2024-02-27T09:53:38,496 Created temporary directory: /tmp/pip-build-tracker-nga8sfbv
2024-02-27T09:53:38,497 Initialized build tracking at /tmp/pip-build-tracker-nga8sfbv
2024-02-27T09:53:38,497 Created build tracker: /tmp/pip-build-tracker-nga8sfbv
2024-02-27T09:53:38,498 Entered build tracker: /tmp/pip-build-tracker-nga8sfbv
2024-02-27T09:53:38,499 Created temporary directory: /tmp/pip-wheel-syr98owj
2024-02-27T09:53:38,502 Created temporary directory: /tmp/pip-ephem-wheel-cache-l_1capzd
2024-02-27T09:53:38,524 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-02-27T09:53:38,528 2 location(s) to search for versions of stcat:
2024-02-27T09:53:38,528 * https://pypi.org/simple/stcat/
2024-02-27T09:53:38,528 * https://www.piwheels.org/simple/stcat/
2024-02-27T09:53:38,528 Fetching project page and analyzing links: https://pypi.org/simple/stcat/
2024-02-27T09:53:38,529 Getting page https://pypi.org/simple/stcat/
2024-02-27T09:53:38,531 Found index url https://pypi.org/simple/
2024-02-27T09:53:38,743 Fetched page https://pypi.org/simple/stcat/ as application/vnd.pypi.simple.v1+json
2024-02-27T09:53:38,745   Skipping link: No binaries permitted for stcat: https://files.pythonhosted.org/packages/dd/d9/7509763cc9a3235091c79b0b4a3a9a415f7b643a68593550ab533d06677d/STCAT-0.2-py3-none-any.whl (from https://pypi.org/simple/stcat/) (requires-python:>=3.8)
2024-02-27T09:53:38,746   Found link https://files.pythonhosted.org/packages/54/ff/46d805ee24659e6c5896441d6a58a39f48af44e54ab5496acf66a564fbc2/STCAT-0.2.tar.gz (from https://pypi.org/simple/stcat/) (requires-python:>=3.8), version: 0.2
2024-02-27T09:53:38,746 Fetching project page and analyzing links: https://www.piwheels.org/simple/stcat/
2024-02-27T09:53:38,747 Getting page https://www.piwheels.org/simple/stcat/
2024-02-27T09:53:38,748 Found index url https://www.piwheels.org/simple/
2024-02-27T09:53:41,107 Fetched page https://www.piwheels.org/simple/stcat/ as text/html
2024-02-27T09:53:41,109 Skipping link: not a file: https://www.piwheels.org/simple/stcat/
2024-02-27T09:53:41,110 Skipping link: not a file: https://pypi.org/simple/stcat/
2024-02-27T09:53:41,158 Given no hashes to check 1 links for project 'stcat': discarding no candidates
2024-02-27T09:53:41,205 Collecting stcat==0.2
2024-02-27T09:53:41,209   Created temporary directory: /tmp/pip-unpack-5iwsarfv
2024-02-27T09:53:41,677   Downloading STCAT-0.2.tar.gz (3.6 MB)
2024-02-27T09:53:42,457   Added stcat==0.2 from https://files.pythonhosted.org/packages/54/ff/46d805ee24659e6c5896441d6a58a39f48af44e54ab5496acf66a564fbc2/STCAT-0.2.tar.gz to build tracker '/tmp/pip-build-tracker-nga8sfbv'
2024-02-27T09:53:42,459   Running setup.py (path:/tmp/pip-wheel-syr98owj/stcat_26c5ad628f37482db88f2aaa77ad9fae/setup.py) egg_info for package stcat
2024-02-27T09:53:42,460   Created temporary directory: /tmp/pip-pip-egg-info-z7ygbxny
2024-02-27T09:53:42,461   Preparing metadata (setup.py): started
2024-02-27T09:53:42,462   Running command python setup.py egg_info
2024-02-27T09:53:43,542   running egg_info
2024-02-27T09:53:43,543   creating /tmp/pip-pip-egg-info-z7ygbxny/STCAT.egg-info
2024-02-27T09:53:43,577   writing /tmp/pip-pip-egg-info-z7ygbxny/STCAT.egg-info/PKG-INFO
