2024-02-13T04:54:28,037 Created temporary directory: /tmp/pip-build-tracker-tbo_bsdo 2024-02-13T04:54:28,038 Initialized build tracking at /tmp/pip-build-tracker-tbo_bsdo 2024-02-13T04:54:28,039 Created build tracker: /tmp/pip-build-tracker-tbo_bsdo 2024-02-13T04:54:28,039 Entered build tracker: /tmp/pip-build-tracker-tbo_bsdo 2024-02-13T04:54:28,040 Created temporary directory: /tmp/pip-wheel-rp4womle 2024-02-13T04:54:28,043 Created temporary directory: /tmp/pip-ephem-wheel-cache-zfpiimq_ 2024-02-13T04:54:28,065 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-02-13T04:54:28,069 2 location(s) to search for versions of hpo-toolkit: 2024-02-13T04:54:28,069 * https://pypi.org/simple/hpo-toolkit/ 2024-02-13T04:54:28,069 * https://www.piwheels.org/simple/hpo-toolkit/ 2024-02-13T04:54:28,069 Fetching project page and analyzing links: https://pypi.org/simple/hpo-toolkit/ 2024-02-13T04:54:28,070 Getting page https://pypi.org/simple/hpo-toolkit/ 2024-02-13T04:54:28,072 Found index url https://pypi.org/simple/ 2024-02-13T04:54:28,290 Fetched page https://pypi.org/simple/hpo-toolkit/ as application/vnd.pypi.simple.v1+json 2024-02-13T04:54:28,297 Found link https://files.pythonhosted.org/packages/ca/a8/711d9dcbd5ce3032c2b87c17d4cea73a92d72373279a6797104f385fe772/hpo-toolkit-0.0.1.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8), version: 0.0.1 2024-02-13T04:54:28,298 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/db/4b/fefdb80f7fc92b4582605f934105959e44e73fb42593df986e489b48c639/hpo_toolkit-0.0.1-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T04:54:28,299 Found link https://files.pythonhosted.org/packages/97/03/7730068713319df3faff2ee4bfe9f79b27291dcc2aa52bf7e6cbc08037b4/hpo-toolkit-0.1.0.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8), version: 0.1.0 2024-02-13T04:54:28,299 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/bc/0f/b3d21a75ade171e203465bcd9bacd5ca53c26c9e9a822ba73ff46a93c30c/hpo_toolkit-0.1.0-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T04:54:28,300 Found link https://files.pythonhosted.org/packages/e2/e6/36ad8215b6c614fef18509b652c2dd66fd3ce6797d7b7d75a35609935505/hpo-toolkit-0.1.1.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8), version: 0.1.1 2024-02-13T04:54:28,301 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/fe/75/20ad6e1322bd96a826c2125746ef2e8d89a74a62c3cd0ba10d96fd3cd358/hpo_toolkit-0.1.1-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T04:54:28,302 Found link https://files.pythonhosted.org/packages/5f/45/51e64d48d20318801db3281d747451f60a876ec457ce063923c7cad89c6a/hpo-toolkit-0.1.2.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.6), version: 0.1.2 2024-02-13T04:54:28,303 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/58/3f/1209266429cf4dd4c4ee136ba4ca3bb4aa9a6ab9429cab80d418d46b220c/hpo_toolkit-0.1.2-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.6) 2024-02-13T04:54:28,304 Found link https://files.pythonhosted.org/packages/fa/5f/eb46e3989329c498db93b7160015714202b11ef1818132264622eef9c552/hpo-toolkit-0.1.3.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.6), version: 0.1.3 2024-02-13T04:54:28,305 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/6c/e7/915925e63777254fbde62a3cf37a0f2110368cae8aac1f4274845afe3671/hpo_toolkit-0.1.3-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.6) 2024-02-13T04:54:28,306 Found link https://files.pythonhosted.org/packages/2e/2e/0768b54f6992c5032825950a595ee00db58999c493c4e6763b61eeaa68c5/hpo-toolkit-0.1.3.post0.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.6), version: 0.1.3.post0 2024-02-13T04:54:28,307 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/1d/8a/0ad17020c77918897b9eed16d237bedd1ecc7c4a020c52b28cd46a3c21bb/hpo_toolkit-0.1.3.post0-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.6) 2024-02-13T04:54:28,308 Found link https://files.pythonhosted.org/packages/7b/1a/8fa1f88a56555956f4999c1fa51be406293df8d965deb1d600ddf885b298/hpo-toolkit-0.1.4.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.6), version: 0.1.4 2024-02-13T04:54:28,309 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/ca/19/7a1fc7b879a91d9f6c7bd92a93a4de737aa3436176954b6fbf6323e1866b/hpo_toolkit-0.1.4-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.6) 2024-02-13T04:54:28,310 Found link https://files.pythonhosted.org/packages/03/82/910c6f0cd8ce4491c883f4097599e66ce693ad1ed56ab09cc7885388cc78/hpo-toolkit-0.1.5.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8), version: 0.1.5 2024-02-13T04:54:28,310 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/aa/8a/753d7b3cb675dad2fd8a0d75a135b0f548c006d01919386df501b67bc8ad/hpo_toolkit-0.1.5-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T04:54:28,311 Found link https://files.pythonhosted.org/packages/71/cf/074d90cdcf4f7b778a2d8aa06b80b2b40a4e582a54cb2643a5780f9586f6/hpo-toolkit-0.2.0.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8), version: 0.2.0 2024-02-13T04:54:28,312 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/eb/d0/34e5f1b6dce3bd47efa08fddd21e029e1a250e622d54da017c622d4754d7/hpo_toolkit-0.2.0-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T04:54:28,313 Found link https://files.pythonhosted.org/packages/0d/da/6a30a4dac46348e6c897cbe157bb6c484859ee5a094a6dc4660079e16e52/hpo-toolkit-0.3.0.