2024-02-14T08:49:56,906 Created temporary directory: /tmp/pip-build-tracker-6kujaewv 2024-02-14T08:49:56,908 Initialized build tracking at /tmp/pip-build-tracker-6kujaewv 2024-02-14T08:49:56,908 Created build tracker: /tmp/pip-build-tracker-6kujaewv 2024-02-14T08:49:56,908 Entered build tracker: /tmp/pip-build-tracker-6kujaewv 2024-02-14T08:49:56,909 Created temporary directory: /tmp/pip-wheel-qzcsjbxv 2024-02-14T08:49:56,912 Created temporary directory: /tmp/pip-ephem-wheel-cache-ebc6188y 2024-02-14T08:49:56,935 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-02-14T08:49:56,938 2 location(s) to search for versions of phetk: 2024-02-14T08:49:56,938 * https://pypi.org/simple/phetk/ 2024-02-14T08:49:56,938 * https://www.piwheels.org/simple/phetk/ 2024-02-14T08:49:56,939 Fetching project page and analyzing links: https://pypi.org/simple/phetk/ 2024-02-14T08:49:56,940 Getting page https://pypi.org/simple/phetk/ 2024-02-14T08:49:56,941 Found index url https://pypi.org/simple/ 2024-02-14T08:49:57,083 Fetched page https://pypi.org/simple/phetk/ as application/vnd.pypi.simple.v1+json 2024-02-14T08:49:57,086 Skipping link: No binaries permitted for phetk: https://files.pythonhosted.org/packages/ab/85/d4de239d09280be65ca0a64eedb48d66031464b5b9f2aa9b6c565fffbb20/PheTK-0.1.27-py3-none-any.whl (from https://pypi.org/simple/phetk/) (requires-python:>=3.7) 2024-02-14T08:49:57,087 Found link https://files.pythonhosted.org/packages/b6/c8/7ca1266859b865c95225676124780716dca1918c9fe6163a6b01056b2c66/PheTK-0.1.27.tar.gz (from https://pypi.org/simple/phetk/) (requires-python:>=3.7), version: 0.1.27 2024-02-14T08:49:57,088 Skipping link: No binaries permitted for phetk: https://files.pythonhosted.org/packages/93/87/b73baae3773a7e000e33315fd846a37096214e5f15c0a0d188e9d2548b84/PheTK-0.1.28-py3-none-any.whl (from https://pypi.org/simple/phetk/) (requires-python:>=3.7) 2024-02-14T08:49:57,089 Found link https://files.pythonhosted.org/packages/05/6f/0515874622873bbffa8f80bb6f97f60372560dbcd1bc566a988d09a5852f/PheTK-0.1.28.tar.gz (from https://pypi.org/simple/phetk/) (requires-python:>=3.7), version: 0.1.28 2024-02-14T08:49:57,090 Skipping link: No binaries permitted for phetk: https://files.pythonhosted.org/packages/5c/b3/abfd61a623c7aade54f10e3491e3fe42834be242e637991227b718768340/PheTK-0.1.29-py3-none-any.whl (from https://pypi.org/simple/phetk/) (requires-python:>=3.7) 2024-02-14T08:49:57,091 Found link https://files.pythonhosted.org/packages/6a/03/9f88d101237020e508977ed564fd07df35663da5329431574281c00a6d7e/PheTK-0.1.29.tar.gz (from https://pypi.org/simple/phetk/) (requires-python:>=3.7), version: 0.1.29 2024-02-14T08:49:57,091 Skipping link: No binaries permitted for phetk: https://files.pythonhosted.org/packages/37/13/1d5741ec8ec003fd10840278fab06b408ad84e604ae020cfea636a757272/PheTK-0.1.30-py3-none-any.whl (from https://pypi.org/simple/phetk/) (requires-python:>=3.7) 2024-02-14T08:49:57,092 Found link https://files.pythonhosted.org/packages/93/2d/bf39b665f399f58b94ee69f6078f6ab20cfc8f20b051e9e54e2244756a28/PheTK-0.1.30.tar.gz (from https://pypi.org/simple/phetk/) (requires-python:>=3.7), version: 0.1.30 2024-02-14T08:49:57,093 Skipping link: No binaries permitted for phetk: https://files.pythonhosted.org/packages/42/14/ed4bb819cf09a48f7a214f59e09907fe653b6b1736671dcc9db6c30ad05d/PheTK-0.1.31-py3-none-any.whl (from https://pypi.org/simple/phetk/) (requires-python:>=3.7) 2024-02-14T08:49:57,094 Found link https://files.pythonhosted.org/packages/c6/ad/22f597423a49ed24adf94e7a94d8b753f0e22aa4a89f7eb4309f1e201f55/PheTK-0.1.31.tar.gz (from https://pypi.org/simple/phetk/) (requires-python:>=3.7), version: 0.1.31 2024-02-14T08:49:57,094 Skipping link: No binaries permitted for phetk: https://files.pythonhosted.org/packages/52/7d/faf3f1f7495c07ffda72089b15d0caab832ce3cc7d7e760bcfb601847cf4/PheTK-0.1.32-py3-none-any.whl (from https://pypi.org/simple/phetk/) (requires-python:>=3.7) 2024-02-14T08:49:57,095 Found link https://files.pythonhosted.org/packages/1f/b5/ed528960cd6653362c05489911b5c0463db2993cc3893cda4d102b966adf/PheTK-0.1.32.tar.gz (from https://pypi.org/simple/phetk/) (requires-python:>=3.7), version: 0.1.32 2024-02-14T08:49:57,096 Fetching project page and analyzing links: https://www.piwheels.org/simple/phetk/ 2024-02-14T08:49:57,097 Getting page https://www.piwheels.org/simple/phetk/ 2024-02-14T08:49:57,098 Found index url https://www.piwheels.org/simple/ 2024-02-14T08:49:57,263 Fetched page https://www.piwheels.org/simple/phetk/ as text/html 2024-02-14T08:49:57,266 Skipping link: No binaries permitted for phetk: https://www.piwheels.org/simple/phetk/PheTK-0.1.31-py3-none-any.whl#sha256=88c1fbf676ff80d74532bc265994674a3c1ca034aceb8685fa69626cba8a7e93 (from https://www.piwheels.org/simple/phetk/) (requires-python:>=3.7) 2024-02-14T08:49:57,267 Skipping link: No binaries permitted for phetk: https://www.piwheels.org/simple/phetk/PheTK-0.1.30-py3-none-any.whl#sha256=8bd889446f0e99f1610fddd4d3fdad088ff415a864123b27eefe7985f9a6f8fb (from https://www.piwheels.org/simple/phetk/) (requires-python:>=3.7) 2024-02-14T08:49:57,267 Skipping link: No binaries permitted for phetk: https://www.piwheels.org/simple/phetk/PheTK-0.1.29-py3-none-any.whl#sha256=01aeb58b6e2da368220f87030b17cf07a21975f0037ac87be278ead8a651ba47 (from https://www.piwheels.org/simple/phetk/) (requires-python:>=3.7) 2024-02-14T08:49:57,268 Skipping link: No binaries permitted for phetk: https://www.piwheels.org/simple/phetk/PheTK-0.1.28-py3-none-any.whl#sha256=9226c66ad1e294b3d00fca24d16a5f435e19ae66dfb4d49ace90c9ae53564301 (from https://www.piwheels.org/simple/phetk/) (requires-python:>=3.7) 2024-02-14T08:49:57,268 Skipping link: No binaries permitted for phetk: https://www.piwheels.org/simple/phetk/PheTK-0.1.27-py3-none-any.whl#sha256=eaa31c02c286da1f33e9ff47dd574577822cc06d3b413cdfbe1e734f121ac0e0 (from https://www.piwheels.org/simple/phetk/) (requires-python:>=3.7) 2024-02-14T08:49:57,268 Skipping link: not a file: https://www.piwheels.org/simple/phetk/ 2024-02-14T08:49:57,269 