2024-02-28T11:15:45,579 Created temporary directory: /tmp/pip-build-tracker-xx4p4cv4
2024-02-28T11:15:45,580 Initialized build tracking at /tmp/pip-build-tracker-xx4p4cv4
2024-02-28T11:15:45,580 Created build tracker: /tmp/pip-build-tracker-xx4p4cv4
2024-02-28T11:15:45,581 Entered build tracker: /tmp/pip-build-tracker-xx4p4cv4
2024-02-28T11:15:45,581 Created temporary directory: /tmp/pip-wheel-hw7900yt
2024-02-28T11:15:45,584 Created temporary directory: /tmp/pip-ephem-wheel-cache-yp3ssjbd
2024-02-28T11:15:45,606 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-02-28T11:15:45,609 2 location(s) to search for versions of ampal:
2024-02-28T11:15:45,609 * https://pypi.org/simple/ampal/
2024-02-28T11:15:45,609 * https://www.piwheels.org/simple/ampal/
2024-02-28T11:15:45,610 Fetching project page and analyzing links: https://pypi.org/simple/ampal/
2024-02-28T11:15:45,611 Getting page https://pypi.org/simple/ampal/
2024-02-28T11:15:45,613 Found index url https://pypi.org/simple/
2024-02-28T11:15:45,833 Fetched page https://pypi.org/simple/ampal/ as application/vnd.pypi.simple.v1+json
2024-02-28T11:15:45,836   Found link https://files.pythonhosted.org/packages/3f/e5/03da3a77bba138c165451d3f8efb7fd32818aea4a6212b420c558e9088d8/AMPAL-1.0.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.0.0
2024-02-28T11:15:45,837   Found link https://files.pythonhosted.org/packages/c2/90/2aecb8bdeab8de4f896f38fc792b434292f0f96a86cd3b860c849f4cfd55/AMPAL-1.0.1.tar.gz (from https://pypi.org/simple/ampal/), version: 1.0.1
2024-02-28T11:15:45,837   Found link https://files.pythonhosted.org/packages/29/39/ac32680ba515731a81942c3a1bb8d0731fc0da02185885794ccf51dd604b/AMPAL-1.1.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.1.0
2024-02-28T11:15:45,838   Found link https://files.pythonhosted.org/packages/f4/11/85ef80392ed433f9024abc0bacc2173dd88ce0e7c42f23b804cc3650b1e5/AMPAL-1.2.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.2.0
2024-02-28T11:15:45,838   Found link https://files.pythonhosted.org/packages/a4/9a/940d9cd5af9177e35487a99bf8bf0ae4c80b28eeca70c266ebc2f341cd4d/AMPAL-1.3.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.3.0
2024-02-28T11:15:45,839   Found link https://files.pythonhosted.org/packages/c9/14/728e14ff9e6c3372082ffc88a2f78016b05143f0d6bee5c432c002314169/AMPAL-1.4.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.4.0
2024-02-28T11:15:45,840   Found link https://files.pythonhosted.org/packages/83/d1/b310e662ee0fa4987e60088fb3f9590de690e01c25c1e682acb3905d9bfe/AMPAL-1.5.0.tar.gz (from https://pypi.org/simple/ampal/), version: 1.5.0
2024-02-28T11:15:45,840   Found link https://files.pythonhosted.org/packages/58/48/bdc5a2c7450230301bf7f1604f9d3c26d4b240588d65271fbef37de640ac/AMPAL-1.5.1.tar.gz (from https://pypi.org/simple/ampal/), version: 1.5.1
2024-02-28T11:15:45,841   Found link https://files.pythonhosted.org/packages/f5/68/05f1e4cdc97d4250e6010f3a39474088d4862570dd118e223928cdefcf6b/AMPAL-1.5.2.tar.gz (from https://pypi.org/simple/ampal/), version: 1.5.2
2024-02-28T11:15:45,841   Found link https://files.pythonhosted.org/packages/bc/35/833e1f07e9c31978f56f18db2ccfdd94ba0a5e95d1cce0bb5044aa562012/AMPAL-1.5.3.tar.gz (from https://pypi.org/simple/ampal/), version: 1.5.3
2024-02-28T11:15:45,842   Found link https://files.pythonhosted.org/packages/b8/ab/3030a61292d0dbc664b49500eb0fef54eb847efe19ce6a21e1564b812491/AMPAL-1.5.4.tar.gz (from https://pypi.org/simple/ampal/), version: 1.5.4
2024-02-28T11:15:45,843 Fetching project page and analyzing links: https://www.piwheels.org/simple/ampal/
2024-02-28T11:15:45,844 Getting page https://www.piwheels.org/simple/ampal/
2024-02-28T11:15:45,845 Found index url https://www.piwheels.org/simple/
2024-02-28T11:15:46,082 Fetched page https://www.piwheels.org/simple/ampal/ as text/html
2024-02-28T11:15:46,110   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.3-cp311-cp311-linux_armv6l.whl#sha256=c64160382a0887caabeba27518b64e42c611c2fc168279f9d685b517deff86e2 (from https://www.piwheels.org/simple/ampal/) (requires-python:>=3.8)
2024-02-28T11:15:46,111   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.3-cp311-cp311-linux_armv7l.whl#sha256=c64160382a0887caabeba27518b64e42c611c2fc168279f9d685b517deff86e2 (from https://www.piwheels.org/simple/ampal/) (requires-python:>=3.8)
2024-02-28T11:15:46,112   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.3-cp39-cp39-linux_armv6l.whl#sha256=240e63282cc8ca6903ed71b8a3bbc369afafb852439fd392815560557fcfc5bd (from https://www.piwheels.org/simple/ampal/) (requires-python:>=3.8)