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8), version: 0.3.0 2024-02-13T04:54:28,313 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/f9/69/21cad5b039ce5f982af72b519c730edc1883541f1ce7b83aa4d944551726/hpo_toolkit-0.3.0-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T04:54:28,314 Found link https://files.pythonhosted.org/packages/4e/1e/7e89ef9ee960aaf9bd47076a3d609f2db6ced321b40f386c39964a2a3e66/hpo-toolkit-0.3.1.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8), version: 0.3.1 2024-02-13T04:54:28,315 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/74/13/b1184c5741050c469a59b1bb2cc6226a477403c796f9cea285e033205a43/hpo_toolkit-0.3.1-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T04:54:28,316 Found link https://files.pythonhosted.org/packages/13/87/fead1e6a0c2a0c627cd3a5b352e9a5127a1e0642c3b5267bba23cbeb1eea/hpo-toolkit-0.3.1.post1.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8), version: 0.3.1.post1 2024-02-13T04:54:28,317 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/f5/cb/8d8f4cba86bd715cda9e04fde1c42dc07ada54d0d5fc0d894a65bccd49fa/hpo_toolkit-0.3.1.post1-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T04:54:28,318 Found link https://files.pythonhosted.org/packages/28/45/ed2418d7620e37c2e30b6d938e303b3c1351817a8f4accaa916cb8b58681/hpo-toolkit-0.4.0.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8), version: 0.4.0 2024-02-13T04:54:28,318 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/23/c2/8ff4702e80a1a4520b20eb095a2bf830c05cd71d22e04619280a7e344623/hpo_toolkit-0.4.0-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T04:54:28,319 Found link https://files.pythonhosted.org/packages/9e/94/0d26447d77727c706189102af3280fc9a2f1e5ea935af300975b34259026/hpo-toolkit-0.4.1.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8), version: 0.4.1 2024-02-13T04:54:28,320 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/2c/04/25eedae16433a42f54989ac2447af2d3a26fb3e498ef33bc2606d00ee73a/hpo_toolkit-0.4.1-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T04:54:28,321 Found link https://files.pythonhosted.org/packages/92/30/660ca0ffb6d8b0a9a3ca695dc4c2283bb2fd01b644a469aa435fa23174d1/hpo-toolkit-0.4.2.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8), version: 0.4.2 2024-02-13T04:54:28,322 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/09/5a/e3036f822206db3ae13d3be9c52e3daf331f32efbc83a8de1228ab53f50a/hpo_toolkit-0.4.2-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T04:54:28,322 Found link https://files.pythonhosted.org/packages/8b/7a/50e9d93aef25d7467d30a9df6e4154c5bc0b712577486a7d613b554ab0d6/hpo-toolkit-0.4.3.tar.gz (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8), version: 0.4.3 2024-02-13T04:54:28,323 Skipping link: No binaries permitted for hpo-toolkit: https://files.pythonhosted.org/packages/c2/0f/c558cf50e4598a5aeefcced9bfff1abf8a75554cb8facf22563d728de88a/hpo_toolkit-0.4.3-py3-none-any.whl (from https://pypi.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T04:54:28,323 Fetching project page and analyzing links: https://www.piwheels.org/simple/hpo-toolkit/ 2024-02-13T04:54:28,324 Getting page https://www.piwheels.org/simple/hpo-toolkit/ 2024-02-13T04:54:28,325 Found index url https://www.piwheels.org/simple/ 2024-02-13T04:54:28,482 Fetched page https://www.piwheels.org/simple/hpo-toolkit/ as text/html 2024-02-13T04:54:28,487 Skipping link: No binaries permitted for hpo-toolkit: https://www.piwheels.org/simple/hpo-toolkit/hpo_toolkit-0.4.2-py3-none-any.whl#sha256=21d069851d9e223e09e1031596d1c9a056b1fa407ba921599bf6e18c5863c50f (from https://www.piwheels.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T04:54:28,488 Skipping link: No binaries permitted for hpo-toolkit: 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https://www.piwheels.org/simple/hpo-toolkit/hpo_toolkit-0.3.1-py3-none-any.whl#sha256=6a8d30254bde87514de60736ddfe07dbf2eba8bb236c59ed84dc356854115d9f (from https://www.piwheels.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T04:54:28,491 Skipping link: No binaries permitted for hpo-toolkit: https://www.piwheels.org/simple/hpo-toolkit/hpo_toolkit-0.3.0-py3-none-any.whl#sha256=94c380a687b421287a3b9501925763501a059abe8e34cfe0677cb6dc9f08d904 (from https://www.piwheels.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T04:54:28,491 Skipping link: No binaries permitted for hpo-toolkit: https://www.piwheels.org/simple/hpo-toolkit/hpo_toolkit-0.2.0-py3-none-any.whl#sha256=c065aea0a8649fab99c42495f74a956cdfd23e8ae8c1d403cbda42afbe112c4b (from https://www.piwheels.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T04:54:28,492 Skipping link: No binaries permitted for hpo-toolkit: https://www.piwheels.org/simple/hpo-toolkit/hpo_toolkit-0.1.5-py3-none-any.whl#sha256=4cb774e88cfdf25a2f255192ed801ae0ad6a75b9a047d88af63699be9ba6751d (from https://www.piwheels.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T04:54:28,493 Skipping link: No binaries permitted for hpo-toolkit: https://www.piwheels.org/simple/hpo-toolkit/hpo_toolkit-0.1.4-py3-none-any.whl#sha256=025c22c02ffea2ead1745b016d38971c592e4830c5a9c00abf7994f92cbe5640 (from https://www.piwheels.org/simple/hpo-toolkit/) (requires-python:>=3.6) 2024-02-13T04:54:28,493 Skipping link: No binaries permitted for hpo-toolkit: https://www.piwheels.org/simple/hpo-toolkit/hpo_toolkit-0.1.3.post0-py3-none-any.whl#sha256=18ee8da29a052f43b699b468fd06b408f120009588fffbe58553bc4ba143c6a2 (from https://www.piwheels.org/simple/hpo-toolkit/) (requires-python:>=3.6) 2024-02-13T04:54:28,493 Skipping link: No binaries permitted for hpo-toolkit: https://www.piwheels.org/simple/hpo-toolkit/hpo_toolkit-0.1.3-py3-none-any.whl#sha256=f00d3839e2e2771a1a367a28f4c4cd683421b6945f35798e4f16347b307fb728 (from https://www.piwheels.org/simple/hpo-toolkit/) (requires-python:>=3.6) 2024-02-13T04:54:28,494 Skipping link: No binaries permitted for hpo-toolkit: https://www.piwheels.org/simple/hpo-toolkit/hpo_toolkit-0.1.2-py3-none-any.whl#sha256=7098761793b2f1fde0dbf8f218e3a42721d05b1443d2405a7b7f7717768f7bdc (from https://www.piwheels.org/simple/hpo-toolkit/) (requires-python:>=3.6) 2024-02-13T04:54:28,494 Skipping link: No binaries permitted for hpo-toolkit: https://www.piwheels.org/simple/hpo-toolkit/hpo_toolkit-0.1.1-py3-none-any.whl#sha256=fc1c6e36d51bbdf8cbcc2cee69652c17601fde5f38bffd6a2de33043de5833c6 (from https://www.piwheels.