2024-02-27T09:53:43,580   writing dependency_links to /tmp/pip-pip-egg-info-z7ygbxny/STCAT.egg-info/dependency_links.txt
2024-02-27T09:53:43,582   writing requirements to /tmp/pip-pip-egg-info-z7ygbxny/STCAT.egg-info/requires.txt
2024-02-27T09:53:43,583   writing top-level names to /tmp/pip-pip-egg-info-z7ygbxny/STCAT.egg-info/top_level.txt
2024-02-27T09:53:43,585   writing manifest file '/tmp/pip-pip-egg-info-z7ygbxny/STCAT.egg-info/SOURCES.txt'
2024-02-27T09:53:43,687   reading manifest file '/tmp/pip-pip-egg-info-z7ygbxny/STCAT.egg-info/SOURCES.txt'
2024-02-27T09:53:43,688   reading manifest template 'MANIFEST.in'
2024-02-27T09:53:43,693   writing manifest file '/tmp/pip-pip-egg-info-z7ygbxny/STCAT.egg-info/SOURCES.txt'
2024-02-27T09:53:43,801   Preparing metadata (setup.py): finished with status 'done'
2024-02-27T09:53:43,805   Source in /tmp/pip-wheel-syr98owj/stcat_26c5ad628f37482db88f2aaa77ad9fae has version 0.2, which satisfies requirement stcat==0.2 from https://files.pythonhosted.org/packages/54/ff/46d805ee24659e6c5896441d6a58a39f48af44e54ab5496acf66a564fbc2/STCAT-0.2.tar.gz
2024-02-27T09:53:43,806   Removed stcat==0.2 from https://files.pythonhosted.org/packages/54/ff/46d805ee24659e6c5896441d6a58a39f48af44e54ab5496acf66a564fbc2/STCAT-0.2.tar.gz from build tracker '/tmp/pip-build-tracker-nga8sfbv'
2024-02-27T09:53:43,812 Created temporary directory: /tmp/pip-unpack-s00owifz
2024-02-27T09:53:43,813 Created temporary directory: /tmp/pip-unpack-xtsy9enh
2024-02-27T09:53:43,823 Building wheels for collected packages: stcat
2024-02-27T09:53:43,827   Created temporary directory: /tmp/pip-wheel-kpdipwrk
2024-02-27T09:53:43,828   Building wheel for stcat (setup.py): started
2024-02-27T09:53:43,829   Destination directory: /tmp/pip-wheel-kpdipwrk
2024-02-27T09:53:43,830   Running command python setup.py bdist_wheel
2024-02-27T09:53:44,922   running bdist_wheel
2024-02-27T09:53:45,056   running build
2024-02-27T09:53:45,056   running build_py
2024-02-27T09:53:45,092   creating build
2024-02-27T09:53:45,092   creating build/lib
2024-02-27T09:53:45,093   creating build/lib/STCAT
2024-02-27T09:53:45,094   copying STCAT/STCAT.py -> build/lib/STCAT
2024-02-27T09:53:45,097   copying STCAT/classifier.py -> build/lib/STCAT
2024-02-27T09:53:45,100   copying STCAT/logger.py -> build/lib/STCAT
2024-02-27T09:53:45,102   copying STCAT/__init__.py -> build/lib/STCAT
2024-02-27T09:53:45,103   copying STCAT/models.py -> build/lib/STCAT
2024-02-27T09:53:45,106   copying STCAT/annotate.py -> build/lib/STCAT
2024-02-27T09:53:45,108   running egg_info
2024-02-27T09:53:45,183   writing STCAT.egg-info/PKG-INFO
2024-02-27T09:53:45,186   writing dependency_links to STCAT.egg-info/dependency_links.txt
2024-02-27T09:53:45,188   writing requirements to STCAT.egg-info/requires.txt
2024-02-27T09:53:45,189   writing top-level names to STCAT.egg-info/top_level.txt
2024-02-27T09:53:45,225   reading manifest file 'STCAT.egg-info/SOURCES.txt'
2024-02-27T09:53:45,227   reading manifest template 'MANIFEST.in'
2024-02-27T09:53:45,232   writing manifest file 'STCAT.egg-info/SOURCES.txt'
2024-02-27T09:53:45,234   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'STCAT.data' is absent from the `packages` configuration.
2024-02-27T09:53:45,235   !!

