2024-02-23T16:54:27,608 Created temporary directory: /tmp/pip-build-tracker-bdwmqo6x
2024-02-23T16:54:27,609 Initialized build tracking at /tmp/pip-build-tracker-bdwmqo6x
2024-02-23T16:54:27,609 Created build tracker: /tmp/pip-build-tracker-bdwmqo6x
2024-02-23T16:54:27,610 Entered build tracker: /tmp/pip-build-tracker-bdwmqo6x
2024-02-23T16:54:27,611 Created temporary directory: /tmp/pip-wheel-6zzwo69s
2024-02-23T16:54:27,614 Created temporary directory: /tmp/pip-ephem-wheel-cache-iy0d6ykt
2024-02-23T16:54:27,635 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-02-23T16:54:27,639 2 location(s) to search for versions of ukat:
2024-02-23T16:54:27,639 * https://pypi.org/simple/ukat/
2024-02-23T16:54:27,639 * https://www.piwheels.org/simple/ukat/
2024-02-23T16:54:27,639 Fetching project page and analyzing links: https://pypi.org/simple/ukat/
2024-02-23T16:54:27,640 Getting page https://pypi.org/simple/ukat/
2024-02-23T16:54:27,642 Found index url https://pypi.org/simple/
2024-02-23T16:54:27,861 Fetched page https://pypi.org/simple/ukat/ as application/vnd.pypi.simple.v1+json
2024-02-23T16:54:27,866   Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/e2/17/e636a5c965c555fb1b44799974932f6a017c92e4fcdc9219c48fc786d31d/ukat-0.2.2-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4)
2024-02-23T16:54:27,868   Found link https://files.pythonhosted.org/packages/22/53/a958fc50ec0ebefd577a91de3a8aef339e2031cc4c23eb2c9fcac30d1d61/ukat-0.2.2.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.2.2
2024-02-23T16:54:27,868   Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/97/e2/f46b3aaaf3868bb93d8bbe0e978f4e357985cd266d8ad07af798148eb947/ukat-0.3.0rc1-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4)
2024-02-23T16:54:27,869   Found link https://files.pythonhosted.org/packages/9f/f4/3ea611a5facc3bf586f9f6e25254b5be789e0eb3fee9ee900095566d6b8d/ukat-0.3.0rc1.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.3.0rc1
2024-02-23T16:54:27,870   Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/07/18/55b4246dcf95f9adf756e8b33f7f35ebd610860ae2a390b6a2903ec8ba67/ukat-0.3.0rc2-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4)
2024-02-23T16:54:27,871   Found link https://files.pythonhosted.org/packages/87/c0/b51d733d00dfa0374ccdf51ef00fc37a4f287716d35296420caadcb201ab/ukat-0.3.0rc2.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.3.0rc2
2024-02-23T16:54:27,872   Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/75/3e/d5efff7dadb6aa91c239b7a8fe50f2f9290ef83c7f0a5aa7a61294e9e46e/ukat-0.3.0-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4)
2024-02-23T16:54:27,873   Found link https://files.pythonhosted.org/packages/c9/7c/60d85dfa350e8b06deb7ad6304eae25b6546541dadce2f15677f034f477f/ukat-0.3.0.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.3.0
2024-02-23T16:54:27,874   Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/00/18/6a5221095c9bb0d6e168185eefca2e6af00d4f8e4f76c4337998cd780fa2/ukat-0.4.0-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4)
2024-02-23T16:54:27,875   Found link https://files.pythonhosted.org/packages/c7/ff/bc77453bf46cc5184dbbf5b840243a0ae0941dc410a1d03b063d79aafb06/ukat-0.4.0.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.6, <4), version: 0.4.0
2024-02-23T16:54:27,875   Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/49/f0/71b5c598d65f94ae4679d0dd9289610c9667ae5c652b47246df61a861f80/ukat-0.5.0-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.7, <4)
2024-02-23T16:54:27,876   Found link https://files.pythonhosted.org/packages/09/e0/d0bc4a72616c3147123a42f0f2df3d70f5c913f83e93a585818f5a3e485d/ukat-0.5.0.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.7, <4), version: 0.5.0
2024-02-23T16:54:27,877   Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/75/2c/2a0af3be5b46d79ec35ddd9961662ecb9b5f501bbf5215bc4e7a6064b5bd/ukat-0.6.0-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.7, <4)
2024-02-23T16:54:27,878   Found link https://files.pythonhosted.org/packages/e7/60/e74811775704c302673cd28b3669efdbcb5cd35780d89c5b18069cdb387a/ukat-0.6.0.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.7, <4), version: 0.6.0
2024-02-23T16:54:27,879   Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/4b/22/cc8a211608efaad7ee71fa6409ec13fc59ed8edf4c7d2d1a06dd2d70e036/ukat-0.6.1-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4)
2024-02-23T16:54:27,880   Found link https://files.pythonhosted.org/packages/df/4b/9a3ab2bfa9ef5988e590b5ee6b31b18eab33a4ecc3c8aed091c6add6aacd/ukat-0.6.1.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4), version: 0.6.1
2024-02-23T16:54:27,880   Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/be/62/a915276e1511bc65a0dc4180ef170962967e6f972c58a57a64e3ad0474e0/ukat-0.6.2-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4)
