2024-02-17T16:29:29,752 Created temporary directory: /tmp/pip-build-tracker-3jzawj39 2024-02-17T16:29:29,754 Initialized build tracking at /tmp/pip-build-tracker-3jzawj39 2024-02-17T16:29:29,754 Created build tracker: /tmp/pip-build-tracker-3jzawj39 2024-02-17T16:29:29,754 Entered build tracker: /tmp/pip-build-tracker-3jzawj39 2024-02-17T16:29:29,755 Created temporary directory: /tmp/pip-wheel-_zxfh94f 2024-02-17T16:29:29,758 Created temporary directory: /tmp/pip-ephem-wheel-cache-podnexd7 2024-02-17T16:29:29,780 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-02-17T16:29:29,783 2 location(s) to search for versions of ccp4ed: 2024-02-17T16:29:29,783 * https://pypi.org/simple/ccp4ed/ 2024-02-17T16:29:29,783 * https://www.piwheels.org/simple/ccp4ed/ 2024-02-17T16:29:29,784 Fetching project page and analyzing links: https://pypi.org/simple/ccp4ed/ 2024-02-17T16:29:29,785 Getting page https://pypi.org/simple/ccp4ed/ 2024-02-17T16:29:29,786 Found index url https://pypi.org/simple/ 2024-02-17T16:29:29,998 Fetched page https://pypi.org/simple/ccp4ed/ as application/vnd.pypi.simple.v1+json 2024-02-17T16:29:30,000 Skipping link: No binaries permitted for ccp4ed: https://files.pythonhosted.org/packages/97/f4/03499706218da1ae5a1650e97d27058e51d9e8e13ea6b173df09b80ca078/ccp4ED-1.0.8-py3-none-any.whl (from https://pypi.org/simple/ccp4ed/) (requires-python:>=3.6) 2024-02-17T16:29:30,001 Found link https://files.pythonhosted.org/packages/bf/ac/25c0da7a63a0da5d7bb46ec32769735b2eb31cc65b9e83732838ad6195b8/ccp4ED-1.0.8.tar.gz (from https://pypi.org/simple/ccp4ed/) (requires-python:>=3.6), version: 1.0.8 2024-02-17T16:29:30,002 Skipping link: No binaries permitted for ccp4ed: https://files.pythonhosted.org/packages/0c/8d/c45907da154b229db8d3db6306cbace7e3bd2beaf0ccc590c11f2a519b3a/ccp4ED-1.0.9-py3-none-any.whl (from https://pypi.org/simple/ccp4ed/) (requires-python:>=3.6) 2024-02-17T16:29:30,003 Found link https://files.pythonhosted.org/packages/e2/27/074e1ec01336daf703fec32c8eb0223864d78546262b6f874d5d0dc8db9b/ccp4ED-1.0.9.tar.gz (from https://pypi.org/simple/ccp4ed/) (requires-python:>=3.6), version: 1.0.9 2024-02-17T16:29:30,003 Skipping link: No binaries permitted for ccp4ed: https://files.pythonhosted.org/packages/58/52/8f679d0709b2767aae9c940ecf9f39029cef0930ff0e992371ce4d5b3979/ccp4ED-1.1.0-py3-none-any.whl (from https://pypi.org/simple/ccp4ed/) (requires-python:>=3.6) 2024-02-17T16:29:30,004 Found link https://files.pythonhosted.org/packages/c3/f6/3a305f31fa6827f739e6e8e471377d39e1d098e02cf4ef8262291612ff00/ccp4ED-1.1.0.tar.gz (from https://pypi.org/simple/ccp4ed/) (requires-python:>=3.6), version: 1.1.0 2024-02-17T16:29:30,005 Skipping link: No binaries permitted for ccp4ed: https://files.pythonhosted.org/packages/02/39/eeee59c6e397aafe727b3cad8b7c67e12333232b02bc7ac7f12d67ed51a9/ccp4ED-1.3-py3-none-any.whl (from https://pypi.org/simple/ccp4ed/) (requires-python:>=3.6) 2024-02-17T16:29:30,006 Found link https://files.pythonhosted.org/packages/74/c8/4d19f31ef95c0a0cc6ec62968543bfb886cba70e01a7937d6691692c3bcb/ccp4ED-1.3.tar.gz (from https://pypi.org/simple/ccp4ed/) (requires-python:>=3.6), version: 1.3 2024-02-17T16:29:30,007 Fetching project page and analyzing links: https://www.piwheels.org/simple/ccp4ed/ 2024-02-17T16:29:30,008 Getting page https://www.piwheels.org/simple/ccp4ed/ 2024-02-17T16:29:30,009 Found index url https://www.piwheels.org/simple/ 2024-02-17T16:29:30,166 Fetched page https://www.piwheels.org/simple/ccp4ed/ as text/html 2024-02-17T16:29:30,168 Skipping link: No binaries permitted for ccp4ed: https://www.piwheels.org/simple/ccp4ed/ccp4ED-1.1.0-py3-none-any.whl#sha256=4d88fd3107ae6b341b4e650e4f418f402060f00198f010f872548a2545bf4c8d (from https://www.piwheels.org/simple/ccp4ed/) (requires-python:>=3.6) 2024-02-17T16:29:30,169 Skipping link: No binaries permitted for ccp4ed: https://www.piwheels.org/simple/ccp4ed/ccp4ED-1.0.9-py3-none-any.whl#sha256=cb39bdd8543fb27a914fb3a45fbcf0d7473d8a9440ced27357ffaa2e03f3cf62 (from https://www.piwheels.org/simple/ccp4ed/) (requires-python:>=3.6) 2024-02-17T16:29:30,169 Skipping link: No binaries permitted for ccp4ed: https://www.piwheels.org/simple/ccp4ed/ccp4ED-1.0.8-py3-none-any.whl#sha256=81e637c6bcc5527559da094bcd048deda55ca27c9311a420e578a4f3ad56dd59 (from https://www.piwheels.org/simple/ccp4ed/) (requires-python:>=3.6) 2024-02-17T16:29:30,170 Skipping link: not a file: https://www.piwheels.org/simple/ccp4ed/ 2024-02-17T16:29:30,171 Skipping link: not a file: https://pypi.org/simple/ccp4ed/ 2024-02-17T16:29:30,191 Given no hashes to check 1 links for project 'ccp4ed': discarding no candidates 2024-02-17T16:29:30,210 Collecting ccp4ed==1.3 2024-02-17T16:29:30,212 Created temporary directory: /tmp/pip-unpack-7agobj0f 2024-02-17T16:29:30,681 Downloading ccp4ED-1.3.tar.gz (1.6 MB) 2024-02-17T16:29:31,854 Added ccp4ed==1.3 from https://files.pythonhosted.org/packages/74/c8/4d19f31ef95c0a0cc6ec62968543bfb886cba70e01a7937d6691692c3bcb/ccp4ED-1.3.tar.gz to build tracker '/tmp/pip-build-tracker-3jzawj39' 2024-02-17T16:29:31,856 Running setup.py (path:/tmp/pip-wheel-_zxfh94f/ccp4ed_e3c412aa82484ecf96a43739ba7a4b62/setup.py) egg_info for package ccp4ed 2024-02-17T16:29:31,856 Created temporary directory: /tmp/pip-pip-egg-info-mz7bh7hc 2024-02-17T16:29:31,857 Preparing metadata (setup.py): started 2024-02-17T16:29:31,858 Running command python setup.py egg_info 2024-02-17T16:29:32,701 running egg_info 2024-02-17T16:29:32,702 creating /tmp/pip-pip-egg-info-mz7bh7hc/ccp4ED.egg-info 2024-02-17T16:29:32,728 writing /tmp/pip-pip-egg-info-mz7bh7hc/ccp4ED.egg-info/PKG-INFO 2024-02-17T16:29:32,731 writing dependency_links to /tmp/pip-pip-egg-info-mz7bh7hc/ccp4ED.egg-info/dependency_links.txt 2024-02-17T16:29:32,733 writing requirements to /tmp/pip-pip-egg-info-mz7bh7hc/ccp4ED.egg-info/requires.txt 2024-02-17T16:29:32,734 writing top-level names to /tmp/pip-pip-egg-info-mz7bh7hc/ccp4ED.egg-info/top_level.txt 2024-02-17T16:29:32,736 writing manifest file '/tmp/pip-pip-egg-info-mz7bh7hc/ccp4ED.egg-info/SOURCES.txt' 2024-02-17T16:29:32,821 reading manifest file '/tmp/pip-pip-egg-info-mz7bh7hc/ccp4ED.egg-info/SOURCES.txt' 2024-02-17T16:29:32,825 writing manifest file '/tmp/pip-pip-egg-info-mz7bh7hc/ccp4ED.egg-info/SOURCES.txt' 2024-02-17T16:29:32,923 Preparing metadata (setup.py): finished with status 'done' 2024-02-17T16:29:32,928 Source in /tmp/pip-wheel-_zxfh94f/ccp4ed_e3c412aa82484ecf96a43739ba7a4b62 has version 1.3, which satisfies requirement ccp4ed==1.3 from https://files.pythonhosted.org/packages/74/c8/4d19f31ef95c0a0cc6ec62968543bfb886cba70e01a7937d6691692c3bcb/ccp4ED-1.3.tar.gz 2024-02-17T16:29:32,929 Removed ccp4ed==1.3 from https://files.pythonhosted.org/packages/74/c8/4d19f31ef95c0a0cc6ec62968543bfb886cba70e01a7937d6691692c3bcb/ccp4ED-1.3.tar.gz from build tracker '/tmp/pip-build-tracker-3jzawj39' 2024-02-17T16:29:32,935 Created temporary directory: /tmp/pip-unpack-jwr09nyw 2024-02-17T16:29:32,936 Created temporary directory: /tmp/pip-unpack-r97w72js 2024-02-17T16:29:32,952 Building wheels for collected packages: ccp4ed 2024-02-17T16:29:32,956 Created temporary directory: /tmp/pip-wheel-1zzybnj3 2024-02-17T16:29:32,956 Building wheel for ccp4ed (setup.py): started 2024-02-17T16:29:32,958 Destination directory: /tmp/pip-wheel-1zzybnj3 2024-02-17T16:29:32,958 Running command python setup.py bdist_wheel 2024-02-17T16:29:33,758 running bdist_wheel 2024-02-17T16:29:33,886 running build 2024-02-17T16:29:33,887 running build_py 2024-02-17T16:29:33,914 creating build 2024-02-17T16:29:33,915 creating build/lib 2024-02-17T16:29:33,916 creating build/lib/multislice 2024-02-17T16:29:33,917 copying multislice/rotating_crystal.py -> build/lib/multislice 2024-02-17T16:29:33,920 copying multislice/__init__.py -> build/lib/multislice 2024-02-17T16:29:33,921 copying multislice/ED_base.py -> build/lib/multislice 2024-02-17T16:29:33,923 copying multislice/postprocess.py -> build/lib/multislice 2024-02-17T16:29:33,925 copying multislice/config.py -> build/lib/multislice 2024-02-17T16:29:33,927 copying multislice/pets.py -> build/lib/multislice 2024-02-17T16:29:33,929 copying multislice/interaction_parameter.py -> build/lib/multislice 2024-02-17T16:29:33,931 copying multislice/multi_2D.py -> build/lib/multislice 2024-02-17T16:29:33,933 