2024-02-28T11:15:46,113   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.3-cp39-cp39-linux_armv7l.whl#sha256=240e63282cc8ca6903ed71b8a3bbc369afafb852439fd392815560557fcfc5bd (from https://www.piwheels.org/simple/ampal/) (requires-python:>=3.8)
2024-02-28T11:15:46,113   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.1-cp311-cp311-linux_armv6l.whl#sha256=293d80d7e02f1e3ab614a717dec0f5999b0ae2c4a43f2a0989d56a1f4514bd9d (from https://www.piwheels.org/simple/ampal/) (requires-python:>=3.8)
2024-02-28T11:15:46,114   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.1-cp311-cp311-linux_armv7l.whl#sha256=293d80d7e02f1e3ab614a717dec0f5999b0ae2c4a43f2a0989d56a1f4514bd9d (from https://www.piwheels.org/simple/ampal/) (requires-python:>=3.8)
2024-02-28T11:15:46,114   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.1-cp39-cp39-linux_armv6l.whl#sha256=308c2269e72e03f6d10ba52bc77726d210007f90293fac278119389202a71d19 (from https://www.piwheels.org/simple/ampal/) (requires-python:>=3.8)
2024-02-28T11:15:46,115   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.1-cp39-cp39-linux_armv7l.whl#sha256=308c2269e72e03f6d10ba52bc77726d210007f90293fac278119389202a71d19 (from https://www.piwheels.org/simple/ampal/) (requires-python:>=3.8)
2024-02-28T11:15:46,116   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.0-cp37-cp37m-linux_armv6l.whl#sha256=9f537e7c8864ac775ed3296298adfc6b0d90fe6c87b9b1ded64bcaaa26dfdb45 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,117   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.0-cp37-cp37m-linux_armv7l.whl#sha256=9f537e7c8864ac775ed3296298adfc6b0d90fe6c87b9b1ded64bcaaa26dfdb45 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,117   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.0-cp39-cp39-linux_armv6l.whl#sha256=28d116c9a0b6d006ff3b257b99a35423c834410d9d40b24887d06ba89b6c9a78 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,118   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.0-cp39-cp39-linux_armv7l.whl#sha256=28d116c9a0b6d006ff3b257b99a35423c834410d9d40b24887d06ba89b6c9a78 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,119   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.0-cp311-cp311-linux_armv6l.whl#sha256=8c0266596f3b4008cfc575b341bfba7041331290eb1079007b221237fda0ea1f (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,120   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.5.0-cp311-cp311-linux_armv7l.whl#sha256=8c0266596f3b4008cfc575b341bfba7041331290eb1079007b221237fda0ea1f (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,120   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp39-cp39-linux_armv6l.whl#sha256=cf12ec38c08489ab3442a6bfb22e51ec2ce71637c16664f56a6bbc9b29d183b1 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,121   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp39-cp39-linux_armv7l.whl#sha256=cf12ec38c08489ab3442a6bfb22e51ec2ce71637c16664f56a6bbc9b29d183b1 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,122   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp35-cp35m-linux_armv7l.whl#sha256=bc4d3ad7d35fa4d09f2e20958dfb1a3f76fd710a23c6c78f6b8c3be0f2e88f7d (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,123   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp35-cp35m-linux_armv6l.whl#sha256=bc4d3ad7d35fa4d09f2e20958dfb1a3f76fd710a23c6c78f6b8c3be0f2e88f7d (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,124   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp34-cp34m-linux_armv6l.whl#sha256=99dc3c2af7219213a309e3f12d2d8c3f934b29c5315b239bb0af9961aa49c08a (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,124   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp34-cp34m-linux_armv7l.whl#sha256=99dc3c2af7219213a309e3f12d2d8c3f934b29c5315b239bb0af9961aa49c08a (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,125   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp37-cp37m-linux_armv7l.whl#sha256=c6a3ec7a4d78a7a62804cd65b6dad03ffa651dc3442bdb707c44724e9d7b3529 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,126   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp37-cp37m-linux_armv6l.whl#sha256=c6a3ec7a4d78a7a62804cd65b6dad03ffa651dc3442bdb707c44724e9d7b3529 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,126   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp311-cp311-linux_armv6l.whl#sha256=c568869162bc3b37fc31e10830f9d66e17b0986fdbe3e71b44c12fe7cb6544ad (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,127   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.4.0-cp311-cp311-linux_armv7l.whl#sha256=c568869162bc3b37fc31e10830f9d66e17b0986fdbe3e71b44c12fe7cb6544ad (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,128   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp39-cp39-linux_armv6l.whl#sha256=b73f51fd6feb1fa2d01e8ec866ffb942cfeefb981066f427ed80d707d41fd359 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,129   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp39-cp39-linux_armv7l.whl#sha256=b73f51fd6feb1fa2d01e8ec866ffb942cfeefb981066f427ed80d707d41fd359 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,129   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp34-cp34m-linux_armv6l.whl#sha256=e35e212576d5aafe8cd28110a8749e9c8330d18d904567fa567e7d17c0121091 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,130   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp34-cp34m-linux_armv7l.whl#sha256=e35e212576d5aafe8cd28110a8749e9c8330d18d904567fa567e7d17c0121091 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,131   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp35-cp35m-linux_armv7l.whl#sha256=84f1d2f265bee8d91a8182cab52a64bb290b631ded8787c87d2a5b4a6ceda98f (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,132   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp35-cp35m-linux_armv6l.whl#sha256=84f1d2f265bee8d91a8182cab52a64bb290b631ded8787c87d2a5b4a6ceda98f (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,132   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp37-cp37m-linux_armv7l.whl#sha256=79ae005751058c6d0ae8f07d7c27565b8b7047f7b8ed0958e64d9a4cdc7c01d5 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,133   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp37-cp37m-linux_armv6l.whl#sha256=79ae005751058c6d0ae8f07d7c27565b8b7047f7b8ed0958e64d9a4cdc7c01d5 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,134   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp311-cp311-linux_armv6l.whl#sha256=73b8d1eae2507dfeda986154606afc83ac5f058fbd7affe0fc5bd4068ea54977 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,135   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.3.0-cp311-cp311-linux_armv7l.whl#sha256=73b8d1eae2507dfeda986154606afc83ac5f058fbd7affe0fc5bd4068ea54977 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,135   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp35-cp35m-linux_armv7l.whl#sha256=40eb5738abc65a4ea4a541717a09aca225426c06cb36be6be329b3de73e2064a (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,136   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp35-cp35m-linux_armv6l.whl#sha256=40eb5738abc65a4ea4a541717a09aca225426c06cb36be6be329b3de73e2064a (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,137   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp34-cp34m-linux_armv7l.whl#sha256=88138240aa15f771fc6bac93b5091eb076c9a5b2c5b4844f08638fff1ae58fb5 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,137   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp34-cp34m-linux_armv6l.whl#sha256=88138240aa15f771fc6bac93b5091eb076c9a5b2c5b4844f08638fff1ae58fb5 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,138   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp37-cp37m-linux_armv7l.whl#sha256=fa99b21289c1d1395e7213be1f2da83442d04a06839ddb18055832b8fc0cd147 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,139   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp37-cp37m-linux_armv6l.whl#sha256=fa99b21289c1d1395e7213be1f2da83442d04a06839ddb18055832b8fc0cd147 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,139   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp311-cp311-linux_armv6l.whl#sha256=349a30297165ba1a761d367ed1b95e00b84a5bd00b72d310754ef448a6c0f0f8 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,140   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp311-cp311-linux_armv7l.whl#sha256=349a30297165ba1a761d367ed1b95e00b84a5bd00b72d310754ef448a6c0f0f8 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,141   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp39-cp39-linux_armv6l.whl#sha256=d90582d5d32b21b4ed8ea8084798413b2b24635c607cadb2e785c6c8507d0ca0 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,141   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.2.0-cp39-cp39-linux_armv7l.whl#sha256=d90582d5d32b21b4ed8ea8084798413b2b24635c607cadb2e785c6c8507d0ca0 