2024-02-23T16:54:27,881   Found link https://files.pythonhosted.org/packages/ff/2a/19315dfeeebb202d6761e86e70a87752435eefd0b5d642b690629b64f704/ukat-0.6.2.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4), version: 0.6.2
2024-02-23T16:54:27,882   Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/9c/71/e782f90624fa37a2d6c14a03f8fa69bac8e724c7b0e34b547a4969bc98fb/ukat-0.6.3-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4)
2024-02-23T16:54:27,883   Found link https://files.pythonhosted.org/packages/4f/02/8b2f31c2be7d67a0d682629ed6cf9715855f729a6cc80d71af2821d0345d/ukat-0.6.3.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4), version: 0.6.3
2024-02-23T16:54:27,884   Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/32/1a/f0534c14ceec33bfd8193b3f6b012db9c342757766e8890adf1970f2fd1b/ukat-0.6.4-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4)
2024-02-23T16:54:27,885   Found link https://files.pythonhosted.org/packages/e3/40/86a511bc0a0b9c1de877fe30e3a2a8a760bc97d111c065e0fedea435f2d0/ukat-0.6.4.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4), version: 0.6.4
2024-02-23T16:54:27,885   Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/f0/e2/dadfa3620b6febf2c497470fbe27c6347bea3a28df3304040f6909750c07/ukat-0.6.5-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4)
2024-02-23T16:54:27,886   Found link https://files.pythonhosted.org/packages/ed/b7/9382a687dda7fc40a414bb2c8451459921af78da1d232ad4deb9477077cd/ukat-0.6.5.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4), version: 0.6.5
2024-02-23T16:54:27,887   Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/4c/83/45ee3964041d87898130cc8ac7e2fce356fdfa261b79778e8a46dfb674e2/ukat-0.7.0-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4)
2024-02-23T16:54:27,888   Found link https://files.pythonhosted.org/packages/e4/8d/e33039e61e7e224ff6a164119d764dcf2def3f76181e9b7802871bc88849/ukat-0.7.0.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4), version: 0.7.0
2024-02-23T16:54:27,888   Skipping link: No binaries permitted for ukat: https://files.pythonhosted.org/packages/27/6c/1c50965a961a9b2f4468786b1d232376e7c79ed6b610311e53b2c1b93876/ukat-0.7.1-py3-none-any.whl (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4)
2024-02-23T16:54:27,889   Found link https://files.pythonhosted.org/packages/63/32/07599bf522ab56a52434f8be5fbef392908b15e7646f0f0068196faffde8/ukat-0.7.1.tar.gz (from https://pypi.org/simple/ukat/) (requires-python:>=3.8, <4), version: 0.7.1
2024-02-23T16:54:27,890 Fetching project page and analyzing links: https://www.piwheels.org/simple/ukat/
2024-02-23T16:54:27,891 Getting page https://www.piwheels.org/simple/ukat/
2024-02-23T16:54:27,892 Found index url https://www.piwheels.org/simple/
2024-02-23T16:54:32,241 Fetched page https://www.piwheels.org/simple/ukat/ as text/html
2024-02-23T16:54:32,252   Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.7.0-py3-none-any.whl#sha256=0b9e53fa4cf8f414352932c0314514ec12c48d386396aa1e43bb7a00a6e991ad (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.8, <4)
2024-02-23T16:54:32,253   Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.6.5-py3-none-any.whl#sha256=686daac8761ca477949cfeb3ac3c31c36a3aab6fe277893c09dccdfe04d25f0f (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.8, <4)
2024-02-23T16:54:32,254   Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.6.4-py3-none-any.whl#sha256=5009f9a41fa9e635b2b381e49387fbc0ebee0d9222ac9cb78f9e6ebeff8fc226 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.8, <4)
2024-02-23T16:54:32,254   Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.6.3-py3-none-any.whl#sha256=5ddc013291e2d74f3f64a22c888c300cdabbc893b6cf514d4c7bf97df8be14a6 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.8, <4)
2024-02-23T16:54:32,255   Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.6.2-py3-none-any.whl#sha256=a831cd11993de2b4c1c722e0294a13bb3e6d1da09b5ebe3c300307759d10cf02 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.8, <4)
2024-02-23T16:54:32,256   Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.6.1-py3-none-any.whl#sha256=7d16a51c8a1b641c0e66a07b621739800aeee67a63bca23aae04440ea692a180 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.8, <4)
2024-02-23T16:54:32,257   Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.6.0-py3-none-any.whl#sha256=78508823e1a39cce9fafca7bf4ffafbb572a5e42dcaf146988e55f7baba8b6d9 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.7, <4)
2024-02-23T16:54:32,258   Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.5.0-py3-none-any.whl#sha256=9e0351fe436360177b7b038d5bf70ed992a0bdeba76f9fb2208a78e6d2660e9a (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.7, <4)
