2024-02-15T16:16:21,615 Created temporary directory: /tmp/pip-build-tracker-c4a2no1w
2024-02-15T16:16:21,616 Initialized build tracking at /tmp/pip-build-tracker-c4a2no1w
2024-02-15T16:16:21,616 Created build tracker: /tmp/pip-build-tracker-c4a2no1w
2024-02-15T16:16:21,617 Entered build tracker: /tmp/pip-build-tracker-c4a2no1w
2024-02-15T16:16:21,617 Created temporary directory: /tmp/pip-wheel-duts23gk
2024-02-15T16:16:21,621 Created temporary directory: /tmp/pip-ephem-wheel-cache-txutrstc
2024-02-15T16:16:21,643 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-02-15T16:16:21,646 2 location(s) to search for versions of nmdc-runtime:
2024-02-15T16:16:21,646 * https://pypi.org/simple/nmdc-runtime/
2024-02-15T16:16:21,646 * https://www.piwheels.org/simple/nmdc-runtime/
2024-02-15T16:16:21,647 Fetching project page and analyzing links: https://pypi.org/simple/nmdc-runtime/
2024-02-15T16:16:21,648 Getting page https://pypi.org/simple/nmdc-runtime/
2024-02-15T16:16:21,649 Found index url https://pypi.org/simple/
2024-02-15T16:16:21,857 Fetched page https://pypi.org/simple/nmdc-runtime/ as application/vnd.pypi.simple.v1+json
2024-02-15T16:16:21,864   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/ba/44/acaca01a3fdf26351a427b58ca793a2702c1157d5125d3101029e99d0ab0/nmdc_runtime-0.1.0-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.8)
2024-02-15T16:16:21,865   Found link https://files.pythonhosted.org/packages/3d/56/9ddca8b74ed798352aca6ba02e98c7bfbf232ccb237660b2488f7da8a39e/nmdc_runtime-0.1.0.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.8), version: 0.1.0
2024-02-15T16:16:21,866   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/38/59/cb99a0e180d0de57a68cdd118ed305b68d97561a7a82da80d48992236382/nmdc_runtime-0.1.1-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.8)
2024-02-15T16:16:21,867   Found link https://files.pythonhosted.org/packages/31/0d/353b462ef1bde0cdb4f4d36b943b19f4844070641e2ad25cf4b39e10154d/nmdc_runtime-0.1.1.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.8), version: 0.1.1
2024-02-15T16:16:21,867   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/c9/32/65aa3b8e7dae9e5c896fa1fcaf559fb1784d824759c78b4c89682c681275/nmdc_runtime-0.1.3-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.8)
2024-02-15T16:16:21,868   Found link https://files.pythonhosted.org/packages/f5/f9/e540bd39ae5b2f834f09138219ba5c9beab7797821f063b93e2f0cb48c30/nmdc_runtime-0.1.3.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.8), version: 0.1.3
2024-02-15T16:16:21,869   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/91/f4/3b90e1ea7442d196974acf301cef0e2b867f811bb288b9d39cf9c75c9af0/nmdc_runtime-0.1.5-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.8)
2024-02-15T16:16:21,870   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/44/e7/dbd9b95d667293a0c7623f51f920d3e4eec16fc97c449668591ac2e404c0/nmdc_runtime-0.1.6-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.8)
2024-02-15T16:16:21,871   Found link https://files.pythonhosted.org/packages/82/26/5ed0f7ec2108a87e7f3689f6d8daa6ff3aca90fdb10ede7b65f8c6b46fa3/nmdc_runtime-0.1.6.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.8), version: 0.1.6
2024-02-15T16:16:21,871   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/25/e1/ace3cd495b80bf86380dd90c4aaa0c198e9575630b46565b41301684cd71/nmdc_runtime-1.0.1-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-02-15T16:16:21,872   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/91/13/7b4668fac66e4189055f043538ff82b1941bf1c26ec3a0c6b43881f94282/nmdc_runtime-1.0.4-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-02-15T16:16:21,873   Found link https://files.pythonhosted.org/packages/9e/90/ec35cff97b890d3460295c3429d5c8422d82a38d959dcb69dce2ce8837c0/nmdc_runtime-1.0.4.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.0.4
2024-02-15T16:16:21,874   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/ef/0b/514c8e6402048965952aa4388d7c02325fdaa593b0e47c16bf2f764a0352/nmdc_runtime-1.0.5-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-02-15T16:16:21,875   Found link https://files.pythonhosted.org/packages/a6/d4/a045432ad1e5aa78fe551f709acefb99c2daa2900a79764b6e4b24a3ff84/nmdc_runtime-1.0.5.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.0.5
2024-02-15T16:16:21,875   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/ba/50/3d96523a550ade0100a5119d6db39d4d50c53c0ce641d1122b28065ddd59/nmdc_runtime-1.0.6-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-02-15T16:16:21,876   Found link https://files.pythonhosted.org/packages/1b/14/332338c0e11e12cfc9cef95954d336975121bf9bf6bc5c9208dca1b078da/nmdc_runtime-1.0.6.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.0.6
2024-02-15T16:16:21,877   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/83/aa/294ca7f53b217ca8dd0788b77d08fb5c3688780e44bc3d111c06540ef05f/nmdc_runtime-1.0.7-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-02-15T16:16:21,877   Found link https://files.pythonhosted.org/packages/b5/d2/a8d599d0fd9c6a8e0e50d4e564acb5e8e3e956832e410c76a46d76f86ccb/nmdc_runtime-1.0.7.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.0.7
2024-02-15T16:16:21,878   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/de/d5/c7c62f5f39ec86d5ac6a716db4ca2e462bd295c9c0cd4bad4b3e01ccab17/nmdc_runtime-1.0.8-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-02-15T16:16:21,879   Found link https://files.pythonhosted.org/packages/d5/81/4f13b4623de2904fc48c01a4d2e58a09f274a65db23ee0038a0ff56bb08a/nmdc_runtime-1.0.8.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.0.8
2024-02-15T16:16:21,880   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/e5/37/b7e7eb1a426c76c4ab05590350bfce3e258bffe2ca8a069fa253bde96df9/nmdc_runtime-1.0.9-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-02-15T16:16:21,881   Found link https://files.pythonhosted.org/packages/b0/01/0d438371437d3059ca4a608b7b594c41dc79fcd58922d26379101a6345ef/nmdc_runtime-1.0.9.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.0.9
2024-02-15T16:16:21,881   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/65/d3/d255f6adef1b2dae59f12cd337641efee9474897716115fc5e11c95d4fe1/nmdc_runtime-1.0.10-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-02-15T16:16:21,882   Found link https://files.pythonhosted.org/packages/b1/f4/82f9056ec7de3de14ef373f21c9439963f373697be818989ec08d2329f34/nmdc_runtime-1.0.10.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.0.10
