2024-02-23T14:18:08,940 Created temporary directory: /tmp/pip-build-tracker-wl499lna 2024-02-23T14:18:08,942 Initialized build tracking at /tmp/pip-build-tracker-wl499lna 2024-02-23T14:18:08,942 Created build tracker: /tmp/pip-build-tracker-wl499lna 2024-02-23T14:18:08,942 Entered build tracker: /tmp/pip-build-tracker-wl499lna 2024-02-23T14:18:08,943 Created temporary directory: /tmp/pip-wheel-rohyk2z1 2024-02-23T14:18:08,947 Created temporary directory: /tmp/pip-ephem-wheel-cache-lznz97ys 2024-02-23T14:18:08,971 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-02-23T14:18:08,974 2 location(s) to search for versions of ampal: 2024-02-23T14:18:08,974 * https://pypi.org/simple/ampal/ 2024-02-23T14:18:08,974 * https://www.piwheels.org/simple/ampal/ 2024-02-23T14:18:08,975 Fetching project page and analyzing links: https://pypi.org/simple/ampal/ 2024-02-23T14:18:08,975 Getting page https://pypi.org/simple/ampal/ 2024-02-23T14:18:08,977 Found index url https://pypi.org/simple/ 2024-02-23T14:18:09,029 Fetched page https://pypi.org/simple/ampal/ as application/vnd.pypi.simple.v1+json 2024-02-23T14:18:09,031 Found link https://files.pythonhosted.org/packages/3f/e5/03da3a77bba138c165451d3f8efb7fd32818aea4a6212b420c558e9088d8/AMPAL-1.0.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.0.0 2024-02-23T14:18:09,032 Found link https://files.pythonhosted.org/packages/c2/90/2aecb8bdeab8de4f896f38fc792b434292f0f96a86cd3b860c849f4cfd55/AMPAL-1.0.1.tar.gz (from https://pypi.org/simple/ampal/), version: 1.0.1 2024-02-23T14:18:09,032 Found link https://files.pythonhosted.org/packages/29/39/ac32680ba515731a81942c3a1bb8d0731fc0da02185885794ccf51dd604b/AMPAL-1.1.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.1.0 2024-02-23T14:18:09,032 Found link https://files.pythonhosted.org/packages/f4/11/85ef80392ed433f9024abc0bacc2173dd88ce0e7c42f23b804cc3650b1e5/AMPAL-1.2.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.2.0 2024-02-23T14:18:09,033 Found link https://files.pythonhosted.org/packages/a4/9a/940d9cd5af9177e35487a99bf8bf0ae4c80b28eeca70c266ebc2f341cd4d/AMPAL-1.3.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.3.0 2024-02-23T14:18:09,033 Found link https://files.pythonhosted.org/packages/c9/14/728e14ff9e6c3372082ffc88a2f78016b05143f0d6bee5c432c002314169/AMPAL-1.4.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.4.0 2024-02-23T14:18:09,033 Found link https://files.pythonhosted.org/packages/83/d1/b310e662ee0fa4987e60088fb3f9590de690e01c25c1e682acb3905d9bfe/AMPAL-1.5.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.5.0 2024-02-23T14:18:09,034 Found link https://files.pythonhosted.org/packages/58/48/bdc5a2c7450230301bf7f1604f9d3c26d4b240588d65271fbef37de640ac/AMPAL-1.5.1.tar.gz (from https://pypi.org/simple/ampal/), version: 1.5.1 2024-02-23T14:18:09,034 Found link https://files.pythonhosted.org/packages/f5/68/05f1e4cdc97d4250e6010f3a39474088d4862570dd118e223928cdefcf6b/AMPAL-1.5.2.tar.gz (from https://pypi.org/simple/ampal/), version: 1.5.2 2024-02-23T14:18:09,034 Found link https://files.pythonhosted.org/packages/bc/35/833e1f07e9c31978f56f18db2ccfdd94ba0a5e95d1cce0bb5044aa562012/AMPAL-1.5.3.tar.gz (from https://pypi.org/simple/ampal/), version: 1.5.3 2024-02-23T14:18:09,035 Fetching project page and analyzing links: https://www.piwheels.org/simple/ampal/ 2024-02-23T14:18:09,035 Getting page https://www.piwheels.org/simple/ampal/ 2024-02-23T14:18:09,036 Found index url https://www.piwheels.org/simple/ 2024-02-23T14:18:15,058 Fetched page https://www.piwheels.org/simple/ampal/ as text/html 2024-02-23T14:18:15,107 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.3-cp311-cp311-linux_armv6l.whl#sha256=c64160382a0887caabeba27518b64e42c611c2fc168279f9d685b517deff86e2 (from https://www.piwheels.org/simple/ampal/) (requires-python:>=3.8) 2024-02-23T14:18:15,107 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.3-cp311-cp311-linux_armv7l.whl#sha256=c64160382a0887caabeba27518b64e42c611c2fc168279f9d685b517deff86e2 (from https://www.piwheels.org/simple/ampal/) (requires-python:>=3.8) 2024-02-23T14:18:15,108 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.1-cp311-cp311-linux_armv6l.whl#sha256=293d80d7e02f1e3ab614a717dec0f5999b0ae2c4a43f2a0989d56a1f4514bd9d (from https://www.piwheels.org/simple/ampal/) (requires-python:>=3.8) 2024-02-23T14:18:15,108 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.1-cp311-cp311-linux_armv7l.whl#sha256=293d80d7e02f1e3ab614a717dec0f5999b0ae2c4a43f2a0989d56a1f4514bd9d (from https://www.piwheels.org/simple/ampal/) (requires-python:>=3.8) 2024-02-23T14:18:15,109 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.1-cp39-cp39-linux_armv6l.whl#sha256=308c2269e72e03f6d10ba52bc77726d210007f90293fac278119389202a71d19 (from https://www.piwheels.org/simple/ampal/) (requires-python:>=3.8) 2024-02-23T14:18:15,109 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.1-cp39-cp39-linux_armv7l.whl#sha256=308c2269e72e03f6d10ba52bc77726d210007f90293fac278119389202a71d19 (from https://www.piwheels.org/simple/ampal/) (requires-python:>=3.8) 2024-02-23T14:18:15,110 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.0-cp37-cp37m-linux_armv6l.whl#sha256=9f537e7c8864ac775ed3296298adfc6b0d90fe6c87b9b1ded64bcaaa26dfdb45 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,110 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.0-cp37-cp37m-linux_armv7l.whl#sha256=9f537e7c8864ac775ed3296298adfc6b0d90fe6c87b9b1ded64bcaaa26dfdb45 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,111 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.0-cp39-cp39-linux_armv6l.whl#sha256=28d116c9a0b6d006ff3b257b99a35423c834410d9d40b24887d06ba89b6c9a78 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,111 