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T04:54:28,495 Skipping link: No binaries permitted for hpo-toolkit: https://www.piwheels.org/simple/hpo-toolkit/hpo_toolkit-0.1.0-py3-none-any.whl#sha256=281377094b0839266141544d8b624f66426ef3bfd3ab32665265c4daef22c016 (from https://www.piwheels.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T04:54:28,496 Skipping link: No binaries permitted for hpo-toolkit: https://www.piwheels.org/simple/hpo-toolkit/hpo_toolkit-0.0.1-py3-none-any.whl#sha256=1f7dded9eaafd70bfca08fc03a34551b611fe805d4b8aed4594d587bab9b9ee3 (from https://www.piwheels.org/simple/hpo-toolkit/) (requires-python:>=3.8) 2024-02-13T04:54:28,496 Skipping link: not a file: https://www.piwheels.org/simple/hpo-toolkit/ 2024-02-13T04:54:28,497 Skipping link: not a file: https://pypi.org/simple/hpo-toolkit/ 2024-02-13T04:54:28,517 Given no hashes to check 1 links for project 'hpo-toolkit': discarding no candidates 2024-02-13T04:54:28,535 Collecting hpo-toolkit==0.4.3 2024-02-13T04:54:28,537 Created temporary directory: /tmp/pip-unpack-pr_m7rzm 2024-02-13T04:54:28,753 Downloading hpo-toolkit-0.4.3.tar.gz (96 kB) 2024-02-13T04:54:28,974 Added hpo-toolkit==0.4.3 from https://files.pythonhosted.org/packages/8b/7a/50e9d93aef25d7467d30a9df6e4154c5bc0b712577486a7d613b554ab0d6/hpo-toolkit-0.4.3.tar.gz to build tracker '/tmp/pip-build-tracker-tbo_bsdo' 2024-02-13T04:54:28,978 Created temporary directory: /tmp/pip-build-env-73zbl7yc 2024-02-13T04:54:28,983 Installing build dependencies: started 2024-02-13T04:54:28,984 Running command pip subprocess to install build dependencies 2024-02-13T04:54:30,117 Using pip 23.3.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-02-13T04:54:30,618 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-02-13T04:54:32,023 Collecting setuptools>=65.6.3 2024-02-13T04:54:32,037 Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.1.0-py3-none-any.whl (819 kB) 2024-02-13T04:54:34,625 Installing collected packages: setuptools 2024-02-13T04:54:36,926 Successfully installed setuptools-69.1.0 2024-02-13T04:54:37,177 [notice] A new release of pip is available: 23.3.1 -> 24.0 2024-02-13T04:54:37,178 [notice] To update, run: python3 -m pip install --upgrade pip 2024-02-13T04:54:37,438 Installing build dependencies: finished with status 'done' 2024-02-13T04:54:37,442 Getting requirements to build wheel: started 2024-02-13T04:54:37,443 Running command Getting requirements to build wheel 2024-02-13T04:54:37,949 No `packages` or `py_modules` configuration, performing automatic discovery. 2024-02-13T04:54:37,949 `src-layout` detected -- analysing ./src 2024-02-13T04:54:37,960 discovered packages -- ['hpotk', 'hpotk.model', 'hpotk.annotations', 'hpotk.validate', 'hpotk.graph', 'hpotk.algorithm', 'hpotk.ontology', 'hpotk.constants', 'hpotk.util', 'hpotk.annotations.load', 'hpotk.annotations.load.hpoa', 'hpotk.graph.csr', 'hpotk.algorithm.similarity', 'hpotk.ontology.load', 'hpotk.ontology.load.obographs', 'hpotk.constants.hpo', 'hpotk.util.sort'] 2024-02-13T04:54:37,961 discovered py_modules -- [] 2024-02-13T04:54:38,205 running egg_info 2024-02-13T04:54:38,209 writing src/hpo_toolkit.egg-info/PKG-INFO 2024-02-13T04:54:38,216 writing dependency_links to src/hpo_toolkit.egg-info/dependency_links.txt 2024-02-13T04:54:38,220 writing requirements to src/hpo_toolkit.egg-info/requires.txt 2024-02-13T04:54:38,221 writing top-level names to src/hpo_toolkit.egg-info/top_level.txt 2024-02-13T04:54:38,251 reading manifest file 'src/hpo_toolkit.egg-info/SOURCES.txt' 2024-02-13T04:54:38,254 adding license file 'LICENSE' 2024-02-13T04:54:38,258 writing manifest file 'src/hpo_toolkit.egg-info/SOURCES.txt' 2024-02-13T04:54:38,369 Getting requirements to build wheel: finished with status 'done' 2024-02-13T04:54:38,377 Installing backend dependencies: started 2024-02-13T04:54:38,378 Running command pip subprocess to install backend dependencies 2024-02-13T04:54:39,512 Using pip 23.3.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-02-13T04:54:40,012 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-02-13T04:54:40,501 Collecting wheel 2024-02-13T04:54:40,526 Using cached https://www.piwheels.org/simple/wheel/wheel-0.42.0-py3-none-any.whl (65 kB) 2024-02-13T04:54:42,780 Installing collected packages: wheel 2024-02-13T04:54:43,002 Creating /tmp/pip-build-env-73zbl7yc/normal/local/bin 2024-02-13T04:54:43,004 changing mode of /tmp/pip-build-env-73zbl7yc/normal/local/bin/wheel to 755 2024-02-13T04:54:43,016 Successfully installed wheel-0.42.0 2024-02-13T04:54:43,291 [notice] A new release of pip is available: 23.3.1 -> 24.0 2024-02-13T04:54:43,291 [notice] To update, run: python3 -m pip install --upgrade pip 2024-02-13T04:54:43,525 Installing backend dependencies: finished with status 'done' 2024-02-13T04:54:43,526 Created temporary directory: /tmp/pip-modern-metadata-9f7ysq62 2024-02-13T04:54:43,529 Preparing metadata (pyproject.toml): started 2024-02-13T04:54:43,530 Running command Preparing metadata (pyproject.toml) 2024-02-13T04:54:44,017 No `packages` or `py_modules` configuration, performing automatic discovery. 