2024-02-23T12:14:35,179 Created temporary directory: /tmp/pip-build-tracker-qr68ephg 2024-02-23T12:14:35,180 Initialized build tracking at /tmp/pip-build-tracker-qr68ephg 2024-02-23T12:14:35,181 Created build tracker: /tmp/pip-build-tracker-qr68ephg 2024-02-23T12:14:35,181 Entered build tracker: /tmp/pip-build-tracker-qr68ephg 2024-02-23T12:14:35,182 Created temporary directory: /tmp/pip-wheel-t3s44cut 2024-02-23T12:14:35,185 Created temporary directory: /tmp/pip-ephem-wheel-cache-ewwkthbb 2024-02-23T12:14:35,207 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-02-23T12:14:35,210 2 location(s) to search for versions of ampal: 2024-02-23T12:14:35,210 * https://pypi.org/simple/ampal/ 2024-02-23T12:14:35,210 * https://www.piwheels.org/simple/ampal/ 2024-02-23T12:14:35,211 Fetching project page and analyzing links: https://pypi.org/simple/ampal/ 2024-02-23T12:14:35,212 Getting page https://pypi.org/simple/ampal/ 2024-02-23T12:14:35,213 Found index url https://pypi.org/simple/ 2024-02-23T12:14:35,427 Fetched page https://pypi.org/simple/ampal/ as application/vnd.pypi.simple.v1+json 2024-02-23T12:14:35,430 Found link https://files.pythonhosted.org/packages/3f/e5/03da3a77bba138c165451d3f8efb7fd32818aea4a6212b420c558e9088d8/AMPAL-1.0.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.0.0 2024-02-23T12:14:35,431 Found link https://files.pythonhosted.org/packages/c2/90/2aecb8bdeab8de4f896f38fc792b434292f0f96a86cd3b860c849f4cfd55/AMPAL-1.0.1.tar.gz (from https://pypi.org/simple/ampal/), version: 1.0.1 2024-02-23T12:14:35,431 Found link https://files.pythonhosted.org/packages/29/39/ac32680ba515731a81942c3a1bb8d0731fc0da02185885794ccf51dd604b/AMPAL-1.1.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.1.0 2024-02-23T12:14:35,432 Found link https://files.pythonhosted.org/packages/f4/11/85ef80392ed433f9024abc0bacc2173dd88ce0e7c42f23b804cc3650b1e5/AMPAL-1.2.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.2.0 2024-02-23T12:14:35,433 Found link https://files.pythonhosted.org/packages/a4/9a/940d9cd5af9177e35487a99bf8bf0ae4c80b28eeca70c266ebc2f341cd4d/AMPAL-1.3.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.3.0 2024-02-23T12:14:35,433 Found link https://files.pythonhosted.org/packages/c9/14/728e14ff9e6c3372082ffc88a2f78016b05143f0d6bee5c432c002314169/AMPAL-1.4.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.4.0 2024-02-23T12:14:35,434 Found link https://files.pythonhosted.org/packages/83/d1/b310e662ee0fa4987e60088fb3f9590de690e01c25c1e682acb3905d9bfe/AMPAL-1.5.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.5.0 2024-02-23T12:14:35,434 Found link https://files.pythonhosted.org/packages/58/48/bdc5a2c7450230301bf7f1604f9d3c26d4b240588d65271fbef37de640ac/AMPAL-1.5.1.tar.gz (from https://pypi.org/simple/ampal/), version: 1.5.1 2024-02-23T12:14:35,435 Found link https://files.pythonhosted.org/packages/f5/68/05f1e4cdc97d4250e6010f3a39474088d4862570dd118e223928cdefcf6b/AMPAL-1.5.2.tar.gz (from https://pypi.org/simple/ampal/), version: 1.5.2 2024-02-23T12:14:35,436 Found link https://files.pythonhosted.org/packages/bc/35/833e1f07e9c31978f56f18db2ccfdd94ba0a5e95d1cce0bb5044aa562012/AMPAL-1.5.3.tar.gz (from https://pypi.org/simple/ampal/), version: 1.5.3 2024-02-23T12:14:35,437 Fetching project page and analyzing links: https://www.piwheels.org/simple/ampal/ 2024-02-23T12:14:35,437 Getting page https://www.piwheels.org/simple/ampal/ 2024-02-23T12:14:35,438 Found index url https://www.piwheels.org/simple/ 2024-02-23T12:14:35,896 Fetched page https://www.piwheels.org/simple/ampal/ as text/html 2024-02-23T12:14:35,914 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.1-cp311-cp311-linux_armv6l.whl#sha256=293d80d7e02f1e3ab614a717dec0f5999b0ae2c4a43f2a0989d56a1f4514bd9d (from https://www.piwheels.org/simple/ampal/) (requires-python:>=3.8) 2024-02-23T12:14:35,915 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.1-cp311-cp311-linux_armv7l.whl#sha256=293d80d7e02f1e3ab614a717dec0f5999b0ae2c4a43f2a0989d56a1f4514bd9d (from https://www.piwheels.org/simple/ampal/) (requires-python:>=3.8) 2024-02-23T12:14:35,915 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.1-cp39-cp39-linux_armv6l.whl#sha256=308c2269e72e03f6d10ba52bc77726d210007f90293fac278119389202a71d19 (from https://www.piwheels.org/simple/ampal/) (requires-python:>=3.8) 2024-02-23T12:14:35,916 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.1-cp39-cp39-linux_armv7l.whl#sha256=308c2269e72e03f6d10ba52bc77726d210007f90293fac278119389202a71d19 (from https://www.piwheels.org/simple/ampal/) (requires-python:>=3.8) 2024-02-23T12:14:35,917 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.0-cp37-cp37m-linux_armv6l.whl#sha256=9f537e7c8864ac775ed3296298adfc6b0d90fe6c87b9b1ded64bcaaa26dfdb45 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,917 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.0-cp37-cp37m-linux_armv7l.whl#sha256=9f537e7c8864ac775ed3296298adfc6b0d90fe6c87b9b1ded64bcaaa26dfdb45 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,918 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.0-cp39-cp39-linux_armv6l.whl#sha256=28d116c9a0b6d006ff3b257b99a35423c834410d9d40b24887d06ba89b6c9a78 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,918 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.0-cp39-cp39-linux_armv7l.whl#sha256=28d116c9a0b6d006ff3b257b99a35423c834410d9d40b24887d06ba89b6c9a78 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,919 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.0-cp311-cp311-linux_armv6l.whl#sha256=8c0266596f3b4008cfc575b341bfba7041331290eb1079007b221237fda0ea1f (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,919 