2024-02-24T16:20:51,985 Created temporary directory: /tmp/pip-build-tracker-ji9_xlox 2024-02-24T16:20:51,986 Initialized build tracking at /tmp/pip-build-tracker-ji9_xlox 2024-02-24T16:20:51,987 Created build tracker: /tmp/pip-build-tracker-ji9_xlox 2024-02-24T16:20:51,987 Entered build tracker: /tmp/pip-build-tracker-ji9_xlox 2024-02-24T16:20:51,988 Created temporary directory: /tmp/pip-wheel-wcyj75zw 2024-02-24T16:20:51,991 Created temporary directory: /tmp/pip-ephem-wheel-cache-27o7_kra 2024-02-24T16:20:52,013 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-02-24T16:20:52,016 2 location(s) to search for versions of biomero: 2024-02-24T16:20:52,016 * https://pypi.org/simple/biomero/ 2024-02-24T16:20:52,016 * https://www.piwheels.org/simple/biomero/ 2024-02-24T16:20:52,017 Fetching project page and analyzing links: https://pypi.org/simple/biomero/ 2024-02-24T16:20:52,017 Getting page https://pypi.org/simple/biomero/ 2024-02-24T16:20:52,019 Found index url https://pypi.org/simple/ 2024-02-24T16:20:52,235 Fetched page https://pypi.org/simple/biomero/ as application/vnd.pypi.simple.v1+json 2024-02-24T16:20:52,238 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/62/48/c77a7d502ed23e824988527ffe744d77ec3692bf373f5dffb6406149f55e/biomero-1.2.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-02-24T16:20:52,239 Found link https://files.pythonhosted.org/packages/37/4b/4934e30b8ac7f859e20ce2f33ebb9d9de0c2611fd419587e840b457da994/biomero-1.2.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.2.0 2024-02-24T16:20:52,239 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/ba/59/df01007bae6d10f7a894eb8f067b19a6fc1c85cef3621532c552c8a5d83c/biomero-1.3.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-02-24T16:20:52,240 Found link https://files.pythonhosted.org/packages/93/66/6f3ba130c6ab15b10a0fc92683db7f8a6d0a60df0c00311f3011d8801db2/biomero-1.3.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.3.0 2024-02-24T16:20:52,241 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/97/35/d6b2ca0b76deaab237094daa9fb4b6c86df67ef59f07510c101082235d8d/biomero-1.4.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-02-24T16:20:52,242 Found link https://files.pythonhosted.org/packages/72/2d/612e4f8aedcfd6a0aca21b7896a9ca74e18fdbc382538f411fbe4e403fe4/biomero-1.4.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.4.0 2024-02-24T16:20:52,243 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/f2/2a/58f8f3897d6bfffb13375cb3f67dc4776773852b6cb89c00b45317a93854/biomero-1.5.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-02-24T16:20:52,244 Found link https://files.pythonhosted.org/packages/22/5d/beb526e718ea20582a7a10ef277d10f2907723f2dd0bf57465a8f406f27e/biomero-1.5.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.5.0 2024-02-24T16:20:52,244 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/03/8f/4f9506b39fa51bf565e2354dc887ec53ede58150a86a18b92f6bfd8c72a8/biomero-1.5.1-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-02-24T16:20:52,245 Found link https://files.pythonhosted.org/packages/98/96/a628cef6b3ed1f89ab3bca30285b46e477bb01bd7fdf6a63e68a0f85c769/biomero-1.5.1.