.load', 'hpotk.annotations.load.hpoa', 'hpotk.constants.hpo', 'hpotk.ontology.load', 'hpotk.ontology.load.obographs', 'hpotk.graph.csr', 'hpotk.util.sort', 'hpotk.algorithm.similarity'] 2024-02-13T03:46:46,307 discovered py_modules -- [] 2024-02-13T03:46:46,608 running dist_info 2024-02-13T03:46:46,612 creating /tmp/pip-modern-metadata-70dtekn5/hpo_toolkit.egg-info 2024-02-13T03:46:46,616 writing /tmp/pip-modern-metadata-70dtekn5/hpo_toolkit.egg-info/PKG-INFO 2024-02-13T03:46:46,624 writing dependency_links to /tmp/pip-modern-metadata-70dtekn5/hpo_toolkit.egg-info/dependency_links.txt 2024-02-13T03:46:46,627 writing requirements to /tmp/pip-modern-metadata-70dtekn5/hpo_toolkit.egg-info/requires.txt 2024-02-13T03:46:46,628 writing top-level names to /tmp/pip-modern-metadata-70dtekn5/hpo_toolkit.egg-info/top_level.txt 2024-02-13T03:46:46,630 writing manifest file '/tmp/pip-modern-metadata-70dtekn5/hpo_toolkit.egg-info/SOURCES.txt' 2024-02-13T03:46:46,665 reading manifest file '/tmp/pip-modern-metadata-70dtekn5/hpo_toolkit.egg-info/SOURCES.txt' 2024-02-13T03:46:46,667 adding license file 'LICENSE' 2024-02-13T03:46:46,671 writing manifest file '/tmp/pip-modern-metadata-70dtekn5/hpo_toolkit.egg-info/SOURCES.txt' 2024-02-13T03:46:46,672 creating '/tmp/pip-modern-metadata-70dtekn5/hpo_toolkit-0.4.2.dist-info' 2024-02-13T03:46:46,829 Preparing metadata (pyproject.toml): finished with status 'done' 2024-02-13T03:46:46,840 Source in /tmp/pip-wheel-se78hejc/hpo-toolkit_4b4f6b03acd749e18b036342b9ebfec7 has version 0.4.2, which satisfies requirement hpo-toolkit==0.4.2 from https://files.pythonhosted.org/packages/92/30/660ca0ffb6d8b0a9a3ca695dc4c2283bb2fd01b644a469aa435fa23174d1/hpo-toolkit-0.4.2.tar.gz 2024-02-13T03:46:46,841 Removed hpo-toolkit==0.4.2 from https://files.pythonhosted.org/packages/92/30/660ca0ffb6d8b0a9a3ca695dc4c2283bb2fd01b644a469aa435fa23174d1/hpo-toolkit-0.4.2.tar.gz from build tracker '/tmp/pip-build-tracker-d0vx1une' 2024-02-13T03:46:46,860 Created temporary directory: /tmp/pip-unpack-76zbj3d3 2024-02-13T03:46:46,861 Created temporary directory: /tmp/pip-unpack-kkxrgiso 2024-02-13T03:46:46,898 Building wheels for collected packages: hpo-toolkit 2024-02-13T03:46:46,904 Created temporary directory: /tmp/pip-wheel-la3t4it1 2024-02-13T03:46:46,905 Destination directory: /tmp/pip-wheel-la3t4it1 2024-02-13T03:46:46,907 Building wheel for hpo-toolkit (pyproject.toml): started 2024-02-13T03:46:46,910 Running command Building wheel for hpo-toolkit (pyproject.toml) 2024-02-13T03:46:47,382 No `packages` or `py_modules` configuration, performing automatic discovery. 2024-02-13T03:46:47,382 `src-layout` detected -- analysing ./src 2024-02-13T03:46:47,389 discovered packages -- ['hpotk', 'hpotk.annotations', 'hpotk.constants', 'hpotk.ontology', 'hpotk.graph', 'hpotk.util', 'hpotk.model', 'hpotk.algorithm', 'hpotk.validate', 'hpotk.annotations.load', 'hpotk.annotations.load.hpoa', 'hpotk.constants.hpo', 'hpotk.ontology.load', 'hpotk.ontology.load.obographs', 'hpotk.graph.csr', 'hpotk.util.sort', 'hpotk.algorithm.similarity'] 2024-02-13T03:46:47,389 discovered py_modules -- [] 2024-02-13T03:46:47,668 running bdist_wheel 2024-02-13T03:46:47,683 running build 2024-02-13T03:46:47,684 running build_py 2024-02-13T03:46:47,688 creating build 2024-02-13T03:46:47,688 creating build/lib 2024-02-13T03:46:47,689 