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.0-cp311-cp311-linux_armv7l.whl#sha256=8c0266596f3b4008cfc575b341bfba7041331290eb1079007b221237fda0ea1f (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,920 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp39-cp39-linux_armv6l.whl#sha256=cf12ec38c08489ab3442a6bfb22e51ec2ce71637c16664f56a6bbc9b29d183b1 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,920 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp39-cp39-linux_armv7l.whl#sha256=cf12ec38c08489ab3442a6bfb22e51ec2ce71637c16664f56a6bbc9b29d183b1 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,921 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp35-cp35m-linux_armv7l.whl#sha256=bc4d3ad7d35fa4d09f2e20958dfb1a3f76fd710a23c6c78f6b8c3be0f2e88f7d (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,921 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp35-cp35m-linux_armv6l.whl#sha256=bc4d3ad7d35fa4d09f2e20958dfb1a3f76fd710a23c6c78f6b8c3be0f2e88f7d (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,922 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp34-cp34m-linux_armv6l.whl#sha256=99dc3c2af7219213a309e3f12d2d8c3f934b29c5315b239bb0af9961aa49c08a (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,922 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp34-cp34m-linux_armv7l.whl#sha256=99dc3c2af7219213a309e3f12d2d8c3f934b29c5315b239bb0af9961aa49c08a (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,923 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp37-cp37m-linux_armv7l.whl#sha256=c6a3ec7a4d78a7a62804cd65b6dad03ffa651dc3442bdb707c44724e9d7b3529 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,923 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp37-cp37m-linux_armv6l.whl#sha256=c6a3ec7a4d78a7a62804cd65b6dad03ffa651dc3442bdb707c44724e9d7b3529 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,924 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp311-cp311-linux_armv6l.whl#sha256=c568869162bc3b37fc31e10830f9d66e17b0986fdbe3e71b44c12fe7cb6544ad (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,924 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp311-cp311-linux_armv7l.whl#sha256=c568869162bc3b37fc31e10830f9d66e17b0986fdbe3e71b44c12fe7cb6544ad (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,925 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp39-cp39-linux_armv6l.whl#sha256=b73f51fd6feb1fa2d01e8ec866ffb942cfeefb981066f427ed80d707d41fd359 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,925 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp39-cp39-linux_armv7l.whl#sha256=b73f51fd6feb1fa2d01e8ec866ffb942cfeefb981066f427ed80d707d41fd359 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,926 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp34-cp34m-linux_armv6l.whl#sha256=e35e212576d5aafe8cd28110a8749e9c8330d18d904567fa567e7d17c0121091 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,926 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp34-cp34m-linux_armv7l.whl#sha256=e35e212576d5aafe8cd28110a8749e9c8330d18d904567fa567e7d17c0121091 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,927 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp35-cp35m-linux_armv7l.whl#sha256=84f1d2f265bee8d91a8182cab52a64bb290b631ded8787c87d2a5b4a6ceda98f (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,927 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp35-cp35m-linux_armv6l.whl#sha256=84f1d2f265bee8d91a8182cab52a64bb290b631ded8787c87d2a5b4a6ceda98f (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,928 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp37-cp37m-linux_armv7l.whl#sha256=79ae005751058c6d0ae8f07d7c27565b8b7047f7b8ed0958e64d9a4cdc7c01d5 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,928 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp37-cp37m-linux_armv6l.whl#sha256=79ae005751058c6d0ae8f07d7c27565b8b7047f7b8ed0958e64d9a4cdc7c01d5 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,929 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp311-cp311-linux_armv6l.whl#sha256=73b8d1eae2507dfeda986154606afc83ac5f058fbd7affe0fc5bd4068ea54977 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,929 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp311-cp311-linux_armv7l.whl#sha256=73b8d1eae2507dfeda986154606afc83ac5f058fbd7affe0fc5bd4068ea54977 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,930 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp35-cp35m-linux_armv7l.whl#sha256=40eb5738abc65a4ea4a541717a09aca225426c06cb36be6be329b3de73e2064a (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,931 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp35-cp35m-linux_armv6l.whl#sha256=40eb5738abc65a4ea4a541717a09aca225426c06cb36be6be329b3de73e2064a (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,931 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp34-cp34m-linux_armv7l.whl#sha256=88138240aa15f771fc6bac93b5091eb076c9a5b2c5b4844f08638fff1ae58fb5 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,932 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp34-cp34m-linux_armv6l.whl#sha256=88138240aa15f771fc6bac93b5091eb076c9a5b2c5b4844f08638fff1ae58fb5 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,932 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp37-cp37m-linux_armv7l.whl#sha256=fa99b21289c1d1395e7213be1f2da83442d04a06839ddb18055832b8fc0cd147 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,933 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp37-cp37m-linux_armv6l.whl#sha256=fa99b21289c1d1395e7213be1f2da83442d04a06839ddb18055832b8fc0cd147 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,933 