Skipping link: not a file: https://pypi.org/simple/phetk/ 2024-02-14T08:49:57,288 Given no hashes to check 1 links for project 'phetk': discarding no candidates 2024-02-14T08:49:57,307 Collecting phetk==0.1.32 2024-02-14T08:49:57,309 Created temporary directory: /tmp/pip-unpack-x9rm2bur 2024-02-14T08:49:57,530 Downloading PheTK-0.1.32.tar.gz (1.3 MB) 2024-02-14T08:49:58,730 Added phetk==0.1.32 from https://files.pythonhosted.org/packages/1f/b5/ed528960cd6653362c05489911b5c0463db2993cc3893cda4d102b966adf/PheTK-0.1.32.tar.gz to build tracker '/tmp/pip-build-tracker-6kujaewv' 2024-02-14T08:49:58,733 Running setup.py (path:/tmp/pip-wheel-qzcsjbxv/phetk_194d8dcae01c4d18a017e967acb033a5/setup.py) egg_info for package phetk 2024-02-14T08:49:58,735 Created temporary directory: /tmp/pip-pip-egg-info-rvqcm1m2 2024-02-14T08:49:58,736 Preparing metadata (setup.py): started 2024-02-14T08:49:58,739 Running command python setup.py egg_info 2024-02-14T08:49:59,857 running egg_info 2024-02-14T08:49:59,858 creating /tmp/pip-pip-egg-info-rvqcm1m2/PheTK.egg-info 2024-02-14T08:49:59,882 writing /tmp/pip-pip-egg-info-rvqcm1m2/PheTK.egg-info/PKG-INFO 2024-02-14T08:49:59,886 writing dependency_links to /tmp/pip-pip-egg-info-rvqcm1m2/PheTK.egg-info/dependency_links.txt 2024-02-14T08:49:59,888 writing requirements to /tmp/pip-pip-egg-info-rvqcm1m2/PheTK.egg-info/requires.txt 2024-02-14T08:49:59,889 writing top-level names to /tmp/pip-pip-egg-info-rvqcm1m2/PheTK.egg-info/top_level.txt 2024-02-14T08:49:59,891 writing manifest file '/tmp/pip-pip-egg-info-rvqcm1m2/PheTK.egg-info/SOURCES.txt' 2024-02-14T08:49:59,968 reading manifest file '/tmp/pip-pip-egg-info-rvqcm1m2/PheTK.egg-info/SOURCES.txt' 2024-02-14T08:49:59,970 adding license file 'LICENSE' 2024-02-14T08:49:59,972 writing manifest file '/tmp/pip-pip-egg-info-rvqcm1m2/PheTK.egg-info/SOURCES.txt' 2024-02-14T08:50:00,078 Preparing metadata (setup.py): finished with status 'done' 2024-02-14T08:50:00,083 Source in /tmp/pip-wheel-qzcsjbxv/phetk_194d8dcae01c4d18a017e967acb033a5 has version 0.1.32, which satisfies requirement phetk==0.1.32 from https://files.pythonhosted.org/packages/1f/b5/ed528960cd6653362c05489911b5c0463db2993cc3893cda4d102b966adf/PheTK-0.1.32.tar.gz 2024-02-14T08:50:00,084 Removed phetk==0.1.32 from https://files.pythonhosted.org/packages/1f/b5/ed528960cd6653362c05489911b5c0463db2993cc3893cda4d102b966adf/PheTK-0.1.32.tar.gz from build tracker '/tmp/pip-build-tracker-6kujaewv' 2024-02-14T08:50:00,091 Created temporary directory: /tmp/pip-unpack-y1il7nr_ 2024-02-14T08:50:00,092 Created temporary directory: /tmp/pip-unpack-wo11yovy 2024-02-14T08:50:00,104 Building wheels for collected packages: phetk 2024-02-14T08:50:00,109 Created temporary directory: /tmp/pip-wheel-639i4rgb 2024-02-14T08:50:00,109 Building wheel for phetk (setup.py): started 2024-02-14T08:50:00,110 Destination directory: /tmp/pip-wheel-639i4rgb 2024-02-14T08:50:00,111 Running command python setup.py bdist_wheel 2024-02-14T08:50:01,089 running bdist_wheel 