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.5.1 2024-02-24T16:20:52,246 Fetching project page and analyzing links: https://www.piwheels.org/simple/biomero/ 2024-02-24T16:20:52,247 Getting page https://www.piwheels.org/simple/biomero/ 2024-02-24T16:20:52,248 Found index url https://www.piwheels.org/simple/ 2024-02-24T16:21:00,889 Fetched page https://www.piwheels.org/simple/biomero/ as text/html 2024-02-24T16:21:00,893 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.5.0-py3-none-any.whl#sha256=da32037e690913b648bc08b4cf95219e51618920116abdb024914dc4b29393fd (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-02-24T16:21:00,894 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.4.0-py3-none-any.whl#sha256=06a09b9974b9782c3d527bf0ab8d67349261b9af71c6aa3ebf12f342eddd9286 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-02-24T16:21:00,895 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.3.0-py3-none-any.whl#sha256=e87fb4e5b3565cfa3b27830d8d1d1bff5c1054bfb032d2e6055e966ef84df39d (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-02-24T16:21:00,896 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.2.0-py3-none-any.whl#sha256=0a3d446aaed8e43c191ec7b78fd1731e91935fd1e432bde72a96689be19f8dbf (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-02-24T16:21:00,897 Skipping link: not a file: https://www.piwheels.org/simple/biomero/ 2024-02-24T16:21:00,897 Skipping link: not a file: https://pypi.org/simple/biomero/ 2024-02-24T16:21:00,939 Given no hashes to check 1 links for project 'biomero': discarding no candidates 2024-02-24T16:21:00,967 Collecting biomero==1.5.1 2024-02-24T16:21:00,970 Created temporary directory: /tmp/pip-unpack-qhlgzrsl 2024-02-24T16:21:01,221 Downloading biomero-1.5.1.tar.gz (1.1 MB) 2024-02-24T16:21:01,545 Added biomero==1.5.1 from https://files.pythonhosted.org/packages/98/96/a628cef6b3ed1f89ab3bca30285b46e477bb01bd7fdf6a63e68a0f85c769/biomero-1.5.1.tar.gz to build tracker '/tmp/pip-build-tracker-ji9_xlox' 2024-02-24T16:21:01,551 Created temporary directory: /tmp/pip-build-env-yna4a389 2024-02-24T16:21:01,555 Installing build dependencies: started 2024-02-24T16:21:01,557 Running command pip subprocess to install build dependencies 2024-02-24T16:21:02,697 Using pip 23.3.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-02-24T16:21:03,300 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-02-24T16:21:12,286 Collecting setuptools>=45 2024-02-24T16:21:20,238 Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.1.1-py3-none-any.whl (819 kB) 2024-02-24T16:21:30,136 Collecting setuptools_scm>=6.2 (from setuptools_scm[toml]>=6.2) 2024-02-24T16:21:39,305 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-8.0.4-py3-none-any.whl (42 kB) 2024-02-24T16:21:44,335 Collecting packaging>=20 (from setuptools_scm>=6.2->setuptools_scm[toml]>=6.2) 2024-02-24T16:21:44,350 Using cached https://www.piwheels.org/simple/packaging/packaging-23.2-py3-none-any.whl (53 kB) 2024-02-24T16:21:49,384 Collecting typing-extensions (from setuptools_scm>=6.2->setuptools_scm[toml]>=6.2) 2024-02-24T16:21:49,399 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.9.0-py3-none-any.whl (32 kB) 2024-02-24T16:21:52,857 Installing collected packages: typing-extensions, setuptools, packaging, setuptools_scm 2024-02-24T16:21:55,530 Successfully installed packaging-23.2 setuptools-69.1.1 setuptools_scm-8.0.4 typing-extensions-4.9.0 2024-02-24T16:21:56,009 [notice] A new release of pip is available: 23.3.1 -> 24.0 2024-02-24T16:21:56,010 [notice] To update, run: python3 -m pip install --upgrade pip 2024-02-24T16:21:56,295 Installing build dependencies: finished with status 'done' 2024-02-24T16:21:56,298 Getting requirements to build wheel: started 2024-02-24T16:21:56,299 Running command Getting requirements to build wheel 2024-02-24T16:21:57,150 running egg_info 