2024-02-23T16:54:32,259   Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.4.0-py3-none-any.whl#sha256=4439c434b8639dfd1a636d19d1e1ffabd28bebee6dfb40517215a1f794dd2e4f (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4)
2024-02-23T16:54:32,260   Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.3.0-py3-none-any.whl#sha256=86022839d769d6086bb361a5b243063582b7f1a9c5a3a48dabd57d74c9777832 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4)
2024-02-23T16:54:32,261   Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.3.0rc2-py3-none-any.whl#sha256=3c5b41e81cd4a6ca5e350db15e9f750e78fe1f480545fb2d403cdfcbe8047fc9 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4)
2024-02-23T16:54:32,262   Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.3.0rc1-py3-none-any.whl#sha256=cc765ecd35f48365da5fc3ab75b324011d33ec523fd325bf72715951ea5e1140 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4)
2024-02-23T16:54:32,263   Skipping link: No binaries permitted for ukat: https://www.piwheels.org/simple/ukat/ukat-0.2.2-py3-none-any.whl#sha256=a15e3619c507894ee5d4801e5f059fbb21c89d110b6eaf5c7ec385d98cfc3f05 (from https://www.piwheels.org/simple/ukat/) (requires-python:>=3.6, <4)
2024-02-23T16:54:32,264 Skipping link: not a file: https://www.piwheels.org/simple/ukat/
2024-02-23T16:54:32,266 Skipping link: not a file: https://pypi.org/simple/ukat/
2024-02-23T16:54:32,309 Given no hashes to check 1 links for project 'ukat': discarding no candidates
2024-02-23T16:54:32,338 Collecting ukat==0.7.1
2024-02-23T16:54:32,341   Created temporary directory: /tmp/pip-unpack-vgrkfmk5
2024-02-23T16:54:32,579   Downloading ukat-0.7.1.tar.gz (82 kB)
2024-02-23T16:54:32,774   Added ukat==0.7.1 from https://files.pythonhosted.org/packages/63/32/07599bf522ab56a52434f8be5fbef392908b15e7646f0f0068196faffde8/ukat-0.7.1.tar.gz to build tracker '/tmp/pip-build-tracker-bdwmqo6x'
2024-02-23T16:54:32,775   Running setup.py (path:/tmp/pip-wheel-6zzwo69s/ukat_af01e88b96b34730a751f46830477ad6/setup.py) egg_info for package ukat
2024-02-23T16:54:32,776   Created temporary directory: /tmp/pip-pip-egg-info-wybfd0u1
2024-02-23T16:54:32,777   Preparing metadata (setup.py): started
2024-02-23T16:54:32,778   Running command python setup.py egg_info
2024-02-23T16:54:33,817   running egg_info
2024-02-23T16:54:33,818   creating /tmp/pip-pip-egg-info-wybfd0u1/ukat.egg-info
2024-02-23T16:54:33,843   writing /tmp/pip-pip-egg-info-wybfd0u1/ukat.egg-info/PKG-INFO
2024-02-23T16:54:33,847   writing dependency_links to /tmp/pip-pip-egg-info-wybfd0u1/ukat.egg-info/dependency_links.txt
2024-02-23T16:54:33,849   writing requirements to /tmp/pip-pip-egg-info-wybfd0u1/ukat.egg-info/requires.txt
2024-02-23T16:54:33,850   writing top-level names to /tmp/pip-pip-egg-info-wybfd0u1/ukat.egg-info/top_level.txt
2024-02-23T16:54:33,852   writing manifest file '/tmp/pip-pip-egg-info-wybfd0u1/ukat.egg-info/SOURCES.txt'
2024-02-23T16:54:33,945   reading manifest file '/tmp/pip-pip-egg-info-wybfd0u1/ukat.egg-info/SOURCES.txt'
2024-02-23T16:54:33,946   reading manifest template 'MANIFEST.in'
2024-02-23T16:54:33,958   warning: no previously-included files matching '__pycache__' found anywhere in distribution
2024-02-23T16:54:33,959   no previously-included directories found matching 'doc'
2024-02-23T16:54:33,959   no previously-included directories found matching 'experiments'
2024-02-23T16:54:33,960   adding license file 'LICENSE'
2024-02-23T16:54:33,962   writing manifest file '/tmp/pip-pip-egg-info-wybfd0u1/ukat.egg-info/SOURCES.txt'
2024-02-23T16:54:34,070   Preparing metadata (setup.py): finished with status 'done'
2024-02-23T16:54:34,074   Source in /tmp/pip-wheel-6zzwo69s/ukat_af01e88b96b34730a751f46830477ad6 has version 0.7.1, which satisfies requirement ukat==0.7.1 from https://files.pythonhosted.org/packages/63/32/07599bf522ab56a52434f8be5fbef392908b15e7646f0f0068196faffde8/ukat-0.7.1.tar.gz
2024-02-23T16:54:34,075   Removed ukat==0.7.1 from https://files.pythonhosted.org/packages/63/32/07599bf522ab56a52434f8be5fbef392908b15e7646f0f0068196faffde8/ukat-0.7.1.tar.gz from build tracker '/tmp/pip-build-tracker-bdwmqo6x'
2024-02-23T16:54:34,082 Created temporary directory: /tmp/pip-unpack-b1m50poz
2024-02-23T16:54:34,083 Created temporary directory: /tmp/pip-unpack-_9lcajmq
2024-02-23T16:54:34,102 Building wheels for collected packages: ukat
2024-02-23T16:54:34,106   Created temporary directory: /tmp/pip-wheel-wxm6gphv
2024-02-23T16:54:34,107   Building wheel for ukat (setup.py): started
2024-02-23T16:54:34,108   Destination directory: /tmp/pip-wheel-wxm6gphv
2024-02-23T16:54:34,108   Running command python setup.py bdist_wheel
2024-02-23T16:54:35,097   running bdist_wheel