2024-02-15T16:16:21,883   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/53/77/c73fdac212bf196c2e3dfbf8347d160b427dff8f11e069c1a5972ce90c43/nmdc_runtime-1.0.11-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-02-15T16:16:21,884   Found link https://files.pythonhosted.org/packages/67/81/5b6010837872165ff671121bfff01d29e103997d7b394eae5453f4bdd1b9/nmdc_runtime-1.0.11.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.0.11
2024-02-15T16:16:21,885   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/13/bd/6dd46143615928b35bc35b6f246fff3cb4c55d35a8555d47f7cd7565a605/nmdc_runtime-1.0.12-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-02-15T16:16:21,886   Found link https://files.pythonhosted.org/packages/73/08/56746d739798869d3ed33ac1e8685a044effc638e5f60e0989334e3df803/nmdc_runtime-1.0.12.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.0.12
2024-02-15T16:16:21,886   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/7c/80/a8c1f0d64d6a38faa36be239477f893488fa2e80bbd9d3699996544fd35a/nmdc_runtime-1.0.13-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-02-15T16:16:21,887   Found link https://files.pythonhosted.org/packages/dd/eb/a7a49613cffd4d9835cacbb61b9b8b682346b7f7257b025e6faa922f3106/nmdc_runtime-1.0.13.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.0.13
2024-02-15T16:16:21,887   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/17/8d/0c38aaa9d5581eda908809321eb9218b90b859c2087483513edfe30e0ae9/nmdc_runtime-1.0.14-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-02-15T16:16:21,888   Found link https://files.pythonhosted.org/packages/aa/6b/6e5ecdb95c3060c389779c16813ebbd437c61519d0c923bec953b80f8b6e/nmdc_runtime-1.0.14.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.0.14
2024-02-15T16:16:21,889   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/24/60/40b5389c4d34db0aefc25a4f407a1965d297a51ce443ffcc54fcf5f0a30f/nmdc_runtime-1.1.0-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-02-15T16:16:21,890   Found link https://files.pythonhosted.org/packages/f1/af/d3edeb153597d1918967ef00cf6be6621c21043ba1549fa0f37273a01a7d/nmdc_runtime-1.1.0.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.1.0
2024-02-15T16:16:21,890   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/2d/7b/c1998db0a46f571bbc7e208e7b3a55afb254a6d1413a5fbd500368128aa9/nmdc_runtime-1.2.0-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-02-15T16:16:21,891   Found link https://files.pythonhosted.org/packages/67/bc/bd9a296ea7257aaa0c72a1f9be3a197f6e2d71c337574e3d16198cd6242e/nmdc_runtime-1.2.0.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.2.0
2024-02-15T16:16:21,892   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/b9/49/7b595d1c88a2b6de2769a572b80f625239a3ac06eef26ca283051c875498/nmdc_runtime-1.3.0-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-02-15T16:16:21,893   Found link https://files.pythonhosted.org/packages/fc/5b/4468b0402403aeecb9bf10b5381dd759e1b8ca11a5793c7c1f7e600f8068/nmdc_runtime-1.3.0.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.3.0
2024-02-15T16:16:21,893   Skipping link: No binaries permitted for nmdc-runtime: https://files.pythonhosted.org/packages/c8/c2/1f5e8d8d256e40a4e0d8cbad5fab81c25be0ada15c476e620a63675b50b6/nmdc_runtime-1.3.1-py3-none-any.whl (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-02-15T16:16:21,894   Found link https://files.pythonhosted.org/packages/56/c2/c4984f6a63857d1d70ef9582399dbea65ef4a1a88da674a87edb58496b54/nmdc_runtime-1.3.1.tar.gz (from https://pypi.org/simple/nmdc-runtime/) (requires-python:>=3.10), version: 1.3.1
2024-02-15T16:16:21,895 Fetching project page and analyzing links: https://www.piwheels.org/simple/nmdc-runtime/
2024-02-15T16:16:21,896 Getting page https://www.piwheels.org/simple/nmdc-runtime/
2024-02-15T16:16:21,897 Found index url https://www.piwheels.org/simple/
2024-02-15T16:16:22,061 Fetched page https://www.piwheels.org/simple/nmdc-runtime/ as text/html
2024-02-15T16:16:22,067   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.3.0-py3-none-any.whl#sha256=0470dc180053c632fdedb5c4790ae0a3c0a29166f757dbe51f2e9bb5016d728e (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-02-15T16:16:22,068   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.2.0-py3-none-any.whl#sha256=21a501b7fa193fe956a1a992fdcd4388ae80f57fa6354e14e2855edde761c39d (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-02-15T16:16:22,068   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.1.0-py3-none-any.whl#sha256=d53b1a410a95e2e14bfd7a88dd3ea3163a079acd47eb8f2b197e6aef02689ac3 (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-02-15T16:16:22,069   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.0.14-py3-none-any.whl#sha256=7ea5bd4e9b9348aee578b0f6c64bdc35467a36da334a44d91c50fa1417405f13 (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-02-15T16:16:22,069   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.0.13-py3-none-any.whl#sha256=31d876ee80407dc4049b210ed8c017b77723f7ad78bf89ea9ef8b07f1ea8682a (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-02-15T16:16:22,069   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.0.12-py3-none-any.whl#sha256=87d81eb829ad73563e0fa371336f03d59417e00c9dcc12d943738fa67c0287fc (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-02-15T16:16:22,070   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.0.11-py3-none-any.whl#sha256=b48456c6ad565bcca33642f19ca745d5e57105419ae1dc96efb9f51b349e7fbd (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-02-15T16:16:22,071   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.0.10-py3-none-any.whl#sha256=9575befdcc66f9de5c0c08719aa4e5986f3b8d6ec2ad11a8a8f0595ceb4b17bf (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-02-15T16:16:22,071   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.0.9-py3-none-any.whl#sha256=22b2fbd19c0c6b4fb04444a368d8051e3dfd8d8198d378f00d29177d8b6daf8e (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-02-15T16:16:22,072   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.0.8-py3-none-any.whl#sha256=b2b81313cc150e7186a150993c0df3fddcce6c61142bce79e1e6a73f689c8caa (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-02-15T16:16:22,072   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.0.7-py3-none-any.whl#sha256=bab6ec3cffaa34d52dc0205b83159f6e923847ddfdf494b0c93160e3ba061723 (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-02-15T16:16:22,073   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.0.6-py3-none-any.whl#sha256=e15ec359d56e12a347909b6f8a8e95dfd0bc3c62eeef86496220cfdd29338c4b (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-02-15T16:16:22,073   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.0.5-py3-none-any.whl#sha256=56e0d62bd48bfa043e59ef94e033c8f09581b0449928cc4ac9ec1f6052ff0a39 (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-02-15T16:16:22,074   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-1.0.4-py3-none-any.whl#sha256=5e175512550dc24c2d30b9075bb2914cafdb2c653aa60975cde6c63a2829d542 (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.10)