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.0-cp39-cp39-linux_armv7l.whl#sha256=28d116c9a0b6d006ff3b257b99a35423c834410d9d40b24887d06ba89b6c9a78 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,112 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.0-cp311-cp311-linux_armv6l.whl#sha256=8c0266596f3b4008cfc575b341bfba7041331290eb1079007b221237fda0ea1f (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,112 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.0-cp311-cp311-linux_armv7l.whl#sha256=8c0266596f3b4008cfc575b341bfba7041331290eb1079007b221237fda0ea1f (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,113 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp39-cp39-linux_armv6l.whl#sha256=cf12ec38c08489ab3442a6bfb22e51ec2ce71637c16664f56a6bbc9b29d183b1 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,113 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp39-cp39-linux_armv7l.whl#sha256=cf12ec38c08489ab3442a6bfb22e51ec2ce71637c16664f56a6bbc9b29d183b1 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,114 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp35-cp35m-linux_armv7l.whl#sha256=bc4d3ad7d35fa4d09f2e20958dfb1a3f76fd710a23c6c78f6b8c3be0f2e88f7d (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,114 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp35-cp35m-linux_armv6l.whl#sha256=bc4d3ad7d35fa4d09f2e20958dfb1a3f76fd710a23c6c78f6b8c3be0f2e88f7d (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,115 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp34-cp34m-linux_armv6l.whl#sha256=99dc3c2af7219213a309e3f12d2d8c3f934b29c5315b239bb0af9961aa49c08a (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,115 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp34-cp34m-linux_armv7l.whl#sha256=99dc3c2af7219213a309e3f12d2d8c3f934b29c5315b239bb0af9961aa49c08a (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,116 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp37-cp37m-linux_armv7l.whl#sha256=c6a3ec7a4d78a7a62804cd65b6dad03ffa651dc3442bdb707c44724e9d7b3529 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,116 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp37-cp37m-linux_armv6l.whl#sha256=c6a3ec7a4d78a7a62804cd65b6dad03ffa651dc3442bdb707c44724e9d7b3529 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,117 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp311-cp311-linux_armv6l.whl#sha256=c568869162bc3b37fc31e10830f9d66e17b0986fdbe3e71b44c12fe7cb6544ad (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,117 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp311-cp311-linux_armv7l.whl#sha256=c568869162bc3b37fc31e10830f9d66e17b0986fdbe3e71b44c12fe7cb6544ad (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,117 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp39-cp39-linux_armv6l.whl#sha256=b73f51fd6feb1fa2d01e8ec866ffb942cfeefb981066f427ed80d707d41fd359 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,118 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp39-cp39-linux_armv7l.whl#sha256=b73f51fd6feb1fa2d01e8ec866ffb942cfeefb981066f427ed80d707d41fd359 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,118 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp34-cp34m-linux_armv6l.whl#sha256=e35e212576d5aafe8cd28110a8749e9c8330d18d904567fa567e7d17c0121091 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,118 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp34-cp34m-linux_armv7l.whl#sha256=e35e212576d5aafe8cd28110a8749e9c8330d18d904567fa567e7d17c0121091 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,118 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp35-cp35m-linux_armv7l.whl#sha256=84f1d2f265bee8d91a8182cab52a64bb290b631ded8787c87d2a5b4a6ceda98f (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,118 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp35-cp35m-linux_armv6l.whl#sha256=84f1d2f265bee8d91a8182cab52a64bb290b631ded8787c87d2a5b4a6ceda98f (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,119 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp37-cp37m-linux_armv7l.whl#sha256=79ae005751058c6d0ae8f07d7c27565b8b7047f7b8ed0958e64d9a4cdc7c01d5 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,119 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp37-cp37m-linux_armv6l.whl#sha256=79ae005751058c6d0ae8f07d7c27565b8b7047f7b8ed0958e64d9a4cdc7c01d5 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,119 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp311-cp311-linux_armv6l.whl#sha256=73b8d1eae2507dfeda986154606afc83ac5f058fbd7affe0fc5bd4068ea54977 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,119 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp311-cp311-linux_armv7l.whl#sha256=73b8d1eae2507dfeda986154606afc83ac5f058fbd7affe0fc5bd4068ea54977 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,119 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp35-cp35m-linux_armv7l.whl#sha256=40eb5738abc65a4ea4a541717a09aca225426c06cb36be6be329b3de73e2064a (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,120 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp35-cp35m-linux_armv6l.whl#sha256=40eb5738abc65a4ea4a541717a09aca225426c06cb36be6be329b3de73e2064a (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,120 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp34-cp34m-linux_armv7l.whl#sha256=88138240aa15f771fc6bac93b5091eb076c9a5b2c5b4844f08638fff1ae58fb5 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,120 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp34-cp34m-linux_armv6l.whl#sha256=88138240aa15f771fc6bac93b5091eb076c9a5b2c5b4844f08638fff1ae58fb5 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,120 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp37-cp37m-linux_armv7l.whl#sha256=fa99b21289c1d1395e7213be1f2da83442d04a06839ddb18055832b8fc0cd147 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,120 