copying multislice/multi_3D.py -> build/lib/multislice 2024-02-17T16:29:33,935 copying multislice/import.py -> build/lib/multislice 2024-02-17T16:29:33,937 copying multislice/pymultislice.py -> build/lib/multislice 2024-02-17T16:29:33,939 copying multislice/multislice.py -> build/lib/multislice 2024-02-17T16:29:33,942 copying multislice/mupy_utils.py -> build/lib/multislice 2024-02-17T16:29:33,945 creating build/lib/nearBragg 2024-02-17T16:29:33,946 copying nearBragg/__init__.py -> build/lib/nearBragg 2024-02-17T16:29:33,947 copying nearBragg/proba.py -> build/lib/nearBragg 2024-02-17T16:29:33,949 copying nearBragg/nearBragg_doc.py -> build/lib/nearBragg 2024-02-17T16:29:33,950 copying nearBragg/nearBragg.py -> build/lib/nearBragg 2024-02-17T16:29:33,953 creating build/lib/scattering 2024-02-17T16:29:33,954 copying scattering/structure_factor.py -> build/lib/scattering 2024-02-17T16:29:33,956 copying scattering/__init__.py -> build/lib/scattering 2024-02-17T16:29:33,957 copying scattering/potential_misc.py -> build/lib/scattering 2024-02-17T16:29:33,959 copying scattering/splines.py -> build/lib/scattering 2024-02-17T16:29:33,960 copying scattering/potential.py -> build/lib/scattering 2024-02-17T16:29:33,962 copying scattering/cmpScattering.py -> build/lib/scattering 2024-02-17T16:29:33,963 copying scattering/scattering_factors.py -> build/lib/scattering 2024-02-17T16:29:33,966 creating build/lib/blochwave 2024-02-17T16:29:33,967 copying blochwave/util.py -> build/lib/blochwave 2024-02-17T16:29:33,969 copying blochwave/bloch.py -> build/lib/blochwave 2024-02-17T16:29:33,972 copying blochwave/bloch2D.py -> build/lib/blochwave 2024-02-17T16:29:33,974 copying blochwave/__init__.py -> build/lib/blochwave 2024-02-17T16:29:33,975 copying blochwave/bloch_pp.py -> build/lib/blochwave 2024-02-17T16:29:33,978 creating build/lib/wallpp 2024-02-17T16:29:33,979 copying wallpp/__init__.py -> build/lib/wallpp 2024-02-17T16:29:33,980 copying wallpp/config.py -> build/lib/wallpp 2024-02-17T16:29:33,982 copying wallpp/plane_group.py -> build/lib/wallpp 2024-02-17T16:29:33,985 copying wallpp/wallpaper.py -> build/lib/wallpp 2024-02-17T16:29:33,987 copying wallpp/space_group.py -> build/lib/wallpp 2024-02-17T16:29:33,989 copying wallpp/lattice.py -> build/lib/wallpp 2024-02-17T16:29:33,991 copying wallpp/gui.py -> build/lib/wallpp 2024-02-17T16:29:33,993 copying wallpp/nodesTri.py -> build/lib/wallpp 2024-02-17T16:29:33,995 creating build/lib/EDutils 2024-02-17T16:29:33,996 copying EDutils/import_ED.py -> build/lib/EDutils 2024-02-17T16:29:33,998 copying EDutils/__init__.py -> build/lib/EDutils 2024-02-17T16:29:34,000 copying EDutils/dyn_utils.py -> build/lib/EDutils 2024-02-17T16:29:34,002 copying EDutils/pets.py -> build/lib/EDutils 2024-02-17T16:29:34,005 copying EDutils/xds.py -> build/lib/EDutils 2024-02-17T16:29:34,007 copying EDutils/readers.py -> build/lib/EDutils 2024-02-17T16:29:34,009 copying EDutils/gui_config.py -> build/lib/EDutils 2024-02-17T16:29:34,011 copying EDutils/utilities.py -> build/lib/EDutils 2024-02-17T16:29:34,014 copying EDutils/dials_utils.py -> build/lib/EDutils 2024-02-17T16:29:34,016 copying EDutils/felix.py -> build/lib/EDutils 2024-02-17T16:29:34,018 copying EDutils/rotate_exp.py -> build/lib/EDutils 2024-02-17T16:29:34,021 copying EDutils/gui.py -> build/lib/EDutils 2024-02-17T16:29:34,024 copying EDutils/display.py -> build/lib/EDutils 2024-02-17T16:29:34,026 copying EDutils/viewers.py -> build/lib/EDutils 2024-02-17T16:29:34,028 running egg_info 2024-02-17T16:29:34,052 writing ccp4ED.egg-info/PKG-INFO 2024-02-17T16:29:34,056 writing dependency_links to ccp4ED.egg-info/dependency_links.txt 2024-02-17T16:29:34,058 writing requirements to ccp4ED.egg-info/requires.txt 2024-02-17T16:29:34,059 writing top-level names to ccp4ED.egg-info/top_level.txt 2024-02-17T16:29:34,093 reading manifest file 'ccp4ED.egg-info/SOURCES.txt' 2024-02-17T16:29:34,107 writing manifest file 'ccp4ED.egg-info/SOURCES.txt' 2024-02-17T16:29:34,110 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'EDutils.data' is absent from the `packages` configuration. 2024-02-17T16:29:34,110 !! 2024-02-17T16:29:34,111 ******************************************************************************** 2024-02-17T16:29:34,111 ############################ 2024-02-17T16:29:34,112 # Package would be ignored # 2024-02-17T16:29:34,112 ############################ 2024-02-17T16:29:34,113 Python recognizes 'EDutils.data' as an importable package[^1], 2024-02-17T16:29:34,113 but it is absent from setuptools' `packages` configuration. 2024-02-17T16:29:34,114 This leads to an ambiguous overall configuration. If you want to distribute this 2024-02-17T16:29:34,114 package, please make sure that 'EDutils.data' is explicitly added 2024-02-17T16:29:34,115 to the `packages` configuration field. 2024-02-17T16:29:34,116 Alternatively, you can also rely on setuptools' discovery methods 2024-02-17T16:29:34,116 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-02-17T16:29:34,117 instead of `find_packages(...)`/`find:`). 2024-02-17T16:29:34,117 You can read more about "package discovery" on setuptools documentation page: 2024-02-17T16:29:34,118 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-02-17T16:29:34,120 If you don't want 'EDutils.data' to be distributed and are 2024-02-17T16:29:34,120 already explicitly excluding 'EDutils.data' via 2024-02-17T16:29:34,120 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-02-17T16:29:34,121 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-02-17T16:29:34,122 combination with a more fine grained `package-data` configuration. 2024-02-17T16:29:34,123 You can read more about "package data files" on setuptools documentation page: 2024-02-17T16:29:34,124 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-02-17T16:29:34,126 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-02-17T16:29:34,126 even if it does not contain any `.py` files. 2024-02-17T16:29:34,127 On the other hand, currently there is no concept of package data 2024-02-17T16:29:34,128 directory, all directories are treated like packages. 2024-02-17T16:29:34,128 ******************************************************************************** 2024-02-17T16:29:34,130 !! 2024-02-17T16:29:34,130 check.warn(importable) 2024-02-17T16:29:34,131 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'EDutils.sandbox' is absent from the `packages` configuration. 2024-02-17T16:29:34,131 !! 2024-02-17T16:29:34,132 ******************************************************************************** 2024-02-17T16:29:34,133 ############################ 2024-02-17T16:29:34,133 # Package would be ignored # 2024-02-17T16:29:34,134 ############################ 2024-02-17T16:29:34,135 Python recognizes 'EDutils.sandbox' as an importable package[^1], 2024-02-17T16:29:34,135 but it is absent from setuptools' `packages` configuration. 2024-02-17T16:29:34,136 This leads to an ambiguous overall configuration. If you want to distribute this 2024-02-17T16:29:34,137 package, please make sure that 'EDutils.sandbox' is explicitly added 2024-02-17T16:29:34,137 to the `packages` configuration field. 2024-02-17T16:29:34,139 Alternatively, you can also rely on setuptools' discovery methods 2024-02-17T16:29:34,139 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-02-17T16:29:34,140 instead of `find_packages(...)`/`find:`). 2024-02-17T16:29:34,141 You can read more about "package discovery" on setuptools documentation page: 2024-02-17T16:29:34,142 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-02-17T16:29:34,143 If you don't want 'EDutils.sandbox' to be distributed and are 2024-02-17T16:29:34,144 already explicitly excluding 'EDutils.sandbox' via 2024-02-17T16:29:34,144 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-02-17T16:29:34,145 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-02-17T16:29:34,145 combination with a more fine grained `package-data` configuration. 2024-02-17T16:29:34,146 You can read more about "package data files" on setuptools documentation page: 2024-02-17T16:29:34,147 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-02-17T16:29:34,149 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-02-17T16:29:34,150 even if it does not contain any `.py` files. 