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,142   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp34-cp34m-linux_armv7l.whl#sha256=9b3221fab29e565552ada7c673d9755c2f2471b50f29e9ef750c929b19fa5f89 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,143   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp34-cp34m-linux_armv6l.whl#sha256=9b3221fab29e565552ada7c673d9755c2f2471b50f29e9ef750c929b19fa5f89 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,144   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp35-cp35m-linux_armv6l.whl#sha256=a6ffdf5f12d194952f1aa9b3e71fae04a7d9bef57ac0e1af31093e76746ebf84 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,145   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp35-cp35m-linux_armv7l.whl#sha256=a6ffdf5f12d194952f1aa9b3e71fae04a7d9bef57ac0e1af31093e76746ebf84 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,145   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp37-cp37m-linux_armv6l.whl#sha256=f287657d9a53fd46bb0746640449b12c95fdede071751f9aed47e35abb3b6e4d (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,146   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp37-cp37m-linux_armv7l.whl#sha256=f287657d9a53fd46bb0746640449b12c95fdede071751f9aed47e35abb3b6e4d (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,146   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp311-cp311-linux_armv6l.whl#sha256=9a3125cfc6ec5776f4355bbc88c7f68fb045975781821b8430f94db3fd5b6cc3 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,147   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp311-cp311-linux_armv7l.whl#sha256=9a3125cfc6ec5776f4355bbc88c7f68fb045975781821b8430f94db3fd5b6cc3 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,147   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp39-cp39-linux_armv6l.whl#sha256=51ff0c97bbafd1243a607efae14185a8cded80a107c03a701d6a74f1e8ffdbbc (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,148   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.1.0-cp39-cp39-linux_armv7l.whl#sha256=51ff0c97bbafd1243a607efae14185a8cded80a107c03a701d6a74f1e8ffdbbc (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,149   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp34-cp34m-linux_armv6l.whl#sha256=bb10a9a83274eed0d19b7f7ae2146a7bdba87f572cee50533a338274ed94d544 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,150   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp34-cp34m-linux_armv7l.whl#sha256=bb10a9a83274eed0d19b7f7ae2146a7bdba87f572cee50533a338274ed94d544 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,150   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp35-cp35m-linux_armv6l.whl#sha256=290476b98c5232b8cfa7da3f3ab55cab1daeee460b5c683a6329c47862e59dd5 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,151   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp35-cp35m-linux_armv7l.whl#sha256=290476b98c5232b8cfa7da3f3ab55cab1daeee460b5c683a6329c47862e59dd5 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,152   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp37-cp37m-linux_armv6l.whl#sha256=b8befab0a05b7736d634a7f279404b076b347db1dd59a43d03b3cbe2a92b26f5 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,153   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp37-cp37m-linux_armv7l.whl#sha256=b8befab0a05b7736d634a7f279404b076b347db1dd59a43d03b3cbe2a92b26f5 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,153   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp311-cp311-linux_armv6l.whl#sha256=d691092eb5181b42c73d036ded2f8a1f02b8674d5cb9af3213dd1ac48d4bb5bb (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,154   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp311-cp311-linux_armv7l.whl#sha256=d691092eb5181b42c73d036ded2f8a1f02b8674d5cb9af3213dd1ac48d4bb5bb (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,155   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp39-cp39-linux_armv6l.whl#sha256=aebdb752b6316e4fe49af818624adc8ca4e73cb4b8e6e496b6eb5413e453f395 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,156   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.1-cp39-cp39-linux_armv7l.whl#sha256=aebdb752b6316e4fe49af818624adc8ca4e73cb4b8e6e496b6eb5413e453f395 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,156   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp34-cp34m-linux_armv6l.whl#sha256=99efb16db183cae49bf3225252476b2a114aa8202951ad4beedb456705aaa423 