2024-02-13T04:54:44,018 `src-layout` detected -- analysing ./src 2024-02-13T04:54:44,024 discovered packages -- ['hpotk', 'hpotk.model', 'hpotk.annotations', 'hpotk.validate', 'hpotk.graph', 'hpotk.algorithm', 'hpotk.ontology', 'hpotk.constants', 'hpotk.util', 'hpotk.annotations.load', 'hpotk.annotations.load.hpoa', 'hpotk.graph.csr', 'hpotk.algorithm.similarity', 'hpotk.ontology.load', 'hpotk.ontology.load.obographs', 'hpotk.constants.hpo', 'hpotk.util.sort'] 2024-02-13T04:54:44,025 discovered py_modules -- [] 2024-02-13T04:54:44,321 running dist_info 2024-02-13T04:54:44,326 creating /tmp/pip-modern-metadata-9f7ysq62/hpo_toolkit.egg-info 2024-02-13T04:54:44,329 writing /tmp/pip-modern-metadata-9f7ysq62/hpo_toolkit.egg-info/PKG-INFO 2024-02-13T04:54:44,337 writing dependency_links to /tmp/pip-modern-metadata-9f7ysq62/hpo_toolkit.egg-info/dependency_links.txt 2024-02-13T04:54:44,341 writing requirements to /tmp/pip-modern-metadata-9f7ysq62/hpo_toolkit.egg-info/requires.txt 2024-02-13T04:54:44,342 writing top-level names to /tmp/pip-modern-metadata-9f7ysq62/hpo_toolkit.egg-info/top_level.txt 2024-02-13T04:54:44,344 writing manifest file '/tmp/pip-modern-metadata-9f7ysq62/hpo_toolkit.egg-info/SOURCES.txt' 2024-02-13T04:54:44,377 reading manifest file '/tmp/pip-modern-metadata-9f7ysq62/hpo_toolkit.egg-info/SOURCES.txt' 2024-02-13T04:54:44,379 adding license file 'LICENSE' 2024-02-13T04:54:44,383 writing manifest file '/tmp/pip-modern-metadata-9f7ysq62/hpo_toolkit.egg-info/SOURCES.txt' 2024-02-13T04:54:44,384 creating '/tmp/pip-modern-metadata-9f7ysq62/hpo_toolkit-0.4.3.dist-info' 2024-02-13T04:54:44,537 Preparing metadata (pyproject.toml): finished with status 'done' 2024-02-13T04:54:44,548 Source in /tmp/pip-wheel-rp4womle/hpo-toolkit_9da9e0dbb7224739ae956d4642295f73 has version 0.4.3, which satisfies requirement hpo-toolkit==0.4.3 from https://files.pythonhosted.org/packages/8b/7a/50e9d93aef25d7467d30a9df6e4154c5bc0b712577486a7d613b554ab0d6/hpo-toolkit-0.4.3.tar.gz 2024-02-13T04:54:44,549 Removed hpo-toolkit==0.4.3 from https://files.pythonhosted.org/packages/8b/7a/50e9d93aef25d7467d30a9df6e4154c5bc0b712577486a7d613b554ab0d6/hpo-toolkit-0.4.3.tar.gz from build tracker '/tmp/pip-build-tracker-tbo_bsdo' 2024-02-13T04:54:44,567 Created temporary directory: /tmp/pip-unpack-6pcznvqg 2024-02-13T04:54:44,568 Created temporary directory: /tmp/pip-unpack-rm4m1hb2 2024-02-13T04:54:44,604 Building wheels for collected packages: hpo-toolkit 2024-02-13T04:54:44,608 Created temporary directory: /tmp/pip-wheel-_0cvw3gn 2024-02-13T04:54:44,608 Destination directory: /tmp/pip-wheel-_0cvw3gn 2024-02-13T04:54:44,611 Building wheel for hpo-toolkit (pyproject.toml): started 2024-02-13T04:54:44,614 Running command Building wheel for hpo-toolkit (pyproject.toml) 2024-02-13T04:54:45,076 No `packages` or `py_modules` configuration, performing automatic discovery. 2024-02-13T04:54:45,076 `src-layout` detected -- analysing ./src 2024-02-13T04:54:45,082 discovered packages -- ['hpotk', 'hpotk.model', 'hpotk.annotations', 'hpotk.validate', 'hpotk.graph', 'hpotk.algorithm', 'hpotk.ontology', 'hpotk.constants', 'hpotk.util', 'hpotk.annotations.load', 'hpotk.annotations.load.hpoa', 'hpotk.graph.csr', 'hpotk.algorithm.similarity', 'hpotk.ontology.load', 'hpotk.ontology.load.obographs', 'hpotk.constants.hpo', 'hpotk.util.sort'] 2024-02-13T04:54:45,083 discovered py_modules -- [] 2024-02-13T04:54:45,356 running bdist_wheel 2024-02-13T04:54:45,371 running build 2024-02-13T04:54:45,372 running build_py 2024-02-13T04:54:45,376 creating build 2024-02-13T04:54:45,377 creating build/lib 2024-02-13T04:54:45,377 creating build/lib/hpotk 2024-02-13T04:54:45,379 copying src/hpotk/__init__.py -> build/lib/hpotk 2024-02-13T04:54:45,381 creating build/lib/hpotk/model 2024-02-13T04:54:45,382 copying src/hpotk/model/_base.py -> build/lib/hpotk/model 2024-02-13T04:54:45,384 copying src/hpotk/model/_term.py -> build/lib/hpotk/model 2024-02-13T04:54:45,387 copying src/hpotk/model/_term_id.py -> build/lib/hpotk/model 2024-02-13T04:54:45,389 copying src/hpotk/model/__init__.py -> build/lib/hpotk/model 2024-02-13T04:54:45,391 copying src/hpotk/model/_test__term_id.py -> build/lib/hpotk/model 2024-02-13T04:54:45,393 creating build/lib/hpotk/annotations 2024-02-13T04:54:45,394 copying src/hpotk/annotations/_base.py -> build/lib/hpotk/annotations 2024-02-13T04:54:45,397 copying src/hpotk/annotations/_api.py -> build/lib/hpotk/annotations 2024-02-13T04:54:45,398 copying src/hpotk/annotations/_test__simple.py -> build/lib/hpotk/annotations 2024-02-13T04:54:45,400 copying src/hpotk/annotations/_simple.py -> build/lib/hpotk/annotations 2024-02-13T04:54:45,402 copying src/hpotk/annotations/__init__.py -> build/lib/hpotk/annotations 2024-02-13T04:54:45,403 copying src/hpotk/annotations/_test__base.py -> build/lib/hpotk/annotations 2024-02-13T04:54:45,406 creating build/lib/hpotk/validate 2024-02-13T04:54:45,407 copying src/hpotk/validate/_hpo.py -> build/lib/hpotk/validate 2024-02-13T04:54:45,409 copying src/hpotk/validate/__init__.py -> build/lib/hpotk/validate 2024-02-13T04:54:45,411 