2024-02-17T16:29:34,150 On the other hand, currently there is no concept of package data 2024-02-17T16:29:34,151 directory, all directories are treated like packages. 2024-02-17T16:29:34,151 ******************************************************************************** 2024-02-17T16:29:34,152 !! 2024-02-17T16:29:34,153 check.warn(importable) 2024-02-17T16:29:34,153 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multislice.data' is absent from the `packages` configuration. 2024-02-17T16:29:34,154 !! 2024-02-17T16:29:34,155 ******************************************************************************** 2024-02-17T16:29:34,156 ############################ 2024-02-17T16:29:34,156 # Package would be ignored # 2024-02-17T16:29:34,157 ############################ 2024-02-17T16:29:34,157 Python recognizes 'multislice.data' as an importable package[^1], 2024-02-17T16:29:34,158 but it is absent from setuptools' `packages` configuration. 2024-02-17T16:29:34,159 This leads to an ambiguous overall configuration. If you want to distribute this 2024-02-17T16:29:34,159 package, please make sure that 'multislice.data' is explicitly added 2024-02-17T16:29:34,160 to the `packages` configuration field. 2024-02-17T16:29:34,161 Alternatively, you can also rely on setuptools' discovery methods 2024-02-17T16:29:34,161 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-02-17T16:29:34,162 instead of `find_packages(...)`/`find:`). 2024-02-17T16:29:34,163 You can read more about "package discovery" on setuptools documentation page: 2024-02-17T16:29:34,164 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-02-17T16:29:34,165 If you don't want 'multislice.data' to be distributed and are 2024-02-17T16:29:34,166 already explicitly excluding 'multislice.data' via 2024-02-17T16:29:34,166 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-02-17T16:29:34,167 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-02-17T16:29:34,167 combination with a more fine grained `package-data` configuration. 2024-02-17T16:29:34,169 You can read more about "package data files" on setuptools documentation page: 2024-02-17T16:29:34,170 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-02-17T16:29:34,171 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-02-17T16:29:34,172 even if it does not contain any `.py` files. 2024-02-17T16:29:34,173 On the other hand, currently there is no concept of package data 2024-02-17T16:29:34,174 directory, all directories are treated like packages. 2024-02-17T16:29:34,174 ******************************************************************************** 2024-02-17T16:29:34,175 !! 2024-02-17T16:29:34,175 check.warn(importable) 2024-02-17T16:29:34,176 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multislice.examples' is absent from the `packages` configuration. 2024-02-17T16:29:34,176 !! 2024-02-17T16:29:34,177 ******************************************************************************** 2024-02-17T16:29:34,178 ############################ 2024-02-17T16:29:34,178 # Package would be ignored # 2024-02-17T16:29:34,178 ############################ 2024-02-17T16:29:34,179 Python recognizes 'multislice.examples' as an importable package[^1], 2024-02-17T16:29:34,179 but it is absent from setuptools' `packages` configuration. 2024-02-17T16:29:34,180 This leads to an ambiguous overall configuration. If you want to distribute this 2024-02-17T16:29:34,181 package, please make sure that 'multislice.examples' is explicitly added 2024-02-17T16:29:34,181 to the `packages` configuration field. 2024-02-17T16:29:34,182 Alternatively, you can also rely on setuptools' discovery methods 2024-02-17T16:29:34,183 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-02-17T16:29:34,183 instead of `find_packages(...)`/`find:`). 2024-02-17T16:29:34,184 You can read more about "package discovery" on setuptools documentation page: 2024-02-17T16:29:34,185 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-02-17T16:29:34,186 If you don't want 'multislice.examples' to be distributed and are 2024-02-17T16:29:34,187 already explicitly excluding 'multislice.examples' via 2024-02-17T16:29:34,187 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-02-17T16:29:34,188 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-02-17T16:29:34,188 combination with a more fine grained `package-data` configuration. 2024-02-17T16:29:34,189 You can read more about "package data files" on setuptools documentation page: 2024-02-17T16:29:34,190 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-02-17T16:29:34,192 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-02-17T16:29:34,193 even if it does not contain any `.py` files. 2024-02-17T16:29:34,193 On the other hand, currently there is no concept of package data 2024-02-17T16:29:34,194 directory, all directories are treated like packages. 2024-02-17T16:29:34,194 ******************************************************************************** 2024-02-17T16:29:34,196 !! 2024-02-17T16:29:34,196 check.warn(importable) 2024-02-17T16:29:34,197 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multislice.examples.dat' is absent from the `packages` configuration. 2024-02-17T16:29:34,197 !! 2024-02-17T16:29:34,198 ******************************************************************************** 2024-02-17T16:29:34,199 ############################ 2024-02-17T16:29:34,200 # Package would be ignored # 2024-02-17T16:29:34,200 ############################ 2024-02-17T16:29:34,201 Python recognizes 'multislice.examples.dat' as an importable package[^1], 2024-02-17T16:29:34,202 but it is absent from setuptools' `packages` configuration. 2024-02-17T16:29:34,205 This leads to an ambiguous overall configuration. If you want to distribute this 2024-02-17T16:29:34,207 package, please make sure that 'multislice.examples.dat' is explicitly added 2024-02-17T16:29:34,221 to the `packages` configuration field. 2024-02-17T16:29:34,224 Alternatively, you can also rely on setuptools' discovery methods 2024-02-17T16:29:34,225 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-02-17T16:29:34,225 instead of `find_packages(...)`/`find:`). 2024-02-17T16:29:34,226 You can read more about "package discovery" on setuptools documentation page: 2024-02-17T16:29:34,231 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-02-17T16:29:34,234 If you don't want 'multislice.examples.dat' to be distributed and are 2024-02-17T16:29:34,235 already explicitly excluding 'multislice.examples.dat' via 2024-02-17T16:29:34,236 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-02-17T16:29:34,236 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-02-17T16:29:34,237 combination with a more fine grained `package-data` configuration. 2024-02-17T16:29:34,238 You can read more about "package data files" on setuptools documentation page: 2024-02-17T16:29:34,239 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-02-17T16:29:34,240 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-02-17T16:29:34,240 even if it does not contain any `.py` files. 2024-02-17T16:29:34,241 On the other hand, currently there is no concept of package data 2024-02-17T16:29:34,241 directory, all directories are treated like packages. 2024-02-17T16:29:34,242 ******************************************************************************** 2024-02-17T16:29:34,243 !! 2024-02-17T16:29:34,244 check.warn(importable) 2024-02-17T16:29:34,244 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'multislice.temsim' is absent from the `packages` configuration. 2024-02-17T16:29:34,245 !! 2024-02-17T16:29:34,246 ******************************************************************************** 2024-02-17T16:29:34,250 ############################ 2024-02-17T16:29:34,251 # Package would be ignored # 2024-02-17T16:29:34,255 ############################ 2024-02-17T16:29:34,259 Python recognizes 'multislice.temsim' as an importable package[^1], 2024-02-17T16:29:34,263 but it is absent from setuptools' `packages` configuration. 2024-02-17T16:29:34,269 This leads to an ambiguous overall configuration. If you want to distribute this 2024-02-17T16:29:34,269 package, please make sure that 'multislice.temsim' is explicitly added 2024-02-17T16:29:34,270 to the `packages` configuration field. 