2024-02-15T16:16:22,075   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-0.1.6-py3-none-any.whl#sha256=5a8149e8f3e41c8fd242361d7a5918eb005bfd8e8c5639321d4ecbfe917a1292 (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.8)
2024-02-15T16:16:22,075   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-0.1.3-py3-none-any.whl#sha256=67c7cf263830bd4c4c62dff28d0073f938ecb1055f487f43a15f935ef54e461d (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.8)
2024-02-15T16:16:22,076   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-0.1.1-py3-none-any.whl#sha256=f960697437ecf9bf8309e94fbb729ae1440468a7de29b264a61fb6de39368762 (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.8)
2024-02-15T16:16:22,076   Skipping link: No binaries permitted for nmdc-runtime: https://www.piwheels.org/simple/nmdc-runtime/nmdc_runtime-0.1.0-py3-none-any.whl#sha256=7a67f7282667a4265a04bf134156531046957b197da284d9550cf19e96541943 (from https://www.piwheels.org/simple/nmdc-runtime/) (requires-python:>=3.8)
2024-02-15T16:16:22,077 Skipping link: not a file: https://www.piwheels.org/simple/nmdc-runtime/
2024-02-15T16:16:22,077 Skipping link: not a file: https://pypi.org/simple/nmdc-runtime/
2024-02-15T16:16:22,097 Given no hashes to check 1 links for project 'nmdc-runtime': discarding no candidates
2024-02-15T16:16:22,115 Collecting nmdc-runtime==1.3.1
2024-02-15T16:16:22,118   Created temporary directory: /tmp/pip-unpack-a_jvyern
2024-02-15T16:16:22,350   Downloading nmdc_runtime-1.3.1.tar.gz (63.7 MB)
2024-02-15T16:16:37,548   Added nmdc-runtime==1.3.1 from https://files.pythonhosted.org/packages/56/c2/c4984f6a63857d1d70ef9582399dbea65ef4a1a88da674a87edb58496b54/nmdc_runtime-1.3.1.tar.gz to build tracker '/tmp/pip-build-tracker-c4a2no1w'
2024-02-15T16:16:37,550   Running setup.py (path:/tmp/pip-wheel-duts23gk/nmdc-runtime_ea8a91e080954d138847a5eabb65eaf2/setup.py) egg_info for package nmdc-runtime
2024-02-15T16:16:37,551   Created temporary directory: /tmp/pip-pip-egg-info-fddp1nqp
2024-02-15T16:16:37,552   Preparing metadata (setup.py): started
2024-02-15T16:16:37,553   Running command python setup.py egg_info
2024-02-15T16:16:38,837   /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:80: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated.
2024-02-15T16:16:38,837   !!

2024-02-15T16:16:38,839           ********************************************************************************
2024-02-15T16:16:38,840           Requirements should be satisfied by a PEP 517 installer.
2024-02-15T16:16:38,841           If you are using pip, you can try `pip install --use-pep517`.
2024-02-15T16:16:38,841           ********************************************************************************

2024-02-15T16:16:38,843   !!
2024-02-15T16:16:38,844     dist.fetch_build_eggs(dist.setup_requires)
2024-02-15T16:16:42,699   WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section'
2024-02-15T16:16:42,797   running egg_info
2024-02-15T16:16:42,798   creating /tmp/pip-pip-egg-info-fddp1nqp/nmdc_runtime.egg-info
2024-02-15T16:16:42,824   writing /tmp/pip-pip-egg-info-fddp1nqp/nmdc_runtime.egg-info/PKG-INFO
2024-02-15T16:16:42,828   writing dependency_links to /tmp/pip-pip-egg-info-fddp1nqp/nmdc_runtime.egg-info/dependency_links.txt
2024-02-15T16:16:42,830   writing entry points to /tmp/pip-pip-egg-info-fddp1nqp/nmdc_runtime.egg-info/entry_points.txt
2024-02-15T16:16:42,832   writing top-level names to /tmp/pip-pip-egg-info-fddp1nqp/nmdc_runtime.egg-info/top_level.txt
2024-02-15T16:16:42,833   writing manifest file '/tmp/pip-pip-egg-info-fddp1nqp/nmdc_runtime.egg-info/SOURCES.txt'
2024-02-15T16:16:43,017   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2024-02-15T16:16:43,023   reading manifest file '/tmp/pip-pip-egg-info-fddp1nqp/nmdc_runtime.egg-info/SOURCES.txt'
2024-02-15T16:16:43,024   adding license file 'LICENSE'
2024-02-15T16:16:43,028   writing manifest file '/tmp/pip-pip-egg-info-fddp1nqp/nmdc_runtime.egg-info/SOURCES.txt'
2024-02-15T16:16:43,141   Preparing metadata (setup.py): finished with status 'done'
2024-02-15T16:16:43,145   Source in /tmp/pip-wheel-duts23gk/nmdc-runtime_ea8a91e080954d138847a5eabb65eaf2 has version 1.3.1, which satisfies requirement nmdc-runtime==1.3.1 from https://files.pythonhosted.org/packages/56/c2/c4984f6a63857d1d70ef9582399dbea65ef4a1a88da674a87edb58496b54/nmdc_runtime-1.3.1.tar.gz
2024-02-15T16:16:43,146   Removed nmdc-runtime==1.3.1 from https://files.pythonhosted.org/packages/56/c2/c4984f6a63857d1d70ef9582399dbea65ef4a1a88da674a87edb58496b54/nmdc_runtime-1.3.1.tar.gz from build tracker '/tmp/pip-build-tracker-c4a2no1w'
2024-02-15T16:16:43,152 Created temporary directory: /tmp/pip-unpack-4j0gg8gq
2024-02-15T16:16:43,153 Created temporary directory: /tmp/pip-unpack-d6xooywb
2024-02-15T16:16:43,156 Building wheels for collected packages: nmdc-runtime
2024-02-15T16:16:43,160   Created temporary directory: /tmp/pip-wheel-21ury2if
2024-02-15T16:16:43,161   Building wheel for nmdc-runtime (setup.py): started
2024-02-15T16:16:43,162   Destination directory: /tmp/pip-wheel-21ury2if
2024-02-15T16:16:43,163   Running command python setup.py bdist_wheel
2024-02-15T16:16:43,857   /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:80: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated.
2024-02-15T16:16:43,857   !!

2024-02-15T16:16:43,858           ********************************************************************************
2024-02-15T16:16:43,859           Requirements should be satisfied by a PEP 517 installer.
2024-02-15T16:16:43,859           If you are using pip, you can try `pip install --use-pep517`.
2024-02-15T16:16:43,860           ********************************************************************************

2024-02-15T16:16:43,861   !!