creating build/lib/hpotk 2024-02-13T03:46:47,690 copying src/hpotk/__init__.py -> build/lib/hpotk 2024-02-13T03:46:47,692 creating build/lib/hpotk/annotations 2024-02-13T03:46:47,693 copying src/hpotk/annotations/__init__.py -> build/lib/hpotk/annotations 2024-02-13T03:46:47,696 copying src/hpotk/annotations/_test__simple.py -> build/lib/hpotk/annotations 2024-02-13T03:46:47,697 copying src/hpotk/annotations/_simple.py -> build/lib/hpotk/annotations 2024-02-13T03:46:47,699 copying src/hpotk/annotations/_api.py -> build/lib/hpotk/annotations 2024-02-13T03:46:47,701 copying src/hpotk/annotations/_base.py -> build/lib/hpotk/annotations 2024-02-13T03:46:47,703 copying src/hpotk/annotations/_test__base.py -> build/lib/hpotk/annotations 2024-02-13T03:46:47,705 creating build/lib/hpotk/constants 2024-02-13T03:46:47,706 copying src/hpotk/constants/__init__.py -> build/lib/hpotk/constants 2024-02-13T03:46:47,709 creating build/lib/hpotk/ontology 2024-02-13T03:46:47,710 copying src/hpotk/ontology/__init__.py -> build/lib/hpotk/ontology 2024-02-13T03:46:47,712 copying src/hpotk/ontology/_default.py -> build/lib/hpotk/ontology 2024-02-13T03:46:47,714 copying src/hpotk/ontology/_api.py -> build/lib/hpotk/ontology 2024-02-13T03:46:47,717 creating build/lib/hpotk/graph 2024-02-13T03:46:47,718 copying src/hpotk/graph/_test__csr_graph.py -> build/lib/hpotk/graph 2024-02-13T03:46:47,720 copying src/hpotk/graph/_test__factory.py -> build/lib/hpotk/graph 2024-02-13T03:46:47,722 copying src/hpotk/graph/_test__api.py -> build/lib/hpotk/graph 2024-02-13T03:46:47,724 copying src/hpotk/graph/_test_csr_idx_graph.py -> build/lib/hpotk/graph 2024-02-13T03:46:47,726 copying src/hpotk/graph/_factory.py -> build/lib/hpotk/graph 2024-02-13T03:46:47,729 copying src/hpotk/graph/__init__.py -> build/lib/hpotk/graph 2024-02-13T03:46:47,730 copying src/hpotk/graph/_test_data.py -> build/lib/hpotk/graph 2024-02-13T03:46:47,732 copying src/hpotk/graph/_api.py -> build/lib/hpotk/graph 2024-02-13T03:46:47,734 copying src/hpotk/graph/_csr_graph.py -> build/lib/hpotk/graph 2024-02-13T03:46:47,737 copying src/hpotk/graph/_csr_idx_graph.py -> build/lib/hpotk/graph 2024-02-13T03:46:47,739 creating build/lib/hpotk/util 2024-02-13T03:46:47,740 copying src/hpotk/util/__init__.py -> build/lib/hpotk/util 2024-02-13T03:46:47,742 copying src/hpotk/util/_io.py -> build/lib/hpotk/util 2024-02-13T03:46:47,744 copying src/hpotk/util/_validate.py -> build/lib/hpotk/util 2024-02-13T03:46:47,746 copying src/hpotk/util/_log.py -> build/lib/hpotk/util 2024-02-13T03:46:47,748 creating build/lib/hpotk/model 2024-02-13T03:46:47,749 copying src/hpotk/model/_term.py -> build/lib/hpotk/model 2024-02-13T03:46:47,752 copying src/hpotk/model/_term_id.py -> build/lib/hpotk/model 2024-02-13T03:46:47,754 copying src/hpotk/model/__init__.py -> build/lib/hpotk/model 2024-02-13T03:46:47,755 copying src/hpotk/model/_base.py -> build/lib/hpotk/model 2024-02-13T03:46:47,757 copying src/hpotk/model/_test__term_id.py -> build/lib/hpotk/model 2024-02-13T03:46:47,759 creating build/lib/hpotk/algorithm 2024-02-13T03:46:47,760 copying src/hpotk/algorithm/__init__.py -> build/lib/hpotk/algorithm 2024-02-13T03:46:47,762 copying src/hpotk/algorithm/_augment.py -> build/lib/hpotk/algorithm 2024-02-13T03:46:47,764 copying src/hpotk/algorithm/_traversal.py -> build/lib/hpotk/algorithm 2024-02-13T03:46:47,767 creating build/lib/hpotk/validate 2024-02-13T03:46:47,767 copying src/hpotk/validate/__init__.py -> build/lib/hpotk/validate 2024-02-13T03:46:47,769 copying src/hpotk/validate/_hpo.py -> build/lib/hpotk/validate 2024-02-13T03:46:47,771 copying src/hpotk/validate/_util.py -> build/lib/hpotk/validate 2024-02-13T03:46:47,773 copying src/hpotk/validate/_model.py -> build/lib/hpotk/validate 2024-02-13T03:46:47,775 creating build/lib/hpotk/annotations/load 2024-02-13T03:46:47,776 copying src/hpotk/annotations/load/__init__.py -> build/lib/hpotk/annotations/load 2024-02-13T03:46:47,778 copying src/hpotk/annotations/load/_api.py -> build/lib/hpotk/annotations/load 2024-02-13T03:46:47,781 creating build/lib/hpotk/annotations/load/hpoa 2024-02-13T03:46:47,781 copying src/hpotk/annotations/load/hpoa/__init__.py -> build/lib/hpotk/annotations/load/hpoa 2024-02-13T03:46:47,783 copying src/hpotk/annotations/load/hpoa/_test__impl.py -> build/lib/hpotk/annotations/load/hpoa 2024-02-13T03:46:47,785 copying src/hpotk/annotations/load/hpoa/_impl.py -> build/lib/hpotk/annotations/load/hpoa 2024-02-13T03:46:47,788 creating build/lib/hpotk/constants/hpo 2024-02-13T03:46:47,789 copying src/hpotk/constants/hpo/severity.py -> build/lib/hpotk/constants/hpo 2024-02-13T03:46:47,791 copying src/hpotk/constants/hpo/base.py -> build/lib/hpotk/constants/hpo 2024-02-13T03:46:47,792 copying src/hpotk/constants/hpo/inheritance.py -> build/lib/hpotk/constants/hpo 2024-02-13T03:46:47,794 copying src/hpotk/constants/hpo/__init__.py -> build/lib/hpotk/constants/hpo 2024-02-13T03:46:47,796 copying src/hpotk/constants/hpo/onset.py -> build/lib/hpotk/constants/hpo 2024-02-13T03:46:47,798 copying src/hpotk/constants/hpo/organ_system.py -> build/lib/hpotk/constants/hpo 2024-02-13T03:46:47,800 copying src/hpotk/constants/hpo/frequency.py -> build/lib/hpotk/constants/hpo 2024-02-13T03:46:47,802 creating build/lib/hpotk/ontology/load 2024-02-13T03:46:47,803 copying src/hpotk/ontology/load/__init__.py -> build/lib/hpotk/ontology/load 2024-02-13T03:46:47,805 creating build/lib/hpotk/ontology/load/obographs 2024-02-13T03:46:47,806 copying src/hpotk/ontology/load/obographs/_load.py -> build/lib/hpotk/ontology/load/obographs 2024-02-13T03:46:47,809 copying src/hpotk/ontology/load/obographs/_factory.py -> build/lib/hpotk/ontology/load/obographs 2024-02-13T03:46:47,811 copying src/hpotk/ontology/load/obographs/__init__.py -> build/lib/hpotk/ontology/load/obographs 2024-02-13T03:46:47,813 copying src/hpotk/ontology/load/obographs/_test_load.py -> build/lib/hpotk/ontology/load/obographs 2024-02-13T03:46:47,814 copying src/hpotk/ontology/load/obographs/_model.py -> build/lib/hpotk/ontology/load/obographs 2024-02-13T03:46:47,817 creating build/lib/hpotk/graph/csr 2024-02-13T03:46:47,818 copying src/hpotk/graph/csr/_csr.py -> build/lib/hpotk/graph/csr 2024-02-13T03:46:47,821 copying src/hpotk/graph/csr/__init__.py -> build/lib/hpotk/graph/csr 2024-02-13T03:46:47,823 copying src/hpotk/graph/csr/_test__csr.py -> build/lib/hpotk/graph/csr 2024-02-13T03:46:47,825 creating build/lib/hpotk/util/sort 2024-02-13T03:46:47,826 copying src/hpotk/util/sort/__init__.py -> build/lib/hpotk/util/sort 2024-02-13T03:46:47,828 copying src/hpotk/util/sort/_test__hierarchical.py -> build/lib/hpotk/util/sort 2024-02-13T03:46:47,830 