2024-02-27T09:53:45,236           ********************************************************************************
2024-02-27T09:53:45,237           ############################
2024-02-27T09:53:45,237           # Package would be ignored #
2024-02-27T09:53:45,238           ############################
2024-02-27T09:53:45,238           Python recognizes 'STCAT.data' as an importable package[^1],
2024-02-27T09:53:45,239           but it is absent from setuptools' `packages` configuration.

2024-02-27T09:53:45,240           This leads to an ambiguous overall configuration. If you want to distribute this
2024-02-27T09:53:45,241           package, please make sure that 'STCAT.data' is explicitly added
2024-02-27T09:53:45,242           to the `packages` configuration field.

2024-02-27T09:53:45,243           Alternatively, you can also rely on setuptools' discovery methods
2024-02-27T09:53:45,243           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-02-27T09:53:45,244           instead of `find_packages(...)`/`find:`).

2024-02-27T09:53:45,245           You can read more about "package discovery" on setuptools documentation page:

2024-02-27T09:53:45,246           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-02-27T09:53:45,252           If you don't want 'STCAT.data' to be distributed and are
2024-02-27T09:53:45,261           already explicitly excluding 'STCAT.data' via
2024-02-27T09:53:45,267           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-02-27T09:53:45,268           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-02-27T09:53:45,268           combination with a more fine grained `package-data` configuration.

2024-02-27T09:53:45,270           You can read more about "package data files" on setuptools documentation page:

2024-02-27T09:53:45,273           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-02-27T09:53:45,280           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-02-27T09:53:45,286                 even if it does not contain any `.py` files.
2024-02-27T09:53:45,287                 On the other hand, currently there is no concept of package data
2024-02-27T09:53:45,288                 directory, all directories are treated like packages.
2024-02-27T09:53:45,288           ********************************************************************************

2024-02-27T09:53:45,289   !!
2024-02-27T09:53:45,289     check.warn(importable)
2024-02-27T09:53:45,293   creating build/lib/STCAT/data
2024-02-27T09:53:45,296   copying STCAT/data/T_cell.pkl -> build/lib/STCAT/data
2024-02-27T09:53:45,298   copying STCAT/data/cd4.pkl -> build/lib/STCAT/data
2024-02-27T09:53:45,298   copying STCAT/data/cd8.pkl -> build/lib/STCAT/data
2024-02-27T09:53:45,300   copying STCAT/data/marker_CD4.txt -> build/lib/STCAT/data
2024-02-27T09:53:45,302   copying STCAT/data/marker_CD8.txt -> build/lib/STCAT/data
2024-02-27T09:53:45,337   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2024-02-27T09:53:45,338   !!

2024-02-27T09:53:45,339           ********************************************************************************
2024-02-27T09:53:45,339           Please avoid running ``setup.py`` directly.
2024-02-27T09:53:45,340           Instead, use pypa/build, pypa/installer or other
2024-02-27T09:53:45,340           standards-based tools.

2024-02-27T09:53:45,341           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2024-02-27T09:53:45,342           ********************************************************************************