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp311-cp311-linux_armv6l.whl#sha256=349a30297165ba1a761d367ed1b95e00b84a5bd00b72d310754ef448a6c0f0f8 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,934 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp311-cp311-linux_armv7l.whl#sha256=349a30297165ba1a761d367ed1b95e00b84a5bd00b72d310754ef448a6c0f0f8 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,934 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp39-cp39-linux_armv6l.whl#sha256=d90582d5d32b21b4ed8ea8084798413b2b24635c607cadb2e785c6c8507d0ca0 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,935 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp39-cp39-linux_armv7l.whl#sha256=d90582d5d32b21b4ed8ea8084798413b2b24635c607cadb2e785c6c8507d0ca0 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,935 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp34-cp34m-linux_armv7l.whl#sha256=9b3221fab29e565552ada7c673d9755c2f2471b50f29e9ef750c929b19fa5f89 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,936 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp34-cp34m-linux_armv6l.whl#sha256=9b3221fab29e565552ada7c673d9755c2f2471b50f29e9ef750c929b19fa5f89 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,936 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp35-cp35m-linux_armv6l.whl#sha256=a6ffdf5f12d194952f1aa9b3e71fae04a7d9bef57ac0e1af31093e76746ebf84 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,937 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp35-cp35m-linux_armv7l.whl#sha256=a6ffdf5f12d194952f1aa9b3e71fae04a7d9bef57ac0e1af31093e76746ebf84 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,937 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp37-cp37m-linux_armv6l.whl#sha256=f287657d9a53fd46bb0746640449b12c95fdede071751f9aed47e35abb3b6e4d (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,938 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp37-cp37m-linux_armv7l.whl#sha256=f287657d9a53fd46bb0746640449b12c95fdede071751f9aed47e35abb3b6e4d (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,938 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp311-cp311-linux_armv6l.whl#sha256=9a3125cfc6ec5776f4355bbc88c7f68fb045975781821b8430f94db3fd5b6cc3 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,938 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp311-cp311-linux_armv7l.whl#sha256=9a3125cfc6ec5776f4355bbc88c7f68fb045975781821b8430f94db3fd5b6cc3 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,939 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp39-cp39-linux_armv6l.whl#sha256=51ff0c97bbafd1243a607efae14185a8cded80a107c03a701d6a74f1e8ffdbbc (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,940 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp39-cp39-linux_armv7l.whl#sha256=51ff0c97bbafd1243a607efae14185a8cded80a107c03a701d6a74f1e8ffdbbc (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,940 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp34-cp34m-linux_armv6l.whl#sha256=bb10a9a83274eed0d19b7f7ae2146a7bdba87f572cee50533a338274ed94d544 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,940 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp34-cp34m-linux_armv7l.whl#sha256=bb10a9a83274eed0d19b7f7ae2146a7bdba87f572cee50533a338274ed94d544 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,941 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp35-cp35m-linux_armv6l.whl#sha256=290476b98c5232b8cfa7da3f3ab55cab1daeee460b5c683a6329c47862e59dd5 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,941 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp35-cp35m-linux_armv7l.whl#sha256=290476b98c5232b8cfa7da3f3ab55cab1daeee460b5c683a6329c47862e59dd5 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,942 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp37-cp37m-linux_armv6l.whl#sha256=b8befab0a05b7736d634a7f279404b076b347db1dd59a43d03b3cbe2a92b26f5 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,942 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp37-cp37m-linux_armv7l.whl#sha256=b8befab0a05b7736d634a7f279404b076b347db1dd59a43d03b3cbe2a92b26f5 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,943 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp311-cp311-linux_armv6l.whl#sha256=d691092eb5181b42c73d036ded2f8a1f02b8674d5cb9af3213dd1ac48d4bb5bb (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,943 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp311-cp311-linux_armv7l.whl#sha256=d691092eb5181b42c73d036ded2f8a1f02b8674d5cb9af3213dd1ac48d4bb5bb (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,944 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp39-cp39-linux_armv6l.whl#sha256=aebdb752b6316e4fe49af818624adc8ca4e73cb4b8e6e496b6eb5413e453f395 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,944 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp39-cp39-linux_armv7l.whl#sha256=aebdb752b6316e4fe49af818624adc8ca4e73cb4b8e6e496b6eb5413e453f395 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,945 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp34-cp34m-linux_armv6l.whl#sha256=99efb16db183cae49bf3225252476b2a114aa8202951ad4beedb456705aaa423 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,945 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp34-cp34m-linux_armv7l.whl#sha256=99efb16db183cae49bf3225252476b2a114aa8202951ad4beedb456705aaa423 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,946 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp35-cp35m-linux_armv7l.whl#sha256=39d01a5d76e0da3ee7e6a69b17bbeefe277dfd5078f2ae7e649d278c488c4d8a (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,946 