copying src/hpotk/util/sort/_hierarchical.py -> build/lib/hpotk/util/sort 2024-02-13T03:46:47,832 copying src/hpotk/util/sort/_api.py -> build/lib/hpotk/util/sort 2024-02-13T03:46:47,834 creating build/lib/hpotk/algorithm/similarity 2024-02-13T03:46:47,835 copying src/hpotk/algorithm/similarity/__init__.py -> build/lib/hpotk/algorithm/similarity 2024-02-13T03:46:47,837 copying src/hpotk/algorithm/similarity/_resnik.py -> build/lib/hpotk/algorithm/similarity 2024-02-13T03:46:47,839 copying src/hpotk/algorithm/similarity/_model.py -> build/lib/hpotk/algorithm/similarity 2024-02-13T03:46:47,841 copying src/hpotk/algorithm/similarity/_ic.py -> build/lib/hpotk/algorithm/similarity 2024-02-13T03:46:47,843 running egg_info 2024-02-13T03:46:47,846 writing src/hpo_toolkit.egg-info/PKG-INFO 2024-02-13T03:46:47,853 writing dependency_links to src/hpo_toolkit.egg-info/dependency_links.txt 2024-02-13T03:46:47,856 writing requirements to src/hpo_toolkit.egg-info/requires.txt 2024-02-13T03:46:47,857 writing top-level names to src/hpo_toolkit.egg-info/top_level.txt 2024-02-13T03:46:47,877 reading manifest file 'src/hpo_toolkit.egg-info/SOURCES.txt' 2024-02-13T03:46:47,880 adding license file 'LICENSE' 2024-02-13T03:46:47,884 writing manifest file 'src/hpo_toolkit.egg-info/SOURCES.txt' 2024-02-13T03:46:47,906 installing to build/bdist.linux-armv7l/wheel 2024-02-13T03:46:47,907 running install 2024-02-13T03:46:47,930 running install_lib 2024-02-13T03:46:47,934 creating build/bdist.linux-armv7l 2024-02-13T03:46:47,935 creating build/bdist.linux-armv7l/wheel 2024-02-13T03:46:47,936 creating build/bdist.linux-armv7l/wheel/hpotk 2024-02-13T03:46:47,938 creating build/bdist.linux-armv7l/wheel/hpotk/annotations 2024-02-13T03:46:47,939 creating build/bdist.linux-armv7l/wheel/hpotk/annotations/load 2024-02-13T03:46:47,941 creating build/bdist.linux-armv7l/wheel/hpotk/annotations/load/hpoa 2024-02-13T03:46:47,942 copying build/lib/hpotk/annotations/load/hpoa/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/annotations/load/hpoa 2024-02-13T03:46:47,944 copying build/lib/hpotk/annotations/load/hpoa/_test__impl.py -> build/bdist.linux-armv7l/wheel/hpotk/annotations/load/hpoa 2024-02-13T03:46:47,945 copying build/lib/hpotk/annotations/load/hpoa/_impl.py -> build/bdist.linux-armv7l/wheel/hpotk/annotations/load/hpoa 2024-02-13T03:46:47,948 copying build/lib/hpotk/annotations/load/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/annotations/load 2024-02-13T03:46:47,949 copying build/lib/hpotk/annotations/load/_api.py -> build/bdist.linux-armv7l/wheel/hpotk/annotations/load 2024-02-13T03:46:47,951 copying build/lib/hpotk/annotations/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/annotations 2024-02-13T03:46:47,953 copying build/lib/hpotk/annotations/_test__simple.py -> build/bdist.linux-armv7l/wheel/hpotk/annotations 2024-02-13T03:46:47,955 copying build/lib/hpotk/annotations/_simple.py -> build/bdist.linux-armv7l/wheel/hpotk/annotations 2024-02-13T03:46:47,957 copying build/lib/hpotk/annotations/_api.py -> build/bdist.linux-armv7l/wheel/hpotk/annotations 2024-02-13T03:46:47,959 copying build/lib/hpotk/annotations/_base.py -> build/bdist.linux-armv7l/wheel/hpotk/annotations 2024-02-13T03:46:47,961 copying build/lib/hpotk/annotations/_test__base.py -> build/bdist.linux-armv7l/wheel/hpotk/annotations 