2024-02-15T16:16:43,862     dist.fetch_build_eggs(dist.setup_requires)
2024-02-15T16:16:44,376   WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section'
2024-02-15T16:16:44,467   running bdist_wheel
2024-02-15T16:16:44,570   running build
2024-02-15T16:16:44,571   running build_py
2024-02-15T16:16:44,600   creating build
2024-02-15T16:16:44,600   creating build/lib
2024-02-15T16:16:44,601   creating build/lib/nmdc_runtime
2024-02-15T16:16:44,603   copying nmdc_runtime/containers.py -> build/lib/nmdc_runtime
2024-02-15T16:16:44,604   copying nmdc_runtime/__init__.py -> build/lib/nmdc_runtime
2024-02-15T16:16:44,606   copying nmdc_runtime/main.py -> build/lib/nmdc_runtime
2024-02-15T16:16:44,607   copying nmdc_runtime/util.py -> build/lib/nmdc_runtime
2024-02-15T16:16:44,610   creating build/lib/nmdc_runtime/client
2024-02-15T16:16:44,611   copying nmdc_runtime/client/__init__.py -> build/lib/nmdc_runtime/client
2024-02-15T16:16:44,613   creating build/lib/nmdc_runtime/site
2024-02-15T16:16:44,614   copying nmdc_runtime/site/resources.py -> build/lib/nmdc_runtime/site
2024-02-15T16:16:44,617   copying nmdc_runtime/site/__init__.py -> build/lib/nmdc_runtime/site
2024-02-15T16:16:44,618   copying nmdc_runtime/site/repository.py -> build/lib/nmdc_runtime/site
2024-02-15T16:16:44,620   copying nmdc_runtime/site/graphs.py -> build/lib/nmdc_runtime/site
2024-02-15T16:16:44,623   copying nmdc_runtime/site/ops.py -> build/lib/nmdc_runtime/site
2024-02-15T16:16:44,625   copying nmdc_runtime/site/util.py -> build/lib/nmdc_runtime/site
2024-02-15T16:16:44,627   creating build/lib/nmdc_runtime/infrastructure
2024-02-15T16:16:44,628   copying nmdc_runtime/infrastructure/__init__.py -> build/lib/nmdc_runtime/infrastructure
2024-02-15T16:16:44,630   creating build/lib/nmdc_runtime/domain
2024-02-15T16:16:44,630   copying nmdc_runtime/domain/__init__.py -> build/lib/nmdc_runtime/domain
2024-02-15T16:16:44,632   creating build/lib/nmdc_runtime/core
2024-02-15T16:16:44,633   copying nmdc_runtime/core/__init__.py -> build/lib/nmdc_runtime/core
2024-02-15T16:16:44,635   creating build/lib/nmdc_runtime/minter
2024-02-15T16:16:44,636   copying nmdc_runtime/minter/bootstrap.py -> build/lib/nmdc_runtime/minter
2024-02-15T16:16:44,637   copying nmdc_runtime/minter/__init__.py -> build/lib/nmdc_runtime/minter
2024-02-15T16:16:44,638   copying nmdc_runtime/minter/config.py -> build/lib/nmdc_runtime/minter
2024-02-15T16:16:44,640   creating build/lib/nmdc_runtime/lib
2024-02-15T16:16:44,641   copying nmdc_runtime/lib/load_nmdc_data.py -> build/lib/nmdc_runtime/lib
2024-02-15T16:16:44,643   copying nmdc_runtime/lib/extract_nmdc_data.py -> build/lib/nmdc_runtime/lib
2024-02-15T16:16:44,644   copying nmdc_runtime/lib/nmdc_etl_class.py -> build/lib/nmdc_runtime/lib
2024-02-15T16:16:44,647   copying nmdc_runtime/lib/__init__.py -> build/lib/nmdc_runtime/lib
2024-02-15T16:16:44,648   copying nmdc_runtime/lib/nmdc_dataframes.py -> build/lib/nmdc_runtime/lib
2024-02-15T16:16:44,651   copying nmdc_runtime/lib/transform_nmdc_data.py -> build/lib/nmdc_runtime/lib
2024-02-15T16:16:44,654   creating build/lib/nmdc_runtime/site/backup
2024-02-15T16:16:44,655   copying nmdc_runtime/site/backup/__init__.py -> build/lib/nmdc_runtime/site/backup
2024-02-15T16:16:44,656   copying nmdc_runtime/site/backup/nmdcdb_mongoimport.py -> build/lib/nmdc_runtime/site/backup
2024-02-15T16:16:44,658   copying nmdc_runtime/site/backup/nmdcdb_mongodump.py -> build/lib/nmdc_runtime/site/backup
2024-02-15T16:16:44,660   copying nmdc_runtime/site/backup/nmdcdb_mongoexport.py -> build/lib/nmdc_runtime/site/backup
2024-02-15T16:16:44,663   creating build/lib/nmdc_runtime/site/changesheets
2024-02-15T16:16:44,663   copying nmdc_runtime/site/changesheets/base.py -> build/lib/nmdc_runtime/site/changesheets
2024-02-15T16:16:44,665   copying nmdc_runtime/site/changesheets/__init__.py -> build/lib/nmdc_runtime/site/changesheets
2024-02-15T16:16:44,667   creating build/lib/nmdc_runtime/site/terminusdb
2024-02-15T16:16:44,668   copying nmdc_runtime/site/terminusdb/generate.py -> build/lib/nmdc_runtime/site/terminusdb
2024-02-15T16:16:44,670   copying nmdc_runtime/site/terminusdb/ingest.py -> build/lib/nmdc_runtime/site/terminusdb
2024-02-15T16:16:44,672   copying nmdc_runtime/site/terminusdb/__init__.py -> build/lib/nmdc_runtime/site/terminusdb
2024-02-15T16:16:44,673   copying nmdc_runtime/site/terminusdb/schema.py -> build/lib/nmdc_runtime/site/terminusdb
2024-02-15T16:16:44,677   creating build/lib/nmdc_runtime/site/drsobjects
2024-02-15T16:16:44,678   copying nmdc_runtime/site/drsobjects/ingest.py -> build/lib/nmdc_runtime/site/drsobjects
2024-02-15T16:16:44,680   copying nmdc_runtime/site/drsobjects/__init__.py -> build/lib/nmdc_runtime/site/drsobjects
2024-02-15T16:16:44,681   copying nmdc_runtime/site/drsobjects/registration.py -> build/lib/nmdc_runtime/site/drsobjects
2024-02-15T16:16:44,684   creating build/lib/nmdc_runtime/site/normalization
2024-02-15T16:16:44,685   copying nmdc_runtime/site/normalization/__init__.py -> build/lib/nmdc_runtime/site/normalization
2024-02-15T16:16:44,686   copying nmdc_runtime/site/normalization/gold.py -> build/lib/nmdc_runtime/site/normalization
2024-02-15T16:16:44,688   creating build/lib/nmdc_runtime/site/export
2024-02-15T16:16:44,689   copying nmdc_runtime/site/export/__init__.py -> build/lib/nmdc_runtime/site/export
2024-02-15T16:16:44,691   copying nmdc_runtime/site/export/study_metadata.py -> build/lib/nmdc_runtime/site/export
2024-02-15T16:16:44,693   creating build/lib/nmdc_runtime/site/validation