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp35-cp35m-linux_armv6l.whl#sha256=39d01a5d76e0da3ee7e6a69b17bbeefe277dfd5078f2ae7e649d278c488c4d8a (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,947 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp37-cp37m-linux_armv7l.whl#sha256=d5f3cb2f32922d4dba6072abd7d8ff8bd5d6033c3b85e029c87038c636f2a668 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,947 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp37-cp37m-linux_armv6l.whl#sha256=d5f3cb2f32922d4dba6072abd7d8ff8bd5d6033c3b85e029c87038c636f2a668 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,948 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp311-cp311-linux_armv6l.whl#sha256=d709ee63d27727fc282c51ed593d2d8773e02e8e7f92f81ac96fcacfe139e986 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,948 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp311-cp311-linux_armv7l.whl#sha256=d709ee63d27727fc282c51ed593d2d8773e02e8e7f92f81ac96fcacfe139e986 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,949 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp39-cp39-linux_armv6l.whl#sha256=36203627d34049fa4bd5f68c5ea5982471d2696e71f6ebf3c2f40be512a0ca8f (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,949 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp39-cp39-linux_armv7l.whl#sha256=36203627d34049fa4bd5f68c5ea5982471d2696e71f6ebf3c2f40be512a0ca8f (from https://www.piwheels.org/simple/ampal/) 2024-02-23T12:14:35,950 Skipping link: not a file: https://www.piwheels.org/simple/ampal/ 2024-02-23T12:14:35,950 Skipping link: not a file: https://pypi.org/simple/ampal/ 2024-02-23T12:14:35,970 Given no hashes to check 1 links for project 'ampal': discarding no candidates 2024-02-23T12:14:35,987 Collecting ampal==1.5.3 2024-02-23T12:14:35,990 Created temporary directory: /tmp/pip-unpack-46mnlvvb 2024-02-23T12:14:36,243 Downloading AMPAL-1.5.3.tar.gz (325 kB) 2024-02-23T12:14:36,501 Added ampal==1.5.3 from https://files.pythonhosted.org/packages/bc/35/833e1f07e9c31978f56f18db2ccfdd94ba0a5e95d1cce0bb5044aa562012/AMPAL-1.5.3.tar.gz to build tracker '/tmp/pip-build-tracker-qr68ephg' 2024-02-23T12:14:36,506 Created temporary directory: /tmp/pip-build-env-yz_a71gv 2024-02-23T12:14:36,511 Installing build dependencies: started 2024-02-23T12:14:36,512 Running command pip subprocess to install build dependencies 2024-02-23T12:14:37,677 Using pip 23.3.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-02-23T12:14:38,186 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-02-23T12:14:40,410 Collecting setuptools 2024-02-23T12:14:41,604 Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.1.1-py3-none-any.whl (819 kB) 2024-02-23T12:14:41,881 Collecting wheel 2024-02-23T12:14:44,212 Using cached https://www.piwheels.org/simple/wheel/wheel-0.42.0-py3-none-any.whl (65 kB) 2024-02-23T12:14:45,914 Collecting Cython 2024-02-23T12:14:48,010 Using cached https://www.piwheels.org/simple/cython/Cython-3.0.8-cp311-cp311-linux_armv7l.whl (11.7 MB) 2024-02-23T12:14:50,959 Installing collected packages: wheel, setuptools, Cython 2024-02-23T12:14:51,188 Creating /tmp/pip-build-env-yz_a71gv/overlay/local/bin 2024-02-23T12:14:51,190 changing mode of /tmp/pip-build-env-yz_a71gv/overlay/local/bin/wheel to 755 2024-02-23T12:14:56,991 changing mode of /tmp/pip-build-env-yz_a71gv/overlay/local/bin/cygdb to 755 2024-02-23T12:14:56,993 changing mode of /tmp/pip-build-env-yz_a71gv/overlay/local/bin/cython to 755 2024-02-23T12:14:56,995 changing mode of /tmp/pip-build-env-yz_a71gv/overlay/local/bin/cythonize to 755 2024-02-23T12:14:57,021 Successfully installed Cython-3.0.8 setuptools-69.1.1 wheel-0.42.0 2024-02-23T12:14:57,348 [notice] A new release of pip is available: 23.3.1 -> 24.0 2024-02-23T12:14:57,348 [notice] To update, run: python3 -m pip install --upgrade pip 2024-02-23T12:14:57,697 Installing build dependencies: finished with status 'done' 2024-02-23T12:14:57,700 Getting requirements to build wheel: started 2024-02-23T12:14:57,702 Running command Getting requirements to build wheel 2024-02-23T12:14:59,679 /tmp/pip-build-env-yz_a71gv/overlay/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-t3s44cut/ampal_bea1cbbbdece4ae684912e9d3c7c5fcf/src/ampal/geometry.pyx 2024-02-23T12:14:59,679 tree = Parsing.p_module(s, pxd, full_module_name) 2024-02-23T12:15:01,509 Compiling src/ampal/geometry.pyx because it changed. 2024-02-23T12:15:01,511 [1/1] Cythonizing src/ampal/geometry.pyx 2024-02-23T12:15:01,848 Getting requirements to build wheel: finished with status 'done' 2024-02-23T12:15:01,866 Created temporary directory: /tmp/pip-modern-metadata-0c5x40e5 2024-02-23T12:15:01,869 Preparing metadata (pyproject.toml): started 2024-02-23T12:15:01,870 Running command Preparing metadata (pyproject.toml) 2024-02-23T12:15:03,026 /tmp/pip-build-env-yz_a71gv/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:76: _MissingDynamic: `description` defined outside of `pyproject.toml` is ignored. 2024-02-23T12:15:03,026 !! 2024-02-23T12:15:03,028 ******************************************************************************** 2024-02-23T12:15:03,028 The following seems to be defined outside of `pyproject.toml`: 2024-02-23T12:15:03,029 `description = 'A simple framework for representing biomolecular structure.'` 2024-02-23T12:15:03,031 According to the spec (see the link below), however, setuptools CANNOT 2024-02-23T12:15:03,031 consider this value unless `description` is listed as `dynamic`. 2024-02-23T12:15:03,032 https://packaging.python.org/en/latest/specifications/pyproject-toml/#declaring-project-metadata-the-project-table 2024-02-23T12:15:03,033 To prevent this problem, you can list `description` under `dynamic` or alternatively 2024-02-23T12:15:03,034 remove the `[project]` table from your file and rely entirely on other means of 2024-02-23T12:15:03,034 configuration. 