2024-02-13T03:46:47,963 creating build/bdist.linux-armv7l/wheel/hpotk/constants 2024-02-13T03:46:47,964 creating build/bdist.linux-armv7l/wheel/hpotk/constants/hpo 2024-02-13T03:46:47,965 copying build/lib/hpotk/constants/hpo/severity.py -> build/bdist.linux-armv7l/wheel/hpotk/constants/hpo 2024-02-13T03:46:47,967 copying build/lib/hpotk/constants/hpo/base.py -> build/bdist.linux-armv7l/wheel/hpotk/constants/hpo 2024-02-13T03:46:47,969 copying build/lib/hpotk/constants/hpo/inheritance.py -> build/bdist.linux-armv7l/wheel/hpotk/constants/hpo 2024-02-13T03:46:47,971 copying build/lib/hpotk/constants/hpo/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/constants/hpo 2024-02-13T03:46:47,972 copying build/lib/hpotk/constants/hpo/onset.py -> build/bdist.linux-armv7l/wheel/hpotk/constants/hpo 2024-02-13T03:46:47,974 copying build/lib/hpotk/constants/hpo/organ_system.py -> build/bdist.linux-armv7l/wheel/hpotk/constants/hpo 2024-02-13T03:46:47,976 copying build/lib/hpotk/constants/hpo/frequency.py -> build/bdist.linux-armv7l/wheel/hpotk/constants/hpo 2024-02-13T03:46:47,978 copying build/lib/hpotk/constants/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/constants 2024-02-13T03:46:47,980 creating build/bdist.linux-armv7l/wheel/hpotk/ontology 2024-02-13T03:46:47,981 creating build/bdist.linux-armv7l/wheel/hpotk/ontology/load 2024-02-13T03:46:47,982 creating build/bdist.linux-armv7l/wheel/hpotk/ontology/load/obographs 2024-02-13T03:46:47,983 copying build/lib/hpotk/ontology/load/obographs/_load.py -> build/bdist.linux-armv7l/wheel/hpotk/ontology/load/obographs 2024-02-13T03:46:47,986 copying build/lib/hpotk/ontology/load/obographs/_factory.py -> build/bdist.linux-armv7l/wheel/hpotk/ontology/load/obographs 2024-02-13T03:46:47,988 copying build/lib/hpotk/ontology/load/obographs/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/ontology/load/obographs 2024-02-13T03:46:47,990 copying build/lib/hpotk/ontology/load/obographs/_test_load.py -> build/bdist.linux-armv7l/wheel/hpotk/ontology/load/obographs 2024-02-13T03:46:47,991 copying build/lib/hpotk/ontology/load/obographs/_model.py -> build/bdist.linux-armv7l/wheel/hpotk/ontology/load/obographs 2024-02-13T03:46:47,994 copying build/lib/hpotk/ontology/load/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/ontology/load 2024-02-13T03:46:47,995 copying build/lib/hpotk/ontology/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/ontology 2024-02-13T03:46:47,997 copying build/lib/hpotk/ontology/_default.py -> build/bdist.linux-armv7l/wheel/hpotk/ontology 2024-02-13T03:46:47,999 copying build/lib/hpotk/ontology/_api.py -> build/bdist.linux-armv7l/wheel/hpotk/ontology 2024-02-13T03:46:48,002 creating build/bdist.linux-armv7l/wheel/hpotk/graph 2024-02-13T03:46:48,003 copying build/lib/hpotk/graph/_test__csr_graph.py -> build/bdist.linux-armv7l/wheel/hpotk/graph 2024-02-13T03:46:48,005 copying build/lib/hpotk/graph/_test__factory.py -> build/bdist.linux-armv7l/wheel/hpotk/graph 2024-02-13T03:46:48,007 copying build/lib/hpotk/graph/_test__api.py -> build/bdist.linux-armv7l/wheel/hpotk/graph 2024-02-13T03:46:48,009 copying build/lib/hpotk/graph/_test_csr_idx_graph.py -> build/bdist.linux-armv7l/wheel/hpotk/graph 2024-02-13T03:46:48,011 copying build/lib/hpotk/graph/_factory.py -> build/bdist.linux-armv7l/wheel/hpotk/graph 2024-02-13T03:46:48,013 