2024-02-24T16:21:57,155 writing biomero.egg-info/PKG-INFO 2024-02-24T16:21:57,161 writing dependency_links to biomero.egg-info/dependency_links.txt 2024-02-24T16:21:57,163 writing requirements to biomero.egg-info/requires.txt 2024-02-24T16:21:57,164 writing top-level names to biomero.egg-info/top_level.txt 2024-02-24T16:21:57,205 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-02-24T16:21:57,209 reading manifest file 'biomero.egg-info/SOURCES.txt' 2024-02-24T16:21:57,212 reading manifest template 'MANIFEST.in' 2024-02-24T16:21:57,220 adding license file 'LICENSE' 2024-02-24T16:21:57,223 writing manifest file 'biomero.egg-info/SOURCES.txt' 2024-02-24T16:21:57,341 Getting requirements to build wheel: finished with status 'done' 2024-02-24T16:21:57,353 Installing backend dependencies: started 2024-02-24T16:21:57,354 Running command pip subprocess to install backend dependencies 2024-02-24T16:21:58,544 Using pip 23.3.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-02-24T16:21:59,164 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-02-24T16:22:07,777 Collecting wheel 2024-02-24T16:22:16,837 Using cached https://www.piwheels.org/simple/wheel/wheel-0.42.0-py3-none-any.whl (65 kB) 2024-02-24T16:22:20,305 Installing collected packages: wheel 2024-02-24T16:22:20,528 Creating /tmp/pip-build-env-yna4a389/normal/local/bin 2024-02-24T16:22:20,531 changing mode of /tmp/pip-build-env-yna4a389/normal/local/bin/wheel to 755 2024-02-24T16:22:20,542 Successfully installed wheel-0.42.0 2024-02-24T16:22:21,016 [notice] A new release of pip is available: 23.3.1 -> 24.0 2024-02-24T16:22:21,017 [notice] To update, run: python3 -m pip install --upgrade pip 2024-02-24T16:22:21,242 Installing backend dependencies: finished with status 'done' 2024-02-24T16:22:21,245 Created temporary directory: /tmp/pip-modern-metadata-if6ycihj 2024-02-24T16:22:21,253 Preparing metadata (pyproject.toml): started 2024-02-24T16:22:21,254 Running command Preparing metadata (pyproject.toml) 2024-02-24T16:22:22,409 running dist_info 2024-02-24T16:22:22,415 creating /tmp/pip-modern-metadata-if6ycihj/biomero.egg-info 2024-02-24T16:22:22,420 writing /tmp/pip-modern-metadata-if6ycihj/biomero.egg-info/PKG-INFO 2024-02-24T16:22:22,425 writing dependency_links to /tmp/pip-modern-metadata-if6ycihj/biomero.egg-info/dependency_links.txt 2024-02-24T16:22:22,428 writing requirements to /tmp/pip-modern-metadata-if6ycihj/biomero.egg-info/requires.txt 2024-02-24T16:22:22,429 writing top-level names to /tmp/pip-modern-metadata-if6ycihj/biomero.egg-info/top_level.txt 2024-02-24T16:22:22,430 writing manifest file '/tmp/pip-modern-metadata-if6ycihj/biomero.egg-info/SOURCES.txt' 2024-02-24T16:22:22,470 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-02-24T16:22:22,473 reading manifest file '/tmp/pip-modern-metadata-if6ycihj/biomero.egg-info/SOURCES.txt' 2024-02-24T16:22:22,476 reading manifest template 'MANIFEST.in' 2024-02-24T16:22:22,484 adding license file 'LICENSE' 2024-02-24T16:22:22,486 writing manifest file '/tmp/pip-modern-metadata-if6ycihj/biomero.egg-info/SOURCES.txt' 2024-02-24T16:22:22,488 creating '/tmp/pip-modern-metadata-if6ycihj/biomero-1.5.1.dist-info' 2024-02-24T16:22:22,651 Preparing metadata (pyproject.toml): finished with status 'done' 2024-02-24T16:22:22,659 Source in /tmp/pip-wheel-wcyj75zw/biomero_c359ec8df4364805bf0510bd5983de32 has version 1.5.1, which satisfies requirement biomero==1.5.1 from https://files.pythonhosted.org/packages/98/96/a628cef6b3ed1f89ab3bca30285b46e477bb01bd7fdf6a63e68a0f85c769/biomero-1.5.1.tar.gz 