2024-02-23T12:15:03,035 ******************************************************************************** 2024-02-23T12:15:03,036 !! 2024-02-23T12:15:03,037 _handle_missing_dynamic(dist, project_table) 2024-02-23T12:15:03,038 /tmp/pip-build-env-yz_a71gv/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:76: _MissingDynamic: `authors` defined outside of `pyproject.toml` is ignored. 2024-02-23T12:15:03,038 !! 2024-02-23T12:15:03,039 ******************************************************************************** 2024-02-23T12:15:03,040 The following seems to be defined outside of `pyproject.toml`: 2024-02-23T12:15:03,041 `authors = 'Woolfson Group, University of Bristol'` 2024-02-23T12:15:03,043 According to the spec (see the link below), however, setuptools CANNOT 2024-02-23T12:15:03,043 consider this value unless `authors` is listed as `dynamic`. 2024-02-23T12:15:03,045 https://packaging.python.org/en/latest/specifications/pyproject-toml/#declaring-project-metadata-the-project-table 2024-02-23T12:15:03,046 To prevent this problem, you can list `authors` under `dynamic` or alternatively 2024-02-23T12:15:03,046 remove the `[project]` table from your file and rely entirely on other means of 2024-02-23T12:15:03,047 configuration. 2024-02-23T12:15:03,048 ******************************************************************************** 2024-02-23T12:15:03,049 !! 2024-02-23T12:15:03,049 _handle_missing_dynamic(dist, project_table) 2024-02-23T12:15:03,050 /tmp/pip-build-env-yz_a71gv/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:76: _MissingDynamic: `classifiers` defined outside of `pyproject.toml` is ignored. 2024-02-23T12:15:03,050 !! 2024-02-23T12:15:03,051 ******************************************************************************** 2024-02-23T12:15:03,051 The following seems to be defined outside of `pyproject.toml`: 2024-02-23T12:15:03,052 `classifiers = ['Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Natural Language :: English', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Programming Language :: Python :: 3.5', 'Programming Language :: Python :: 3.6']` 2024-02-23T12:15:03,054 According to the spec (see the link below), however, setuptools CANNOT 2024-02-23T12:15:03,055 consider this value unless `classifiers` is listed as `dynamic`. 2024-02-23T12:15:03,056 https://packaging.python.org/en/latest/specifications/pyproject-toml/#declaring-project-metadata-the-project-table 2024-02-23T12:15:03,057 To prevent this problem, you can list `classifiers` under `dynamic` or alternatively 2024-02-23T12:15:03,057 remove the `[project]` table from your file and rely entirely on other means of 2024-02-23T12:15:03,058 configuration. 2024-02-23T12:15:03,058 ******************************************************************************** 2024-02-23T12:15:03,059 !! 2024-02-23T12:15:03,060 _handle_missing_dynamic(dist, project_table) 2024-02-23T12:15:03,060 /tmp/pip-build-env-yz_a71gv/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:83: SetuptoolsWarning: `install_requires` overwritten in `pyproject.toml` (dependencies) 2024-02-23T12:15:03,061 corresp(dist, value, root_dir) 2024-02-23T12:15:03,293 running dist_info 2024-02-23T12:15:03,298 creating /tmp/pip-modern-metadata-0c5x40e5/AMPAL.egg-info 2024-02-23T12:15:03,303 writing /tmp/pip-modern-metadata-0c5x40e5/AMPAL.egg-info/PKG-INFO 2024-02-23T12:15:03,306 writing dependency_links to /tmp/pip-modern-metadata-0c5x40e5/AMPAL.egg-info/dependency_links.txt 2024-02-23T12:15:03,308 writing requirements to /tmp/pip-modern-metadata-0c5x40e5/AMPAL.egg-info/requires.txt 2024-02-23T12:15:03,309 writing top-level names to /tmp/pip-modern-metadata-0c5x40e5/AMPAL.egg-info/top_level.txt 2024-02-23T12:15:03,311 writing manifest file '/tmp/pip-modern-metadata-0c5x40e5/AMPAL.egg-info/SOURCES.txt' 2024-02-23T12:15:03,331 reading manifest file '/tmp/pip-modern-metadata-0c5x40e5/AMPAL.egg-info/SOURCES.txt' 2024-02-23T12:15:03,333 reading manifest template 'MANIFEST.in' 2024-02-23T12:15:03,334 warning: no files found matching 'LICENSE.txt' 2024-02-23T12:15:03,345 adding license file 'LICENSE' 2024-02-23T12:15:03,347 writing manifest file '/tmp/pip-modern-metadata-0c5x40e5/AMPAL.egg-info/SOURCES.txt' 2024-02-23T12:15:03,348 creating '/tmp/pip-modern-metadata-0c5x40e5/AMPAL-1.5.3.dist-info' 2024-02-23T12:15:03,536 Preparing metadata (pyproject.toml): finished with status 'done' 2024-02-23T12:15:03,542 Source in /tmp/pip-wheel-t3s44cut/ampal_bea1cbbbdece4ae684912e9d3c7c5fcf has version 1.5.3, which satisfies requirement ampal==1.5.3 from https://files.pythonhosted.org/packages/bc/35/833e1f07e9c31978f56f18db2ccfdd94ba0a5e95d1cce0bb5044aa562012/AMPAL-1.5.3.tar.gz 2024-02-23T12:15:03,543 Removed ampal==1.5.3 from https://files.pythonhosted.org/packages/bc/35/833e1f07e9c31978f56f18db2ccfdd94ba0a5e95d1cce0bb5044aa562012/AMPAL-1.5.3.tar.gz from build tracker '/tmp/pip-build-tracker-qr68ephg' 2024-02-23T12:15:03,548 Created temporary directory: /tmp/pip-unpack-brxvy1xi 2024-02-23T12:15:03,549 Created temporary directory: /tmp/pip-unpack-f7rx1f7i 2024-02-23T12:15:03,556 Building wheels for collected packages: ampal 2024-02-23T12:15:03,560 Created temporary directory: /tmp/pip-wheel-1duz2cyh 2024-02-23T12:15:03,561 Destination directory: /tmp/pip-wheel-1duz2cyh 2024-02-23T12:15:03,563 Building wheel for ampal (pyproject.toml): started 2024-02-23T12:15:03,564 Running command Building wheel for ampal (pyproject.toml) 2024-02-23T12:15:04,703 /tmp/pip-build-env-yz_a71gv/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:76: _MissingDynamic: `description` defined outside of `pyproject.toml` is ignored. 