copying build/lib/hpotk/graph/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/graph 2024-02-13T03:46:48,015 copying build/lib/hpotk/graph/_test_data.py -> build/bdist.linux-armv7l/wheel/hpotk/graph 2024-02-13T03:46:48,017 copying build/lib/hpotk/graph/_api.py -> build/bdist.linux-armv7l/wheel/hpotk/graph 2024-02-13T03:46:48,019 copying build/lib/hpotk/graph/_csr_graph.py -> build/bdist.linux-armv7l/wheel/hpotk/graph 2024-02-13T03:46:48,022 creating build/bdist.linux-armv7l/wheel/hpotk/graph/csr 2024-02-13T03:46:48,023 copying build/lib/hpotk/graph/csr/_csr.py -> build/bdist.linux-armv7l/wheel/hpotk/graph/csr 2024-02-13T03:46:48,025 copying build/lib/hpotk/graph/csr/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/graph/csr 2024-02-13T03:46:48,027 copying build/lib/hpotk/graph/csr/_test__csr.py -> build/bdist.linux-armv7l/wheel/hpotk/graph/csr 2024-02-13T03:46:48,029 copying build/lib/hpotk/graph/_csr_idx_graph.py -> build/bdist.linux-armv7l/wheel/hpotk/graph 2024-02-13T03:46:48,032 creating build/bdist.linux-armv7l/wheel/hpotk/util 2024-02-13T03:46:48,033 creating build/bdist.linux-armv7l/wheel/hpotk/util/sort 2024-02-13T03:46:48,034 copying build/lib/hpotk/util/sort/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/util/sort 2024-02-13T03:46:48,036 copying build/lib/hpotk/util/sort/_test__hierarchical.py -> build/bdist.linux-armv7l/wheel/hpotk/util/sort 2024-02-13T03:46:48,037 copying build/lib/hpotk/util/sort/_hierarchical.py -> build/bdist.linux-armv7l/wheel/hpotk/util/sort 2024-02-13T03:46:48,040 copying build/lib/hpotk/util/sort/_api.py -> build/bdist.linux-armv7l/wheel/hpotk/util/sort 2024-02-13T03:46:48,041 copying build/lib/hpotk/util/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/util 2024-02-13T03:46:48,043 copying build/lib/hpotk/util/_io.py -> build/bdist.linux-armv7l/wheel/hpotk/util 2024-02-13T03:46:48,045 copying build/lib/hpotk/util/_validate.py -> build/bdist.linux-armv7l/wheel/hpotk/util 2024-02-13T03:46:48,047 copying build/lib/hpotk/util/_log.py -> build/bdist.linux-armv7l/wheel/hpotk/util 2024-02-13T03:46:48,049 creating build/bdist.linux-armv7l/wheel/hpotk/model 2024-02-13T03:46:48,050 copying build/lib/hpotk/model/_term.py -> build/bdist.linux-armv7l/wheel/hpotk/model 2024-02-13T03:46:48,053 copying build/lib/hpotk/model/_term_id.py -> build/bdist.linux-armv7l/wheel/hpotk/model 2024-02-13T03:46:48,055 copying build/lib/hpotk/model/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/model 2024-02-13T03:46:48,056 copying build/lib/hpotk/model/_base.py -> build/bdist.linux-armv7l/wheel/hpotk/model 2024-02-13T03:46:48,058 copying build/lib/hpotk/model/_test__term_id.py -> build/bdist.linux-armv7l/wheel/hpotk/model 2024-02-13T03:46:48,060 copying build/lib/hpotk/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk 2024-02-13T03:46:48,063 creating build/bdist.linux-armv7l/wheel/hpotk/algorithm 2024-02-13T03:46:48,064 copying build/lib/hpotk/algorithm/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/algorithm 2024-02-13T03:46:48,065 copying build/lib/hpotk/algorithm/_augment.py -> build/bdist.linux-armv7l/wheel/hpotk/algorithm 2024-02-13T03:46:48,068 creating build/bdist.linux-armv7l/wheel/hpotk/algorithm/similarity 2024-02-13T03:46:48,069 copying build/lib/hpotk/algorithm/similarity/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/algorithm/similarity 