2024-02-15T16:16:44,694   copying nmdc_runtime/site/validation/emsl.py -> build/lib/nmdc_runtime/site/validation
2024-02-15T16:16:44,696   copying nmdc_runtime/site/validation/__init__.py -> build/lib/nmdc_runtime/site/validation
2024-02-15T16:16:44,697   copying nmdc_runtime/site/validation/gold.py -> build/lib/nmdc_runtime/site/validation
2024-02-15T16:16:44,699   copying nmdc_runtime/site/validation/jgi.py -> build/lib/nmdc_runtime/site/validation
2024-02-15T16:16:44,700   copying nmdc_runtime/site/validation/util.py -> build/lib/nmdc_runtime/site/validation
2024-02-15T16:16:44,703   creating build/lib/nmdc_runtime/site/translation
2024-02-15T16:16:44,704   copying nmdc_runtime/site/translation/emsl.py -> build/lib/nmdc_runtime/site/translation
2024-02-15T16:16:44,706   copying nmdc_runtime/site/translation/neon_soil_translator.py -> build/lib/nmdc_runtime/site/translation
2024-02-15T16:16:44,708   copying nmdc_runtime/site/translation/gold_translator.py -> build/lib/nmdc_runtime/site/translation
2024-02-15T16:16:44,711   copying nmdc_runtime/site/translation/__init__.py -> build/lib/nmdc_runtime/site/translation
2024-02-15T16:16:44,712   copying nmdc_runtime/site/translation/gold.py -> build/lib/nmdc_runtime/site/translation
2024-02-15T16:16:44,713   copying nmdc_runtime/site/translation/neon_utils.py -> build/lib/nmdc_runtime/site/translation
2024-02-15T16:16:44,715   copying nmdc_runtime/site/translation/translator.py -> build/lib/nmdc_runtime/site/translation
2024-02-15T16:16:44,717   copying nmdc_runtime/site/translation/submission_portal_translator.py -> build/lib/nmdc_runtime/site/translation
2024-02-15T16:16:44,719   copying nmdc_runtime/site/translation/jgi.py -> build/lib/nmdc_runtime/site/translation
2024-02-15T16:16:44,721   copying nmdc_runtime/site/translation/neon_benthic_translator.py -> build/lib/nmdc_runtime/site/translation
2024-02-15T16:16:44,723   copying nmdc_runtime/site/translation/util.py -> build/lib/nmdc_runtime/site/translation
2024-02-15T16:16:44,726   creating build/lib/nmdc_runtime/infrastructure/database
2024-02-15T16:16:44,726   copying nmdc_runtime/infrastructure/database/db.py -> build/lib/nmdc_runtime/infrastructure/database
2024-02-15T16:16:44,728   copying nmdc_runtime/infrastructure/database/__init__.py -> build/lib/nmdc_runtime/infrastructure/database
2024-02-15T16:16:44,730   creating build/lib/nmdc_runtime/infrastructure/database/models
2024-02-15T16:16:44,731   copying nmdc_runtime/infrastructure/database/models/__init__.py -> build/lib/nmdc_runtime/infrastructure/database/models
2024-02-15T16:16:44,732   copying nmdc_runtime/infrastructure/database/models/user.py -> build/lib/nmdc_runtime/infrastructure/database/models
2024-02-15T16:16:44,735   creating build/lib/nmdc_runtime/domain/users
2024-02-15T16:16:44,736   copying nmdc_runtime/domain/users/queriesInterface.py -> build/lib/nmdc_runtime/domain/users
2024-02-15T16:16:44,737   copying nmdc_runtime/domain/users/userService.py -> build/lib/nmdc_runtime/domain/users
2024-02-15T16:16:44,739   copying nmdc_runtime/domain/users/__init__.py -> build/lib/nmdc_runtime/domain/users
2024-02-15T16:16:44,740   copying nmdc_runtime/domain/users/userSchema.py -> build/lib/nmdc_runtime/domain/users
2024-02-15T16:16:44,742   creating build/lib/nmdc_runtime/core/db
2024-02-15T16:16:44,743   copying nmdc_runtime/core/db/__init__.py -> build/lib/nmdc_runtime/core/db
2024-02-15T16:16:44,745   copying nmdc_runtime/core/db/Database.py -> build/lib/nmdc_runtime/core/db
2024-02-15T16:16:44,747   creating build/lib/nmdc_runtime/core/exceptions
2024-02-15T16:16:44,748   copying nmdc_runtime/core/exceptions/base.py -> build/lib/nmdc_runtime/core/exceptions
2024-02-15T16:16:44,750   copying nmdc_runtime/core/exceptions/token.py -> build/lib/nmdc_runtime/core/exceptions
2024-02-15T16:16:44,752   copying nmdc_runtime/core/exceptions/__init__.py -> build/lib/nmdc_runtime/core/exceptions
2024-02-15T16:16:44,755   creating build/lib/nmdc_runtime/minter/adapters
2024-02-15T16:16:44,756   copying nmdc_runtime/minter/adapters/__init__.py -> build/lib/nmdc_runtime/minter/adapters
2024-02-15T16:16:44,757   copying nmdc_runtime/minter/adapters/repository.py -> build/lib/nmdc_runtime/minter/adapters
2024-02-15T16:16:44,760   creating build/lib/nmdc_runtime/minter/domain
2024-02-15T16:16:44,760   copying nmdc_runtime/minter/domain/__init__.py -> build/lib/nmdc_runtime/minter/domain
2024-02-15T16:16:44,762   copying nmdc_runtime/minter/domain/model.py -> build/lib/nmdc_runtime/minter/domain
2024-02-15T16:16:44,764   creating build/lib/nmdc_runtime/minter/entrypoints
2024-02-15T16:16:44,764   copying nmdc_runtime/minter/entrypoints/__init__.py -> build/lib/nmdc_runtime/minter/entrypoints
2024-02-15T16:16:44,766   copying nmdc_runtime/minter/entrypoints/fastapi_app.py -> build/lib/nmdc_runtime/minter/entrypoints
2024-02-15T16:16:44,815   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2024-02-15T16:16:44,815   !!

2024-02-15T16:16:44,816           ********************************************************************************
2024-02-15T16:16:44,817           Please avoid running ``setup.py`` directly.
2024-02-15T16:16:44,818           Instead, use pypa/build, pypa/installer or other
2024-02-15T16:16:44,818           standards-based tools.

2024-02-15T16:16:44,819           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2024-02-15T16:16:44,820           ********************************************************************************

2024-02-15T16:16:44,821   !!