2024-02-17T16:29:34,271 Alternatively, you can also rely on setuptools' discovery methods 2024-02-17T16:29:34,272 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-02-17T16:29:34,272 instead of `find_packages(...)`/`find:`). 2024-02-17T16:29:34,274 You can read more about "package discovery" on setuptools documentation page: 2024-02-17T16:29:34,275 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-02-17T16:29:34,276 If you don't want 'multislice.temsim' to be distributed and are 2024-02-17T16:29:34,276 already explicitly excluding 'multislice.temsim' via 2024-02-17T16:29:34,277 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-02-17T16:29:34,277 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-02-17T16:29:34,278 combination with a more fine grained `package-data` configuration. 2024-02-17T16:29:34,279 You can read more about "package data files" on setuptools documentation page: 2024-02-17T16:29:34,280 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-02-17T16:29:34,281 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-02-17T16:29:34,282 even if it does not contain any `.py` files. 2024-02-17T16:29:34,283 On the other hand, currently there is no concept of package data 2024-02-17T16:29:34,283 directory, all directories are treated like packages. 2024-02-17T16:29:34,283 ******************************************************************************** 2024-02-17T16:29:34,284 !! 2024-02-17T16:29:34,286 check.warn(importable) 2024-02-17T16:29:34,286 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'scattering.data' is absent from the `packages` configuration. 2024-02-17T16:29:34,286 !! 2024-02-17T16:29:34,287 ******************************************************************************** 2024-02-17T16:29:34,288 ############################ 2024-02-17T16:29:34,289 # Package would be ignored # 2024-02-17T16:29:34,289 ############################ 2024-02-17T16:29:34,289 Python recognizes 'scattering.data' as an importable package[^1], 2024-02-17T16:29:34,290 but it is absent from setuptools' `packages` configuration. 2024-02-17T16:29:34,291 This leads to an ambiguous overall configuration. If you want to distribute this 2024-02-17T16:29:34,292 package, please make sure that 'scattering.data' is explicitly added 2024-02-17T16:29:34,292 to the `packages` configuration field. 2024-02-17T16:29:34,294 Alternatively, you can also rely on setuptools' discovery methods 2024-02-17T16:29:34,294 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-02-17T16:29:34,295 instead of `find_packages(...)`/`find:`). 2024-02-17T16:29:34,296 You can read more about "package discovery" on setuptools documentation page: 2024-02-17T16:29:34,297 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-02-17T16:29:34,298 If you don't want 'scattering.data' to be distributed and are 2024-02-17T16:29:34,298 already explicitly excluding 'scattering.data' via 2024-02-17T16:29:34,299 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-02-17T16:29:34,299 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-02-17T16:29:34,300 combination with a more fine grained `package-data` configuration. 2024-02-17T16:29:34,301 You can read more about "package data files" on setuptools documentation page: 2024-02-17T16:29:34,302 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-02-17T16:29:34,303 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-02-17T16:29:34,304 even if it does not contain any `.py` files. 2024-02-17T16:29:34,304 On the other hand, currently there is no concept of package data 2024-02-17T16:29:34,305 directory, all directories are treated like packages. 2024-02-17T16:29:34,305 ******************************************************************************** 2024-02-17T16:29:34,306 !! 2024-02-17T16:29:34,307 check.warn(importable) 2024-02-17T16:29:34,307 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'wallpp.docs' is absent from the `packages` configuration. 2024-02-17T16:29:34,308 !! 2024-02-17T16:29:34,309 ******************************************************************************** 2024-02-17T16:29:34,309 ############################ 2024-02-17T16:29:34,310 # Package would be ignored # 2024-02-17T16:29:34,311 ############################ 2024-02-17T16:29:34,311 Python recognizes 'wallpp.docs' as an importable package[^1], 2024-02-17T16:29:34,312 but it is absent from setuptools' `packages` configuration. 2024-02-17T16:29:34,313 This leads to an ambiguous overall configuration. If you want to distribute this 2024-02-17T16:29:34,313 package, please make sure that 'wallpp.docs' is explicitly added 2024-02-17T16:29:34,314 to the `packages` configuration field. 2024-02-17T16:29:34,315 Alternatively, you can also rely on setuptools' discovery methods 2024-02-17T16:29:34,315 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-02-17T16:29:34,315 instead of `find_packages(...)`/`find:`). 2024-02-17T16:29:34,316 You can read more about "package discovery" on setuptools documentation page: 2024-02-17T16:29:34,317 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-02-17T16:29:34,318 If you don't want 'wallpp.docs' to be distributed and are 2024-02-17T16:29:34,318 already explicitly excluding 'wallpp.docs' via 2024-02-17T16:29:34,319 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-02-17T16:29:34,319 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-02-17T16:29:34,320 combination with a more fine grained `package-data` configuration. 2024-02-17T16:29:34,321 You can read more about "package data files" on setuptools documentation page: 2024-02-17T16:29:34,322 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-02-17T16:29:34,323 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-02-17T16:29:34,324 even if it does not contain any `.py` files. 2024-02-17T16:29:34,324 On the other hand, currently there is no concept of package data 2024-02-17T16:29:34,324 directory, all directories are treated like packages. 2024-02-17T16:29:34,325 ******************************************************************************** 2024-02-17T16:29:34,326 !! 2024-02-17T16:29:34,326 check.warn(importable) 2024-02-17T16:29:34,327 copying multislice/Makefile -> build/lib/multislice 2024-02-17T16:29:34,327 copying multislice/changelog.md -> build/lib/multislice 2024-02-17T16:29:34,328 copying multislice/convert_pets.sh -> build/lib/multislice 2024-02-17T16:29:34,328 creating build/lib/multislice/data 2024-02-17T16:29:34,329 copying multislice/data/splines.npy -> build/lib/multislice/data 2024-02-17T16:29:34,329 creating build/lib/multislice/examples 2024-02-17T16:29:34,330 copying multislice/examples/.adxv_beam_center -> build/lib/multislice/examples 2024-02-17T16:29:34,330 copying multislice/examples/Carbone_SC.py -> build/lib/multislice/examples 2024-02-17T16:29:34,331 copying multislice/examples/Li.py -> build/lib/multislice/examples 2024-02-17T16:29:34,331 copying multislice/examples/biotin_figs.py -> build/lib/multislice/examples 2024-02-17T16:29:34,332 copying multislice/examples/biotin_run.py -> build/lib/multislice/examples 2024-02-17T16:29:34,333 copying multislice/examples/epicza.py -> build/lib/multislice/examples 2024-02-17T16:29:34,333 copying multislice/examples/ireloh.py -> build/lib/multislice/examples 2024-02-17T16:29:34,334 copying multislice/examples/make_crystal.py -> build/lib/multislice/examples 2024-02-17T16:29:34,334 copying multislice/examples/npy2smv -> build/lib/multislice/examples 2024-02-17T16:29:34,335 copying multislice/examples/npy2smv.cpp -> build/lib/multislice/examples 2024-02-17T16:29:34,335 copying multislice/examples/paracetamol_run.py -> build/lib/multislice/examples 2024-02-17T16:29:34,336 copying multislice/examples/silicon_run.py -> build/lib/multislice/examples 2024-02-17T16:29:34,336 copying multislice/examples/test_base.py -> build/lib/multislice/examples 2024-02-17T16:29:34,337 copying multislice/examples/walltimes.py -> build/lib/multislice/examples 2024-02-17T16:29:34,337 creating build/lib/multislice/examples/dat 2024-02-17T16:29:34,338 copying multislice/examples/dat/C.txt -> build/lib/multislice/examples/dat 2024-02-17T16:29:34,338 copying multislice/examples/dat/H.txt -> build/lib/multislice/examples/dat 2024-02-17T16:29:34,339 copying multislice/examples/dat/O.txt -> build/lib/multislice/examples/dat 2024-02-17T16:29:34,339 copying multislice/examples/dat/P.txt -> build/lib/multislice/examples/dat 