2024-02-13T03:46:48,070 copying build/lib/hpotk/algorithm/similarity/_resnik.py -> build/bdist.linux-armv7l/wheel/hpotk/algorithm/similarity 2024-02-13T03:46:48,072 copying build/lib/hpotk/algorithm/similarity/_model.py -> build/bdist.linux-armv7l/wheel/hpotk/algorithm/similarity 2024-02-13T03:46:48,074 copying build/lib/hpotk/algorithm/similarity/_ic.py -> build/bdist.linux-armv7l/wheel/hpotk/algorithm/similarity 2024-02-13T03:46:48,077 copying build/lib/hpotk/algorithm/_traversal.py -> build/bdist.linux-armv7l/wheel/hpotk/algorithm 2024-02-13T03:46:48,080 creating build/bdist.linux-armv7l/wheel/hpotk/validate 2024-02-13T03:46:48,081 copying build/lib/hpotk/validate/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/validate 2024-02-13T03:46:48,083 copying build/lib/hpotk/validate/_hpo.py -> build/bdist.linux-armv7l/wheel/hpotk/validate 2024-02-13T03:46:48,085 copying build/lib/hpotk/validate/_util.py -> build/bdist.linux-armv7l/wheel/hpotk/validate 2024-02-13T03:46:48,088 copying build/lib/hpotk/validate/_model.py -> build/bdist.linux-armv7l/wheel/hpotk/validate 2024-02-13T03:46:48,089 running install_egg_info 2024-02-13T03:46:48,093 Copying src/hpo_toolkit.egg-info to build/bdist.linux-armv7l/wheel/hpo_toolkit-0.4.2-py3.11.egg-info 2024-02-13T03:46:48,105 running install_scripts 2024-02-13T03:46:48,127 creating build/bdist.linux-armv7l/wheel/hpo_toolkit-0.4.2.dist-info/WHEEL 2024-02-13T03:46:48,130 creating '/tmp/pip-wheel-la3t4it1/.tmp-dgpptgfc/hpo_toolkit-0.4.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-02-13T03:46:48,132 adding 'hpotk/__init__.py' 2024-02-13T03:46:48,134 adding 'hpotk/algorithm/__init__.py' 2024-02-13T03:46:48,136 adding 'hpotk/algorithm/_augment.py' 2024-02-13T03:46:48,137 adding 'hpotk/algorithm/_traversal.py' 2024-02-13T03:46:48,139 adding 'hpotk/algorithm/similarity/__init__.py' 2024-02-13T03:46:48,140 adding 'hpotk/algorithm/similarity/_ic.py' 2024-02-13T03:46:48,142 adding 'hpotk/algorithm/similarity/_model.py' 2024-02-13T03:46:48,143 adding 'hpotk/algorithm/similarity/_resnik.py' 2024-02-13T03:46:48,145 adding 'hpotk/annotations/__init__.py' 2024-02-13T03:46:48,146 adding 'hpotk/annotations/_api.py' 2024-02-13T03:46:48,147 adding 'hpotk/annotations/_base.py' 2024-02-13T03:46:48,149 adding 'hpotk/annotations/_simple.py' 2024-02-13T03:46:48,150 adding 'hpotk/annotations/_test__base.py' 2024-02-13T03:46:48,151 adding 'hpotk/annotations/_test__simple.py' 2024-02-13T03:46:48,152 adding 'hpotk/annotations/load/__init__.py' 2024-02-13T03:46:48,153 adding 'hpotk/annotations/load/_api.py' 2024-02-13T03:46:48,155 adding 'hpotk/annotations/load/hpoa/__init__.py' 2024-02-13T03:46:48,157 adding 'hpotk/annotations/load/hpoa/_impl.py' 2024-02-13T03:46:48,158 adding 'hpotk/annotations/load/hpoa/_test__impl.py' 2024-02-13T03:46:48,160 adding 'hpotk/constants/__init__.py' 2024-02-13T03:46:48,161 adding 'hpotk/constants/hpo/__init__.py' 2024-02-13T03:46:48,162 adding 'hpotk/constants/hpo/base.py' 2024-02-13T03:46:48,164 adding 'hpotk/constants/hpo/frequency.py' 2024-02-13T03:46:48,165 adding 'hpotk/constants/hpo/inheritance.py' 2024-02-13T03:46:48,166 adding 'hpotk/constants/hpo/onset.py' 2024-02-13T03:46:48,167 adding 'hpotk/constants/hpo/organ_system.py' 2024-02-13T03:46:48,168 adding 'hpotk/constants/hpo/severity.py' 2024-02-13T03:46:48,170 