2024-02-27T09:53:45,343   !!
2024-02-27T09:53:45,344     self.initialize_options()
2024-02-27T09:53:45,374   installing to build/bdist.linux-armv7l/wheel
2024-02-27T09:53:45,375   running install
2024-02-27T09:53:45,399   running install_lib
2024-02-27T09:53:45,433   creating build/bdist.linux-armv7l
2024-02-27T09:53:45,434   creating build/bdist.linux-armv7l/wheel
2024-02-27T09:53:45,436   creating build/bdist.linux-armv7l/wheel/STCAT
2024-02-27T09:53:45,438   creating build/bdist.linux-armv7l/wheel/STCAT/data
2024-02-27T09:53:45,439   copying build/lib/STCAT/data/T_cell.pkl -> build/bdist.linux-armv7l/wheel/STCAT/data
2024-02-27T09:53:45,477   copying build/lib/STCAT/data/marker_CD8.txt -> build/bdist.linux-armv7l/wheel/STCAT/data
2024-02-27T09:53:45,480   copying build/lib/STCAT/data/cd4.pkl -> build/bdist.linux-armv7l/wheel/STCAT/data
2024-02-27T09:53:45,500   copying build/lib/STCAT/data/cd8.pkl -> build/bdist.linux-armv7l/wheel/STCAT/data
2024-02-27T09:53:45,511   copying build/lib/STCAT/data/marker_CD4.txt -> build/bdist.linux-armv7l/wheel/STCAT/data
2024-02-27T09:53:45,513   copying build/lib/STCAT/STCAT.py -> build/bdist.linux-armv7l/wheel/STCAT
2024-02-27T09:53:45,516   copying build/lib/STCAT/classifier.py -> build/bdist.linux-armv7l/wheel/STCAT
2024-02-27T09:53:45,519   copying build/lib/STCAT/logger.py -> build/bdist.linux-armv7l/wheel/STCAT
2024-02-27T09:53:45,521   copying build/lib/STCAT/__init__.py -> build/bdist.linux-armv7l/wheel/STCAT
2024-02-27T09:53:45,523   copying build/lib/STCAT/models.py -> build/bdist.linux-armv7l/wheel/STCAT
2024-02-27T09:53:45,525   copying build/lib/STCAT/annotate.py -> build/bdist.linux-armv7l/wheel/STCAT
2024-02-27T09:53:45,528   running install_egg_info
2024-02-27T09:53:45,567   Copying STCAT.egg-info to build/bdist.linux-armv7l/wheel/STCAT-0.2-py3.11.egg-info
2024-02-27T09:53:45,577   running install_scripts
2024-02-27T09:53:45,590   creating build/bdist.linux-armv7l/wheel/STCAT-0.2.dist-info/WHEEL
2024-02-27T09:53:45,593   creating '/tmp/pip-wheel-kpdipwrk/STCAT-0.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-02-27T09:53:45,597   adding 'STCAT/STCAT.py'
2024-02-27T09:53:45,598   adding 'STCAT/__init__.py'
2024-02-27T09:53:45,600   adding 'STCAT/annotate.py'
2024-02-27T09:53:45,604   adding 'STCAT/classifier.py'
2024-02-27T09:53:45,606   adding 'STCAT/logger.py'
2024-02-27T09:53:45,608   adding 'STCAT/models.py'
2024-02-27T09:53:45,890   adding 'STCAT/data/T_cell.pkl'
2024-02-27T09:53:46,043   adding 'STCAT/data/cd4.pkl'
2024-02-27T09:53:46,128   adding 'STCAT/data/cd8.pkl'
2024-02-27T09:53:46,134   adding 'STCAT/data/marker_CD4.txt'
2024-02-27T09:53:46,136   adding 'STCAT/data/marker_CD8.txt'
2024-02-27T09:53:46,138   adding 'STCAT-0.2.dist-info/METADATA'
2024-02-27T09:53:46,140   adding 'STCAT-0.2.dist-info/WHEEL'
2024-02-27T09:53:46,141   adding 'STCAT-0.2.dist-info/top_level.txt'
2024-02-27T09:53:46,142   adding 'STCAT-0.2.dist-info/RECORD'
2024-02-27T09:53:46,183   removing build/bdist.linux-armv7l/wheel
2024-02-27T09:53:46,300   Building wheel for stcat (setup.py): finished with status 'done'
2024-02-27T09:53:46,338   Created wheel for stcat: filename=STCAT-0.2-py3-none-any.whl size=3607923 sha256=faf26d207bd572f5fad92b52dcd16f0d45056fa51631366657ba80adc9e9f1ff
2024-02-27T09:53:46,339   Stored in directory: /tmp/pip-ephem-wheel-cache-l_1capzd/wheels/d3/f7/b4/bd55da5f7e9a125612655dee2d79ca20513da24d6478132356
2024-02-27T09:53:46,349 Successfully built stcat
2024-02-27T09:53:46,448 Removed build tracker: '/tmp/pip-build-tracker-nga8sfbv'