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,157   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp34-cp34m-linux_armv7l.whl#sha256=99efb16db183cae49bf3225252476b2a114aa8202951ad4beedb456705aaa423 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,157   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp35-cp35m-linux_armv7l.whl#sha256=39d01a5d76e0da3ee7e6a69b17bbeefe277dfd5078f2ae7e649d278c488c4d8a (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,158   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp35-cp35m-linux_armv6l.whl#sha256=39d01a5d76e0da3ee7e6a69b17bbeefe277dfd5078f2ae7e649d278c488c4d8a (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,158   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp37-cp37m-linux_armv7l.whl#sha256=d5f3cb2f32922d4dba6072abd7d8ff8bd5d6033c3b85e029c87038c636f2a668 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,159   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp37-cp37m-linux_armv6l.whl#sha256=d5f3cb2f32922d4dba6072abd7d8ff8bd5d6033c3b85e029c87038c636f2a668 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,160   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp311-cp311-linux_armv6l.whl#sha256=d709ee63d27727fc282c51ed593d2d8773e02e8e7f92f81ac96fcacfe139e986 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,160   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp311-cp311-linux_armv7l.whl#sha256=d709ee63d27727fc282c51ed593d2d8773e02e8e7f92f81ac96fcacfe139e986 (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,161   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp39-cp39-linux_armv6l.whl#sha256=36203627d34049fa4bd5f68c5ea5982471d2696e71f6ebf3c2f40be512a0ca8f (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,161   Skipping link: No binaries permitted for ampal: https://www.piwheels.org/simple/ampal/AMPAL-1.0.0-cp39-cp39-linux_armv7l.whl#sha256=36203627d34049fa4bd5f68c5ea5982471d2696e71f6ebf3c2f40be512a0ca8f (from https://www.piwheels.org/simple/ampal/)
2024-02-28T11:15:46,162 Skipping link: not a file: https://www.piwheels.org/simple/ampal/
2024-02-28T11:15:46,163 Skipping link: not a file: https://pypi.org/simple/ampal/
2024-02-28T11:15:46,183 Given no hashes to check 1 links for project 'ampal': discarding no candidates
2024-02-28T11:15:46,203 Collecting ampal==1.5.4
2024-02-28T11:15:46,205   Created temporary directory: /tmp/pip-unpack-5yzr4s5f
2024-02-28T11:15:46,418   Downloading AMPAL-1.5.4.tar.gz (325 kB)
2024-02-28T11:15:46,637   Added ampal==1.5.4 from https://files.pythonhosted.org/packages/b8/ab/3030a61292d0dbc664b49500eb0fef54eb847efe19ce6a21e1564b812491/AMPAL-1.5.4.tar.gz to build tracker '/tmp/pip-build-tracker-xx4p4cv4'
2024-02-28T11:15:46,642   Created temporary directory: /tmp/pip-build-env-jw7qt6fq
2024-02-28T11:15:46,647   Installing build dependencies: started
2024-02-28T11:15:46,649   Running command pip subprocess to install build dependencies
2024-02-28T11:15:47,814   Using pip 23.3.1 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2024-02-28T11:15:48,424   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-02-28T11:15:50,418   Collecting setuptools
2024-02-28T11:15:50,433     Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.1.1-py3-none-any.whl (819 kB)
2024-02-28T11:15:50,652   Collecting wheel
2024-02-28T11:15:57,266     Using cached https://www.piwheels.org/simple/wheel/wheel-0.42.0-py3-none-any.whl (65 kB)
2024-02-28T11:15:58,670   WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'ProtocolError('Connection aborted.', RemoteDisconnected('Remote end closed connection without response'))': /simple/cython/
2024-02-28T11:15:59,144   Collecting Cython
2024-02-28T11:16:02,508     Using cached https://www.piwheels.org/simple/cython/Cython-3.0.8-cp311-cp311-linux_armv7l.whl (11.7 MB)
2024-02-28T11:16:06,392   Installing collected packages: wheel, setuptools, Cython
2024-02-28T11:16:06,629     Creating /tmp/pip-build-env-jw7qt6fq/overlay/local/bin
2024-02-28T11:16:06,631     changing mode of /tmp/pip-build-env-jw7qt6fq/overlay/local/bin/wheel to 755
2024-02-28T11:16:12,661     changing mode of /tmp/pip-build-env-jw7qt6fq/overlay/local/bin/cygdb to 755
2024-02-28T11:16:12,663     changing mode of /tmp/pip-build-env-jw7qt6fq/overlay/local/bin/cython to 755
2024-02-28T11:16:12,665     changing mode of /tmp/pip-build-env-jw7qt6fq/overlay/local/bin/cythonize to 755
2024-02-28T11:16:12,693   Successfully installed Cython-3.0.8 setuptools-69.1.1 wheel-0.42.0