2024-02-17T16:29:34,340 copying multislice/examples/dat/S.txt -> build/lib/multislice/examples/dat 2024-02-17T16:29:34,340 copying multislice/examples/dat/biotin_m1.npy -> build/lib/multislice/examples/dat 2024-02-17T16:29:34,341 copying multislice/examples/dat/biotin_m1.smv -> build/lib/multislice/examples/dat 2024-02-17T16:29:34,341 copying multislice/examples/dat/biotin_m1.smv.npy -> build/lib/multislice/examples/dat 2024-02-17T16:29:34,342 copying multislice/examples/dat/test.mp4 -> build/lib/multislice/examples/dat 2024-02-17T16:29:34,342 copying multislice/examples/dat/test.npy -> build/lib/multislice/examples/dat 2024-02-17T16:29:34,342 copying multislice/examples/dat/test.smv -> build/lib/multislice/examples/dat 2024-02-17T16:29:34,343 copying multislice/examples/dat/test.xyz -> build/lib/multislice/examples/dat 2024-02-17T16:29:34,343 creating build/lib/multislice/temsim 2024-02-17T16:29:34,344 copying multislice/temsim/atompot.cpp -> build/lib/multislice/temsim 2024-02-17T16:29:34,344 copying multislice/temsim/autoslic.cpp -> build/lib/multislice/temsim 2024-02-17T16:29:34,344 copying multislice/temsim/autoslic.hpp -> build/lib/multislice/temsim 2024-02-17T16:29:34,345 copying multislice/temsim/autosliccmd.cpp -> build/lib/multislice/temsim 2024-02-17T16:29:34,345 copying multislice/temsim/autostem.cpp -> build/lib/multislice/temsim 2024-02-17T16:29:34,346 copying multislice/temsim/autostem.hpp -> build/lib/multislice/temsim 2024-02-17T16:29:34,346 copying multislice/temsim/autostemcmd.cpp -> build/lib/multislice/temsim 2024-02-17T16:29:34,347 copying multislice/temsim/cfpix.cpp -> build/lib/multislice/temsim 2024-02-17T16:29:34,347 copying multislice/temsim/cfpix.hpp -> build/lib/multislice/temsim 2024-02-17T16:29:34,348 copying multislice/temsim/floatTIFF.cpp -> build/lib/multislice/temsim 2024-02-17T16:29:34,348 copying multislice/temsim/floatTIFF.hpp -> build/lib/multislice/temsim 2024-02-17T16:29:34,349 copying multislice/temsim/image.cpp -> build/lib/multislice/temsim 2024-02-17T16:29:34,350 copying multislice/temsim/incostem.cpp -> build/lib/multislice/temsim 2024-02-17T16:29:34,350 copying multislice/temsim/incostem.hpp -> build/lib/multislice/temsim 2024-02-17T16:29:34,350 copying multislice/temsim/incostemcmd.cpp -> build/lib/multislice/temsim 2024-02-17T16:29:34,351 copying multislice/temsim/makefile -> build/lib/multislice/temsim 2024-02-17T16:29:34,352 copying multislice/temsim/mulslice.cpp -> build/lib/multislice/temsim 2024-02-17T16:29:34,352 copying multislice/temsim/probe.cpp -> build/lib/multislice/temsim 2024-02-17T16:29:34,353 copying multislice/temsim/probe.hpp -> build/lib/multislice/temsim 2024-02-17T16:29:34,353 copying multislice/temsim/probecmd.cpp -> build/lib/multislice/temsim 2024-02-17T16:29:34,354 copying multislice/temsim/run_temsim.sh -> build/lib/multislice/temsim 2024-02-17T16:29:34,354 copying multislice/temsim/slicelib.cpp -> build/lib/multislice/temsim 2024-02-17T16:29:34,355 copying multislice/temsim/slicelib.hpp -> build/lib/multislice/temsim 2024-02-17T16:29:34,355 copying multislice/temsim/slicelib_main.cpp -> build/lib/multislice/temsim 2024-02-17T16:29:34,357 copying multislice/temsim/stemslic.cpp -> build/lib/multislice/temsim 2024-02-17T16:29:34,360 copying multislice/temsim/sumpix.cpp -> build/lib/multislice/temsim 2024-02-17T16:29:34,363 copying nearBragg/Makefile -> build/lib/nearBragg 2024-02-17T16:29:34,364 copying nearBragg/nanobragg.c -> build/lib/nearBragg 2024-02-17T16:29:34,371 copying nearBragg/nearBragg.c -> build/lib/nearBragg 2024-02-17T16:29:34,374 creating build/lib/scattering/data 2024-02-17T16:29:34,375 copying scattering/data/ab_shelx.csv -> build/lib/scattering/data 2024-02-17T16:29:34,377 copying scattering/data/abcd.npy -> build/lib/scattering/data 2024-02-17T16:29:34,380 copying scattering/data/elec.pkl -> build/lib/scattering/data 2024-02-17T16:29:34,382 copying scattering/data/spline_1.txt -> build/lib/scattering/data 2024-02-17T16:29:34,384 copying scattering/data/spline_14.txt -> build/lib/scattering/data 2024-02-17T16:29:34,386 copying scattering/data/spline_16.txt -> build/lib/scattering/data 2024-02-17T16:29:34,389 copying scattering/data/spline_6.txt -> build/lib/scattering/data 2024-02-17T16:29:34,391 copying scattering/data/spline_7.txt -> build/lib/scattering/data 2024-02-17T16:29:34,393 copying scattering/data/spline_8.txt -> build/lib/scattering/data 2024-02-17T16:29:34,395 copying scattering/data/splines.npy -> build/lib/scattering/data 2024-02-17T16:29:34,400 copying scattering/data/xray.pkl -> build/lib/scattering/data 2024-02-17T16:29:34,403 copying blochwave/changelog.md -> build/lib/blochwave 2024-02-17T16:29:34,405 copying wallpp/mkdocs.yml -> build/lib/wallpp 2024-02-17T16:29:34,407 copying wallpp/space_groups.pkl -> build/lib/wallpp 2024-02-17T16:29:34,411 creating build/lib/wallpp/docs 2024-02-17T16:29:34,411 copying wallpp/docs/Wallpaper_Symmetry.html -> build/lib/wallpp/docs 2024-02-17T16:29:34,414 copying wallpp/docs/index.md -> build/lib/wallpp/docs 2024-02-17T16:29:34,416 copying wallpp/docs/mathjaxhelper.js -> build/lib/wallpp/docs 2024-02-17T16:29:34,418 copying wallpp/docs/mdx_math.py -> build/lib/wallpp/docs 2024-02-17T16:29:34,420 copying wallpp/docs/setup.py -> build/lib/wallpp/docs 2024-02-17T16:29:34,422 copying EDutils/changelog.md -> build/lib/EDutils 2024-02-17T16:29:34,424 copying EDutils/convert_pets.sh -> build/lib/EDutils 2024-02-17T16:29:34,426 copying EDutils/pets_ref.sh -> build/lib/EDutils 2024-02-17T16:29:34,427 creating build/lib/EDutils/data 2024-02-17T16:29:34,428 copying EDutils/data/viewer_df.pkl -> build/lib/EDutils/data 2024-02-17T16:29:34,430 copying EDutils/data/viewer_dict.pkl -> build/lib/EDutils/data 2024-02-17T16:29:34,432 creating build/lib/EDutils/sandbox 2024-02-17T16:29:34,433 copying EDutils/sandbox/convert.py -> build/lib/EDutils/sandbox 2024-02-17T16:29:34,435 copying EDutils/sandbox/test.py -> build/lib/EDutils/sandbox 2024-02-17T16:29:34,466 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-02-17T16:29:34,467 !! 2024-02-17T16:29:34,468 ******************************************************************************** 2024-02-17T16:29:34,468 Please avoid running ``setup.py`` directly. 2024-02-17T16:29:34,469 Instead, use pypa/build, pypa/installer or other 2024-02-17T16:29:34,469 standards-based tools. 2024-02-17T16:29:34,471 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-02-17T16:29:34,471 ******************************************************************************** 2024-02-17T16:29:34,472 !! 2024-02-17T16:29:34,473 self.initialize_options() 2024-02-17T16:29:34,493 installing to build/bdist.linux-armv7l/wheel 2024-02-17T16:29:34,494 running install 2024-02-17T16:29:34,518 running install_lib 2024-02-17T16:29:34,543 creating build/bdist.linux-armv7l 2024-02-17T16:29:34,544 creating build/bdist.linux-armv7l/wheel 2024-02-17T16:29:34,546 creating build/bdist.linux-armv7l/wheel/multislice 2024-02-17T16:29:34,547 copying build/lib/multislice/rotating_crystal.py -> build/bdist.linux-armv7l/wheel/multislice 2024-02-17T16:29:34,550 creating build/bdist.linux-armv7l/wheel/multislice/data 2024-02-17T16:29:34,551 copying build/lib/multislice/data/splines.npy -> build/bdist.linux-armv7l/wheel/multislice/data 2024-02-17T16:29:34,553 copying build/lib/multislice/__init__.py -> build/bdist.linux-armv7l/wheel/multislice 2024-02-17T16:29:34,555 copying build/lib/multislice/ED_base.py -> build/bdist.linux-armv7l/wheel/multislice 2024-02-17T16:29:34,557 creating build/bdist.linux-armv7l/wheel/multislice/temsim 2024-02-17T16:29:34,558 copying build/lib/multislice/temsim/incostemcmd.cpp -> build/bdist.linux-armv7l/wheel/multislice/temsim 2024-02-17T16:29:34,560 copying build/lib/multislice/temsim/autosliccmd.cpp -> build/bdist.linux-armv7l/wheel/multislice/temsim 2024-02-17T16:29:34,563 copying build/lib/multislice/temsim/sumpix.cpp -> build/bdist.linux-armv7l/wheel/multislice/temsim 2024-02-17T16:29:34,565 copying build/lib/multislice/temsim/probe.cpp -> build/bdist.linux-armv7l/wheel/multislice/temsim 2024-02-17T16:29:34,567 copying build/lib/multislice/temsim/slicelib_main.cpp -> build/bdist.linux-armv7l/wheel/multislice/temsim 2024-02-17T16:29:34,568 copying build/lib/multislice/temsim/cfpix.hpp -> build/bdist.linux-armv7l/wheel/multislice/temsim 2024-02-17T16:29:34,570 copying build/lib/multislice/temsim/autostemcmd.cpp -> build/bdist.linux-armv7l/wheel/multislice/temsim 2024-02-17T16:29:34,573 copying build/lib/multislice/temsim/probecmd.cpp -> build/bdist.linux-armv7l/wheel/multislice/temsim 2024-02-17T16:29:34,575 copying build/lib/multislice/temsim/autoslic.cpp -> build/bdist.linux-armv7l/wheel/multislice/temsim 2024-02-17T16:29:34,578 copying build/lib/multislice/temsim/autostem.cpp -> build/bdist.linux-armv7l/wheel/multislice/temsim 2024-02-17T16:29:34,581 copying build/lib/multislice/temsim/floatTIFF.cpp -> build/bdist.linux-armv7l/wheel/multislice/temsim 2024-02-17T16:29:34,584 copying build/lib/multislice/temsim/floatTIFF.hpp -> build/bdist.linux-armv7l/wheel/multislice/temsim 2024-02-17T16:29:34,586 copying build/lib/multislice/temsim/probe.hpp -> build/bdist.linux-armv7l/wheel/multislice/temsim 2024-02-17T16:29:34,587 copying build/lib/multislice/temsim/incostem.hpp -> build/bdist.linux-armv7l/wheel/multislice/temsim 2024-02-17T16:29:34,590 copying build/lib/multislice/temsim/mulslice.cpp -> build/bdist.linux-armv7l/wheel/multislice/temsim 2024-02-17T16:29:34,592 copying build/lib/multislice/temsim/makefile -> build/bdist.linux-armv7l/wheel/multislice/temsim 2024-02-17T16:29:34,594 copying build/lib/multislice/temsim/slicelib.cpp -> build/bdist.linux-armv7l/wheel/multislice/temsim 2024-02-17T16:29:34,597 copying build/lib/multislice/temsim/slicelib.hpp -> build/bdist.linux-armv7l/wheel/multislice/temsim 2024-02-17T16:29:34,600 copying build/lib/multislice/temsim/incostem.cpp -> build/bdist.linux-armv7l/wheel/multislice/temsim 2024-02-17T16:29:34,602 copying build/lib/multislice/temsim/autostem.hpp -> build/bdist.linux-armv7l/wheel/multislice/temsim 2024-02-17T16:29:34,604 copying build/lib/multislice/temsim/cfpix.cpp -> build/bdist.linux-armv7l/wheel/multislice/temsim 2024-02-17T16:29:34,607 copying build/lib/multislice/temsim/stemslic.cpp -> build/bdist.linux-armv7l/wheel/multislice/temsim 2024-02-17T16:29:34,609 copying build/lib/multislice/temsim/image.cpp -> build/bdist.linux-armv7l/wheel/multislice/temsim 2024-02-17T16:29:34,612 copying build/lib/multislice/temsim/autoslic.hpp -> build/bdist.linux-armv7l/wheel/multislice/temsim 2024-02-17T16:29:34,614 copying build/lib/multislice/temsim/atompot.cpp -> build/bdist.linux-armv7l/wheel/multislice/temsim 2024-02-17T16:29:34,616 copying build/lib/multislice/temsim/run_temsim.sh -> build/bdist.linux-armv7l/wheel/multislice/temsim 2024-02-17T16:29:34,618 copying build/lib/multislice/postprocess.py -> build/bdist.linux-armv7l/wheel/multislice 2024-02-17T16:29:34,620 copying build/lib/multislice/config.py -> build/bdist.linux-armv7l/wheel/multislice 2024-02-17T16:29:34,621 copying build/lib/multislice/pets.py -> build/bdist.linux-armv7l/wheel/multislice 2024-02-17T16:29:34,624 copying build/lib/multislice/Makefile -> build/bdist.linux-armv7l/wheel/multislice 2024-02-17T16:29:34,626 copying build/lib/multislice/convert_pets.sh -> build/bdist.linux-armv7l/wheel/multislice 2024-02-17T16:29:34,628 creating build/bdist.linux-armv7l/wheel/multislice/examples 2024-02-17T16:29:34,629 copying build/lib/multislice/examples/make_crystal.py -> build/bdist.linux-armv7l/wheel/multislice/examples 2024-02-17T16:29:34,631 copying build/lib/multislice/examples/Li.py -> build/bdist.linux-armv7l/wheel/multislice/examples 2024-02-17T16:29:34,632 copying build/lib/multislice/examples/paracetamol_run.py -> build/bdist.linux-armv7l/wheel/multislice/examples 2024-02-17T16:29:34,634 copying build/lib/multislice/examples/silicon_run.py -> build/bdist.linux-armv7l/wheel/multislice/examples 2024-02-17T16:29:34,636 copying build/lib/multislice/examples/Carbone_SC.py -> build/bdist.linux-armv7l/wheel/multislice/examples 2024-02-17T16:29:34,638 copying build/lib/multislice/examples/npy2smv -> build/bdist.linux-armv7l/wheel/multislice/examples 2024-02-17T16:29:34,640 copying build/lib/multislice/examples/.adxv_beam_center -> build/bdist.linux-armv7l/wheel/multislice/examples 2024-02-17T16:29:34,642 copying build/lib/multislice/examples/npy2smv.cpp -> build/bdist.linux-armv7l/wheel/multislice/examples 2024-02-17T16:29:34,643 copying build/lib/multislice/examples/biotin_figs.py -> build/bdist.linux-armv7l/wheel/multislice/examples 2024-02-17T16:29:34,645 copying build/lib/multislice/examples/test_base.py -> build/bdist.linux-armv7l/wheel/multislice/examples 2024-02-17T16:29:34,647 creating build/bdist.linux-armv7l/wheel/multislice/examples/dat 2024-02-17T16:29:34,648 copying build/lib/multislice/examples/dat/test.mp4 -> build/bdist.linux-armv7l/wheel/multislice/examples/dat 2024-02-17T16:29:34,651 copying build/lib/multislice/examples/dat/biotin_m1.npy -> build/bdist.linux-armv7l/wheel/multislice/examples/dat 2024-02-17T16:29:34,683 copying build/lib/multislice/examples/dat/test.npy -> build/bdist.linux-armv7l/wheel/multislice/examples/dat 2024-02-17T16:29:34,685 copying build/lib/multislice/examples/dat/test.smv -> build/bdist.linux-armv7l/wheel/multislice/examples/dat 2024-02-17T16:29:34,687 copying build/lib/multislice/examples/dat/S.txt -> build/bdist.linux-armv7l/wheel/multislice/examples/dat 2024-02-17T16:29:34,689 copying build/lib/multislice/examples/dat/C.txt -> build/bdist.linux-armv7l/wheel/multislice/examples/dat 2024-02-17T16:29:34,691 copying build/lib/multislice/examples/dat/test.xyz -> build/bdist.linux-armv7l/wheel/multislice/examples/dat 2024-02-17T16:29:34,693 copying build/lib/multislice/examples/dat/P.txt -> build/bdist.linux-armv7l/wheel/multislice/examples/dat 2024-02-17T16:29:34,695 copying build/lib/multislice/examples/dat/biotin_m1.smv -> build/bdist.linux-armv7l/wheel/multislice/examples/dat 2024-02-17T16:29:34,704 copying build/lib/multislice/examples/dat/biotin_m1.smv.npy -> build/bdist.linux-armv7l/wheel/multislice/examples/dat 2024-02-17T16:29:34,771 copying build/lib/multislice/examples/dat/O.txt -> build/bdist.linux-armv7l/wheel/multislice/examples/dat 2024-02-17T16:29:34,773 copying build/lib/multislice/examples/dat/H.txt -> build/bdist.linux-armv7l/wheel/multislice/examples/dat 2024-02-17T16:29:34,775 copying build/lib/multislice/examples/epicza.py -> build/bdist.linux-armv7l/wheel/multislice/examples 2024-02-17T16:29:34,777 copying build/lib/multislice/examples/ireloh.py -> build/bdist.linux-armv7l/wheel/multislice/examples 2024-02-17T16:29:34,779 copying build/lib/multislice/examples/walltimes.py -> build/bdist.linux-armv7l/wheel/multislice/examples 2024-02-17T16:29:34,781 copying build/lib/multislice/examples/biotin_run.py -> build/bdist.linux-armv7l/wheel/multislice/examples 2024-02-17T16:29:34,783 copying build/lib/multislice/changelog.md -> build/bdist.linux-armv7l/wheel/multislice 2024-02-17T16:29:34,785 copying build/lib/multislice/interaction_parameter.py -> build/bdist.linux-armv7l/wheel/multislice 2024-02-17T16:29:34,786 copying build/lib/multislice/multi_2D.py -> build/bdist.linux-armv7l/wheel/multislice 2024-02-17T16:29:34,789 copying build/lib/multislice/multi_3D.py -> build/bdist.linux-armv7l/wheel/multislice 2024-02-17T16:29:34,791 copying build/lib/multislice/import.py -> build/bdist.linux-armv7l/wheel/multislice 2024-02-17T16:29:34,793 copying build/lib/multislice/pymultislice.py -> build/bdist.linux-armv7l/wheel/multislice 2024-02-17T16:29:34,795 copying build/lib/multislice/multislice.py -> build/bdist.linux-armv7l/wheel/multislice 2024-02-17T16:29:34,797 copying build/lib/multislice/mupy_utils.py -> build/bdist.linux-armv7l/wheel/multislice 2024-02-17T16:29:34,801 creating build/bdist.linux-armv7l/wheel/nearBragg 2024-02-17T16:29:34,801 copying build/lib/nearBragg/nanobragg.c -> build/bdist.linux-armv7l/wheel/nearBragg 2024-02-17T16:29:34,806 copying build/lib/nearBragg/__init__.py -> build/bdist.linux-armv7l/wheel/nearBragg 2024-02-17T16:29:34,807 copying build/lib/nearBragg/Makefile -> build/bdist.linux-armv7l/wheel/nearBragg 2024-02-17T16:29:34,809 copying build/lib/nearBragg/nearBragg.c -> build/bdist.linux-armv7l/wheel/nearBragg 2024-02-17T16:29:34,812 copying build/lib/nearBragg/proba.py -> build/bdist.linux-armv7l/wheel/nearBragg 2024-02-17T16:29:34,814 copying build/lib/nearBragg/nearBragg_doc.py -> build/bdist.linux-armv7l/wheel/nearBragg 2024-02-17T16:29:34,815 copying