copying src/hpotk/validate/_util.py -> build/lib/hpotk/validate 2024-02-13T04:54:45,413 copying src/hpotk/validate/_model.py -> build/lib/hpotk/validate 2024-02-13T04:54:45,415 creating build/lib/hpotk/graph 2024-02-13T04:54:45,416 copying src/hpotk/graph/_test__csr_graph.py -> build/lib/hpotk/graph 2024-02-13T04:54:45,418 copying src/hpotk/graph/_test_data.py -> build/lib/hpotk/graph 2024-02-13T04:54:45,420 copying src/hpotk/graph/_csr_idx_graph.py -> build/lib/hpotk/graph 2024-02-13T04:54:45,421 copying src/hpotk/graph/_test__factory.py -> build/lib/hpotk/graph 2024-02-13T04:54:45,423 copying src/hpotk/graph/_csr_graph.py -> build/lib/hpotk/graph 2024-02-13T04:54:45,425 copying src/hpotk/graph/_api.py -> build/lib/hpotk/graph 2024-02-13T04:54:45,428 copying src/hpotk/graph/__init__.py -> build/lib/hpotk/graph 2024-02-13T04:54:45,431 copying src/hpotk/graph/_test_csr_idx_graph.py -> build/lib/hpotk/graph 2024-02-13T04:54:45,433 copying src/hpotk/graph/_factory.py -> build/lib/hpotk/graph 2024-02-13T04:54:45,436 copying src/hpotk/graph/_test__api.py -> build/lib/hpotk/graph 2024-02-13T04:54:45,439 creating build/lib/hpotk/algorithm 2024-02-13T04:54:45,439 copying src/hpotk/algorithm/__init__.py -> build/lib/hpotk/algorithm 2024-02-13T04:54:45,441 copying src/hpotk/algorithm/_traversal.py -> build/lib/hpotk/algorithm 2024-02-13T04:54:45,443 copying src/hpotk/algorithm/_augment.py -> build/lib/hpotk/algorithm 2024-02-13T04:54:45,446 creating build/lib/hpotk/ontology 2024-02-13T04:54:45,447 copying src/hpotk/ontology/_api.py -> build/lib/hpotk/ontology 2024-02-13T04:54:45,449 copying src/hpotk/ontology/__init__.py -> build/lib/hpotk/ontology 2024-02-13T04:54:45,450 copying src/hpotk/ontology/_default.py -> build/lib/hpotk/ontology 2024-02-13T04:54:45,453 creating build/lib/hpotk/constants 2024-02-13T04:54:45,454 copying src/hpotk/constants/__init__.py -> build/lib/hpotk/constants 2024-02-13T04:54:45,456 creating build/lib/hpotk/util 2024-02-13T04:54:45,457 copying src/hpotk/util/_validate.py -> build/lib/hpotk/util 2024-02-13T04:54:45,459 copying src/hpotk/util/_io.py -> build/lib/hpotk/util 2024-02-13T04:54:45,461 copying src/hpotk/util/__init__.py -> build/lib/hpotk/util 2024-02-13T04:54:45,463 copying src/hpotk/util/_log.py -> build/lib/hpotk/util 2024-02-13T04:54:45,465 creating build/lib/hpotk/annotations/load 2024-02-13T04:54:45,465 copying src/hpotk/annotations/load/_api.py -> build/lib/hpotk/annotations/load 2024-02-13T04:54:45,467 copying src/hpotk/annotations/load/__init__.py -> build/lib/hpotk/annotations/load 2024-02-13T04:54:45,469 creating build/lib/hpotk/annotations/load/hpoa 2024-02-13T04:54:45,470 copying src/hpotk/annotations/load/hpoa/_impl.py -> build/lib/hpotk/annotations/load/hpoa 2024-02-13T04:54:45,473 copying src/hpotk/annotations/load/hpoa/__init__.py -> build/lib/hpotk/annotations/load/hpoa 2024-02-13T04:54:45,474 copying src/hpotk/annotations/load/hpoa/_test__impl.py -> build/lib/hpotk/annotations/load/hpoa 2024-02-13T04:54:45,477 creating build/lib/hpotk/graph/csr 2024-02-13T04:54:45,477 copying src/hpotk/graph/csr/_csr.py -> build/lib/hpotk/graph/csr 2024-02-13T04:54:45,480 copying src/hpotk/graph/csr/_test__csr.py -> build/lib/hpotk/graph/csr 2024-02-13T04:54:45,482 copying src/hpotk/graph/csr/__init__.py -> build/lib/hpotk/graph/csr 2024-02-13T04:54:45,484 creating build/lib/hpotk/algorithm/similarity 2024-02-13T04:54:45,485 copying src/hpotk/algorithm/similarity/_ic.py -> build/lib/hpotk/algorithm/similarity 2024-02-13T04:54:45,487 copying src/hpotk/algorithm/similarity/_resnik.py -> build/lib/hpotk/algorithm/similarity 2024-02-13T04:54:45,489 copying src/hpotk/algorithm/similarity/__init__.py -> build/lib/hpotk/algorithm/similarity 2024-02-13T04:54:45,491 copying src/hpotk/algorithm/similarity/_model.py -> build/lib/hpotk/algorithm/similarity 2024-02-13T04:54:45,493 creating build/lib/hpotk/ontology/load 2024-02-13T04:54:45,494 copying src/hpotk/ontology/load/__init__.py -> build/lib/hpotk/ontology/load 2024-02-13T04:54:45,496 creating build/lib/hpotk/ontology/load/obographs 2024-02-13T04:54:45,497 copying src/hpotk/ontology/load/obographs/_test_load.py -> build/lib/hpotk/ontology/load/obographs 2024-02-13T04:54:45,499 copying src/hpotk/ontology/load/obographs/_load.py -> build/lib/hpotk/ontology/load/obographs 2024-02-13T04:54:45,501 copying src/hpotk/ontology/load/obographs/__init__.py -> build/lib/hpotk/ontology/load/obographs 2024-02-13T04:54:45,503 copying src/hpotk/ontology/load/obographs/_factory.py -> build/lib/hpotk/ontology/load/obographs 2024-02-13T04:54:45,505 copying src/hpotk/ontology/load/obographs/_model.py -> build/lib/hpotk/ontology/load/obographs 2024-02-13T04:54:45,507 creating build/lib/hpotk/constants/hpo 2024-02-13T04:54:45,508 copying src/hpotk/constants/hpo/frequency.py -> build/lib/hpotk/constants/hpo 2024-02-13T04:54:45,510 copying src/hpotk/constants/hpo/inheritance.py -> build/lib/hpotk/constants/hpo 2024-02-13T04:54:45,511 copying src/hpotk/constants/hpo/organ_system.py -> build/lib/hpotk/constants/hpo 2024-02-13T04:54:45,513 copying src/hpotk/constants/hpo/onset.py -> build/lib/hpotk/constants/hpo 2024-02-13T04:54:45,515 copying src/hpotk/constants/hpo/__init__.py -> build/lib/hpotk/constants/hpo 2024-02-13T04:54:45,516 copying src/hpotk/constants/hpo/base.py -> build/lib/hpotk/constants/hpo 2024-02-13T04:54:45,518 copying src/hpotk/constants/hpo/severity.py -> build/lib/hpotk/constants/hpo 2024-02-13T04:54:45,520 