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp37-cp37m-linux_armv6l.whl#sha256=fa99b21289c1d1395e7213be1f2da83442d04a06839ddb18055832b8fc0cd147 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,121 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp311-cp311-linux_armv6l.whl#sha256=349a30297165ba1a761d367ed1b95e00b84a5bd00b72d310754ef448a6c0f0f8 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,121 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp311-cp311-linux_armv7l.whl#sha256=349a30297165ba1a761d367ed1b95e00b84a5bd00b72d310754ef448a6c0f0f8 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,121 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp39-cp39-linux_armv6l.whl#sha256=d90582d5d32b21b4ed8ea8084798413b2b24635c607cadb2e785c6c8507d0ca0 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,121 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp39-cp39-linux_armv7l.whl#sha256=d90582d5d32b21b4ed8ea8084798413b2b24635c607cadb2e785c6c8507d0ca0 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,121 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp34-cp34m-linux_armv7l.whl#sha256=9b3221fab29e565552ada7c673d9755c2f2471b50f29e9ef750c929b19fa5f89 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,121 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp34-cp34m-linux_armv6l.whl#sha256=9b3221fab29e565552ada7c673d9755c2f2471b50f29e9ef750c929b19fa5f89 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,122 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp35-cp35m-linux_armv6l.whl#sha256=a6ffdf5f12d194952f1aa9b3e71fae04a7d9bef57ac0e1af31093e76746ebf84 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,122 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp35-cp35m-linux_armv7l.whl#sha256=a6ffdf5f12d194952f1aa9b3e71fae04a7d9bef57ac0e1af31093e76746ebf84 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,122 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp37-cp37m-linux_armv6l.whl#sha256=f287657d9a53fd46bb0746640449b12c95fdede071751f9aed47e35abb3b6e4d (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,122 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp37-cp37m-linux_armv7l.whl#sha256=f287657d9a53fd46bb0746640449b12c95fdede071751f9aed47e35abb3b6e4d (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,122 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp311-cp311-linux_armv6l.whl#sha256=9a3125cfc6ec5776f4355bbc88c7f68fb045975781821b8430f94db3fd5b6cc3 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,123 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp311-cp311-linux_armv7l.whl#sha256=9a3125cfc6ec5776f4355bbc88c7f68fb045975781821b8430f94db3fd5b6cc3 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,123 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp39-cp39-linux_armv6l.whl#sha256=51ff0c97bbafd1243a607efae14185a8cded80a107c03a701d6a74f1e8ffdbbc (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,123 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp39-cp39-linux_armv7l.whl#sha256=51ff0c97bbafd1243a607efae14185a8cded80a107c03a701d6a74f1e8ffdbbc (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,123 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp34-cp34m-linux_armv6l.whl#sha256=bb10a9a83274eed0d19b7f7ae2146a7bdba87f572cee50533a338274ed94d544 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,123 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp34-cp34m-linux_armv7l.whl#sha256=bb10a9a83274eed0d19b7f7ae2146a7bdba87f572cee50533a338274ed94d544 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,124 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp35-cp35m-linux_armv6l.whl#sha256=290476b98c5232b8cfa7da3f3ab55cab1daeee460b5c683a6329c47862e59dd5 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,124 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp35-cp35m-linux_armv7l.whl#sha256=290476b98c5232b8cfa7da3f3ab55cab1daeee460b5c683a6329c47862e59dd5 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,124 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp37-cp37m-linux_armv6l.whl#sha256=b8befab0a05b7736d634a7f279404b076b347db1dd59a43d03b3cbe2a92b26f5 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,124 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp37-cp37m-linux_armv7l.whl#sha256=b8befab0a05b7736d634a7f279404b076b347db1dd59a43d03b3cbe2a92b26f5 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,124 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp311-cp311-linux_armv6l.whl#sha256=d691092eb5181b42c73d036ded2f8a1f02b8674d5cb9af3213dd1ac48d4bb5bb (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,125 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp311-cp311-linux_armv7l.whl#sha256=d691092eb5181b42c73d036ded2f8a1f02b8674d5cb9af3213dd1ac48d4bb5bb (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,125 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp39-cp39-linux_armv6l.whl#sha256=aebdb752b6316e4fe49af818624adc8ca4e73cb4b8e6e496b6eb5413e453f395 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,125 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp39-cp39-linux_armv7l.whl#sha256=aebdb752b6316e4fe49af818624adc8ca4e73cb4b8e6e496b6eb5413e453f395 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,125 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp34-cp34m-linux_armv6l.whl#sha256=99efb16db183cae49bf3225252476b2a114aa8202951ad4beedb456705aaa423 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,125 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp34-cp34m-linux_armv7l.whl#sha256=99efb16db183cae49bf3225252476b2a114aa8202951ad4beedb456705aaa423 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,125 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp35-cp35m-linux_armv7l.whl#sha256=39d01a5d76e0da3ee7e6a69b17bbeefe277dfd5078f2ae7e649d278c488c4d8a (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,126 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp35-cp35m-linux_armv6l.whl#sha256=39d01a5d76e0da3ee7e6a69b17bbeefe277dfd5078f2ae7e649d278c488c4d8a (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,126 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp37-cp37m-linux_armv7l.whl#sha256=d5f3cb2f32922d4dba6072abd7d8ff8bd5d6033c3b85e029c87038c636f2a668 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,126 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp37-cp37m-linux_armv6l.whl#sha256=d5f3cb2f32922d4dba6072abd7d8ff8bd5d6033c3b85e029c87038c636f2a668 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,126 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp311-cp311-linux_armv6l.whl#sha256=d709ee63d27727fc282c51ed593d2d8773e02e8e7f92f81ac96fcacfe139e986 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,126 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp311-cp311-linux_armv7l.whl#sha256=d709ee63d27727fc282c51ed593d2d8773e02e8e7f92f81ac96fcacfe139e986 (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,127 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp39-cp39-linux_armv6l.whl#sha256=36203627d34049fa4bd5f68c5ea5982471d2696e71f6ebf3c2f40be512a0ca8f (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,127 Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp39-cp39-linux_armv7l.whl#sha256=36203627d34049fa4bd5f68c5ea5982471d2696e71f6ebf3c2f40be512a0ca8f (from https://www.piwheels.org/simple/ampal/) 2024-02-23T14:18:15,127 Skipping link: not a file: https://www.piwheels.org/simple/ampal/ 2024-02-23T14:18:15,127 Skipping link: not a file: https://pypi.org/simple/ampal/ 2024-02-23T14:18:15,148 Given no hashes to check 1 links for project 'ampal': discarding no candidates 2024-02-23T14:18:15,165 Collecting ampal==1.5.3 2024-02-23T14:18:15,167 Created temporary directory: /tmp/pip-unpack-40ibwu5_ 2024-02-23T14:18:15,210 Downloading AMPAL-1.5.3.tar.gz (325 kB) 2024-02-23T14:18:15,412 Added ampal==1.5.3 from https://files.pythonhosted.org/packages/bc/35/833e1f07e9c31978f56f18db2ccfdd94ba0a5e95d1cce0bb5044aa562012/AMPAL-1.5.3.tar.gz to build tracker '/tmp/pip-build-tracker-wl499lna' 2024-02-23T14:18:15,416 Created temporary directory: /tmp/pip-build-env-cw9drjdh 2024-02-23T14:18:15,427 Installing build dependencies: started 2024-02-23T14:18:15,428 Running command pip subprocess to install build dependencies 2024-02-23T14:18:16,675 Using pip 23.3.1 from /home/piwheels/.local/lib/python3.9/site-packages/pip (python 3.9) 2024-02-23T14:18:17,252 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-02-23T14:18:22,792 Collecting setuptools 2024-02-23T14:18:27,097 Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.1.1-py3-none-any.whl (819 kB) 2024-02-23T14:18:30,652 Collecting wheel 2024-02-23T14:18:30,668 Using cached https://www.piwheels.org/simple/wheel/wheel-0.42.0-py3-none-any.whl (65 kB) 2024-02-23T14:18:31,923 Collecting Cython 2024-02-23T14:18:31,925 Obtaining dependency information for Cython from https://files.pythonhosted.org/packages/e3/7f/f584f5d15323feb897d42ef0e9d910649e2150d7a30cf7e7a8cc1d236e6f/Cython-3.0.8-py2.py3-none-any.whl.metadata 2024-02-23T14:18:31,932 Using cached Cython-3.0.8-py2.py3-none-any.whl.metadata (3.2 kB) 2024-02-23T14:18:32,121 Using cached Cython-3.0.8-py2.py3-none-any.whl (1.2 MB) 2024-02-23T14:18:34,014 Installing collected packages: wheel, setuptools, Cython 2024-02-23T14:18:34,234 Creating /tmp/pip-build-env-cw9drjdh/overlay/bin 2024-02-23T14:18:34,237 changing mode of /tmp/pip-build-env-cw9drjdh/overlay/bin/wheel to 755 2024-02-23T14:18:38,921 changing mode of /tmp/pip-build-env-cw9drjdh/overlay/bin/cygdb to 755 2024-02-23T14:18:38,923 changing mode of /tmp/pip-build-env-cw9drjdh/overlay/bin/cython to 755 2024-02-23T14:18:38,925 changing mode of /tmp/pip-build-env-cw9drjdh/overlay/bin/cythonize to 755 2024-02-23T14:18:38,947 Successfully installed Cython-3.0.8 setuptools-69.1.1 wheel-0.42.0 2024-02-23T14:18:39,137 [notice] A new release of pip is available: 23.3.1 -> 24.0 2024-02-23T14:18:39,137 [notice] To update, run: python3 -m pip install --upgrade pip 2024-02-23T14:18:39,499 Installing build dependencies: finished with status 'done' 2024-02-23T14:18:39,503 Getting requirements to build wheel: started 2024-02-23T14:18:39,504 Running command Getting requirements to build wheel 2024-02-23T14:18:42,072 /tmp/pip-build-env-cw9drjdh/overlay/lib/python3.9/site-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-rohyk2z1/ampal_7901560a38a24fc68badb391afe8b078/src/ampal/geometry.pyx 2024-02-23T14:18:42,073 tree = Parsing.p_module(s, pxd, full_module_name) 2024-02-23T14:18:45,970 Compiling src/ampal/geometry.pyx because it changed. 2024-02-23T14:18:45,970 [1/1] Cythonizing src/ampal/geometry.pyx 2024-02-23T14:18:46,297 Getting requirements to build wheel: finished with status 'done' 2024-02-23T14:18:46,307 Created temporary directory: /tmp/pip-modern-metadata-t5jrzees 2024-02-23T14:18:46,310 Preparing metadata (pyproject.toml): started 2024-02-23T14:18:46,311 Running command Preparing metadata (pyproject.toml) 2024-02-23T14:18:47,553 /tmp/pip-build-env-cw9drjdh/overlay/lib/python3.9/site-packages/setuptools/config/_apply_pyprojecttoml.py:76: _MissingDynamic: `description` defined outside of `pyproject.toml` is ignored. 2024-02-23T14:18:47,553 !! 2024-02-23T14:18:47,554 ******************************************************************************** 2024-02-23T14:18:47,554 The following seems to be defined outside of `pyproject.toml`: 2024-02-23T14:18:47,554 `description = 'A simple framework for representing biomolecular structure.'