2024-02-23T16:54:35,188   running build
2024-02-23T16:54:35,189   running build_py
2024-02-23T16:54:35,215   creating build
2024-02-23T16:54:35,215   creating build/lib
2024-02-23T16:54:35,216   creating build/lib/ukat
2024-02-23T16:54:35,217   copying ukat/__init__.py -> build/lib/ukat
2024-02-23T16:54:35,219   creating build/lib/ukat/vessels
2024-02-23T16:54:35,220   copying ukat/vessels/phase_contrast.py -> build/lib/ukat/vessels
2024-02-23T16:54:35,223   copying ukat/vessels/__init__.py -> build/lib/ukat/vessels
2024-02-23T16:54:35,225   creating build/lib/ukat/mapping
2024-02-23T16:54:35,226   copying ukat/mapping/t2.py -> build/lib/ukat/mapping
2024-02-23T16:54:35,228   copying ukat/mapping/t2_stimfit.py -> build/lib/ukat/mapping
2024-02-23T16:54:35,231   copying ukat/mapping/t1.py -> build/lib/ukat/mapping
2024-02-23T16:54:35,233   copying ukat/mapping/t2star.py -> build/lib/ukat/mapping
2024-02-23T16:54:35,235   copying ukat/mapping/__init__.py -> build/lib/ukat/mapping
2024-02-23T16:54:35,237   copying ukat/mapping/diffusion.py -> build/lib/ukat/mapping
2024-02-23T16:54:35,239   copying ukat/mapping/b0.py -> build/lib/ukat/mapping
2024-02-23T16:54:35,241   copying ukat/mapping/mtr.py -> build/lib/ukat/mapping
2024-02-23T16:54:35,243   creating build/lib/ukat/qa
2024-02-23T16:54:35,244   copying ukat/qa/__init__.py -> build/lib/ukat/qa
2024-02-23T16:54:35,246   copying ukat/qa/snr.py -> build/lib/ukat/qa
2024-02-23T16:54:35,248   creating build/lib/ukat/segmentation
2024-02-23T16:54:35,249   copying ukat/segmentation/whole_kidney.py -> build/lib/ukat/segmentation
2024-02-23T16:54:35,251   copying ukat/segmentation/__init__.py -> build/lib/ukat/segmentation
2024-02-23T16:54:35,253   creating build/lib/ukat/utils
2024-02-23T16:54:35,254   copying ukat/utils/arraystats.py -> build/lib/ukat/utils
2024-02-23T16:54:35,256   copying ukat/utils/tools.py -> build/lib/ukat/utils
2024-02-23T16:54:35,258   copying ukat/utils/ge.py -> build/lib/ukat/utils
2024-02-23T16:54:35,259   copying ukat/utils/__init__.py -> build/lib/ukat/utils
2024-02-23T16:54:35,261   copying ukat/utils/siemens.py -> build/lib/ukat/utils
2024-02-23T16:54:35,263   creating build/lib/ukat/data
2024-02-23T16:54:35,264   copying ukat/data/fetch.py -> build/lib/ukat/data
2024-02-23T16:54:35,267   copying ukat/data/__init__.py -> build/lib/ukat/data
2024-02-23T16:54:35,269   creating build/lib/ukat/vessels/tests
2024-02-23T16:54:35,270   copying ukat/vessels/tests/__init__.py -> build/lib/ukat/vessels/tests
2024-02-23T16:54:35,272   copying ukat/vessels/tests/test_phase_contrast.py -> build/lib/ukat/vessels/tests
2024-02-23T16:54:35,274   creating build/lib/ukat/mapping/tests
2024-02-23T16:54:35,275   copying ukat/mapping/tests/test_mtr.py -> build/lib/ukat/mapping/tests
2024-02-23T16:54:35,277   copying ukat/mapping/tests/test_t1.py -> build/lib/ukat/mapping/tests
2024-02-23T16:54:35,280   copying ukat/mapping/tests/test_t2_stimfit.py -> build/lib/ukat/mapping/tests
2024-02-23T16:54:35,282   copying ukat/mapping/tests/__init__.py -> build/lib/ukat/mapping/tests
2024-02-23T16:54:35,284   copying ukat/mapping/tests/test_t2.py -> build/lib/ukat/mapping/tests
2024-02-23T16:54:35,286   copying ukat/mapping/tests/test_diffusion.py -> build/lib/ukat/mapping/tests
2024-02-23T16:54:35,288   copying ukat/mapping/tests/test_t2star.py -> build/lib/ukat/mapping/tests
2024-02-23T16:54:35,290   copying ukat/mapping/tests/test_b0.py -> build/lib/ukat/mapping/tests
2024-02-23T16:54:35,293   creating build/lib/ukat/mapping/fitting
2024-02-23T16:54:35,294   copying ukat/mapping/fitting/relaxation.py -> build/lib/ukat/mapping/fitting
2024-02-23T16:54:35,296   copying ukat/mapping/fitting/__init__.py -> build/lib/ukat/mapping/fitting
2024-02-23T16:54:35,298   creating build/lib/ukat/mapping/fitting/tests
2024-02-23T16:54:35,299   copying ukat/mapping/fitting/tests/__init__.py -> build/lib/ukat/mapping/fitting/tests
2024-02-23T16:54:35,301   copying ukat/mapping/fitting/tests/test_relaxation.py -> build/lib/ukat/mapping/fitting/tests
2024-02-23T16:54:35,303   creating build/lib/ukat/qa/tests
2024-02-23T16:54:35,304   copying ukat/qa/tests/test_snr.py -> build/lib/ukat/qa/tests
2024-02-23T16:54:35,306   copying ukat/qa/tests/__init__.py -> build/lib/ukat/qa/tests
2024-02-23T16:54:35,308   creating build/lib/ukat/segmentation/tests
2024-02-23T16:54:35,309   copying ukat/segmentation/tests/test_whole_kidney.py -> build/lib/ukat/segmentation/tests
2024-02-23T16:54:35,311   copying ukat/segmentation/tests/__init__.py -> build/lib/ukat/segmentation/tests
2024-02-23T16:54:35,313   creating build/lib/ukat/utils/tests
2024-02-23T16:54:35,314   copying ukat/utils/tests/test_arraystats.py -> build/lib/ukat/utils/tests