creating build/lib/hpotk/util/sort 2024-02-13T04:54:45,521 copying src/hpotk/util/sort/_hierarchical.py -> build/lib/hpotk/util/sort 2024-02-13T04:54:45,523 copying src/hpotk/util/sort/_api.py -> build/lib/hpotk/util/sort 2024-02-13T04:54:45,524 copying src/hpotk/util/sort/__init__.py -> build/lib/hpotk/util/sort 2024-02-13T04:54:45,526 copying src/hpotk/util/sort/_test__hierarchical.py -> build/lib/hpotk/util/sort 2024-02-13T04:54:45,528 running egg_info 2024-02-13T04:54:45,531 writing src/hpo_toolkit.egg-info/PKG-INFO 2024-02-13T04:54:45,538 writing dependency_links to src/hpo_toolkit.egg-info/dependency_links.txt 2024-02-13T04:54:45,541 writing requirements to src/hpo_toolkit.egg-info/requires.txt 2024-02-13T04:54:45,542 writing top-level names to src/hpo_toolkit.egg-info/top_level.txt 2024-02-13T04:54:45,563 reading manifest file 'src/hpo_toolkit.egg-info/SOURCES.txt' 2024-02-13T04:54:45,572 adding license file 'LICENSE' 2024-02-13T04:54:45,576 writing manifest file 'src/hpo_toolkit.egg-info/SOURCES.txt' 2024-02-13T04:54:45,597 installing to build/bdist.linux-armv7l/wheel 2024-02-13T04:54:45,598 running install 2024-02-13T04:54:45,621 running install_lib 2024-02-13T04:54:45,625 creating build/bdist.linux-armv7l 2024-02-13T04:54:45,626 creating build/bdist.linux-armv7l/wheel 2024-02-13T04:54:45,628 creating build/bdist.linux-armv7l/wheel/hpotk 2024-02-13T04:54:45,629 creating build/bdist.linux-armv7l/wheel/hpotk/model 2024-02-13T04:54:45,630 copying build/lib/hpotk/model/_base.py -> build/bdist.linux-armv7l/wheel/hpotk/model 2024-02-13T04:54:45,633 copying build/lib/hpotk/model/_term.py -> build/bdist.linux-armv7l/wheel/hpotk/model 2024-02-13T04:54:45,635 copying build/lib/hpotk/model/_term_id.py -> build/bdist.linux-armv7l/wheel/hpotk/model 2024-02-13T04:54:45,637 copying build/lib/hpotk/model/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/model 2024-02-13T04:54:45,639 copying build/lib/hpotk/model/_test__term_id.py -> build/bdist.linux-armv7l/wheel/hpotk/model 2024-02-13T04:54:45,641 creating build/bdist.linux-armv7l/wheel/hpotk/annotations 2024-02-13T04:54:45,642 copying build/lib/hpotk/annotations/_base.py -> build/bdist.linux-armv7l/wheel/hpotk/annotations 2024-02-13T04:54:45,645 creating build/bdist.linux-armv7l/wheel/hpotk/annotations/load 2024-02-13T04:54:45,646 copying build/lib/hpotk/annotations/load/_api.py -> build/bdist.linux-armv7l/wheel/hpotk/annotations/load 2024-02-13T04:54:45,648 copying build/lib/hpotk/annotations/load/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/annotations/load 2024-02-13T04:54:45,651 creating build/bdist.linux-armv7l/wheel/hpotk/annotations/load/hpoa 2024-02-13T04:54:45,651 copying build/lib/hpotk/annotations/load/hpoa/_impl.py -> build/bdist.linux-armv7l/wheel/hpotk/annotations/load/hpoa 2024-02-13T04:54:45,654 copying build/lib/hpotk/annotations/load/hpoa/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/annotations/load/hpoa 2024-02-13T04:54:45,656 copying build/lib/hpotk/annotations/load/hpoa/_test__impl.py -> build/bdist.linux-armv7l/wheel/hpotk/annotations/load/hpoa 2024-02-13T04:54:45,657 copying build/lib/hpotk/annotations/_api.py -> build/bdist.linux-armv7l/wheel/hpotk/annotations 2024-02-13T04:54:45,659 copying build/lib/hpotk/annotations/_test__simple.py -> build/bdist.linux-armv7l/wheel/hpotk/annotations 2024-02-13T04:54:45,661 copying build/lib/hpotk/annotations/_simple.py -> build/bdist.linux-armv7l/wheel/hpotk/annotations 2024-02-13T04:54:45,663 copying build/lib/hpotk/annotations/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/annotations 2024-02-13T04:54:45,664 copying build/lib/hpotk/annotations/_test__base.py -> build/bdist.linux-armv7l/wheel/hpotk/annotations 2024-02-13T04:54:45,666 creating build/bdist.linux-armv7l/wheel/hpotk/validate 2024-02-13T04:54:45,667 copying build/lib/hpotk/validate/_hpo.py -> build/bdist.linux-armv7l/wheel/hpotk/validate 2024-02-13T04:54:45,670 copying build/lib/hpotk/validate/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/validate 2024-02-13T04:54:45,671 copying build/lib/hpotk/validate/_util.py -> build/bdist.linux-armv7l/wheel/hpotk/validate 2024-02-13T04:54:45,673 copying build/lib/hpotk/validate/_model.py -> build/bdist.linux-armv7l/wheel/hpotk/validate 2024-02-13T04:54:45,676 creating build/bdist.linux-armv7l/wheel/hpotk/graph 2024-02-13T04:54:45,677 creating build/bdist.linux-armv7l/wheel/hpotk/graph/csr 2024-02-13T04:54:45,678 copying build/lib/hpotk/graph/csr/_csr.py -> build/bdist.linux-armv7l/wheel/hpotk/graph/csr 2024-02-13T04:54:45,681 copying build/lib/hpotk/graph/csr/_test__csr.py -> build/bdist.linux-armv7l/wheel/hpotk/graph/csr 2024-02-13T04:54:45,683 copying build/lib/hpotk/graph/csr/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/graph/csr 2024-02-13T04:54:45,684 copying build/lib/hpotk/graph/_test__csr_graph.py -> build/bdist.linux-armv7l/wheel/hpotk/graph 2024-02-13T04:54:45,686 copying build/lib/hpotk/graph/_test_data.py -> build/bdist.linux-armv7l/wheel/hpotk/graph 2024-02-13T04:54:45,688 copying build/lib/hpotk/graph/_csr_idx_graph.py -> build/bdist.linux-armv7l/wheel/hpotk/graph 2024-02-13T04:54:45,690 copying build/lib/hpotk/graph/_test__factory.py -> build/bdist.linux-armv7l/wheel/hpotk/graph 2024-02-13T04:54:45,693 copying build/lib/hpotk/graph/_csr_graph.py -> build/bdist.linux-armv7l/wheel/hpotk/graph 2024-02-13T04:54:45,695 copying build/lib/hpotk/graph/_api.py -> build/bdist.linux-armv7l/wheel/hpotk/graph 2024-02-13T04:54:45,698 