build/lib/nearBragg/nearBragg.py -> build/bdist.linux-armv7l/wheel/nearBragg 2024-02-17T16:29:34,818 creating build/bdist.linux-armv7l/wheel/scattering 2024-02-17T16:29:34,819 copying build/lib/scattering/structure_factor.py -> build/bdist.linux-armv7l/wheel/scattering 2024-02-17T16:29:34,822 creating build/bdist.linux-armv7l/wheel/scattering/data 2024-02-17T16:29:34,822 copying build/lib/scattering/data/spline_1.txt -> build/bdist.linux-armv7l/wheel/scattering/data 2024-02-17T16:29:34,825 copying build/lib/scattering/data/ab_shelx.csv -> build/bdist.linux-armv7l/wheel/scattering/data 2024-02-17T16:29:34,827 copying build/lib/scattering/data/spline_7.txt -> build/bdist.linux-armv7l/wheel/scattering/data 2024-02-17T16:29:34,829 copying build/lib/scattering/data/elec.pkl -> build/bdist.linux-armv7l/wheel/scattering/data 2024-02-17T16:29:34,831 copying build/lib/scattering/data/spline_6.txt -> build/bdist.linux-armv7l/wheel/scattering/data 2024-02-17T16:29:34,833 copying build/lib/scattering/data/spline_14.txt -> build/bdist.linux-armv7l/wheel/scattering/data 2024-02-17T16:29:34,835 copying build/lib/scattering/data/splines.npy -> build/bdist.linux-armv7l/wheel/scattering/data 2024-02-17T16:29:34,838 copying build/lib/scattering/data/xray.pkl -> build/bdist.linux-armv7l/wheel/scattering/data 2024-02-17T16:29:34,840 copying build/lib/scattering/data/abcd.npy -> build/bdist.linux-armv7l/wheel/scattering/data 2024-02-17T16:29:34,842 copying build/lib/scattering/data/spline_16.txt -> build/bdist.linux-armv7l/wheel/scattering/data 2024-02-17T16:29:34,844 copying build/lib/scattering/data/spline_8.txt -> build/bdist.linux-armv7l/wheel/scattering/data 2024-02-17T16:29:34,847 copying build/lib/scattering/__init__.py -> build/bdist.linux-armv7l/wheel/scattering 2024-02-17T16:29:34,848 copying build/lib/scattering/potential_misc.py -> build/bdist.linux-armv7l/wheel/scattering 2024-02-17T16:29:34,850 copying build/lib/scattering/splines.py -> build/bdist.linux-armv7l/wheel/scattering 2024-02-17T16:29:34,851 copying build/lib/scattering/potential.py -> build/bdist.linux-armv7l/wheel/scattering 2024-02-17T16:29:34,853 copying build/lib/scattering/cmpScattering.py -> build/bdist.linux-armv7l/wheel/scattering 2024-02-17T16:29:34,855 copying build/lib/scattering/scattering_factors.py -> build/bdist.linux-armv7l/wheel/scattering 2024-02-17T16:29:34,858 creating build/bdist.linux-armv7l/wheel/blochwave 2024-02-17T16:29:34,859 copying build/lib/blochwave/util.py -> build/bdist.linux-armv7l/wheel/blochwave 2024-02-17T16:29:34,862 copying build/lib/blochwave/bloch.py -> build/bdist.linux-armv7l/wheel/blochwave 2024-02-17T16:29:34,866 copying build/lib/blochwave/bloch2D.py -> build/bdist.linux-armv7l/wheel/blochwave 2024-02-17T16:29:34,869 copying build/lib/blochwave/__init__.py -> build/bdist.linux-armv7l/wheel/blochwave 2024-02-17T16:29:34,872 copying build/lib/blochwave/changelog.md -> build/bdist.linux-armv7l/wheel/blochwave 2024-02-17T16:29:34,874 copying build/lib/blochwave/bloch_pp.py -> build/bdist.linux-armv7l/wheel/blochwave 2024-02-17T16:29:34,878 creating build/bdist.linux-armv7l/wheel/wallpp 2024-02-17T16:29:34,880 copying build/lib/wallpp/__init__.py -> build/bdist.linux-armv7l/wheel/wallpp 2024-02-17T16:29:34,883 copying build/lib/wallpp/mkdocs.yml -> build/bdist.linux-armv7l/wheel/wallpp 2024-02-17T16:29:34,886 copying build/lib/wallpp/config.py -> build/bdist.linux-armv7l/wheel/wallpp 2024-02-17T16:29:34,889 copying build/lib/wallpp/plane_group.py -> build/bdist.linux-armv7l/wheel/wallpp 2024-02-17T16:29:34,892 copying build/lib/wallpp/wallpaper.py -> build/bdist.linux-armv7l/wheel/wallpp 2024-02-17T16:29:34,896 creating build/bdist.linux-armv7l/wheel/wallpp/docs 2024-02-17T16:29:34,897 copying build/lib/wallpp/docs/mdx_math.py -> build/bdist.linux-armv7l/wheel/wallpp/docs 2024-02-17T16:29:34,900 copying build/lib/wallpp/docs/Wallpaper_Symmetry.html -> build/bdist.linux-armv7l/wheel/wallpp/docs 2024-02-17T16:29:34,904 copying build/lib/wallpp/docs/mathjaxhelper.js -> build/bdist.linux-armv7l/wheel/wallpp/docs 2024-02-17T16:29:34,907 copying build/lib/wallpp/docs/index.md -> build/bdist.linux-armv7l/wheel/wallpp/docs 2024-02-17T16:29:34,910 copying build/lib/wallpp/docs/setup.py -> build/bdist.linux-armv7l/wheel/wallpp/docs 2024-02-17T16:29:34,912 copying build/lib/wallpp/space_group.py -> build/bdist.linux-armv7l/wheel/wallpp 2024-02-17T16:29:34,915 copying build/lib/wallpp/lattice.py -> build/bdist.linux-armv7l/wheel/wallpp 2024-02-17T16:29:34,919 copying build/lib/wallpp/gui.py -> build/bdist.linux-armv7l/wheel/wallpp 2024-02-17T16:29:34,922 copying build/lib/wallpp/space_groups.pkl -> build/bdist.linux-armv7l/wheel/wallpp 2024-02-17T16:29:34,929 copying build/lib/wallpp/nodesTri.py -> build/bdist.linux-armv7l/wheel/wallpp 2024-02-17T16:29:34,933 creating build/bdist.linux-armv7l/wheel/EDutils 2024-02-17T16:29:34,935 creating build/bdist.linux-armv7l/wheel/EDutils/data 2024-02-17T16:29:34,938 copying build/lib/EDutils/data/viewer_dict.pkl -> build/bdist.linux-armv7l/wheel/EDutils/data 2024-02-17T16:29:34,941 copying build/lib/EDutils/data/viewer_df.pkl -> build/bdist.linux-armv7l/wheel/EDutils/data 2024-02-17T16:29:34,944 copying build/lib/EDutils/import_ED.py -> build/bdist.linux-armv7l/wheel/EDutils 2024-02-17T16:29:34,947 copying build/lib/EDutils/__init__.py -> build/bdist.linux-armv7l/wheel/EDutils 2024-02-17T16:29:34,950 copying build/lib/EDutils/dyn_utils.py -> build/bdist.linux-armv7l/wheel/EDutils 2024-02-17T16:29:34,953 copying build/lib/EDutils/pets.py -> build/bdist.linux-armv7l/wheel/EDutils 2024-02-17T16:29:34,958 copying build/lib/EDutils/convert_pets.sh -> build/bdist.linux-armv7l/wheel/EDutils 2024-02-17T16:29:34,960 copying build/lib/EDutils/xds.py -> build/bdist.linux-armv7l/wheel/EDutils 2024-02-17T16:29:34,962 copying build/lib/EDutils/changelog.md -> build/bdist.linux-armv7l/wheel/EDutils 2024-02-17T16:29:34,964 copying build/lib/EDutils/readers.py -> build/bdist.linux-armv7l/wheel/EDutils 2024-02-17T16:29:34,967 copying build/lib/EDutils/gui_config.py -> build/bdist.linux-armv7l/wheel/EDutils 2024-02-17T16:29:34,969 copying build/lib/EDutils/utilities.py -> build/bdist.linux-armv7l/wheel/EDutils 2024-02-17T16:29:34,972 copying build/lib/EDutils/dials_utils.py -> build/bdist.linux-armv7l/wheel/EDutils 2024-02-17T16:29:34,975 copying build/lib/EDutils/felix.py -> build/bdist.linux-armv7l/wheel/EDutils 2024-02-17T16:29:34,977 copying build/lib/EDutils/rotate_exp.py -> build/bdist.linux-armv7l/wheel/EDutils 2024-02-17T16:29:34,980 copying build/lib/EDutils/gui.py -> build/bdist.linux-armv7l/wheel/EDutils 2024-02-17T16:29:34,983 copying build/lib/EDutils/display.py -> build/bdist.linux-armv7l/wheel/EDutils 2024-02-17T16:29:34,986 copying build/lib/EDutils/viewers.py -> build/bdist.linux-armv7l/wheel/EDutils 2024-02-17T16:29:34,989 creating build/bdist.linux-armv7l/wheel/EDutils/sandbox 2024-02-17T16:29:34,991 copying build/lib/EDutils/sandbox/convert.py -> build/bdist.linux-armv7l/wheel/EDutils/sandbox 2024-02-17T16:29:34,993 copying build/lib/EDutils/sandbox/test.py -> build/bdist.linux-armv7l/wheel/EDutils/sandbox 2024-02-17T16:29:34,995 copying build/lib/EDutils/pets_ref.sh -> build/bdist.linux-armv7l/wheel/EDutils 2024-02-17T16:29:34,996 running install_egg_info 2024-02-17T16:29:35,027 Copying ccp4ED.egg-info to build/bdist.linux-armv7l/wheel/ccp4ED-1.3-py3.11.egg-info 2024-02-17T16:29:35,037 running install_scripts 2024-02-17T16:29:35,051 creating build/bdist.linux-armv7l/wheel/ccp4ED-1.3.dist-info/WHEEL 2024-02-17T16:29:35,053 creating '/tmp/pip-wheel-1zzybnj3/ccp4ED-1.