2024-02-14T08:50:01,185 running build 2024-02-14T08:50:01,185 running build_py 2024-02-14T08:50:01,212 creating build 2024-02-14T08:50:01,213 creating build/lib 2024-02-14T08:50:01,213 creating build/lib/PheTK 2024-02-14T08:50:01,214 copying src/PheTK/Demo.py -> build/lib/PheTK 2024-02-14T08:50:01,217 copying src/PheTK/Cohort.py -> build/lib/PheTK 2024-02-14T08:50:01,219 copying src/PheTK/_utils.py -> build/lib/PheTK 2024-02-14T08:50:01,221 copying src/PheTK/Plot.py -> build/lib/PheTK 2024-02-14T08:50:01,224 copying src/PheTK/__init__.py -> build/lib/PheTK 2024-02-14T08:50:01,225 copying src/PheTK/_paths.py -> build/lib/PheTK 2024-02-14T08:50:01,227 copying src/PheTK/_queries.py -> build/lib/PheTK 2024-02-14T08:50:01,229 copying src/PheTK/PheWAS.py -> build/lib/PheTK 2024-02-14T08:50:01,232 copying src/PheTK/Phecode.py -> build/lib/PheTK 2024-02-14T08:50:01,236 creating build/lib/PheTK/phecode 2024-02-14T08:50:01,237 copying src/PheTK/phecode/phecodeX_WHO.csv -> build/lib/PheTK/phecode 2024-02-14T08:50:01,274 copying src/PheTK/phecode/phecode12.csv -> build/lib/PheTK/phecode 2024-02-14T08:50:01,541 copying src/PheTK/phecode/phecodeX.csv -> build/lib/PheTK/phecode 2024-02-14T08:50:03,648 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-02-14T08:50:03,649 !! 2024-02-14T08:50:03,658 ******************************************************************************** 2024-02-14T08:50:03,659 Please avoid running ``setup.py`` directly. 2024-02-14T08:50:03,660 Instead, use pypa/build, pypa/installer or other 2024-02-14T08:50:03,661 standards-based tools. 2024-02-14T08:50:03,662 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-02-14T08:50:03,663 ******************************************************************************** 2024-02-14T08:50:03,665 !! 2024-02-14T08:50:03,666 self.initialize_options() 2024-02-14T08:50:03,702 installing to build/bdist.linux-armv7l/wheel 2024-02-14T08:50:03,703 running install 2024-02-14T08:50:03,738 running install_lib 2024-02-14T08:50:03,773 creating build/bdist.linux-armv7l 2024-02-14T08:50:03,774 creating build/bdist.linux-armv7l/wheel 2024-02-14T08:50:03,776 creating build/bdist.linux-armv7l/wheel/PheTK 2024-02-14T08:50:03,778 copying build/lib/PheTK/Demo.py -> build/bdist.linux-armv7l/wheel/PheTK 2024-02-14T08:50:03,786 copying build/lib/PheTK/Cohort.py -> build/bdist.linux-armv7l/wheel/PheTK 2024-02-14T08:50:03,789 copying build/lib/PheTK/_utils.py -> build/bdist.linux-armv7l/wheel/PheTK 2024-02-14T08:50:03,792 copying build/lib/PheTK/Plot.py -> build/bdist.linux-armv7l/wheel/PheTK 2024-02-14T08:50:03,803 copying build/lib/PheTK/__init__.py -> build/bdist.linux-armv7l/wheel/PheTK 2024-02-14T08:50:03,805 copying build/lib/PheTK/_paths.py -> build/bdist.linux-armv7l/wheel/PheTK 2024-02-14T08:50:03,808 creating build/bdist.linux-armv7l/wheel/PheTK/phecode 2024-02-14T08:50:03,809 copying build/lib/PheTK/phecode/phecodeX_WHO.csv -> build/bdist.linux-armv7l/wheel/PheTK/phecode 2024-02-14T08:50:03,842 copying build/lib/PheTK/phecode/phecode12.csv -> build/bdist.linux-armv7l/wheel/PheTK/phecode 2024-02-14T08:50:04,148 copying build/lib/PheTK/phecode/phecodeX.csv -> build/bdist.linux-armv7l/wheel/PheTK/phecode 2024-02-14T08:50:06,990 copying build/lib/PheTK/_queries.py -> build/bdist.linux-armv7l/wheel/PheTK 2024-02-14T08:50:06,997 copying build/lib/PheTK/PheWAS.py -> build/bdist.linux-armv7l/wheel/PheTK 2024-02-14T08:50:07,003 copying build/lib/PheTK/Phecode.py -> build/bdist.linux-armv7l/wheel/PheTK 2024-02-14T08:50:07,008 running install_egg_info 2024-02-14T08:50:07,097 running egg_info 2024-02-14T08:50:07,125 writing src/PheTK.egg-info/PKG-INFO 2024-02-14T08:50:07,129 writing dependency_links to src/PheTK.egg-info/dependency_links.txt 2024-02-14T08:50:07,131 writing requirements to src/PheTK.egg-info/requires.txt 2024-02-14T08:50:07,133 writing top-level names to src/PheTK.egg-info/top_level.txt 2024-02-14T08:50:07,164 reading manifest file 'src/PheTK.egg-info/SOURCES.txt' 2024-02-14T08:50:07,167 adding license file 'LICENSE' 2024-02-14T08:50:07,169 writing manifest file 'src/PheTK.egg-info/SOURCES.txt' 2024-02-14T08:50:07,171 Copying src/PheTK.egg-info to build/bdist.linux-armv7l/wheel/PheTK-0.1.32-py3.11.egg-info 2024-02-14T08:50:07,183 running install_scripts 2024-02-14T08:50:07,203 creating build/bdist.linux-armv7l/wheel/PheTK-0.1.32.dist-info/WHEEL 2024-02-14T08:50:07,205 creating '/tmp/pip-wheel-639i4rgb/PheTK-0.1.32-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-02-14T08:50:07,209 adding 'PheTK/Cohort.py' 2024-02-14T08:50:07,211 adding 'PheTK/Demo.py' 2024-02-14T08:50:07,214 adding 'PheTK/PheWAS.py' 2024-02-14T08:50:07,216 adding 'PheTK/Phecode.py' 2024-02-14T08:50:07,220 adding 'PheTK/Plot.py' 2024-02-14T08:50:07,221 adding 'PheTK/__init__.py' 2024-02-14T08:50:07,222 adding 'PheTK/_paths.py' 2024-02-14T08:50:07,224 adding 'PheTK/_queries.py' 2024-02-14T08:50:07,225 adding 'PheTK/_utils.py' 2024-02-14T08:50:07,817 adding 'PheTK/phecode/phecode12.csv' 2024-02-14T08:50:08,429 adding 'PheTK/phecode/phecodeX.csv' 2024-02-14T08:50:08,600 adding 'PheTK/phecode/phecodeX_WHO.csv' 2024-02-14T08:50:08,619 adding 'PheTK-0.1.32.dist-info/LICENSE' 2024-02-14T08:50:08,622 adding 'PheTK-0.1.32.dist-info/METADATA' 2024-02-14T08:50:08,623 adding 'PheTK-0.1.32.dist-info/WHEEL' 2024-02-14T08:50:08,626 adding 'PheTK-0.1.32.dist-info/top_level.txt' 2024-02-14T08:50:08,630 adding 'PheTK-0.1.32.dist-info/RECORD' 2024-02-14T08:50:08,703 removing build/bdist.linux-armv7l/wheel 2024-02-14T08:50:08,851 Building wheel for phetk (setup.py): finished with status 'done' 2024-02-14T08:50:08,874 Created wheel for phetk: filename=PheTK-0.1.32-py3-none-any.whl size=1363025 sha256=8bdad41b33ad4d0067f41f02f1398c6810e189cc14a3356a45376fa04b4843ee 2024-02-14T08:50:08,875 Stored in directory: /tmp/pip-ephem-wheel-cache-ebc6188y/wheels/29/db/6d/1bf551ce115b23b035e4ee8b7cd82dede2ce216a56aa69ace1 2024-02-14T08:50:08,890 Successfully built phetk 2024-02-14T08:50:09,000 Removed build tracker: '/tmp/pip-build-tracker-6kujaewv'