2024-02-15T16:16:44,821     self.initialize_options()
2024-02-15T16:16:44,844   installing to build/bdist.linux-armv7l/wheel
2024-02-15T16:16:44,845   running install
2024-02-15T16:16:44,868   running install_lib
2024-02-15T16:16:44,895   creating build/bdist.linux-armv7l
2024-02-15T16:16:44,895   creating build/bdist.linux-armv7l/wheel
2024-02-15T16:16:44,897   creating build/bdist.linux-armv7l/wheel/nmdc_runtime
2024-02-15T16:16:44,898   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/client
2024-02-15T16:16:44,899   copying build/lib/nmdc_runtime/client/__init__.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/client
2024-02-15T16:16:44,901   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/site
2024-02-15T16:16:44,902   copying build/lib/nmdc_runtime/site/resources.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site
2024-02-15T16:16:44,905   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/site/backup
2024-02-15T16:16:44,906   copying build/lib/nmdc_runtime/site/backup/__init__.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/backup
2024-02-15T16:16:44,908   copying build/lib/nmdc_runtime/site/backup/nmdcdb_mongoimport.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/backup
2024-02-15T16:16:44,909   copying build/lib/nmdc_runtime/site/backup/nmdcdb_mongodump.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/backup
2024-02-15T16:16:44,911   copying build/lib/nmdc_runtime/site/backup/nmdcdb_mongoexport.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/backup
2024-02-15T16:16:44,913   copying build/lib/nmdc_runtime/site/__init__.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site
2024-02-15T16:16:44,915   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/site/changesheets
2024-02-15T16:16:44,916   copying build/lib/nmdc_runtime/site/changesheets/base.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/changesheets
2024-02-15T16:16:44,918   copying build/lib/nmdc_runtime/site/changesheets/__init__.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/changesheets
2024-02-15T16:16:44,920   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/site/terminusdb
2024-02-15T16:16:44,921   copying build/lib/nmdc_runtime/site/terminusdb/generate.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/terminusdb
2024-02-15T16:16:44,924   copying build/lib/nmdc_runtime/site/terminusdb/ingest.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/terminusdb
2024-02-15T16:16:44,925   copying build/lib/nmdc_runtime/site/terminusdb/__init__.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/terminusdb
2024-02-15T16:16:44,927   copying build/lib/nmdc_runtime/site/terminusdb/schema.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/terminusdb
2024-02-15T16:16:44,931   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/site/drsobjects
2024-02-15T16:16:44,932   copying build/lib/nmdc_runtime/site/drsobjects/ingest.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/drsobjects
2024-02-15T16:16:44,934   copying build/lib/nmdc_runtime/site/drsobjects/__init__.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/drsobjects
2024-02-15T16:16:44,935   copying build/lib/nmdc_runtime/site/drsobjects/registration.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/drsobjects
2024-02-15T16:16:44,937   copying build/lib/nmdc_runtime/site/repository.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site
2024-02-15T16:16:44,940   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/site/normalization
2024-02-15T16:16:44,941   copying build/lib/nmdc_runtime/site/normalization/__init__.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/normalization
2024-02-15T16:16:44,942   copying build/lib/nmdc_runtime/site/normalization/gold.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/normalization
2024-02-15T16:16:44,944   copying build/lib/nmdc_runtime/site/graphs.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site
2024-02-15T16:16:44,947   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/site/export
2024-02-15T16:16:44,948   copying build/lib/nmdc_runtime/site/export/__init__.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/export
2024-02-15T16:16:44,949   copying build/lib/nmdc_runtime/site/export/study_metadata.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/export
2024-02-15T16:16:44,952   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/site/validation
2024-02-15T16:16:44,953   copying build/lib/nmdc_runtime/site/validation/emsl.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/validation
2024-02-15T16:16:44,955   copying build/lib/nmdc_runtime/site/validation/__init__.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/validation
2024-02-15T16:16:44,956   copying build/lib/nmdc_runtime/site/validation/gold.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/validation
2024-02-15T16:16:44,958   copying build/lib/nmdc_runtime/site/validation/jgi.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/validation
2024-02-15T16:16:44,960   copying build/lib/nmdc_runtime/site/validation/util.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/validation
2024-02-15T16:16:44,962   copying build/lib/nmdc_runtime/site/ops.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site
2024-02-15T16:16:44,965   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/site/translation
2024-02-15T16:16:44,966   copying build/lib/nmdc_runtime/site/translation/emsl.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/translation
2024-02-15T16:16:44,968   copying build/lib/nmdc_runtime/site/translation/neon_soil_translator.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/translation
2024-02-15T16:16:44,971   copying build/lib/nmdc_runtime/site/translation/gold_translator.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/translation
2024-02-15T16:16:44,974   copying build/lib/nmdc_runtime/site/translation/__init__.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/translation
2024-02-15T16:16:44,975   copying build/lib/nmdc_runtime/site/translation/gold.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/translation
2024-02-15T16:16:44,978   copying build/lib/nmdc_runtime/site/translation/neon_utils.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/translation
2024-02-15T16:16:44,980   copying build/lib/nmdc_runtime/site/translation/translator.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/translation
2024-02-15T16:16:44,982   copying build/lib/nmdc_runtime/site/translation/submission_portal_translator.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/translation
2024-02-15T16:16:44,985   copying build/lib/nmdc_runtime/site/translation/jgi.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/translation
2024-02-15T16:16:44,986   copying build/lib/nmdc_runtime/site/translation/neon_benthic_translator.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/translation
2024-02-15T16:16:44,989   copying build/lib/nmdc_runtime/site/translation/util.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site/translation