2024-02-23T16:54:35,317   copying ukat/utils/tests/__init__.py -> build/lib/ukat/utils/tests
2024-02-23T16:54:35,318   copying ukat/utils/tests/test_ge.py -> build/lib/ukat/utils/tests
2024-02-23T16:54:35,320   copying ukat/utils/tests/test_siemens.py -> build/lib/ukat/utils/tests
2024-02-23T16:54:35,321   copying ukat/utils/tests/test_tools.py -> build/lib/ukat/utils/tests
2024-02-23T16:54:35,324   creating build/lib/ukat/data/tests
2024-02-23T16:54:35,324   copying ukat/data/tests/test_fetch.py -> build/lib/ukat/data/tests
2024-02-23T16:54:35,327   copying ukat/data/tests/__init__.py -> build/lib/ukat/data/tests
2024-02-23T16:54:35,328   running egg_info
2024-02-23T16:54:35,381   writing ukat.egg-info/PKG-INFO
2024-02-23T16:54:35,385   writing dependency_links to ukat.egg-info/dependency_links.txt
2024-02-23T16:54:35,386   writing requirements to ukat.egg-info/requires.txt
2024-02-23T16:54:35,387   writing top-level names to ukat.egg-info/top_level.txt
2024-02-23T16:54:35,423   reading manifest file 'ukat.egg-info/SOURCES.txt'
2024-02-23T16:54:35,425   reading manifest template 'MANIFEST.in'
2024-02-23T16:54:35,448   warning: no previously-included files matching '__pycache__' found anywhere in distribution
2024-02-23T16:54:35,448   no previously-included directories found matching 'doc'
2024-02-23T16:54:35,449   no previously-included directories found matching 'experiments'
2024-02-23T16:54:35,449   adding license file 'LICENSE'
2024-02-23T16:54:35,453   writing manifest file 'ukat.egg-info/SOURCES.txt'
2024-02-23T16:54:35,455   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'ukat.utils.tests.test_data' is absent from the `packages` configuration.
2024-02-23T16:54:35,456   !!

2024-02-23T16:54:35,457           ********************************************************************************
2024-02-23T16:54:35,457           ############################
2024-02-23T16:54:35,458           # Package would be ignored #
2024-02-23T16:54:35,458           ############################
2024-02-23T16:54:35,459           Python recognizes 'ukat.utils.tests.test_data' as an importable package[^1],
2024-02-23T16:54:35,459           but it is absent from setuptools' `packages` configuration.

2024-02-23T16:54:35,460           This leads to an ambiguous overall configuration. If you want to distribute this
2024-02-23T16:54:35,461           package, please make sure that 'ukat.utils.tests.test_data' is explicitly added
2024-02-23T16:54:35,461           to the `packages` configuration field.

2024-02-23T16:54:35,462           Alternatively, you can also rely on setuptools' discovery methods
2024-02-23T16:54:35,463           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-02-23T16:54:35,463           instead of `find_packages(...)`/`find:`).

2024-02-23T16:54:35,464           You can read more about "package discovery" on setuptools documentation page:

2024-02-23T16:54:35,465           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-02-23T16:54:35,466           If you don't want 'ukat.utils.tests.test_data' to be distributed and are
2024-02-23T16:54:35,467           already explicitly excluding 'ukat.utils.tests.test_data' via
2024-02-23T16:54:35,467           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-02-23T16:54:35,467           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-02-23T16:54:35,468           combination with a more fine grained `package-data` configuration.

2024-02-23T16:54:35,469           You can read more about "package data files" on setuptools documentation page:

2024-02-23T16:54:35,470           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-02-23T16:54:35,472           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-02-23T16:54:35,472                 even if it does not contain any `.py` files.
2024-02-23T16:54:35,473                 On the other hand, currently there is no concept of package data
2024-02-23T16:54:35,473                 directory, all directories are treated like packages.
2024-02-23T16:54:35,474           ********************************************************************************

2024-02-23T16:54:35,474   !!
2024-02-23T16:54:35,475     check.warn(importable)
2024-02-23T16:54:35,475   creating build/lib/ukat/utils/tests/test_data
2024-02-23T16:54:35,476   copying ukat/utils/tests/test_data/diffusion_scheme.txt -> build/lib/ukat/utils/tests/test_data
2024-02-23T16:54:35,476   copying ukat/utils/tests/test_data/expected_from_str.dvs -> build/lib/ukat/utils/tests/test_data
2024-02-23T16:54:35,476   copying ukat/utils/tests/test_data/expected_from_txt.dvs -> build/lib/ukat/utils/tests/test_data
2024-02-23T16:54:35,503   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2024-02-23T16:54:35,503   !!