2024-02-28T11:16:13,176   [notice] A new release of pip is available: 23.3.1 -> 24.0
2024-02-28T11:16:13,177   [notice] To update, run: python3 -m pip install --upgrade pip
2024-02-28T11:16:13,537   Installing build dependencies: finished with status 'done'
2024-02-28T11:16:13,540   Getting requirements to build wheel: started
2024-02-28T11:16:13,542   Running command Getting requirements to build wheel
2024-02-28T11:16:15,550   /tmp/pip-build-env-jw7qt6fq/overlay/local/lib/python3.11/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-hw7900yt/ampal_4f50fb3e1ffe4b199fb6c4226426dcf5/src/ampal/geometry.pyx
2024-02-28T11:16:15,550     tree = Parsing.p_module(s, pxd, full_module_name)
2024-02-28T11:16:17,371   Compiling src/ampal/geometry.pyx because it changed.
2024-02-28T11:16:17,373   [1/1] Cythonizing src/ampal/geometry.pyx
2024-02-28T11:16:17,718   Getting requirements to build wheel: finished with status 'done'
2024-02-28T11:16:17,734   Created temporary directory: /tmp/pip-modern-metadata-v6da1nl4
2024-02-28T11:16:17,736   Preparing metadata (pyproject.toml): started
2024-02-28T11:16:17,738   Running command Preparing metadata (pyproject.toml)
2024-02-28T11:16:18,925   /tmp/pip-build-env-jw7qt6fq/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:76: _MissingDynamic: `description` defined outside of `pyproject.toml` is ignored.
2024-02-28T11:16:18,925   !!