2024-02-15T16:16:44,991   copying build/lib/nmdc_runtime/site/util.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/site
2024-02-15T16:16:44,993   copying build/lib/nmdc_runtime/containers.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime
2024-02-15T16:16:44,995   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/infrastructure
2024-02-15T16:16:44,996   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/infrastructure/database
2024-02-15T16:16:44,997   copying build/lib/nmdc_runtime/infrastructure/database/db.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/infrastructure/database
2024-02-15T16:16:44,999   copying build/lib/nmdc_runtime/infrastructure/database/__init__.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/infrastructure/database
2024-02-15T16:16:45,001   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/infrastructure/database/models
2024-02-15T16:16:45,002   copying build/lib/nmdc_runtime/infrastructure/database/models/__init__.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/infrastructure/database/models
2024-02-15T16:16:45,004   copying build/lib/nmdc_runtime/infrastructure/database/models/user.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/infrastructure/database/models
2024-02-15T16:16:45,005   copying build/lib/nmdc_runtime/infrastructure/__init__.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/infrastructure
2024-02-15T16:16:45,007   copying build/lib/nmdc_runtime/__init__.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime
2024-02-15T16:16:45,009   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/domain
2024-02-15T16:16:45,010   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/domain/users
2024-02-15T16:16:45,011   copying build/lib/nmdc_runtime/domain/users/queriesInterface.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/domain/users
2024-02-15T16:16:45,013   copying build/lib/nmdc_runtime/domain/users/userService.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/domain/users
2024-02-15T16:16:45,015   copying build/lib/nmdc_runtime/domain/users/__init__.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/domain/users
2024-02-15T16:16:45,016   copying build/lib/nmdc_runtime/domain/users/userSchema.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/domain/users
2024-02-15T16:16:45,018   copying build/lib/nmdc_runtime/domain/__init__.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/domain
2024-02-15T16:16:45,020   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/core
2024-02-15T16:16:45,022   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/core/db
2024-02-15T16:16:45,023   copying build/lib/nmdc_runtime/core/db/__init__.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/core/db
2024-02-15T16:16:45,024   copying build/lib/nmdc_runtime/core/db/Database.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/core/db
2024-02-15T16:16:45,026   copying build/lib/nmdc_runtime/core/__init__.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/core
2024-02-15T16:16:45,028   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/core/exceptions
2024-02-15T16:16:45,029   copying build/lib/nmdc_runtime/core/exceptions/base.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/core/exceptions
2024-02-15T16:16:45,031   copying build/lib/nmdc_runtime/core/exceptions/token.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/core/exceptions
2024-02-15T16:16:45,033   copying build/lib/nmdc_runtime/core/exceptions/__init__.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/core/exceptions
2024-02-15T16:16:45,035   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/minter
2024-02-15T16:16:45,037   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/minter/adapters
2024-02-15T16:16:45,038   copying build/lib/nmdc_runtime/minter/adapters/__init__.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/minter/adapters
2024-02-15T16:16:45,039   copying build/lib/nmdc_runtime/minter/adapters/repository.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/minter/adapters
2024-02-15T16:16:45,041   copying build/lib/nmdc_runtime/minter/bootstrap.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/minter
2024-02-15T16:16:45,043   copying build/lib/nmdc_runtime/minter/__init__.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/minter
2024-02-15T16:16:45,045   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/minter/domain
2024-02-15T16:16:45,046   copying build/lib/nmdc_runtime/minter/domain/__init__.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/minter/domain
2024-02-15T16:16:45,047   copying build/lib/nmdc_runtime/minter/domain/model.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/minter/domain
2024-02-15T16:16:45,049   copying build/lib/nmdc_runtime/minter/config.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/minter
2024-02-15T16:16:45,051   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/minter/entrypoints
2024-02-15T16:16:45,052   copying build/lib/nmdc_runtime/minter/entrypoints/__init__.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/minter/entrypoints
2024-02-15T16:16:45,053   copying build/lib/nmdc_runtime/minter/entrypoints/fastapi_app.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/minter/entrypoints
2024-02-15T16:16:45,055   creating build/bdist.linux-armv7l/wheel/nmdc_runtime/lib
2024-02-15T16:16:45,056   copying build/lib/nmdc_runtime/lib/load_nmdc_data.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/lib
2024-02-15T16:16:45,058   copying build/lib/nmdc_runtime/lib/extract_nmdc_data.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/lib
2024-02-15T16:16:45,060   copying build/lib/nmdc_runtime/lib/nmdc_etl_class.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/lib
2024-02-15T16:16:45,062   copying build/lib/nmdc_runtime/lib/__init__.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/lib
2024-02-15T16:16:45,064   copying build/lib/nmdc_runtime/lib/nmdc_dataframes.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/lib
2024-02-15T16:16:45,067   copying build/lib/nmdc_runtime/lib/transform_nmdc_data.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime/lib
2024-02-15T16:16:45,070   copying build/lib/nmdc_runtime/main.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime
2024-02-15T16:16:45,071   copying build/lib/nmdc_runtime/util.py -> build/bdist.linux-armv7l/wheel/nmdc_runtime
2024-02-15T16:16:45,074   running install_egg_info
2024-02-15T16:16:45,127   running egg_info
2024-02-15T16:16:45,153   writing nmdc_runtime.egg-info/PKG-INFO
2024-02-15T16:16:45,157   writing dependency_links to nmdc_runtime.egg-info/dependency_links.txt
2024-02-15T16:16:45,158   writing entry points to nmdc_runtime.egg-info/entry_points.txt
2024-02-15T16:16:45,160   writing top-level names to nmdc_runtime.egg-info/top_level.txt
2024-02-15T16:16:45,266   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2024-02-15T16:16:45,269   reading manifest file 'nmdc_runtime.egg-info/SOURCES.txt'
2024-02-15T16:16:45,327   adding license file 'LICENSE'
2024-02-15T16:16:45,344   writing manifest file 'nmdc_runtime.egg-info/SOURCES.txt'