2024-02-23T16:54:35,504           ********************************************************************************
2024-02-23T16:54:35,505           Please avoid running ``setup.py`` directly.
2024-02-23T16:54:35,505           Instead, use pypa/build, pypa/installer or other
2024-02-23T16:54:35,506           standards-based tools.

2024-02-23T16:54:35,507           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2024-02-23T16:54:35,507           ********************************************************************************

2024-02-23T16:54:35,508   !!
2024-02-23T16:54:35,509     self.initialize_options()
2024-02-23T16:54:35,528   installing to build/bdist.linux-armv7l/wheel
2024-02-23T16:54:35,529   running install
2024-02-23T16:54:35,554   running install_lib
2024-02-23T16:54:35,578   creating build/bdist.linux-armv7l
2024-02-23T16:54:35,579   creating build/bdist.linux-armv7l/wheel
2024-02-23T16:54:35,580   creating build/bdist.linux-armv7l/wheel/ukat
2024-02-23T16:54:35,581   creating build/bdist.linux-armv7l/wheel/ukat/vessels
2024-02-23T16:54:35,582   creating build/bdist.linux-armv7l/wheel/ukat/vessels/tests
2024-02-23T16:54:35,583   copying build/lib/ukat/vessels/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/vessels/tests
2024-02-23T16:54:35,585   copying build/lib/ukat/vessels/tests/test_phase_contrast.py -> build/bdist.linux-armv7l/wheel/ukat/vessels/tests
2024-02-23T16:54:35,587   copying build/lib/ukat/vessels/phase_contrast.py -> build/bdist.linux-armv7l/wheel/ukat/vessels
2024-02-23T16:54:35,589   copying build/lib/ukat/vessels/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/vessels
2024-02-23T16:54:35,591   copying build/lib/ukat/__init__.py -> build/bdist.linux-armv7l/wheel/ukat
2024-02-23T16:54:35,593   creating build/bdist.linux-armv7l/wheel/ukat/mapping
2024-02-23T16:54:35,594   copying build/lib/ukat/mapping/t2.py -> build/bdist.linux-armv7l/wheel/ukat/mapping
2024-02-23T16:54:35,597   creating build/bdist.linux-armv7l/wheel/ukat/mapping/tests
2024-02-23T16:54:35,598   copying build/lib/ukat/mapping/tests/test_mtr.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests
2024-02-23T16:54:35,600   copying build/lib/ukat/mapping/tests/test_t1.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests
2024-02-23T16:54:35,602   copying build/lib/ukat/mapping/tests/test_t2_stimfit.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests
2024-02-23T16:54:35,605   copying build/lib/ukat/mapping/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests
2024-02-23T16:54:35,606   copying build/lib/ukat/mapping/tests/test_t2.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests
2024-02-23T16:54:35,609   copying build/lib/ukat/mapping/tests/test_diffusion.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests
2024-02-23T16:54:35,611   copying build/lib/ukat/mapping/tests/test_t2star.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests
2024-02-23T16:54:35,613   copying build/lib/ukat/mapping/tests/test_b0.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/tests
2024-02-23T16:54:35,615   copying build/lib/ukat/mapping/t2_stimfit.py -> build/bdist.linux-armv7l/wheel/ukat/mapping
2024-02-23T16:54:35,618   copying build/lib/ukat/mapping/t1.py -> build/bdist.linux-armv7l/wheel/ukat/mapping
2024-02-23T16:54:35,621   creating build/bdist.linux-armv7l/wheel/ukat/mapping/fitting
2024-02-23T16:54:35,622   creating build/bdist.linux-armv7l/wheel/ukat/mapping/fitting/tests
2024-02-23T16:54:35,622   copying build/lib/ukat/mapping/fitting/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/fitting/tests
2024-02-23T16:54:35,624   copying build/lib/ukat/mapping/fitting/tests/test_relaxation.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/fitting/tests
2024-02-23T16:54:35,626   copying build/lib/ukat/mapping/fitting/relaxation.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/fitting
2024-02-23T16:54:35,628   copying build/lib/ukat/mapping/fitting/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/mapping/fitting
2024-02-23T16:54:35,630   copying build/lib/ukat/mapping/t2star.py -> build/bdist.linux-armv7l/wheel/ukat/mapping
2024-02-23T16:54:35,632   copying build/lib/ukat/mapping/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/mapping
2024-02-23T16:54:35,634   copying build/lib/ukat/mapping/diffusion.py -> build/bdist.linux-armv7l/wheel/ukat/mapping