` 2024-02-23T14:18:47,554 According to the spec (see the link below), however, setuptools CANNOT 2024-02-23T14:18:47,554 consider this value unless `description` is listed as `dynamic`. 2024-02-23T14:18:47,555 https://packaging.python.org/en/latest/specifications/pyproject-toml/#declaring-project-metadata-the-project-table 2024-02-23T14:18:47,555 To prevent this problem, you can list `description` under `dynamic` or alternatively 2024-02-23T14:18:47,555 remove the `[project]` table from your file and rely entirely on other means of 2024-02-23T14:18:47,555 configuration. 2024-02-23T14:18:47,555 ******************************************************************************** 2024-02-23T14:18:47,555 !! 2024-02-23T14:18:47,556 _handle_missing_dynamic(dist, project_table) 2024-02-23T14:18:47,556 /tmp/pip-build-env-cw9drjdh/overlay/lib/python3.9/site-packages/setuptools/config/_apply_pyprojecttoml.py:76: _MissingDynamic: `authors` defined outside of `pyproject.toml` is ignored. 2024-02-23T14:18:47,556 !! 2024-02-23T14:18:47,556 ******************************************************************************** 2024-02-23T14:18:47,556 The following seems to be defined outside of `pyproject.toml`: 2024-02-23T14:18:47,557 `authors = 'Woolfson Group, University of Bristol'` 2024-02-23T14:18:47,557 According to the spec (see the link below), however, setuptools CANNOT 2024-02-23T14:18:47,557 consider this value unless `authors` is listed as `dynamic`. 2024-02-23T14:18:47,557 https://packaging.python.org/en/latest/specifications/pyproject-toml/#declaring-project-metadata-the-project-table 2024-02-23T14:18:47,557 To prevent this problem, you can list `authors` under `dynamic` or alternatively 2024-02-23T14:18:47,558 remove the `[project]` table from your file and rely entirely on other means of 2024-02-23T14:18:47,558 configuration. 2024-02-23T14:18:47,558 ******************************************************************************** 2024-02-23T14:18:47,558 !! 2024-02-23T14:18:47,558 _handle_missing_dynamic(dist, project_table) 2024-02-23T14:18:47,558 /tmp/pip-build-env-cw9drjdh/overlay/lib/python3.9/site-packages/setuptools/config/_apply_pyprojecttoml.py:76: _MissingDynamic: `classifiers` defined outside of `pyproject.toml` is ignored. 2024-02-23T14:18:47,558 !! 2024-02-23T14:18:47,559 ******************************************************************************** 2024-02-23T14:18:47,559 The following seems to be defined outside of `pyproject.toml`: 2024-02-23T14:18:47,559 `classifiers = ['Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Natural Language :: English', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Programming Language :: Python :: 3.5', 'Programming Language :: Python :: 3.6']` 2024-02-23T14:18:47,559 According to the spec (see the link below), however, setuptools CANNOT 2024-02-23T14:18:47,559 consider this value unless `classifiers` is listed as `dynamic`. 2024-02-23T14:18:47,560 https://packaging.python.org/en/latest/specifications/pyproject-toml/#declaring-project-metadata-the-project-table 2024-02-23T14:18:47,560 To prevent this problem, you can list `classifiers` under `dynamic` or alternatively 2024-02-23T14:18:47,560 remove the `[project]` table from your file and rely entirely on other means of 2024-02-23T14:18:47,560 configuration. 2024-02-23T14:18:47,560 ******************************************************************************** 2024-02-23T14:18:47,561 !! 2024-02-23T14:18:47,561 _handle_missing_dynamic(dist, project_table) 2024-02-23T14:18:47,561 /tmp/pip-build-env-cw9drjdh/overlay/lib/python3.9/site-packages/setuptools/config/_apply_pyprojecttoml.py:83: SetuptoolsWarning: `install_requires` overwritten in `pyproject.toml` (dependencies) 2024-02-23T14:18:47,561 corresp(dist, value, root_dir) 2024-02-23T14:18:47,822 running dist_info 2024-02-23T14:18:47,828 creating /tmp/pip-modern-metadata-t5jrzees/AMPAL.egg-info 2024-02-23T14:18:47,833 writing /tmp/pip-modern-metadata-t5jrzees/AMPAL.egg-info/PKG-INFO 2024-02-23T14:18:47,837 writing dependency_links to /tmp/pip-modern-metadata-t5jrzees/AMPAL.egg-info/dependency_links.txt 2024-02-23T14:18:47,839 writing requirements to /tmp/pip-modern-metadata-t5jrzees/AMPAL.egg-info/requires.txt 2024-02-23T14:18:47,841 writing top-level names to /tmp/pip-modern-metadata-t5jrzees/AMPAL.egg-info/top_level.txt 2024-02-23T14:18:47,842 writing manifest file '/tmp/pip-modern-metadata-t5jrzees/AMPAL.egg-info/SOURCES.txt' 2024-02-23T14:18:47,867 reading manifest file '/tmp/pip-modern-metadata-t5jrzees/AMPAL.egg-info/SOURCES.txt' 2024-02-23T14:18:47,869 reading manifest template 'MANIFEST.in' 2024-02-23T14:18:47,871 warning: no files found matching 'LICENSE.txt' 2024-02-23T14:18:47,883 adding license file 'LICENSE' 2024-02-23T14:18:47,886 writing manifest file '/tmp/pip-modern-metadata-t5jrzees/AMPAL.egg-info/SOURCES.txt' 2024-02-23T14:18:47,887 creating '/tmp/pip-modern-metadata-t5jrzees/AMPAL-1.5.3.dist-info' 2024-02-23T14:18:48,080 Preparing metadata (pyproject.toml): finished with status 'done' 2024-02-23T14:18:48,087 Source in /tmp/pip-wheel-rohyk2z1/ampal_7901560a38a24fc68badb391afe8b078 has version 1.5.3, which satisfies requirement ampal==1.5.3 from https://files.pythonhosted.org/packages/bc/35/833e1f07e9c31978f56f18db2ccfdd94ba0a5e95d1cce0bb5044aa562012/AMPAL-1.5.3.tar.gz 2024-02-23T14:18:48,088 Removed ampal==1.5.3 from https://files.pythonhosted.org/packages/bc/35/833e1f07e9c31978f56f18db2ccfdd94ba0a5e95d1cce0bb5044aa562012/AMPAL-1.5.3.tar.gz from build tracker '/tmp/pip-build-tracker-wl499lna' 2024-02-23T14:18:48,093 Created temporary directory: /tmp/pip-unpack-07aknxr1 2024-02-23T14:18:48,094 Created temporary directory: /tmp/pip-unpack-h5zkc1yq 2024-02-23T14:18:48,102 Building wheels for collected packages: ampal 2024-02-23T14:18:48,106 Created temporary directory: /tmp/pip-wheel-chqwfjvf 2024-02-23T14:18:48,106 Destination directory: /tmp/pip-wheel-chqwfjvf 2024-02-23T14:18:48,109 Building wheel for ampal (pyproject.toml): started 2024-02-23T14:18:48,110 Running command Building wheel for ampal (pyproject.toml) 2024-02-23T14:18:49,314 /tmp/pip-build-env-cw9drjdh/overlay/lib/python3.9/site-packages/setuptools/config/_apply_pyprojecttoml.py:76: _MissingDynamic: `description` defined outside of `pyproject.toml` is ignored. 