2024-02-24T16:22:22,660 Removed biomero==1.5.1 from https://files.pythonhosted.org/packages/98/96/a628cef6b3ed1f89ab3bca30285b46e477bb01bd7fdf6a63e68a0f85c769/biomero-1.5.1.tar.gz from build tracker '/tmp/pip-build-tracker-ji9_xlox' 2024-02-24T16:22:22,672 Created temporary directory: /tmp/pip-unpack-n4ngb39f 2024-02-24T16:22:22,673 Created temporary directory: /tmp/pip-unpack-ruylocpv 2024-02-24T16:22:22,695 Building wheels for collected packages: biomero 2024-02-24T16:22:22,699 Created temporary directory: /tmp/pip-wheel-792iw1v_ 2024-02-24T16:22:22,700 Destination directory: /tmp/pip-wheel-792iw1v_ 2024-02-24T16:22:22,702 Building wheel for biomero (pyproject.toml): started 2024-02-24T16:22:22,703 Running command Building wheel for biomero (pyproject.toml) 2024-02-24T16:22:23,515 running bdist_wheel 2024-02-24T16:22:23,537 running build 2024-02-24T16:22:23,538 running build_py 2024-02-24T16:22:23,543 creating build 2024-02-24T16:22:23,544 creating build/lib 2024-02-24T16:22:23,545 creating build/lib/docs 2024-02-24T16:22:23,546 copying docs/conf.py -> build/lib/docs 2024-02-24T16:22:23,548 creating build/lib/biomero 2024-02-24T16:22:23,549 copying biomero/slurm_client.py -> build/lib/biomero 2024-02-24T16:22:23,553 copying biomero/__init__.py -> build/lib/biomero 2024-02-24T16:22:23,554 copying biomero/constants.py -> build/lib/biomero 2024-02-24T16:22:23,557 creating build/lib/resources 2024-02-24T16:22:23,558 copying resources/convert_zarr_to_tiff.py -> build/lib/resources 2024-02-24T16:22:23,559 copying resources/__init__.py -> build/lib/resources 2024-02-24T16:22:23,561 creating build/lib/tests 2024-02-24T16:22:23,562 creating build/lib/tests/integration 2024-02-24T16:22:23,563 copying tests/integration/__init__.py -> build/lib/tests/integration 2024-02-24T16:22:23,565 creating build/lib/tests/unit 2024-02-24T16:22:23,566 copying tests/unit/__init__.py -> build/lib/tests/unit 2024-02-24T16:22:23,567 copying tests/unit/test_slurm_client.py -> build/lib/tests/unit 2024-02-24T16:22:23,571 running egg_info 2024-02-24T16:22:23,576 writing biomero.egg-info/PKG-INFO 2024-02-24T16:22:23,581 writing dependency_links to biomero.egg-info/dependency_links.txt 2024-02-24T16:22:23,582 writing requirements to biomero.egg-info/requires.txt 2024-02-24T16:22:23,583 writing top-level names to biomero.egg-info/top_level.txt 2024-02-24T16:22:23,614 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-02-24T16:22:23,617 reading manifest file 'biomero.egg-info/SOURCES.txt' 2024-02-24T16:22:23,621 reading manifest template 'MANIFEST.in' 2024-02-24T16:22:23,629 adding license file 'LICENSE' 2024-02-24T16:22:23,632 writing manifest file 'biomero.egg-info/SOURCES.txt' 2024-02-24T16:22:23,639 copying docs/Makefile -> build/lib/docs 2024-02-24T16:22:23,640 copying docs/index.rst -> build/lib/docs 2024-02-24T16:22:23,643 copying docs/make.bat -> build/lib/docs 2024-02-24T16:22:23,645 copying docs/modules.rst -> build/lib/docs 2024-02-24T16:22:23,647 copying docs/omero_slurm_client.rst -> build/lib/docs 2024-02-24T16:22:23,649 copying docs/readme_link.md -> build/lib/docs 2024-02-24T16:22:23,651 copying docs/requirements.txt -> build/lib/docs 2024-02-24T16:22:23,653 copying docs/tutorial_link.md -> build/lib/docs 2024-02-24T16:22:23,655 copying resources/convert_job_array.sh -> build/lib/resources 2024-02-24T16:22:23,657 copying resources/convert_zarr_to_tiff.def -> build/lib/resources 2024-02-24T16:22:23,659 