2024-02-23T16:54:35,636   copying build/lib/ukat/mapping/b0.py -> build/bdist.linux-armv7l/wheel/ukat/mapping
2024-02-23T16:54:35,639   copying build/lib/ukat/mapping/mtr.py -> build/bdist.linux-armv7l/wheel/ukat/mapping
2024-02-23T16:54:35,641   creating build/bdist.linux-armv7l/wheel/ukat/qa
2024-02-23T16:54:35,642   creating build/bdist.linux-armv7l/wheel/ukat/qa/tests
2024-02-23T16:54:35,643   copying build/lib/ukat/qa/tests/test_snr.py -> build/bdist.linux-armv7l/wheel/ukat/qa/tests
2024-02-23T16:54:35,645   copying build/lib/ukat/qa/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/qa/tests
2024-02-23T16:54:35,647   copying build/lib/ukat/qa/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/qa
2024-02-23T16:54:35,648   copying build/lib/ukat/qa/snr.py -> build/bdist.linux-armv7l/wheel/ukat/qa
2024-02-23T16:54:35,651   creating build/bdist.linux-armv7l/wheel/ukat/segmentation
2024-02-23T16:54:35,652   creating build/bdist.linux-armv7l/wheel/ukat/segmentation/tests
2024-02-23T16:54:35,653   copying build/lib/ukat/segmentation/tests/test_whole_kidney.py -> build/bdist.linux-armv7l/wheel/ukat/segmentation/tests
2024-02-23T16:54:35,655   copying build/lib/ukat/segmentation/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/segmentation/tests
2024-02-23T16:54:35,657   copying build/lib/ukat/segmentation/whole_kidney.py -> build/bdist.linux-armv7l/wheel/ukat/segmentation
2024-02-23T16:54:35,659   copying build/lib/ukat/segmentation/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/segmentation
2024-02-23T16:54:35,661   creating build/bdist.linux-armv7l/wheel/ukat/utils
2024-02-23T16:54:35,662   copying build/lib/ukat/utils/arraystats.py -> build/bdist.linux-armv7l/wheel/ukat/utils
2024-02-23T16:54:35,664   copying build/lib/ukat/utils/tools.py -> build/bdist.linux-armv7l/wheel/ukat/utils
2024-02-23T16:54:35,667   creating build/bdist.linux-armv7l/wheel/ukat/utils/tests
2024-02-23T16:54:35,668   copying build/lib/ukat/utils/tests/test_arraystats.py -> build/bdist.linux-armv7l/wheel/ukat/utils/tests
2024-02-23T16:54:35,671   creating build/bdist.linux-armv7l/wheel/ukat/utils/tests/test_data
2024-02-23T16:54:35,672   copying build/lib/ukat/utils/tests/test_data/diffusion_scheme.txt -> build/bdist.linux-armv7l/wheel/ukat/utils/tests/test_data
2024-02-23T16:54:35,674   copying build/lib/ukat/utils/tests/test_data/expected_from_str.dvs -> build/bdist.linux-armv7l/wheel/ukat/utils/tests/test_data
2024-02-23T16:54:35,676   copying build/lib/ukat/utils/tests/test_data/expected_from_txt.dvs -> build/bdist.linux-armv7l/wheel/ukat/utils/tests/test_data
2024-02-23T16:54:35,678   copying build/lib/ukat/utils/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/utils/tests
2024-02-23T16:54:35,679   copying build/lib/ukat/utils/tests/test_ge.py -> build/bdist.linux-armv7l/wheel/ukat/utils/tests
2024-02-23T16:54:35,681   copying build/lib/ukat/utils/tests/test_siemens.py -> build/bdist.linux-armv7l/wheel/ukat/utils/tests
2024-02-23T16:54:35,683   copying build/lib/ukat/utils/tests/test_tools.py -> build/bdist.linux-armv7l/wheel/ukat/utils/tests
2024-02-23T16:54:35,685   copying build/lib/ukat/utils/ge.py -> build/bdist.linux-armv7l/wheel/ukat/utils
2024-02-23T16:54:35,686   copying build/lib/ukat/utils/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/utils
2024-02-23T16:54:35,688   copying build/lib/ukat/utils/siemens.py -> build/bdist.linux-armv7l/wheel/ukat/utils
2024-02-23T16:54:35,690   creating build/bdist.linux-armv7l/wheel/ukat/data
2024-02-23T16:54:35,691   creating build/bdist.linux-armv7l/wheel/ukat/data/tests
2024-02-23T16:54:35,692   copying build/lib/ukat/data/tests/test_fetch.py -> build/bdist.linux-armv7l/wheel/ukat/data/tests
2024-02-23T16:54:35,694   copying build/lib/ukat/data/tests/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/data/tests
2024-02-23T16:54:35,696   copying build/lib/ukat/data/fetch.py -> build/bdist.linux-armv7l/wheel/ukat/data
2024-02-23T16:54:35,699   copying build/lib/ukat/data/__init__.py -> build/bdist.linux-armv7l/wheel/ukat/data
2024-02-23T16:54:35,701   running install_egg_info
2024-02-23T16:54:35,730   Copying ukat.egg-info to build/bdist.linux-armv7l/wheel/ukat-0.7.1-py3.11.egg-info
2024-02-23T16:54:35,739   running install_scripts