copying build/lib/hpotk/graph/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/graph 2024-02-13T04:54:45,700 copying build/lib/hpotk/graph/_test_csr_idx_graph.py -> build/bdist.linux-armv7l/wheel/hpotk/graph 2024-02-13T04:54:45,702 copying build/lib/hpotk/graph/_factory.py -> build/bdist.linux-armv7l/wheel/hpotk/graph 2024-02-13T04:54:45,704 copying build/lib/hpotk/graph/_test__api.py -> build/bdist.linux-armv7l/wheel/hpotk/graph 2024-02-13T04:54:45,707 creating build/bdist.linux-armv7l/wheel/hpotk/algorithm 2024-02-13T04:54:45,708 creating build/bdist.linux-armv7l/wheel/hpotk/algorithm/similarity 2024-02-13T04:54:45,709 copying build/lib/hpotk/algorithm/similarity/_ic.py -> build/bdist.linux-armv7l/wheel/hpotk/algorithm/similarity 2024-02-13T04:54:45,711 copying build/lib/hpotk/algorithm/similarity/_resnik.py -> build/bdist.linux-armv7l/wheel/hpotk/algorithm/similarity 2024-02-13T04:54:45,713 copying build/lib/hpotk/algorithm/similarity/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/algorithm/similarity 2024-02-13T04:54:45,715 copying build/lib/hpotk/algorithm/similarity/_model.py -> build/bdist.linux-armv7l/wheel/hpotk/algorithm/similarity 2024-02-13T04:54:45,717 copying build/lib/hpotk/algorithm/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/algorithm 2024-02-13T04:54:45,719 copying build/lib/hpotk/algorithm/_traversal.py -> build/bdist.linux-armv7l/wheel/hpotk/algorithm 2024-02-13T04:54:45,721 copying build/lib/hpotk/algorithm/_augment.py -> build/bdist.linux-armv7l/wheel/hpotk/algorithm 2024-02-13T04:54:45,724 creating build/bdist.linux-armv7l/wheel/hpotk/ontology 2024-02-13T04:54:45,725 creating build/bdist.linux-armv7l/wheel/hpotk/ontology/load 2024-02-13T04:54:45,726 copying build/lib/hpotk/ontology/load/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/ontology/load 2024-02-13T04:54:45,728 creating build/bdist.linux-armv7l/wheel/hpotk/ontology/load/obographs 2024-02-13T04:54:45,729 copying build/lib/hpotk/ontology/load/obographs/_test_load.py -> build/bdist.linux-armv7l/wheel/hpotk/ontology/load/obographs 2024-02-13T04:54:45,731 copying build/lib/hpotk/ontology/load/obographs/_load.py -> build/bdist.linux-armv7l/wheel/hpotk/ontology/load/obographs 2024-02-13T04:54:45,733 copying build/lib/hpotk/ontology/load/obographs/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/ontology/load/obographs 2024-02-13T04:54:45,735 copying build/lib/hpotk/ontology/load/obographs/_factory.py -> build/bdist.linux-armv7l/wheel/hpotk/ontology/load/obographs 2024-02-13T04:54:45,737 copying build/lib/hpotk/ontology/load/obographs/_model.py -> build/bdist.linux-armv7l/wheel/hpotk/ontology/load/obographs 2024-02-13T04:54:45,739 copying build/lib/hpotk/ontology/_api.py -> build/bdist.linux-armv7l/wheel/hpotk/ontology 2024-02-13T04:54:45,742 copying build/lib/hpotk/ontology/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/ontology 2024-02-13T04:54:45,743 copying build/lib/hpotk/ontology/_default.py -> build/bdist.linux-armv7l/wheel/hpotk/ontology 2024-02-13T04:54:45,745 copying build/lib/hpotk/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk 2024-02-13T04:54:45,747 creating build/bdist.linux-armv7l/wheel/hpotk/constants 2024-02-13T04:54:45,749 creating build/bdist.linux-armv7l/wheel/hpotk/constants/hpo 2024-02-13T04:54:45,750 copying build/lib/hpotk/constants/hpo/frequency.py -> build/bdist.linux-armv7l/wheel/hpotk/constants/hpo 2024-02-13T04:54:45,752 copying build/lib/hpotk/constants/hpo/inheritance.py -> build/bdist.linux-armv7l/wheel/hpotk/constants/hpo 2024-02-13T04:54:45,754 copying build/lib/hpotk/constants/hpo/organ_system.py -> build/bdist.linux-armv7l/wheel/hpotk/constants/hpo 2024-02-13T04:54:45,756 copying build/lib/hpotk/constants/hpo/onset.py -> build/bdist.linux-armv7l/wheel/hpotk/constants/hpo 2024-02-13T04:54:45,757 copying build/lib/hpotk/constants/hpo/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/constants/hpo 2024-02-13T04:54:45,759 copying build/lib/hpotk/constants/hpo/base.py -> build/bdist.linux-armv7l/wheel/hpotk/constants/hpo 2024-02-13T04:54:45,761 copying build/lib/hpotk/constants/hpo/severity.py -> build/bdist.linux-armv7l/wheel/hpotk/constants/hpo 2024-02-13T04:54:45,763 copying build/lib/hpotk/constants/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/constants 2024-02-13T04:54:45,765 creating build/bdist.linux-armv7l/wheel/hpotk/util 2024-02-13T04:54:45,766 copying build/lib/hpotk/util/_validate.py -> build/bdist.linux-armv7l/wheel/hpotk/util 2024-02-13T04:54:45,768 creating build/bdist.linux-armv7l/wheel/hpotk/util/sort 2024-02-13T04:54:45,769 copying build/lib/hpotk/util/sort/_hierarchical.py -> build/bdist.linux-armv7l/wheel/hpotk/util/sort 2024-02-13T04:54:45,771 copying build/lib/hpotk/util/sort/_api.py -> build/bdist.linux-armv7l/wheel/hpotk/util/sort 2024-02-13T04:54:45,773 copying build/lib/hpotk/util/sort/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/util/sort 2024-02-13T04:54:45,775 copying build/lib/hpotk/util/sort/_test__hierarchical.py -> build/bdist.linux-armv7l/wheel/hpotk/util/sort 2024-02-13T04:54:45,777 copying build/lib/hpotk/util/_io.py -> build/bdist.linux-armv7l/wheel/hpotk/util 2024-02-13T04:54:45,779 copying build/lib/hpotk/util/__init__.py -> build/bdist.linux-armv7l/wheel/hpotk/util 2024-02-13T04:54:45,781 copying build/lib/hpotk/util/_log.py -> build/bdist.linux-armv7l/wheel/hpotk/util 2024-02-13T04:54:45,782 running install_egg_info 2024-02-13T04:54:45,786 Copying src/hpo_toolkit.egg-info to build/bdist.linux-armv7l/wheel/hpo_toolkit-0.4.3-py3.11.egg-info 2024-02-13T04:54:45,798 running install_scripts 2024-02-13T04:54:45,817 creating build/bdist.linux-armv7l/wheel/hpo_toolkit-0.4.3.dist-info/WHEEL 2024-02-13T04:54:45,820 creating '/tmp/pip-wheel-_0cvw3gn/.tmp-sn36h9iz/hpo_toolkit-0.4.