adding 'hpotk/graph/__init__.py' 2024-02-13T03:46:48,172 adding 'hpotk/graph/_api.py' 2024-02-13T03:46:48,173 adding 'hpotk/graph/_csr_graph.py' 2024-02-13T03:46:48,175 adding 'hpotk/graph/_csr_idx_graph.py' 2024-02-13T03:46:48,177 adding 'hpotk/graph/_factory.py' 2024-02-13T03:46:48,179 adding 'hpotk/graph/_test__api.py' 2024-02-13T03:46:48,180 adding 'hpotk/graph/_test__csr_graph.py' 2024-02-13T03:46:48,182 adding 'hpotk/graph/_test__factory.py' 2024-02-13T03:46:48,183 adding 'hpotk/graph/_test_csr_idx_graph.py' 2024-02-13T03:46:48,184 adding 'hpotk/graph/_test_data.py' 2024-02-13T03:46:48,186 adding 'hpotk/graph/csr/__init__.py' 2024-02-13T03:46:48,188 adding 'hpotk/graph/csr/_csr.py' 2024-02-13T03:46:48,189 adding 'hpotk/graph/csr/_test__csr.py' 2024-02-13T03:46:48,191 adding 'hpotk/model/__init__.py' 2024-02-13T03:46:48,192 adding 'hpotk/model/_base.py' 2024-02-13T03:46:48,194 adding 'hpotk/model/_term.py' 2024-02-13T03:46:48,196 adding 'hpotk/model/_term_id.py' 2024-02-13T03:46:48,197 adding 'hpotk/model/_test__term_id.py' 2024-02-13T03:46:48,199 adding 'hpotk/ontology/__init__.py' 2024-02-13T03:46:48,200 adding 'hpotk/ontology/_api.py' 2024-02-13T03:46:48,202 adding 'hpotk/ontology/_default.py' 2024-02-13T03:46:48,203 adding 'hpotk/ontology/load/__init__.py' 2024-02-13T03:46:48,205 adding 'hpotk/ontology/load/obographs/__init__.py' 2024-02-13T03:46:48,207 adding 'hpotk/ontology/load/obographs/_factory.py' 2024-02-13T03:46:48,209 adding 'hpotk/ontology/load/obographs/_load.py' 2024-02-13T03:46:48,210 adding 'hpotk/ontology/load/obographs/_model.py' 2024-02-13T03:46:48,211 adding 'hpotk/ontology/load/obographs/_test_load.py' 2024-02-13T03:46:48,213 adding 'hpotk/util/__init__.py' 2024-02-13T03:46:48,215 adding 'hpotk/util/_io.py' 2024-02-13T03:46:48,216 adding 'hpotk/util/_log.py' 2024-02-13T03:46:48,217 adding 'hpotk/util/_validate.py' 2024-02-13T03:46:48,219 adding 'hpotk/util/sort/__init__.py' 2024-02-13T03:46:48,220 adding 'hpotk/util/sort/_api.py' 2024-02-13T03:46:48,222 adding 'hpotk/util/sort/_hierarchical.py' 2024-02-13T03:46:48,224 adding 'hpotk/util/sort/_test__hierarchical.py' 2024-02-13T03:46:48,226 adding 'hpotk/validate/__init__.py' 2024-02-13T03:46:48,227 adding 'hpotk/validate/_hpo.py' 2024-02-13T03:46:48,229 adding 'hpotk/validate/_model.py' 2024-02-13T03:46:48,230 adding 'hpotk/validate/_util.py' 2024-02-13T03:46:48,236 adding 'hpo_toolkit-0.4.2.dist-info/LICENSE' 2024-02-13T03:46:48,243 adding 'hpo_toolkit-0.4.2.dist-info/METADATA' 2024-02-13T03:46:48,244 adding 'hpo_toolkit-0.4.2.dist-info/WHEEL' 2024-02-13T03:46:48,245 adding 'hpo_toolkit-0.4.2.dist-info/top_level.txt' 2024-02-13T03:46:48,247 adding 'hpo_toolkit-0.4.2.dist-info/RECORD' 2024-02-13T03:46:48,250 removing build/bdist.linux-armv7l/wheel 2024-02-13T03:46:48,391 Building wheel for hpo-toolkit (pyproject.toml): finished with status 'done' 2024-02-13T03:46:48,399 Created wheel for hpo-toolkit: filename=hpo_toolkit-0.4.2-py3-none-any.whl size=101017 sha256=21d069851d9e223e09e1031596d1c9a056b1fa407ba921599bf6e18c5863c50f 2024-02-13T03:46:48,400 Stored in directory: /tmp/pip-ephem-wheel-cache-6frg2iez/wheels/4b/14/df/fce2ef652a43fd40591f1224069119b900f3c8c0cd530e664b 2024-02-13T03:46:48,434 Successfully built hpo-toolkit 2024-02-13T03:46:48,439 Removed build tracker: '/tmp/pip-build-tracker-d0vx1une'