2024-02-28T11:16:18,926           ********************************************************************************
2024-02-28T11:16:18,927           The following seems to be defined outside of `pyproject.toml`:

2024-02-28T11:16:18,928           `description = 'A simple framework for representing biomolecular structure.'`

2024-02-28T11:16:18,929           According to the spec (see the link below), however, setuptools CANNOT
2024-02-28T11:16:18,930           consider this value unless `description` is listed as `dynamic`.

2024-02-28T11:16:18,931           https://packaging.python.org/en/latest/specifications/pyproject-toml/#declaring-project-metadata-the-project-table

2024-02-28T11:16:18,932           To prevent this problem, you can list `description` under `dynamic` or alternatively
2024-02-28T11:16:18,933           remove the `[project]` table from your file and rely entirely on other means of
2024-02-28T11:16:18,933           configuration.
2024-02-28T11:16:18,933           ********************************************************************************

2024-02-28T11:16:18,934   !!
2024-02-28T11:16:18,935     _handle_missing_dynamic(dist, project_table)
2024-02-28T11:16:18,936   /tmp/pip-build-env-jw7qt6fq/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:76: _MissingDynamic: `authors` defined outside of `pyproject.toml` is ignored.
2024-02-28T11:16:18,936   !!

2024-02-28T11:16:18,937           ********************************************************************************
2024-02-28T11:16:18,938           The following seems to be defined outside of `pyproject.toml`:

2024-02-28T11:16:18,939           `authors = 'Woolfson Group, University of Bristol'`

2024-02-28T11:16:18,940           According to the spec (see the link below), however, setuptools CANNOT
2024-02-28T11:16:18,940           consider this value unless `authors` is listed as `dynamic`.

2024-02-28T11:16:18,941           https://packaging.python.org/en/latest/specifications/pyproject-toml/#declaring-project-metadata-the-project-table

2024-02-28T11:16:18,942           To prevent this problem, you can list `authors` under `dynamic` or alternatively
2024-02-28T11:16:18,943           remove the `[project]` table from your file and rely entirely on other means of
2024-02-28T11:16:18,944           configuration.
2024-02-28T11:16:18,944           ********************************************************************************

2024-02-28T11:16:18,946   !!
2024-02-28T11:16:18,946     _handle_missing_dynamic(dist, project_table)
2024-02-28T11:16:18,947   /tmp/pip-build-env-jw7qt6fq/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:76: _MissingDynamic: `classifiers` defined outside of `pyproject.toml` is ignored.
2024-02-28T11:16:18,947   !!

2024-02-28T11:16:18,948           ********************************************************************************
2024-02-28T11:16:18,949           The following seems to be defined outside of `pyproject.toml`:

2024-02-28T11:16:18,950           `classifiers = ['Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Natural Language :: English', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Programming Language :: Python :: 3.5', 'Programming Language :: Python :: 3.6']`

2024-02-28T11:16:18,951           According to the spec (see the link below), however, setuptools CANNOT
2024-02-28T11:16:18,952           consider this value unless `classifiers` is listed as `dynamic`.

2024-02-28T11:16:18,953           https://packaging.python.org/en/latest/specifications/pyproject-toml/#declaring-project-metadata-the-project-table

2024-02-28T11:16:18,954           To prevent this problem, you can list `classifiers` under `dynamic` or alternatively
2024-02-28T11:16:18,955           remove the `[project]` table from your file and rely entirely on other means of
2024-02-28T11:16:18,956           configuration.
2024-02-28T11:16:18,956           ********************************************************************************