copying resources/example.config -> build/lib/resources 2024-02-24T16:22:23,661 copying resources/job_template.sh -> build/lib/resources 2024-02-24T16:22:23,663 copying resources/pull_images.sh -> build/lib/resources 2024-02-24T16:22:23,665 copying resources/slurm-config.ini -> build/lib/resources 2024-02-24T16:22:23,667 creating build/lib/resources/tutorials 2024-02-24T16:22:23,669 copying resources/tutorials/tutorial_GoogleCloud_slurm.md -> build/lib/resources/tutorials 2024-02-24T16:22:23,672 copying resources/tutorials/tutorial_cellexpansion.md -> build/lib/resources/tutorials 2024-02-24T16:22:23,674 copying resources/tutorials/tutorial_cellprofiler.md -> build/lib/resources/tutorials 2024-02-24T16:22:23,677 copying resources/tutorials/tutorial_local_slurm.md -> build/lib/resources/tutorials 2024-02-24T16:22:23,681 creating build/lib/resources/tutorials/images 2024-02-24T16:22:23,682 copying resources/tutorials/images/Cells.tif -> build/lib/resources/tutorials/images 2024-02-24T16:22:23,690 copying resources/tutorials/images/cellexpansion.png -> build/lib/resources/tutorials/images 2024-02-24T16:22:23,698 copying resources/tutorials/images/gc_allow_ssh.PNG -> build/lib/resources/tutorials/images 2024-02-24T16:22:23,702 copying resources/tutorials/images/nuclei_labels.png -> build/lib/resources/tutorials/images 2024-02-24T16:22:23,708 copying resources/tutorials/images/webclient_init_env.PNG -> build/lib/resources/tutorials/images 2024-02-24T16:22:23,711 copying resources/tutorials/images/webclient_init_env_done.PNG -> build/lib/resources/tutorials/images 2024-02-24T16:22:23,714 copying resources/tutorials/images/webclient_run_cellpose.PNG -> build/lib/resources/tutorials/images 2024-02-24T16:22:23,717 copying resources/tutorials/images/webclient_run_workflow.PNG -> build/lib/resources/tutorials/images 2024-02-24T16:22:23,731 installing to build/bdist.linux-armv7l/wheel 2024-02-24T16:22:23,732 running install 2024-02-24T16:22:23,756 running install_lib 2024-02-24T16:22:23,761 creating build/bdist.linux-armv7l 2024-02-24T16:22:23,762 creating build/bdist.linux-armv7l/wheel 2024-02-24T16:22:23,764 creating build/bdist.linux-armv7l/wheel/docs 2024-02-24T16:22:23,765 copying build/lib/docs/tutorial_link.md -> build/bdist.linux-armv7l/wheel/docs 2024-02-24T16:22:23,767 copying build/lib/docs/make.bat -> build/bdist.linux-armv7l/wheel/docs 2024-02-24T16:22:23,768 copying build/lib/docs/Makefile -> build/bdist.linux-armv7l/wheel/docs 2024-02-24T16:22:23,770 copying build/lib/docs/modules.rst -> build/bdist.linux-armv7l/wheel/docs 2024-02-24T16:22:23,772 copying build/lib/docs/readme_link.md -> build/bdist.linux-armv7l/wheel/docs 2024-02-24T16:22:23,773 copying build/lib/docs/index.rst -> build/bdist.linux-armv7l/wheel/docs 2024-02-24T16:22:23,776 copying build/lib/docs/omero_slurm_client.rst -> build/bdist.linux-armv7l/wheel/docs 2024-02-24T16:22:23,777 copying build/lib/docs/conf.py -> build/bdist.linux-armv7l/wheel/docs 2024-02-24T16:22:23,779 copying build/lib/docs/requirements.txt -> build/bdist.linux-armv7l/wheel/docs 2024-02-24T16:22:23,781 creating build/bdist.linux-armv7l/wheel/biomero 2024-02-24T16:22:23,782 copying build/lib/biomero/slurm_client.py -> build/bdist.linux-armv7l/wheel/biomero 2024-02-24T16:22:23,786 copying build/lib/biomero/__init__.py -> build/bdist.linux-armv7l/wheel/biomero 2024-02-24T16:22:23,788 copying build/lib/biomero/constants.py -> build/bdist.linux-armv7l/wheel/biomero 2024-02-24T16:22:23,790 creating