2024-02-23T14:18:49,315 !! 2024-02-23T14:18:49,315 ******************************************************************************** 2024-02-23T14:18:49,315 The following seems to be defined outside of `pyproject.toml`: 2024-02-23T14:18:49,315 `description = 'A simple framework for representing biomolecular structure.'` 2024-02-23T14:18:49,316 According to the spec (see the link below), however, setuptools CANNOT 2024-02-23T14:18:49,316 consider this value unless `description` is listed as `dynamic`. 2024-02-23T14:18:49,316 https://packaging.python.org/en/latest/specifications/pyproject-toml/#declaring-project-metadata-the-project-table 2024-02-23T14:18:49,316 To prevent this problem, you can list `description` under `dynamic` or alternatively 2024-02-23T14:18:49,316 remove the `[project]` table from your file and rely entirely on other means of 2024-02-23T14:18:49,316 configuration. 2024-02-23T14:18:49,317 ******************************************************************************** 2024-02-23T14:18:49,317 !! 2024-02-23T14:18:49,317 _handle_missing_dynamic(dist, project_table) 2024-02-23T14:18:49,317 /tmp/pip-build-env-cw9drjdh/overlay/lib/python3.9/site-packages/setuptools/config/_apply_pyprojecttoml.py:76: _MissingDynamic: `authors` defined outside of `pyproject.toml` is ignored. 2024-02-23T14:18:49,317 !! 2024-02-23T14:18:49,317 ******************************************************************************** 2024-02-23T14:18:49,318 The following seems to be defined outside of `pyproject.toml`: 2024-02-23T14:18:49,318 `authors = 'Woolfson Group, University of Bristol'` 2024-02-23T14:18:49,318 According to the spec (see the link below), however, setuptools CANNOT 2024-02-23T14:18:49,318 consider this value unless `authors` is listed as `dynamic`. 2024-02-23T14:18:49,318 https://packaging.python.org/en/latest/specifications/pyproject-toml/#declaring-project-metadata-the-project-table 2024-02-23T14:18:49,319 To prevent this problem, you can list `authors` under `dynamic` or alternatively 2024-02-23T14:18:49,319 remove the `[project]` table from your file and rely entirely on other means of 2024-02-23T14:18:49,319 configuration. 2024-02-23T14:18:49,319 ******************************************************************************** 2024-02-23T14:18:49,319 !! 2024-02-23T14:18:49,319 _handle_missing_dynamic(dist, project_table) 2024-02-23T14:18:49,320 /tmp/pip-build-env-cw9drjdh/overlay/lib/python3.9/site-packages/setuptools/config/_apply_pyprojecttoml.py:76: _MissingDynamic: `classifiers` defined outside of `pyproject.toml` is ignored. 2024-02-23T14:18:49,320 !! 2024-02-23T14:18:49,320 ******************************************************************************** 2024-02-23T14:18:49,320 The following seems to be defined outside of `pyproject.toml`: 2024-02-23T14:18:49,320 `classifiers = ['Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Natural Language :: English', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Programming Language :: Python :: 3.5', 'Programming Language :: Python :: 3.6']` 2024-02-23T14:18:49,321 According to the spec (see the link below), however, setuptools CANNOT 2024-02-23T14:18:49,321 consider this value unless `classifiers` is listed as `dynamic`. 2024-02-23T14:18:49,321 https://packaging.python.org/en/latest/specifications/pyproject-toml/#declaring-project-metadata-the-project-table 2024-02-23T14:18:49,321 To prevent this problem, you can list `classifiers` under `dynamic` or alternatively 2024-02-23T14:18:49,321 remove the `[project]` table from your file and rely entirely on other means of 2024-02-23T14:18:49,321 configuration. 2024-02-23T14:18:49,322 ******************************************************************************** 2024-02-23T14:18:49,322 !! 2024-02-23T14:18:49,322 _handle_missing_dynamic(dist, project_table) 2024-02-23T14:18:49,322 /tmp/pip-build-env-cw9drjdh/overlay/lib/python3.9/site-packages/setuptools/config/_apply_pyprojecttoml.py:83: SetuptoolsWarning: `install_requires` overwritten in `pyproject.toml` (dependencies) 2024-02-23T14:18:49,322 corresp(dist, value, root_dir) 2024-02-23T14:18:49,567 running bdist_wheel 2024-02-23T14:18:49,590 running build 2024-02-23T14:18:49,590 running build_py 2024-02-23T14:18:49,596 creating build 2024-02-23T14:18:49,597 creating build/lib.linux-armv7l-cpython-39 2024-02-23T14:18:49,597 creating build/lib.linux-armv7l-cpython-39/ampal 2024-02-23T14:18:49,598 copying src/ampal/protein.py -> build/lib.linux-armv7l-cpython-39/ampal 2024-02-23T14:18:49,601 copying src/ampal/naccess.py -> build/lib.linux-armv7l-cpython-39/ampal 2024-02-23T14:18:49,603 copying src/ampal/ligands.py -> build/lib.linux-armv7l-cpython-39/ampal 2024-02-23T14:18:49,605 copying src/ampal/amino_acids.py -> build/lib.linux-armv7l-cpython-39/ampal 2024-02-23T14:18:49,608 copying src/ampal/dssp.py -> build/lib.linux-armv7l-cpython-39/ampal 2024-02-23T14:18:49,610 copying src/ampal/align.py -> build/lib.linux-armv7l-cpython-39/ampal 2024-02-23T14:18:49,612 copying src/ampal/pseudo_atoms.py -> build/lib.linux-armv7l-cpython-39/ampal 2024-02-23T14:18:49,615 copying src/ampal/pdb_parser.py -> build/lib.linux-armv7l-cpython-39/ampal 2024-02-23T14:18:49,617 copying src/ampal/assembly.py -> build/lib.linux-armv7l-cpython-39/ampal 2024-02-23T14:18:49,619 copying src/ampal/base_ampal.py -> build/lib.linux-armv7l-cpython-39/ampal 