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-02-13T04:54:45,823 adding 'hpotk/__init__.py' 2024-02-13T04:54:45,824 adding 'hpotk/algorithm/__init__.py' 2024-02-13T04:54:45,826 adding 'hpotk/algorithm/_augment.py' 2024-02-13T04:54:45,827 adding 'hpotk/algorithm/_traversal.py' 2024-02-13T04:54:45,829 adding 'hpotk/algorithm/similarity/__init__.py' 2024-02-13T04:54:45,830 adding 'hpotk/algorithm/similarity/_ic.py' 2024-02-13T04:54:45,832 adding 'hpotk/algorithm/similarity/_model.py' 2024-02-13T04:54:45,833 adding 'hpotk/algorithm/similarity/_resnik.py' 2024-02-13T04:54:45,835 adding 'hpotk/annotations/__init__.py' 2024-02-13T04:54:45,836 adding 'hpotk/annotations/_api.py' 2024-02-13T04:54:45,838 adding 'hpotk/annotations/_base.py' 2024-02-13T04:54:45,839 adding 'hpotk/annotations/_simple.py' 2024-02-13T04:54:45,841 adding 'hpotk/annotations/_test__base.py' 2024-02-13T04:54:45,842 adding 'hpotk/annotations/_test__simple.py' 2024-02-13T04:54:45,844 adding 'hpotk/annotations/load/__init__.py' 2024-02-13T04:54:45,845 adding 'hpotk/annotations/load/_api.py' 2024-02-13T04:54:45,846 adding 'hpotk/annotations/load/hpoa/__init__.py' 2024-02-13T04:54:45,848 adding 'hpotk/annotations/load/hpoa/_impl.py' 2024-02-13T04:54:45,849 adding 'hpotk/annotations/load/hpoa/_test__impl.py' 2024-02-13T04:54:45,851 adding 'hpotk/constants/__init__.py' 2024-02-13T04:54:45,853 adding 'hpotk/constants/hpo/__init__.py' 2024-02-13T04:54:45,854 adding 'hpotk/constants/hpo/base.py' 2024-02-13T04:54:45,855 adding 'hpotk/constants/hpo/frequency.py' 2024-02-13T04:54:45,856 adding 'hpotk/constants/hpo/inheritance.py' 2024-02-13T04:54:45,858 adding 'hpotk/constants/hpo/onset.py' 2024-02-13T04:54:45,859 adding 'hpotk/constants/hpo/organ_system.py' 2024-02-13T04:54:45,860 adding 'hpotk/constants/hpo/severity.py' 2024-02-13T04:54:45,862 adding 'hpotk/graph/__init__.py' 2024-02-13T04:54:45,864 adding 'hpotk/graph/_api.py' 2024-02-13T04:54:45,866 adding 'hpotk/graph/_csr_graph.py' 2024-02-13T04:54:45,867 adding 'hpotk/graph/_csr_idx_graph.py' 2024-02-13T04:54:45,869 adding 'hpotk/graph/_factory.py' 2024-02-13T04:54:45,871 adding 'hpotk/graph/_test__api.py' 2024-02-13T04:54:45,873 adding 'hpotk/graph/_test__csr_graph.py' 2024-02-13T04:54:45,875 adding 'hpotk/graph/_test__factory.py' 2024-02-13T04:54:45,876 adding 'hpotk/graph/_test_csr_idx_graph.py' 2024-02-13T04:54:45,878 adding 'hpotk/graph/_test_data.py' 2024-02-13T04:54:45,879 adding 'hpotk/graph/csr/__init__.py' 2024-02-13T04:54:45,881 adding 'hpotk/graph/csr/_csr.py' 2024-02-13T04:54:45,883 adding 'hpotk/graph/csr/_test__csr.py' 2024-02-13T04:54:45,884 adding 'hpotk/model/__init__.py' 2024-02-13T04:54:45,886 adding 'hpotk/model/_base.py' 2024-02-13T04:54:45,888 adding 'hpotk/model/_term.py' 2024-02-13T04:54:45,889 adding 'hpotk/model/_term_id.py' 2024-02-13T04:54:45,891 adding 'hpotk/model/_test__term_id.py' 2024-02-13T04:54:45,892 adding 'hpotk/ontology/__init__.py' 2024-02-13T04:54:45,894 adding 'hpotk/ontology/_api.py' 2024-02-13T04:54:45,895 adding 'hpotk/ontology/_default.py' 2024-02-13T04:54:45,897 adding 'hpotk/ontology/load/__init__.py' 2024-02-13T04:54:45,899 adding 'hpotk/ontology/load/obographs/__init__.py' 2024-02-13T04:54:45,900 adding 'hpotk/ontology/load/obographs/_factory.py' 2024-02-13T04:54:45,902 adding 'hpotk/ontology/load/obographs/_load.py' 2024-02-13T04:54:45,903 adding 'hpotk/ontology/load/obographs/_model.py' 2024-02-13T04:54:45,904 adding 'hpotk/ontology/load/obographs/_test_load.py' 2024-02-13T04:54:45,906 adding 'hpotk/util/__init__.py' 2024-02-13T04:54:45,907 adding 'hpotk/util/_io.py' 2024-02-13T04:54:45,908 adding 'hpotk/util/_log.py' 2024-02-13T04:54:45,910 adding 'hpotk/util/_validate.py' 2024-02-13T04:54:45,911 adding 'hpotk/util/sort/__init__.py' 2024-02-13T04:54:45,912 adding 'hpotk/util/sort/_api.py' 2024-02-13T04:54:45,914 adding 'hpotk/util/sort/_hierarchical.py' 2024-02-13T04:54:45,915 adding 'hpotk/util/sort/_test__hierarchical.py' 2024-02-13T04:54:45,917 adding 'hpotk/validate/__init__.py' 2024-02-13T04:54:45,918 adding 'hpotk/validate/_hpo.py' 2024-02-13T04:54:45,920 adding 'hpotk/validate/_model.py' 2024-02-13T04:54:45,921 adding 'hpotk/validate/_util.py' 2024-02-13T04:54:45,927 adding 'hpo_toolkit-0.4.3.dist-info/LICENSE' 2024-02-13T04:54:45,934 adding 'hpo_toolkit-0.4.3.dist-info/METADATA' 2024-02-13T04:54:45,935 adding 'hpo_toolkit-0.4.3.dist-info/WHEEL' 2024-02-13T04:54:45,936 adding 'hpo_toolkit-0.4.3.dist-info/top_level.txt' 2024-02-13T04:54:45,938 adding 'hpo_toolkit-0.4.3.dist-info/RECORD' 2024-02-13T04:54:45,940 removing build/bdist.linux-armv7l/wheel 2024-02-13T04:54:46,080 Building wheel for hpo-toolkit (pyproject.toml): finished with status 'done' 2024-02-13T04:54:46,086 Created wheel for hpo-toolkit: filename=hpo_toolkit-0.4.3-py3-none-any.whl size=101816 sha256=a672b830c5e849c4ac328ac19eee518eebb55d958c48055d3bb62f8c1211894e 2024-02-13T04:54:46,088 Stored in directory: /tmp/pip-ephem-wheel-cache-zfpiimq_/wheels/8a/85/1b/5be92b6ec09d411f27508be4c4a86f72453b1536495f14b725 2024-02-13T04:54:46,121 Successfully built hpo-toolkit 2024-02-13T04:54:46,130 Removed build tracker: '/tmp/pip-build-tracker-tbo_bsdo'