2024-02-23T12:15:04,703 !! 2024-02-23T12:15:04,705 ******************************************************************************** 2024-02-23T12:15:04,705 The following seems to be defined outside of `pyproject.toml`: 2024-02-23T12:15:04,706 `description = 'A simple framework for representing biomolecular structure.'` 2024-02-23T12:15:04,707 According to the spec (see the link below), however, setuptools CANNOT 2024-02-23T12:15:04,708 consider this value unless `description` is listed as `dynamic`. 2024-02-23T12:15:04,709 https://packaging.python.org/en/latest/specifications/pyproject-toml/#declaring-project-metadata-the-project-table 2024-02-23T12:15:04,710 To prevent this problem, you can list `description` under `dynamic` or alternatively 2024-02-23T12:15:04,710 remove the `[project]` table from your file and rely entirely on other means of 2024-02-23T12:15:04,711 configuration. 2024-02-23T12:15:04,712 ******************************************************************************** 2024-02-23T12:15:04,713 !! 2024-02-23T12:15:04,713 _handle_missing_dynamic(dist, project_table) 2024-02-23T12:15:04,714 /tmp/pip-build-env-yz_a71gv/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:76: _MissingDynamic: `authors` defined outside of `pyproject.toml` is ignored. 2024-02-23T12:15:04,714 !! 2024-02-23T12:15:04,715 ******************************************************************************** 2024-02-23T12:15:04,716 The following seems to be defined outside of `pyproject.toml`: 2024-02-23T12:15:04,717 `authors = 'Woolfson Group, University of Bristol'` 2024-02-23T12:15:04,718 According to the spec (see the link below), however, setuptools CANNOT 2024-02-23T12:15:04,719 consider this value unless `authors` is listed as `dynamic`. 2024-02-23T12:15:04,720 https://packaging.python.org/en/latest/specifications/pyproject-toml/#declaring-project-metadata-the-project-table 2024-02-23T12:15:04,721 To prevent this problem, you can list `authors` under `dynamic` or alternatively 2024-02-23T12:15:04,722 remove the `[project]` table from your file and rely entirely on other means of 2024-02-23T12:15:04,723 configuration. 2024-02-23T12:15:04,723 ******************************************************************************** 2024-02-23T12:15:04,724 !! 2024-02-23T12:15:04,725 _handle_missing_dynamic(dist, project_table) 2024-02-23T12:15:04,725 /tmp/pip-build-env-yz_a71gv/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:76: _MissingDynamic: `classifiers` defined outside of `pyproject.toml` is ignored. 2024-02-23T12:15:04,726 !! 2024-02-23T12:15:04,727 ******************************************************************************** 2024-02-23T12:15:04,728 The following seems to be defined outside of `pyproject.toml`: 2024-02-23T12:15:04,729 `classifiers = ['Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Natural Language :: English', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Programming Language :: Python :: 3.5', 'Programming Language :: Python :: 3.6']` 2024-02-23T12:15:04,730 According to the spec (see the link below), however, setuptools CANNOT 2024-02-23T12:15:04,730 consider this value unless `classifiers` is listed as `dynamic`. 2024-02-23T12:15:04,731 https://packaging.python.org/en/latest/specifications/pyproject-toml/#declaring-project-metadata-the-project-table 2024-02-23T12:15:04,732 To prevent this problem, you can list `classifiers` under `dynamic` or alternatively 2024-02-23T12:15:04,733 remove the `[project]` table from your file and rely entirely on other means of 2024-02-23T12:15:04,733 configuration. 2024-02-23T12:15:04,734 ******************************************************************************** 2024-02-23T12:15:04,735 !! 2024-02-23T12:15:04,735 _handle_missing_dynamic(dist, project_table) 2024-02-23T12:15:04,736 /tmp/pip-build-env-yz_a71gv/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:83: SetuptoolsWarning: `install_requires` overwritten in `pyproject.toml` (dependencies) 2024-02-23T12:15:04,736 corresp(dist, value, root_dir) 2024-02-23T12:15:04,951 running bdist_wheel 2024-02-23T12:15:04,972 running build 2024-02-23T12:15:04,972 running build_py 2024-02-23T12:15:04,977 creating build 2024-02-23T12:15:04,978 creating build/lib.linux-armv7l-cpython-311 2024-02-23T12:15:04,979 creating build/lib.linux-armv7l-cpython-311/ampal 2024-02-23T12:15:04,980 copying src/ampal/data.py -> build/lib.linux-armv7l-cpython-311/ampal 2024-02-23T12:15:04,981 copying src/ampal/interactions.py -> build/lib.linux-armv7l-cpython-311/ampal 2024-02-23T12:15:04,984 copying src/ampal/dssp.py -> build/lib.linux-armv7l-cpython-311/ampal 2024-02-23T12:15:04,985 copying src/ampal/nucleic_acid.py -> build/lib.linux-armv7l-cpython-311/ampal 2024-02-23T12:15:04,988 copying src/ampal/amino_acids.py -> build/lib.linux-armv7l-cpython-311/ampal 2024-02-23T12:15:04,990 copying src/ampal/align.py -> build/lib.linux-armv7l-cpython-311/ampal 2024-02-23T12:15:04,992 copying src/ampal/analyse_protein.py -> build/lib.linux-armv7l-cpython-311/ampal 2024-02-23T12:15:04,994 copying src/ampal/assembly.py -> build/lib.linux-armv7l-cpython-311/ampal 2024-02-23T12:15:04,997 copying src/ampal/protein.py -> build/lib.linux-armv7l-cpython-311/ampal 2024-02-23T12:15:05,000 copying src/ampal/__init__.py -> build/lib.linux-armv7l-cpython-311/ampal 2024-02-23T12:15:05,001 copying src/ampal/pseudo_atoms.py -> build/lib.linux-armv7l-cpython-311/ampal 2024-02-23T12:15:05,004 copying src/ampal/pdb_parser.py -> build/lib.linux-armv7l-cpython-311/ampal 2024-02-23T12:15:05,006 copying src/ampal/ampal_warnings.py -> build/lib.linux-armv7l-cpython-311/ampal 2024-02-23T12:15:05,008 copying src/ampal/base_ampal.py -> build/lib.linux-armv7l-cpython-311/ampal 2024-02-23T12:15:05,011 copying src/ampal/naccess.py -> build/lib.linux-armv7l-cpython-311/ampal 2024-02-23T12:15:05,014 copying src/ampal/ligands.py -> build/lib.linux-armv7l-cpython-311/ampal 2024-02-23T12:15:05,015 running egg_info 2024-02-23T12:15:05,019 writing src/AMPAL.egg-info/PKG-INFO 2024-02-23T12:15:05,022 writing dependency_links to src/AMPAL.egg-info/dependency_links.txt 2024-02-23T12:15:05,024 writing requirements to src/AMPAL.egg-info/requires.txt 2024-02-23T12:15:05,025 writing top-level names to src/AMPAL.egg-info/top_level.txt 2024-02-23T12:15:05,033 reading manifest file 'src/AMPAL.egg-info/SOURCES.txt' 2024-02-23T12:15:05,036 reading manifest template 'MANIFEST.in' 2024-02-23T12:15:05,037 warning: no files found matching 'LICENSE.txt' 2024-02-23T12:15:05,047 adding license file 'LICENSE' 2024-02-23T12:15:05,050 writing manifest file 'src/AMPAL.egg-info/SOURCES.txt' 2024-02-23T12:15:05,052 /tmp/pip-build-env-yz_a71gv/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'ampal.datafiles' is absent from the `packages` configuration. 2024-02-23T12:15:05,053 !! 2024-02-23T12:15:05,054 ******************************************************************************** 2024-02-23T12:15:05,054 ############################ 2024-02-23T12:15:05,055 # Package would be ignored # 2024-02-23T12:15:05,055 ############################ 2024-02-23T12:15:05,056 Python recognizes 'ampal.datafiles' as an importable package[^1], 2024-02-23T12:15:05,056 but it is absent from setuptools' `packages` configuration. 2024-02-23T12:15:05,057 This leads to an ambiguous overall configuration. If you want to distribute this 2024-02-23T12:15:05,058 package, please make sure that 'ampal.datafiles' is explicitly added 2024-02-23T12:15:05,058 to the `packages` configuration field. 2024-02-23T12:15:05,059 Alternatively, you can also rely on setuptools' discovery methods 2024-02-23T12:15:05,060 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-02-23T12:15:05,060 instead of `find_packages(...)`/`find:`). 2024-02-23T12:15:05,061 You can read more about "package discovery" on setuptools documentation page: 2024-02-23T12:15:05,062 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-02-23T12:15:05,063 If you don't want 'ampal.datafiles' to be distributed and are 2024-02-23T12:15:05,063 already explicitly excluding 'ampal.datafiles' via 2024-02-23T12:15:05,067 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-02-23T12:15:05,074 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-02-23T12:15:05,085 combination with a more fine grained `package-data` configuration. 2024-02-23T12:15:05,087 You can read more about "package data files" on setuptools documentation page: 2024-02-23T12:15:05,088 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-02-23T12:15:05,091 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-02-23T12:15:05,091 even if it does not contain any `.py` files. 2024-02-23T12:15:05,092 On the other hand, currently there is no concept of package data 2024-02-23T12:15:05,092 directory, all directories are treated like packages. 2024-02-23T12:15:05,093 ******************************************************************************** 2024-02-23T12:15:05,094 !! 2024-02-23T12:15:05,095 check.warn(importable) 2024-02-23T12:15:05,096 copying src/ampal/geometry.c -> build/lib.linux-armv7l-cpython-311/ampal 2024-02-23T12:15:05,096 copying src/ampal/geometry.pyx -> build/lib.linux-armv7l-cpython-311/ampal 2024-02-23T12:15:05,097 creating build/lib.linux-armv7l-cpython-311/ampal/datafiles 2024-02-23T12:15:05,097 copying src/ampal/datafiles/amino_acids.json -> build/lib.linux-armv7l-cpython-311/ampal/datafiles 2024-02-23T12:15:05,099 copying src/ampal/datafiles/chemical_elements.json -> build/lib.linux-armv7l-cpython-311/ampal/datafiles 2024-02-23T12:15:05,100 copying src/ampal/datafiles/pdb_atom_column_format.json -> build/lib.linux-armv7l-cpython-311/ampal/datafiles 2024-02-23T12:15:05,106 running build_ext 2024-02-23T12:15:05,111 building 'ampal.geometry' extension 2024-02-23T12:15:05,112 creating build/temp.linux-armv7l-cpython-311 2024-02-23T12:15:05,113 creating build/temp.linux-armv7l-cpython-311/src 2024-02-23T12:15:05,114 creating build/temp.linux-armv7l-cpython-311/src/ampal 2024-02-23T12:15:05,115 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c src/ampal/geometry.c -o build/temp.linux-armv7l-cpython-311/src/ampal/geometry.o 2024-02-23T12:15:11,034 src/ampal/geometry.c:7370:18: warning: ‘__pyx_f_5ampal_8geometry__unit_vector’ defined but not used [-Wunused-function] 2024-02-23T12:15:11,035 7370 | static PyObject *__pyx_f_5ampal_8geometry__unit_vector(double *__pyx_v_a) { 2024-02-23T12:15:11,035 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-02-23T12:15:11,040 src/ampal/geometry.c:6449:15: warning: ‘__pyx_f_5ampal_8geometry__dot_product_2d’ defined but not used [-Wunused-function] 2024-02-23T12:15:11,041 6449 | static double __pyx_f_5ampal_8geometry__dot_product_2d(double *__pyx_v_a, double *__pyx_v_b) { 2024-02-23T12:15:11,041 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-02-23T12:16:38,389 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/ampal/geometry.