2024-02-23T16:54:35,756   creating build/bdist.linux-armv7l/wheel/ukat-0.7.1.dist-info/WHEEL
2024-02-23T16:54:35,759   creating '/tmp/pip-wheel-wxm6gphv/ukat-0.7.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-02-23T16:54:35,761   adding 'ukat/__init__.py'
2024-02-23T16:54:35,762   adding 'ukat/data/__init__.py'
2024-02-23T16:54:35,766   adding 'ukat/data/fetch.py'
2024-02-23T16:54:35,768   adding 'ukat/data/tests/__init__.py'
2024-02-23T16:54:35,769   adding 'ukat/data/tests/test_fetch.py'
2024-02-23T16:54:35,771   adding 'ukat/mapping/__init__.py'
2024-02-23T16:54:35,773   adding 'ukat/mapping/b0.py'
2024-02-23T16:54:35,775   adding 'ukat/mapping/diffusion.py'
2024-02-23T16:54:35,777   adding 'ukat/mapping/mtr.py'
2024-02-23T16:54:35,779   adding 'ukat/mapping/t1.py'
2024-02-23T16:54:35,781   adding 'ukat/mapping/t2.py'
2024-02-23T16:54:35,784   adding 'ukat/mapping/t2_stimfit.py'
2024-02-23T16:54:35,786   adding 'ukat/mapping/t2star.py'
2024-02-23T16:54:35,788   adding 'ukat/mapping/fitting/__init__.py'
2024-02-23T16:54:35,789   adding 'ukat/mapping/fitting/relaxation.py'
2024-02-23T16:54:35,791   adding 'ukat/mapping/fitting/tests/__init__.py'
2024-02-23T16:54:35,792   adding 'ukat/mapping/fitting/tests/test_relaxation.py'
2024-02-23T16:54:35,794   adding 'ukat/mapping/tests/__init__.py'
2024-02-23T16:54:35,796   adding 'ukat/mapping/tests/test_b0.py'
2024-02-23T16:54:35,797   adding 'ukat/mapping/tests/test_diffusion.py'
2024-02-23T16:54:35,799   adding 'ukat/mapping/tests/test_mtr.py'
2024-02-23T16:54:35,802   adding 'ukat/mapping/tests/test_t1.py'
2024-02-23T16:54:35,803   adding 'ukat/mapping/tests/test_t2.py'
2024-02-23T16:54:35,805   adding 'ukat/mapping/tests/test_t2_stimfit.py'
2024-02-23T16:54:35,807   adding 'ukat/mapping/tests/test_t2star.py'
2024-02-23T16:54:35,809   adding 'ukat/qa/__init__.py'
2024-02-23T16:54:35,810   adding 'ukat/qa/snr.py'
2024-02-23T16:54:35,812   adding 'ukat/qa/tests/__init__.py'
2024-02-23T16:54:35,814   adding 'ukat/qa/tests/test_snr.py'
2024-02-23T16:54:35,815   adding 'ukat/segmentation/__init__.py'
2024-02-23T16:54:35,817   adding 'ukat/segmentation/whole_kidney.py'
2024-02-23T16:54:35,818   adding 'ukat/segmentation/tests/__init__.py'
2024-02-23T16:54:35,820   adding 'ukat/segmentation/tests/test_whole_kidney.py'
2024-02-23T16:54:35,821   adding 'ukat/utils/__init__.py'
2024-02-23T16:54:35,824   adding 'ukat/utils/arraystats.py'
2024-02-23T16:54:35,825   adding 'ukat/utils/ge.py'
2024-02-23T16:54:35,826   adding 'ukat/utils/siemens.py'
2024-02-23T16:54:35,828   adding 'ukat/utils/tools.py'
2024-02-23T16:54:35,830   adding 'ukat/utils/tests/__init__.py'
2024-02-23T16:54:35,831   adding 'ukat/utils/tests/test_arraystats.py'
2024-02-23T16:54:35,833   adding 'ukat/utils/tests/test_ge.py'
2024-02-23T16:54:35,834   adding 'ukat/utils/tests/test_siemens.py'
2024-02-23T16:54:35,835   adding 'ukat/utils/tests/test_tools.py'
2024-02-23T16:54:35,837   adding 'ukat/utils/tests/test_data/diffusion_scheme.txt'
2024-02-23T16:54:35,838   adding 'ukat/utils/tests/test_data/expected_from_str.dvs'
2024-02-23T16:54:35,839   adding 'ukat/utils/tests/test_data/expected_from_txt.dvs'
2024-02-23T16:54:35,841   adding 'ukat/vessels/__init__.py'
2024-02-23T16:54:35,843   adding 'ukat/vessels/phase_contrast.py'
2024-02-23T16:54:35,844   adding 'ukat/vessels/tests/__init__.py'
2024-02-23T16:54:35,846   adding 'ukat/vessels/tests/test_phase_contrast.py'
2024-02-23T16:54:35,853   adding 'ukat-0.7.1.dist-info/LICENSE'
2024-02-23T16:54:35,854   adding 'ukat-0.7.1.dist-info/METADATA'
2024-02-23T16:54:35,855   adding 'ukat-0.7.1.dist-info/WHEEL'
2024-02-23T16:54:35,856   adding 'ukat-0.7.1.dist-info/top_level.txt'
2024-02-23T16:54:35,857   adding 'ukat-0.7.1.dist-info/RECORD'
2024-02-23T16:54:35,860   removing build/bdist.linux-armv7l/wheel
2024-02-23T16:54:35,987   Building wheel for ukat (setup.py): finished with status 'done'
2024-02-23T16:54:35,990   Created wheel for ukat: filename=ukat-0.7.1-py3-none-any.whl size=102608 sha256=eca72d511ddc3d26f74c0b431b347cb699990bd059fe8a1d19b7997d1e87be3a
2024-02-23T16:54:35,991   Stored in directory: /tmp/pip-ephem-wheel-cache-iy0d6ykt/wheels/9e/e9/1a/4771451354a9069335e9971c13cfd9c459b68682006ab11fd4
2024-02-23T16:54:36,004 Successfully built ukat
2024-02-23T16:54:36,009 Removed build tracker: '/tmp/pip-build-tracker-bdwmqo6x'