2024-02-15T16:16:45,346   Copying nmdc_runtime.egg-info to build/bdist.linux-armv7l/wheel/nmdc_runtime-1.3.1-py3.11.egg-info
2024-02-15T16:16:45,357   running install_scripts
2024-02-15T16:16:45,371   creating build/bdist.linux-armv7l/wheel/nmdc_runtime-1.3.1.dist-info/WHEEL
2024-02-15T16:16:45,373   creating '/tmp/pip-wheel-21ury2if/nmdc_runtime-1.3.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-02-15T16:16:45,375   adding 'nmdc_runtime/__init__.py'
2024-02-15T16:16:45,376   adding 'nmdc_runtime/containers.py'
2024-02-15T16:16:45,377   adding 'nmdc_runtime/main.py'
2024-02-15T16:16:45,380   adding 'nmdc_runtime/util.py'
2024-02-15T16:16:45,382   adding 'nmdc_runtime/client/__init__.py'
2024-02-15T16:16:45,383   adding 'nmdc_runtime/core/__init__.py'
2024-02-15T16:16:45,385   adding 'nmdc_runtime/core/db/Database.py'
2024-02-15T16:16:45,386   adding 'nmdc_runtime/core/db/__init__.py'
2024-02-15T16:16:45,388   adding 'nmdc_runtime/core/exceptions/__init__.py'
2024-02-15T16:16:45,389   adding 'nmdc_runtime/core/exceptions/base.py'
2024-02-15T16:16:45,390   adding 'nmdc_runtime/core/exceptions/token.py'
2024-02-15T16:16:45,392   adding 'nmdc_runtime/domain/__init__.py'
2024-02-15T16:16:45,393   adding 'nmdc_runtime/domain/users/__init__.py'
2024-02-15T16:16:45,394   adding 'nmdc_runtime/domain/users/queriesInterface.py'
2024-02-15T16:16:45,395   adding 'nmdc_runtime/domain/users/userSchema.py'
2024-02-15T16:16:45,396   adding 'nmdc_runtime/domain/users/userService.py'
2024-02-15T16:16:45,398   adding 'nmdc_runtime/infrastructure/__init__.py'
2024-02-15T16:16:45,399   adding 'nmdc_runtime/infrastructure/database/__init__.py'
2024-02-15T16:16:45,400   adding 'nmdc_runtime/infrastructure/database/db.py'
2024-02-15T16:16:45,401   adding 'nmdc_runtime/infrastructure/database/models/__init__.py'
2024-02-15T16:16:45,402   adding 'nmdc_runtime/infrastructure/database/models/user.py'
2024-02-15T16:16:45,404   adding 'nmdc_runtime/lib/__init__.py'
2024-02-15T16:16:45,405   adding 'nmdc_runtime/lib/extract_nmdc_data.py'
2024-02-15T16:16:45,406   adding 'nmdc_runtime/lib/load_nmdc_data.py'
2024-02-15T16:16:45,410   adding 'nmdc_runtime/lib/nmdc_dataframes.py'
2024-02-15T16:16:45,411   adding 'nmdc_runtime/lib/nmdc_etl_class.py'
2024-02-15T16:16:45,417   adding 'nmdc_runtime/lib/transform_nmdc_data.py'
2024-02-15T16:16:45,418   adding 'nmdc_runtime/minter/__init__.py'
2024-02-15T16:16:45,420   adding 'nmdc_runtime/minter/bootstrap.py'
2024-02-15T16:16:45,421   adding 'nmdc_runtime/minter/config.py'
2024-02-15T16:16:45,422   adding 'nmdc_runtime/minter/adapters/__init__.py'
2024-02-15T16:16:45,424   adding 'nmdc_runtime/minter/adapters/repository.py'
2024-02-15T16:16:45,425   adding 'nmdc_runtime/minter/domain/__init__.py'
2024-02-15T16:16:45,427   adding 'nmdc_runtime/minter/domain/model.py'
2024-02-15T16:16:45,428   adding 'nmdc_runtime/minter/entrypoints/__init__.py'
2024-02-15T16:16:45,430   adding 'nmdc_runtime/minter/entrypoints/fastapi_app.py'
2024-02-15T16:16:45,431   adding 'nmdc_runtime/site/__init__.py'
2024-02-15T16:16:45,433   adding 'nmdc_runtime/site/graphs.py'
2024-02-15T16:16:45,436   adding 'nmdc_runtime/site/ops.py'
2024-02-15T16:16:45,439   adding 'nmdc_runtime/site/repository.py'
2024-02-15T16:16:45,442   adding 'nmdc_runtime/site/resources.py'
2024-02-15T16:16:45,443   adding 'nmdc_runtime/site/util.py'
2024-02-15T16:16:45,445   adding 'nmdc_runtime/site/backup/__init__.py'
2024-02-15T16:16:45,446   adding 'nmdc_runtime/site/backup/nmdcdb_mongodump.py'
2024-02-15T16:16:45,447   adding 'nmdc_runtime/site/backup/nmdcdb_mongoexport.py'
2024-02-15T16:16:45,449   adding 'nmdc_runtime/site/backup/nmdcdb_mongoimport.py'
2024-02-15T16:16:45,450   adding 'nmdc_runtime/site/changesheets/__init__.py'
2024-02-15T16:16:45,452   adding 'nmdc_runtime/site/changesheets/base.py'
2024-02-15T16:16:45,453   adding 'nmdc_runtime/site/drsobjects/__init__.py'
2024-02-15T16:16:45,455   adding 'nmdc_runtime/site/drsobjects/ingest.py'
2024-02-15T16:16:45,456   adding 'nmdc_runtime/site/drsobjects/registration.py'
2024-02-15T16:16:45,458   adding 'nmdc_runtime/site/export/__init__.py'
2024-02-15T16:16:45,459   adding 'nmdc_runtime/site/export/study_metadata.py'
2024-02-15T16:16:45,461   adding 'nmdc_runtime/site/normalization/__init__.py'
2024-02-15T16:16:45,462   adding 'nmdc_runtime/site/normalization/gold.py'
2024-02-15T16:16:45,464   adding 'nmdc_runtime/site/terminusdb/__init__.py'
2024-02-15T16:16:45,465   adding 'nmdc_runtime/site/terminusdb/generate.py'
2024-02-15T16:16:45,466   adding 'nmdc_runtime/site/terminusdb/ingest.py'
2024-02-15T16:16:45,474   adding 'nmdc_runtime/site/terminusdb/schema.py'
2024-02-15T16:16:45,476   adding 'nmdc_runtime/site/translation/__init__.py'
2024-02-15T16:16:45,478   adding 'nmdc_runtime/site/translation/emsl.py'
2024-02-15T16:16:45,479   adding 'nmdc_runtime/site/translation/gold.py'
2024-02-15T16:16:45,482   adding 'nmdc_runtime/site/translation/gold_translator.py'
2024-02-15T16:16:45,483   adding 'nmdc_runtime/site/translation/jgi.py'
2024-02-15T16:16:45,485   adding 'nmdc_runtime/site/translation/neon_benthic_translator.py'
2024-02-15T16:16:45,489   adding 'nmdc_runtime/site/translation/neon_soil_translator.py'
2024-02-15T16:16:45,490   adding 'nmdc_runtime/site/translation/neon_utils.py'
2024-02-15T16:16:45,493   adding 'nmdc_runtime/site/translation/submission_portal_translator.py'
2024-02-15T16:16:45,495   adding 'nmdc_runtime/site/translation/translator.py'
2024-02-15T16:16:45,496   adding 'nmdc_runtime/site/translation/util.py'
2024-02-15T16:16:45,498   adding 'nmdc_runtime/site/validation/__init__.py'
2024-02-15T16:16:45,499   adding 'nmdc_runtime/site/validation/emsl.py'
2024-02-15T16:16:45,500   adding 'nmdc_runtime/site/validation/gold.py'
2024-02-15T16:16:45,501   adding 'nmdc_runtime/site/validation/jgi.py'
2024-02-15T16:16:45,502   adding 'nmdc_runtime/site/validation/util.py'
2024-02-15T16:16:45,504   adding 'nmdc_runtime-1.3.1.dist-info/LICENSE'
2024-02-15T16:16:45,506   adding 'nmdc_runtime-1.3.1.dist-info/METADATA'
2024-02-15T16:16:45,507   adding 'nmdc_runtime-1.3.1.dist-info/WHEEL'
2024-02-15T16:16:45,508   adding 'nmdc_runtime-1.3.1.dist-info/entry_points.txt'
2024-02-15T16:16:45,509   adding 'nmdc_runtime-1.3.1.dist-info/top_level.txt'
2024-02-15T16:16:45,510   adding 'nmdc_runtime-1.3.1.dist-info/RECORD'
2024-02-15T16:16:45,514   removing build/bdist.linux-armv7l/wheel
2024-02-15T16:16:45,652   Building wheel for nmdc-runtime (setup.py): finished with status 'done'
2024-02-15T16:16:45,655   Created wheel for nmdc-runtime: filename=nmdc_runtime-1.3.1-py3-none-any.whl size=127807 sha256=e834d6af867ba48cdb583ced165576b8822b7deac757a402baf9864304792e0d
2024-02-15T16:16:45,657   Stored in directory: /tmp/pip-ephem-wheel-cache-txutrstc/wheels/40/3b/0a/0720dd2fba161a83bb679b62a63da746244302d90c95608e49
2024-02-15T16:16:45,670 Successfully built nmdc-runtime
2024-02-15T16:16:45,677 Removed build tracker: '/tmp/pip-build-tracker-c4a2no1w'