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/ampal/geometry.cpython-311-arm-linux-gnueabihf.so 2024-02-23T12:16:38,583 installing to build/bdist.linux-armv7l/wheel 2024-02-23T12:16:38,584 running install 2024-02-23T12:16:38,608 running install_lib 2024-02-23T12:16:38,613 creating build/bdist.linux-armv7l 2024-02-23T12:16:38,614 creating build/bdist.linux-armv7l/wheel 2024-02-23T12:16:38,616 creating build/bdist.linux-armv7l/wheel/ampal 2024-02-23T12:16:38,617 copying build/lib.linux-armv7l-cpython-311/ampal/data.py -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T12:16:38,619 copying build/lib.linux-armv7l-cpython-311/ampal/interactions.py -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T12:16:38,622 copying build/lib.linux-armv7l-cpython-311/ampal/dssp.py -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T12:16:38,624 copying build/lib.linux-armv7l-cpython-311/ampal/nucleic_acid.py -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T12:16:38,626 copying build/lib.linux-armv7l-cpython-311/ampal/amino_acids.py -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T12:16:38,629 copying build/lib.linux-armv7l-cpython-311/ampal/align.py -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T12:16:38,631 copying build/lib.linux-armv7l-cpython-311/ampal/analyse_protein.py -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T12:16:38,634 copying build/lib.linux-armv7l-cpython-311/ampal/assembly.py -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T12:16:38,637 copying build/lib.linux-armv7l-cpython-311/ampal/protein.py -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T12:16:38,640 copying build/lib.linux-armv7l-cpython-311/ampal/__init__.py -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T12:16:38,642 copying build/lib.linux-armv7l-cpython-311/ampal/pseudo_atoms.py -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T12:16:38,644 copying build/lib.linux-armv7l-cpython-311/ampal/pdb_parser.py -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T12:16:38,647 copying build/lib.linux-armv7l-cpython-311/ampal/ampal_warnings.py -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T12:16:38,649 copying build/lib.linux-armv7l-cpython-311/ampal/geometry.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T12:16:38,693 copying build/lib.linux-armv7l-cpython-311/ampal/geometry.c -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T12:16:38,725 copying build/lib.linux-armv7l-cpython-311/ampal/geometry.pyx -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T12:16:38,729 creating build/bdist.linux-armv7l/wheel/ampal/datafiles 2024-02-23T12:16:38,729 copying build/lib.linux-armv7l-cpython-311/ampal/datafiles/chemical_elements.json -> build/bdist.linux-armv7l/wheel/ampal/datafiles 2024-02-23T12:16:38,733 copying build/lib.linux-armv7l-cpython-311/ampal/datafiles/pdb_atom_column_format.json -> build/bdist.linux-armv7l/wheel/ampal/datafiles 2024-02-23T12:16:38,736 copying build/lib.linux-armv7l-cpython-311/ampal/datafiles/amino_acids.json -> build/bdist.linux-armv7l/wheel/ampal/datafiles 2024-02-23T12:16:38,740 copying build/lib.linux-armv7l-cpython-311/ampal/base_ampal.py -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T12:16:38,742 copying build/lib.linux-armv7l-cpython-311/ampal/naccess.py -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T12:16:38,744 copying build/lib.linux-armv7l-cpython-311/ampal/ligands.py -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T12:16:38,746 running install_egg_info 2024-02-23T12:16:38,750 Copying src/AMPAL.egg-info to build/bdist.linux-armv7l/wheel/AMPAL-1.5.3-py3.11.egg-info 2024-02-23T12:16:38,761 running install_scripts 2024-02-23T12:16:38,807 creating build/bdist.linux-armv7l/wheel/AMPAL-1.5.3.dist-info/WHEEL 2024-02-23T12:16:38,809 creating '/tmp/pip-wheel-1duz2cyh/.tmp-7ax01b65/AMPAL-1.5.3-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-02-23T12:16:38,812 adding 'ampal/__init__.py' 2024-02-23T12:16:38,814 adding 'ampal/align.py' 2024-02-23T12:16:38,817 adding 'ampal/amino_acids.py' 2024-02-23T12:16:38,818 adding 'ampal/ampal_warnings.py' 2024-02-23T12:16:38,821 adding 'ampal/analyse_protein.py' 2024-02-23T12:16:38,824 adding 'ampal/assembly.py' 2024-02-23T12:16:38,827 adding 'ampal/base_ampal.py' 2024-02-23T12:16:38,829 adding 'ampal/data.py' 2024-02-23T12:16:38,830 adding 'ampal/dssp.py' 2024-02-23T12:16:38,962 adding 'ampal/geometry.c' 2024-02-23T12:16:39,459 adding 'ampal/geometry.cpython-311-arm-linux-gnueabihf.so' 2024-02-23T12:16:39,481 adding 'ampal/geometry.pyx' 2024-02-23T12:16:39,483 adding 'ampal/interactions.py' 2024-02-23T12:16:39,484 adding 'ampal/ligands.py' 2024-02-23T12:16:39,486 adding 'ampal/naccess.py' 2024-02-23T12:16:39,487 adding 'ampal/nucleic_acid.py' 2024-02-23T12:16:39,489 adding 'ampal/pdb_parser.py' 2024-02-23T12:16:39,494 adding 'ampal/protein.py' 2024-02-23T12:16:39,496 adding 'ampal/pseudo_atoms.py' 2024-02-23T12:16:39,504 adding 'ampal/datafiles/amino_acids.json' 2024-02-23T12:16:39,508 adding 'ampal/datafiles/chemical_elements.json' 2024-02-23T12:16:39,525 adding 'ampal/datafiles/pdb_atom_column_format.json' 2024-02-23T12:16:39,527 adding 'AMPAL-1.5.3.dist-info/LICENSE' 2024-02-23T12:16:39,528 adding 'AMPAL-1.5.3.dist-info/METADATA' 2024-02-23T12:16:39,529 adding 'AMPAL-1.5.3.dist-info/WHEEL' 2024-02-23T12:16:39,530 adding 'AMPAL-1.5.3.dist-info/top_level.txt' 2024-02-23T12:16:39,534 adding 'AMPAL-1.5.3.dist-info/RECORD' 2024-02-23T12:16:39,546 removing build/bdist.linux-armv7l/wheel 2024-02-23T12:16:39,716 Building wheel for ampal (pyproject.toml): finished with status 'done' 2024-02-23T12:16:39,748 Created wheel for ampal: filename=AMPAL-1.5.3-cp311-cp311-linux_armv7l.whl size=1354328 sha256=c64160382a0887caabeba27518b64e42c611c2fc168279f9d685b517deff86e2 2024-02-23T12:16:39,749 Stored in directory: /tmp/pip-ephem-wheel-cache-ewwkthbb/wheels/bc/b7/41/229d945879dcbb9fa32f543733a24a3dba6c21c3f0a0be5125 2024-02-23T12:16:39,760 Successfully built ampal 2024-02-23T12:16:39,793 Removed build tracker: '/tmp/pip-build-tracker-qr68ephg'