2024-02-23T14:18:49,622 copying src/ampal/interactions.py -> build/lib.linux-armv7l-cpython-39/ampal 2024-02-23T14:18:49,624 copying src/ampal/data.py -> build/lib.linux-armv7l-cpython-39/ampal 2024-02-23T14:18:49,625 copying src/ampal/analyse_protein.py -> build/lib.linux-armv7l-cpython-39/ampal 2024-02-23T14:18:49,628 copying src/ampal/__init__.py -> build/lib.linux-armv7l-cpython-39/ampal 2024-02-23T14:18:49,629 copying src/ampal/nucleic_acid.py -> build/lib.linux-armv7l-cpython-39/ampal 2024-02-23T14:18:49,631 copying src/ampal/ampal_warnings.py -> build/lib.linux-armv7l-cpython-39/ampal 2024-02-23T14:18:49,633 running egg_info 2024-02-23T14:18:49,662 writing src/AMPAL.egg-info/PKG-INFO 2024-02-23T14:18:49,666 writing dependency_links to src/AMPAL.egg-info/dependency_links.txt 2024-02-23T14:18:49,668 writing requirements to src/AMPAL.egg-info/requires.txt 2024-02-23T14:18:49,669 writing top-level names to src/AMPAL.egg-info/top_level.txt 2024-02-23T14:18:49,678 reading manifest file 'src/AMPAL.egg-info/SOURCES.txt' 2024-02-23T14:18:49,681 reading manifest template 'MANIFEST.in' 2024-02-23T14:18:49,682 warning: no files found matching 'LICENSE.txt' 2024-02-23T14:18:49,693 adding license file 'LICENSE' 2024-02-23T14:18:49,696 writing manifest file 'src/AMPAL.egg-info/SOURCES.txt' 2024-02-23T14:18:49,699 /tmp/pip-build-env-cw9drjdh/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'ampal.datafiles' is absent from the `packages` configuration. 2024-02-23T14:18:49,699 !! 2024-02-23T14:18:49,699 ******************************************************************************** 2024-02-23T14:18:49,699 ############################ 2024-02-23T14:18:49,700 # Package would be ignored # 2024-02-23T14:18:49,700 ############################ 2024-02-23T14:18:49,700 Python recognizes 'ampal.datafiles' as an importable package[^1], 2024-02-23T14:18:49,700 but it is absent from setuptools' `packages` configuration. 2024-02-23T14:18:49,700 This leads to an ambiguous overall configuration. If you want to distribute this 2024-02-23T14:18:49,700 package, please make sure that 'ampal.datafiles' is explicitly added 2024-02-23T14:18:49,700 to the `packages` configuration field. 2024-02-23T14:18:49,701 Alternatively, you can also rely on setuptools' discovery methods 2024-02-23T14:18:49,701 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-02-23T14:18:49,701 instead of `find_packages(...)`/`find:`). 2024-02-23T14:18:49,701 You can read more about "package discovery" on setuptools documentation page: 2024-02-23T14:18:49,701 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-02-23T14:18:49,702 If you don't want 'ampal.datafiles' to be distributed and are 2024-02-23T14:18:49,702 already explicitly excluding 'ampal.datafiles' via 2024-02-23T14:18:49,702 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-02-23T14:18:49,702 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-02-23T14:18:49,702 combination with a more fine grained `package-data` configuration. 2024-02-23T14:18:49,702 You can read more about "package data files" on setuptools documentation page: 2024-02-23T14:18:49,703 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-02-23T14:18:49,703 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-02-23T14:18:49,703 even if it does not contain any `.py` files. 2024-02-23T14:18:49,703 On the other hand, currently there is no concept of package data 2024-02-23T14:18:49,703 directory, all directories are treated like packages. 2024-02-23T14:18:49,703 ******************************************************************************** 2024-02-23T14:18:49,704 !! 2024-02-23T14:18:49,704 check.warn(importable) 2024-02-23T14:18:49,704 copying src/ampal/geometry.c -> build/lib.linux-armv7l-cpython-39/ampal 2024-02-23T14:18:49,737 copying src/ampal/geometry.pyx -> build/lib.linux-armv7l-cpython-39/ampal 2024-02-23T14:18:49,740 creating build/lib.linux-armv7l-cpython-39/ampal/datafiles 2024-02-23T14:18:49,741 copying src/ampal/datafiles/amino_acids.json -> build/lib.linux-armv7l-cpython-39/ampal/datafiles 2024-02-23T14:18:49,745 copying src/ampal/datafiles/chemical_elements.json -> build/lib.linux-armv7l-cpython-39/ampal/datafiles 2024-02-23T14:18:49,749 copying src/ampal/datafiles/pdb_atom_column_format.json -> build/lib.linux-armv7l-cpython-39/ampal/datafiles 2024-02-23T14:18:49,754 running build_ext 2024-02-23T14:18:49,760 building 'ampal.geometry' extension 2024-02-23T14:18:49,761 creating build/temp.linux-armv7l-cpython-39 2024-02-23T14:18:49,761 creating build/temp.linux-armv7l-cpython-39/src 2024-02-23T14:18:49,762 creating build/temp.linux-armv7l-cpython-39/src/ampal 2024-02-23T14:18:49,763 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.9 -c src/ampal/geometry.c -o build/temp.linux-armv7l-cpython-39/src/ampal/geometry.o 2024-02-23T14:18:53,590 src/ampal/geometry.c:7370:18: warning: ‘__pyx_f_5ampal_8geometry__unit_vector’ defined but not used [-Wunused-function] 2024-02-23T14:18:53,591 7370 | static PyObject *__pyx_f_5ampal_8geometry__unit_vector(double *__pyx_v_a) { 2024-02-23T14:18:53,591 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-02-23T14:18:53,594 src/ampal/geometry.c:6449:15: warning: ‘__pyx_f_5ampal_8geometry__dot_product_2d’ defined but not used [-Wunused-function] 2024-02-23T14:18:53,594 6449 | static double __pyx_f_5ampal_8geometry__dot_product_2d(double *__pyx_v_a, double *__pyx_v_b) { 2024-02-23T14:18:53,594 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-02-23T14:20:13,218 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/src/ampal/geometry.