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-02-17T16:29:35,056 adding 'EDutils/__init__.py' 2024-02-17T16:29:35,058 adding 'EDutils/changelog.md' 2024-02-17T16:29:35,059 adding 'EDutils/convert_pets.sh' 2024-02-17T16:29:35,062 adding 'EDutils/dials_utils.py' 2024-02-17T16:29:35,064 adding 'EDutils/display.py' 2024-02-17T16:29:35,066 adding 'EDutils/dyn_utils.py' 2024-02-17T16:29:35,069 adding 'EDutils/felix.py' 2024-02-17T16:29:35,075 adding 'EDutils/gui.py' 2024-02-17T16:29:35,077 adding 'EDutils/gui_config.py' 2024-02-17T16:29:35,079 adding 'EDutils/import_ED.py' 2024-02-17T16:29:35,085 adding 'EDutils/pets.py' 2024-02-17T16:29:35,087 adding 'EDutils/pets_ref.sh' 2024-02-17T16:29:35,088 adding 'EDutils/readers.py' 2024-02-17T16:29:35,092 adding 'EDutils/rotate_exp.py' 2024-02-17T16:29:35,096 adding 'EDutils/utilities.py' 2024-02-17T16:29:35,099 adding 'EDutils/viewers.py' 2024-02-17T16:29:35,101 adding 'EDutils/xds.py' 2024-02-17T16:29:35,103 adding 'EDutils/data/viewer_df.pkl' 2024-02-17T16:29:35,105 adding 'EDutils/data/viewer_dict.pkl' 2024-02-17T16:29:35,107 adding 'EDutils/sandbox/convert.py' 2024-02-17T16:29:35,109 adding 'EDutils/sandbox/test.py' 2024-02-17T16:29:35,111 adding 'blochwave/__init__.py' 2024-02-17T16:29:35,117 adding 'blochwave/bloch.py' 2024-02-17T16:29:35,120 adding 'blochwave/bloch2D.py' 2024-02-17T16:29:35,122 adding 'blochwave/bloch_pp.py' 2024-02-17T16:29:35,124 adding 'blochwave/changelog.md' 2024-02-17T16:29:35,126 adding 'blochwave/util.py' 2024-02-17T16:29:35,129 adding 'multislice/ED_base.py' 2024-02-17T16:29:35,131 adding 'multislice/Makefile' 2024-02-17T16:29:35,132 adding 'multislice/__init__.py' 2024-02-17T16:29:35,134 adding 'multislice/changelog.md' 2024-02-17T16:29:35,135 adding 'multislice/config.py' 2024-02-17T16:29:35,137 adding 'multislice/convert_pets.sh' 2024-02-17T16:29:35,139 adding 'multislice/import.py' 2024-02-17T16:29:35,140 adding 'multislice/interaction_parameter.py' 2024-02-17T16:29:35,143 adding 'multislice/multi_2D.py' 2024-02-17T16:29:35,146 adding 'multislice/multi_3D.py' 2024-02-17T16:29:35,153 adding 'multislice/multislice.py' 2024-02-17T16:29:35,159 adding 'multislice/mupy_utils.py' 2024-02-17T16:29:35,163 adding 'multislice/pets.py' 2024-02-17T16:29:35,165 adding 'multislice/postprocess.py' 2024-02-17T16:29:35,167 adding 'multislice/pymultislice.py' 2024-02-17T16:29:35,170 adding 'multislice/rotating_crystal.py' 2024-02-17T16:29:35,174 adding 'multislice/data/splines.npy' 2024-02-17T16:29:35,177 adding 'multislice/examples/.adxv_beam_center' 2024-02-17T16:29:35,178 adding 'multislice/examples/Carbone_SC.py' 2024-02-17T16:29:35,180 adding 'multislice/examples/Li.py' 2024-02-17T16:29:35,182 adding 'multislice/examples/biotin_figs.py' 2024-02-17T16:29:35,183 adding 'multislice/examples/biotin_run.py' 2024-02-17T16:29:35,184 adding 'multislice/examples/epicza.py' 2024-02-17T16:29:35,186 adding 'multislice/examples/ireloh.py' 2024-02-17T16:29:35,188 adding 'multislice/examples/make_crystal.py' 2024-02-17T16:29:35,191 adding 'multislice/examples/npy2smv' 2024-02-17T16:29:35,193 adding 'multislice/examples/npy2smv.cpp' 2024-02-17T16:29:35,195 adding 'multislice/examples/paracetamol_run.py' 2024-02-17T16:29:35,196 adding 'multislice/examples/silicon_run.py' 2024-02-17T16:29:35,198 adding 'multislice/examples/test_base.py' 2024-02-17T16:29:35,199 adding 'multislice/examples/walltimes.py' 2024-02-17T16:29:35,201 adding 'multislice/examples/dat/C.txt' 2024-02-17T16:29:35,202 adding 'multislice/examples/dat/H.txt' 2024-02-17T16:29:35,203 adding 'multislice/examples/dat/O.txt' 2024-02-17T16:29:35,204 adding 'multislice/examples/dat/P.txt' 2024-02-17T16:29:35,206 adding 'multislice/examples/dat/S.txt' 2024-02-17T16:29:35,250 adding 'multislice/examples/dat/biotin_m1.npy' 2024-02-17T16:29:35,274 adding 'multislice/examples/dat/biotin_m1.smv' 2024-02-17T16:29:35,321 adding 'multislice/examples/dat/biotin_m1.smv.npy' 2024-02-17T16:29:35,337 adding 'multislice/examples/dat/test.mp4' 2024-02-17T16:29:35,338 adding 'multislice/examples/dat/test.npy' 2024-02-17T16:29:35,339 adding 'multislice/examples/dat/test.smv' 2024-02-17T16:29:35,340 adding 'multislice/examples/dat/test.xyz' 2024-02-17T16:29:35,344 adding 'multislice/temsim/atompot.cpp' 2024-02-17T16:29:35,349 adding 'multislice/temsim/autoslic.cpp' 2024-02-17T16:29:35,351 adding 'multislice/temsim/autoslic.hpp' 2024-02-17T16:29:35,354 adding 'multislice/temsim/autosliccmd.cpp' 2024-02-17T16:29:35,361 adding 'multislice/temsim/autostem.cpp' 2024-02-17T16:29:35,363 adding 'multislice/temsim/autostem.hpp' 2024-02-17T16:29:35,367 adding 'multislice/temsim/autostemcmd.cpp' 2024-02-17T16:29:35,369 adding 'multislice/temsim/cfpix.cpp' 2024-02-17T16:29:35,371 adding 'multislice/temsim/cfpix.hpp' 2024-02-17T16:29:35,377 adding 'multislice/temsim/floatTIFF.cpp' 2024-02-17T16:29:35,380 adding 'multislice/temsim/floatTIFF.hpp' 2024-02-17T16:29:35,384 adding 'multislice/temsim/image.cpp' 2024-02-17T16:29:35,387 adding 'multislice/temsim/incostem.cpp' 2024-02-17T16:29:35,389 adding 'multislice/temsim/incostem.hpp' 2024-02-17T16:29:35,391 adding 'multislice/temsim/incostemcmd.cpp' 2024-02-17T16:29:35,392 adding 'multislice/temsim/makefile' 2024-02-17T16:29:35,396 adding 'multislice/temsim/mulslice.cpp' 2024-02-17T16:29:35,398 adding 'multislice/temsim/probe.cpp' 2024-02-17T16:29:35,399 adding 'multislice/temsim/probe.hpp' 2024-02-17T16:29:35,401 adding 'multislice/temsim/probecmd.cpp' 2024-02-17T16:29:35,402 adding 'multislice/temsim/run_temsim.sh' 2024-02-17T16:29:35,414 adding 'multislice/temsim/slicelib.cpp' 2024-02-17T16:29:35,419 adding 'multislice/temsim/slicelib.hpp' 2024-02-17T16:29:35,420 adding 'multislice/temsim/slicelib_main.cpp' 2024-02-17T16:29:35,424 adding 'multislice/temsim/stemslic.cpp' 2024-02-17T16:29:35,427 adding 'multislice/temsim/sumpix.cpp' 2024-02-17T16:29:35,428 adding 'nearBragg/Makefile' 2024-02-17T16:29:35,429 adding 'nearBragg/__init__.py' 2024-02-17T16:29:35,445 adding 'nearBragg/nanobragg.c' 2024-02-17T16:29:35,451 adding 'nearBragg/nearBragg.c' 2024-02-17T16:29:35,453 adding 'nearBragg/nearBragg.py' 2024-02-17T16:29:35,455 adding 'nearBragg/nearBragg_doc.py' 2024-02-17T16:29:35,456 adding 'nearBragg/proba.py' 2024-02-17T16:29:35,458 adding 'scattering/__init__.py' 2024-02-17T16:29:35,459 adding 'scattering/cmpScattering.py' 2024-02-17T16:29:35,460 adding 'scattering/potential.py' 2024-02-17T16:29:35,462 adding 'scattering/potential_misc.py' 2024-02-17T16:29:35,463 adding 'scattering/scattering_factors.py' 2024-02-17T16:29:35,464 adding 'scattering/splines.py' 2024-02-17T16:29:35,466 adding 'scattering/structure_factor.py' 2024-02-17T16:29:35,470 adding 'scattering/data/ab_shelx.csv' 2024-02-17T16:29:35,472 adding 'scattering/data/abcd.npy' 2024-02-17T16:29:35,475 adding 'scattering/data/elec.pkl' 2024-02-17T16:29:35,477 adding 'scattering/data/spline_1.txt' 2024-02-17T16:29:35,479 adding 'scattering/data/spline_14.txt' 2024-02-17T16:29:35,480 adding 'scattering/data/spline_16.txt' 2024-02-17T16:29:35,482 adding 'scattering/data/spline_6.txt' 2024-02-17T16:29:35,483 adding 'scattering/data/spline_7.txt' 2024-02-17T16:29:35,485 adding 'scattering/data/spline_8.txt' 2024-02-17T16:29:35,488 adding 'scattering/data/splines.npy' 2024-02-17T16:29:35,493 adding 'scattering/data/xray.pkl' 2024-02-17T16:29:35,495 adding 'wallpp/__init__.py' 2024-02-17T16:29:35,496 adding 'wallpp/config.py' 2024-02-17T16:29:35,498 adding 'wallpp/gui.py' 2024-02-17T16:29:35,499 adding 'wallpp/lattice.py' 2024-02-17T16:29:35,501 adding 'wallpp/mkdocs.yml' 2024-02-17T16:29:35,502 adding 'wallpp/nodesTri.py' 2024-02-17T16:29:35,504 adding 'wallpp/plane_group.py' 2024-02-17T16:29:35,505 adding 'wallpp/space_group.py' 2024-02-17T16:29:35,511 adding 'wallpp/space_groups.pkl' 2024-02-17T16:29:35,513 adding 'wallpp/wallpaper.py' 2024-02-17T16:29:35,517 adding 'wallpp/docs/Wallpaper_Symmetry.html' 2024-02-17T16:29:35,518 adding 'wallpp/docs/index.md' 2024-02-17T16:29:35,519 adding 'wallpp/docs/mathjaxhelper.js' 2024-02-17T16:29:35,520 adding 'wallpp/docs/mdx_math.py' 2024-02-17T16:29:35,522 adding 'wallpp/docs/setup.py' 2024-02-17T16:29:35,523 adding 'ccp4ED-1.3.dist-info/METADATA' 2024-02-17T16:29:35,524 adding 'ccp4ED-1.3.dist-info/WHEEL' 2024-02-17T16:29:35,525 adding 'ccp4ED-1.3.dist-info/top_level.txt' 2024-02-17T16:29:35,527 adding 'ccp4ED-1.3.dist-info/RECORD' 2024-02-17T16:29:35,537 removing build/bdist.linux-armv7l/wheel 2024-02-17T16:29:35,673 Building wheel for ccp4ed (setup.py): finished with status 'done' 2024-02-17T16:29:35,681 Created wheel for ccp4ed: filename=ccp4ED-1.3-py3-none-any.whl size=585047 sha256=109eb85b5cf954df38c5cefe21c4df7dbafad151132fe52984077235841b4e5e 2024-02-17T16:29:35,682 Stored in directory: /tmp/pip-ephem-wheel-cache-podnexd7/wheels/78/21/8a/d1859a7402c8b758bbcc5b1be61b169a3be2c290936a37eb5b 2024-02-17T16:29:35,696 Successfully built ccp4ed 2024-02-17T16:29:35,712 Removed build tracker: '/tmp/pip-build-tracker-3jzawj39'