build/bdist.linux-armv7l/wheel/tests 2024-02-24T16:22:23,791 creating build/bdist.linux-armv7l/wheel/tests/integration 2024-02-24T16:22:23,792 copying build/lib/tests/integration/__init__.py -> build/bdist.linux-armv7l/wheel/tests/integration 2024-02-24T16:22:23,795 creating build/bdist.linux-armv7l/wheel/tests/unit 2024-02-24T16:22:23,796 copying build/lib/tests/unit/__init__.py -> build/bdist.linux-armv7l/wheel/tests/unit 2024-02-24T16:22:23,797 copying build/lib/tests/unit/test_slurm_client.py -> build/bdist.linux-armv7l/wheel/tests/unit 2024-02-24T16:22:23,801 creating build/bdist.linux-armv7l/wheel/resources 2024-02-24T16:22:23,802 copying build/lib/resources/convert_zarr_to_tiff.def -> build/bdist.linux-armv7l/wheel/resources 2024-02-24T16:22:23,804 copying build/lib/resources/pull_images.sh -> build/bdist.linux-armv7l/wheel/resources 2024-02-24T16:22:23,806 copying build/lib/resources/example.config -> build/bdist.linux-armv7l/wheel/resources 2024-02-24T16:22:23,808 copying build/lib/resources/convert_job_array.sh -> build/bdist.linux-armv7l/wheel/resources 2024-02-24T16:22:23,810 copying build/lib/resources/slurm-config.ini -> build/bdist.linux-armv7l/wheel/resources 2024-02-24T16:22:23,812 creating build/bdist.linux-armv7l/wheel/resources/tutorials 2024-02-24T16:22:23,813 copying build/lib/resources/tutorials/tutorial_cellprofiler.md -> build/bdist.linux-armv7l/wheel/resources/tutorials 2024-02-24T16:22:23,816 copying build/lib/resources/tutorials/tutorial_GoogleCloud_slurm.md -> build/bdist.linux-armv7l/wheel/resources/tutorials 2024-02-24T16:22:23,819 copying build/lib/resources/tutorials/tutorial_local_slurm.md -> build/bdist.linux-armv7l/wheel/resources/tutorials 2024-02-24T16:22:23,822 creating build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-02-24T16:22:23,823 copying build/lib/resources/tutorials/images/nuclei_labels.png -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-02-24T16:22:23,829 copying build/lib/resources/tutorials/images/Cells.tif -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-02-24T16:22:23,836 copying build/lib/resources/tutorials/images/webclient_init_env.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-02-24T16:22:23,838 copying build/lib/resources/tutorials/images/cellexpansion.png -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-02-24T16:22:23,846 copying build/lib/resources/tutorials/images/webclient_run_workflow.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-02-24T16:22:23,849 copying build/lib/resources/tutorials/images/gc_allow_ssh.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-02-24T16:22:23,853 copying build/lib/resources/tutorials/images/webclient_run_cellpose.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-02-24T16:22:23,855 copying build/lib/resources/tutorials/images/webclient_init_env_done.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-02-24T16:22:23,858 copying build/lib/resources/tutorials/tutorial_cellexpansion.md -> build/bdist.linux-armv7l/wheel/resources/tutorials 2024-02-24T16:22:23,860 copying build/lib/resources/convert_zarr_to_tiff.py -> build/bdist.linux-armv7l/wheel/resources 2024-02-24T16:22:23,862 copying build/lib/resources/__init__.py -> build/bdist.linux-armv7l/wheel/resources 2024-02-24T16:22:23,863 copying build/lib/resources/job_template.sh -> build/bdist.linux-armv7l/wheel/resources 2024-02-24T16:22:23,865 running install_egg_info 2024-02-24T16:22:23,870 Copying biomero.egg-info to build/bdist.linux-armv7l/wheel/biomero-1.5.1-py3.11.egg-info 2024-02-24T16:22:23,883 running install_scripts 2024-02-24T16:22:23,903 creating build/bdist.linux-armv7l/wheel/biomero-1.5.1.dist-info/WHEEL 2024-02-24T16:22:23,906 creating '/tmp/pip-wheel-792iw1v_/.tmp-xgk8oa_d/biomero-1.5.