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/ampal/geometry.cpython-39-arm-linux-gnueabihf.so 2024-02-23T14:20:13,468 installing to build/bdist.linux-armv7l/wheel 2024-02-23T14:20:13,469 running install 2024-02-23T14:20:13,494 running install_lib 2024-02-23T14:20:13,500 creating build/bdist.linux-armv7l 2024-02-23T14:20:13,501 creating build/bdist.linux-armv7l/wheel 2024-02-23T14:20:13,503 creating build/bdist.linux-armv7l/wheel/ampal 2024-02-23T14:20:13,505 copying build/lib.linux-armv7l-cpython-39/ampal/protein.py -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T14:20:13,511 copying build/lib.linux-armv7l-cpython-39/ampal/naccess.py -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T14:20:13,515 copying build/lib.linux-armv7l-cpython-39/ampal/ligands.py -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T14:20:13,518 copying build/lib.linux-armv7l-cpython-39/ampal/amino_acids.py -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T14:20:13,522 copying build/lib.linux-armv7l-cpython-39/ampal/geometry.pyx -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T14:20:13,530 copying build/lib.linux-armv7l-cpython-39/ampal/geometry.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T14:20:13,607 copying build/lib.linux-armv7l-cpython-39/ampal/dssp.py -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T14:20:13,609 copying build/lib.linux-armv7l-cpython-39/ampal/geometry.c -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T14:20:13,648 copying build/lib.linux-armv7l-cpython-39/ampal/align.py -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T14:20:13,651 copying build/lib.linux-armv7l-cpython-39/ampal/pseudo_atoms.py -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T14:20:13,653 copying build/lib.linux-armv7l-cpython-39/ampal/pdb_parser.py -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T14:20:13,656 copying build/lib.linux-armv7l-cpython-39/ampal/assembly.py -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T14:20:13,658 copying build/lib.linux-armv7l-cpython-39/ampal/base_ampal.py -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T14:20:13,661 copying build/lib.linux-armv7l-cpython-39/ampal/interactions.py -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T14:20:13,664 copying build/lib.linux-armv7l-cpython-39/ampal/data.py -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T14:20:13,666 copying build/lib.linux-armv7l-cpython-39/ampal/analyse_protein.py -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T14:20:13,668 copying build/lib.linux-armv7l-cpython-39/ampal/__init__.py -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T14:20:13,670 copying build/lib.linux-armv7l-cpython-39/ampal/nucleic_acid.py -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T14:20:13,672 copying build/lib.linux-armv7l-cpython-39/ampal/ampal_warnings.py -> build/bdist.linux-armv7l/wheel/ampal 2024-02-23T14:20:13,674 creating build/bdist.linux-armv7l/wheel/ampal/datafiles 2024-02-23T14:20:13,675 copying build/lib.linux-armv7l-cpython-39/ampal/datafiles/pdb_atom_column_format.json -> build/bdist.linux-armv7l/wheel/ampal/datafiles 2024-02-23T14:20:13,679 copying build/lib.linux-armv7l-cpython-39/ampal/datafiles/chemical_elements.json -> build/bdist.linux-armv7l/wheel/ampal/datafiles 2024-02-23T14:20:13,682 copying build/lib.linux-armv7l-cpython-39/ampal/datafiles/amino_acids.json -> build/bdist.linux-armv7l/wheel/ampal/datafiles 2024-02-23T14:20:13,685 running install_egg_info 2024-02-23T14:20:13,690 Copying src/AMPAL.egg-info to build/bdist.linux-armv7l/wheel/AMPAL-1.5.3-py3.9.egg-info 2024-02-23T14:20:13,702 running install_scripts 2024-02-23T14:20:13,746 creating build/bdist.linux-armv7l/wheel/AMPAL-1.5.3.dist-info/WHEEL 2024-02-23T14:20:13,749 creating '/tmp/pip-wheel-chqwfjvf/.tmp-vi8sv4y4/AMPAL-1.5.3-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-02-23T14:20:13,753 adding 'ampal/__init__.py' 2024-02-23T14:20:13,754 adding 'ampal/align.py' 2024-02-23T14:20:13,757 adding 'ampal/amino_acids.py' 2024-02-23T14:20:13,758 adding 'ampal/ampal_warnings.py' 2024-02-23T14:20:13,762 adding 'ampal/analyse_protein.py' 2024-02-23T14:20:13,764 adding 'ampal/assembly.py' 2024-02-23T14:20:13,768 adding 'ampal/base_ampal.py' 2024-02-23T14:20:13,769 adding 'ampal/data.py' 2024-02-23T14:20:13,771 adding 'ampal/dssp.py' 2024-02-23T14:20:13,905 adding 'ampal/geometry.c' 2024-02-23T14:20:14,422 adding 'ampal/geometry.cpython-39-arm-linux-gnueabihf.so' 2024-02-23T14:20:14,445 adding 'ampal/geometry.pyx' 2024-02-23T14:20:14,447 adding 'ampal/interactions.py' 2024-02-23T14:20:14,449 adding 'ampal/ligands.py' 2024-02-23T14:20:14,450 adding 'ampal/naccess.py' 2024-02-23T14:20:14,452 adding 'ampal/nucleic_acid.py' 2024-02-23T14:20:14,454 adding 'ampal/pdb_parser.py' 2024-02-23T14:20:14,459 adding 'ampal/protein.py' 2024-02-23T14:20:14,461 adding 'ampal/pseudo_atoms.py' 2024-02-23T14:20:14,469 adding 'ampal/datafiles/amino_acids.json' 2024-02-23T14:20:14,473 adding 'ampal/datafiles/chemical_elements.json' 2024-02-23T14:20:14,491 adding 'ampal/datafiles/pdb_atom_column_format.json' 2024-02-23T14:20:14,493 adding 'AMPAL-1.5.3.dist-info/LICENSE' 2024-02-23T14:20:14,494 adding 'AMPAL-1.5.3.dist-info/METADATA' 2024-02-23T14:20:14,495 adding 'AMPAL-1.5.3.dist-info/WHEEL' 2024-02-23T14:20:14,496 adding 'AMPAL-1.5.3.dist-info/top_level.txt' 2024-02-23T14:20:14,497 adding 'AMPAL-1.5.3.dist-info/RECORD' 2024-02-23T14:20:14,512 removing build/bdist.linux-armv7l/wheel 2024-02-23T14:20:14,665 Building wheel for ampal (pyproject.toml): finished with status 'done' 2024-02-23T14:20:14,694 Created wheel for ampal: filename=AMPAL-1.5.3-cp39-cp39-linux_armv7l.whl size=1302338 sha256=240e63282cc8ca6903ed71b8a3bbc369afafb852439fd392815560557fcfc5bd 2024-02-23T14:20:14,695 Stored in directory: /tmp/pip-ephem-wheel-cache-lznz97ys/wheels/e5/ad/9e/778cf21c7aa40b35adb3709c10188140b887351136d019bd4a 2024-02-23T14:20:14,710 Successfully built ampal 2024-02-23T14:20:14,741 Removed build tracker: '/tmp/pip-build-tracker-wl499lna'