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-02-24T16:22:23,908 adding 'biomero/__init__.py' 2024-02-24T16:22:23,912 adding 'biomero/constants.py' 2024-02-24T16:22:23,920 adding 'biomero/slurm_client.py' 2024-02-24T16:22:23,923 adding 'docs/Makefile' 2024-02-24T16:22:23,925 adding 'docs/conf.py' 2024-02-24T16:22:23,926 adding 'docs/index.rst' 2024-02-24T16:22:23,928 adding 'docs/make.bat' 2024-02-24T16:22:23,929 adding 'docs/modules.rst' 2024-02-24T16:22:23,930 adding 'docs/omero_slurm_client.rst' 2024-02-24T16:22:23,931 adding 'docs/readme_link.md' 2024-02-24T16:22:23,933 adding 'docs/requirements.txt' 2024-02-24T16:22:23,934 adding 'docs/tutorial_link.md' 2024-02-24T16:22:23,936 adding 'resources/__init__.py' 2024-02-24T16:22:23,937 adding 'resources/convert_job_array.sh' 2024-02-24T16:22:23,938 adding 'resources/convert_zarr_to_tiff.def' 2024-02-24T16:22:23,940 adding 'resources/convert_zarr_to_tiff.py' 2024-02-24T16:22:23,941 adding 'resources/example.config' 2024-02-24T16:22:23,942 adding 'resources/job_template.sh' 2024-02-24T16:22:23,943 adding 'resources/pull_images.sh' 2024-02-24T16:22:23,945 adding 'resources/slurm-config.ini' 2024-02-24T16:22:23,948 adding 'resources/tutorials/tutorial_GoogleCloud_slurm.md' 2024-02-24T16:22:23,949 adding 'resources/tutorials/tutorial_cellexpansion.md' 2024-02-24T16:22:23,953 adding 'resources/tutorials/tutorial_cellprofiler.md' 2024-02-24T16:22:23,957 adding 'resources/tutorials/tutorial_local_slurm.md' 2024-02-24T16:22:23,998 adding 'resources/tutorials/images/Cells.tif' 2024-02-24T16:22:24,036 adding 'resources/tutorials/images/cellexpansion.png' 2024-02-24T16:22:24,048 adding 'resources/tutorials/images/gc_allow_ssh.PNG' 2024-02-24T16:22:24,070 adding 'resources/tutorials/images/nuclei_labels.png' 2024-02-24T16:22:24,074 adding 'resources/tutorials/images/webclient_init_env.PNG' 2024-02-24T16:22:24,076 adding 'resources/tutorials/images/webclient_init_env_done.PNG' 2024-02-24T16:22:24,080 adding 'resources/tutorials/images/webclient_run_cellpose.PNG' 2024-02-24T16:22:24,086 adding 'resources/tutorials/images/webclient_run_workflow.PNG' 2024-02-24T16:22:24,089 adding 'tests/integration/__init__.py' 2024-02-24T16:22:24,090 adding 'tests/unit/__init__.py' 2024-02-24T16:22:24,094 adding 'tests/unit/test_slurm_client.py' 2024-02-24T16:22:24,096 adding 'biomero-1.5.1.dist-info/LICENSE' 2024-02-24T16:22:24,103 adding 'biomero-1.5.1.dist-info/METADATA' 2024-02-24T16:22:24,104 adding 'biomero-1.5.1.dist-info/WHEEL' 2024-02-24T16:22:24,105 adding 'biomero-1.5.1.dist-info/top_level.txt' 2024-02-24T16:22:24,106 adding 'biomero-1.5.1.dist-info/RECORD' 2024-02-24T16:22:24,119 removing build/bdist.linux-armv7l/wheel 2024-02-24T16:22:24,257 Building wheel for biomero (pyproject.toml): finished with status 'done' 2024-02-24T16:22:24,284 Created wheel for biomero: filename=biomero-1.5.1-py3-none-any.whl size=1079315 sha256=419f808c9c52525df6108fbd48d53e82cc965e9857500c4544041a791dd4d65e 2024-02-24T16:22:24,285 Stored in directory: /tmp/pip-ephem-wheel-cache-27o7_kra/wheels/c5/52/04/eb554da027ac0db238bdde9e90c515a849925acd2b8a106567 2024-02-24T16:22:24,308 Successfully built biomero 2024-02-24T16:22:24,339 Removed build tracker: '/tmp/pip-build-tracker-ji9_xlox'