2024-02-28T11:16:18,957   !!
2024-02-28T11:16:18,958     _handle_missing_dynamic(dist, project_table)
2024-02-28T11:16:18,958   /tmp/pip-build-env-jw7qt6fq/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:83: SetuptoolsWarning: `install_requires` overwritten in `pyproject.toml` (dependencies)
2024-02-28T11:16:18,959     corresp(dist, value, root_dir)
2024-02-28T11:16:19,202   running dist_info
2024-02-28T11:16:19,207   creating /tmp/pip-modern-metadata-v6da1nl4/AMPAL.egg-info
2024-02-28T11:16:19,212   writing /tmp/pip-modern-metadata-v6da1nl4/AMPAL.egg-info/PKG-INFO
2024-02-28T11:16:19,216   writing dependency_links to /tmp/pip-modern-metadata-v6da1nl4/AMPAL.egg-info/dependency_links.txt
2024-02-28T11:16:19,218   writing requirements to /tmp/pip-modern-metadata-v6da1nl4/AMPAL.egg-info/requires.txt
2024-02-28T11:16:19,219   writing top-level names to /tmp/pip-modern-metadata-v6da1nl4/AMPAL.egg-info/top_level.txt
2024-02-28T11:16:19,220   writing manifest file '/tmp/pip-modern-metadata-v6da1nl4/AMPAL.egg-info/SOURCES.txt'
2024-02-28T11:16:19,240   reading manifest file '/tmp/pip-modern-metadata-v6da1nl4/AMPAL.egg-info/SOURCES.txt'
2024-02-28T11:16:19,242   reading manifest template 'MANIFEST.in'
2024-02-28T11:16:19,243   warning: no files found matching 'LICENSE.txt'
2024-02-28T11:16:19,256   adding license file 'LICENSE'
2024-02-28T11:16:19,258   writing manifest file '/tmp/pip-modern-metadata-v6da1nl4/AMPAL.egg-info/SOURCES.txt'
2024-02-28T11:16:19,260   creating '/tmp/pip-modern-metadata-v6da1nl4/AMPAL-1.5.4.dist-info'
2024-02-28T11:16:19,469   Preparing metadata (pyproject.toml): finished with status 'done'
2024-02-28T11:16:19,474   Source in /tmp/pip-wheel-hw7900yt/ampal_4f50fb3e1ffe4b199fb6c4226426dcf5 has version 1.5.4, which satisfies requirement ampal==1.5.4 from https://files.pythonhosted.org/packages/b8/ab/3030a61292d0dbc664b49500eb0fef54eb847efe19ce6a21e1564b812491/AMPAL-1.5.4.tar.gz
2024-02-28T11:16:19,475   Removed ampal==1.5.4 from https://files.pythonhosted.org/packages/b8/ab/3030a61292d0dbc664b49500eb0fef54eb847efe19ce6a21e1564b812491/AMPAL-1.5.4.tar.gz from build tracker '/tmp/pip-build-tracker-xx4p4cv4'
2024-02-28T11:16:19,480 Created temporary directory: /tmp/pip-unpack-i3no8zqr
2024-02-28T11:16:19,481 Created temporary directory: /tmp/pip-unpack-srp5yiws
2024-02-28T11:16:19,487 Building wheels for collected packages: ampal
2024-02-28T11:16:19,492   Created temporary directory: /tmp/pip-wheel-3q9wdiwj
2024-02-28T11:16:19,493   Destination directory: /tmp/pip-wheel-3q9wdiwj
2024-02-28T11:16:19,495   Building wheel for ampal (pyproject.toml): started
2024-02-28T11:16:19,496   Running command Building wheel for ampal (pyproject.toml)
2024-02-28T11:16:20,639   /tmp/pip-build-env-jw7qt6fq/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:76: _MissingDynamic: `description` defined outside of `pyproject.toml` is ignored.
2024-02-28T11:16:20,639   !!

2024-02-28T11:16:20,640           ********************************************************************************
2024-02-28T11:16:20,641           The following seems to be defined outside of `pyproject.toml`:

2024-02-28T11:16:20,642           `description = 'A simple framework for representing biomolecular structure.'`

2024-02-28T11:16:20,643           According to the spec (see the link below), however, setuptools CANNOT
2024-02-28T11:16:20,644           consider this value unless `description` is listed as `dynamic`.

2024-02-28T11:16:20,645           https://packaging.python.org/en/latest/specifications/pyproject-toml/#declaring-project-metadata-the-project-table

2024-02-28T11:16:20,646           To prevent this problem, you can list `description` under `dynamic` or alternatively
2024-02-28T11:16:20,647           remove the `[project]` table from your file and rely entirely on other means of
2024-02-28T11:16:20,647           configuration.
2024-02-28T11:16:20,648           ********************************************************************************

2024-02-28T11:16:20,649   !!
2024-02-28T11:16:20,650     _handle_missing_dynamic(dist, project_table)
2024-02-28T11:16:20,651   /tmp/pip-build-env-jw7qt6fq/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:76: _MissingDynamic: `authors` defined outside of `pyproject.toml` is ignored.
2024-02-28T11:16:20,651   !!

2024-02-28T11:16:20,652           ********************************************************************************
2024-02-28T11:16:20,653           The following seems to be defined outside of `pyproject.toml`:

2024-02-28T11:16:20,655           `authors = 'Woolfson Group, University of Bristol'`

2024-02-28T11:16:20,655           According to the spec (see the link below), however, setuptools CANNOT
2024-02-28T11:16:20,656           consider this value unless `authors` is listed as `dynamic`.

2024-02-28T11:16:20,657           https://packaging.python.org/en/latest/specifications/pyproject-toml/#declaring-project-metadata-the-project-table

2024-02-28T11:16:20,658           To prevent this problem, you can list `authors` under `dynamic` or alternatively
2024-02-28T11:16:20,658           remove the `[project]` table from your file and rely entirely on other means of
2024-02-28T11:16:20,659           configuration.
2024-02-28T11:16:20,659           ********************************************************************************

2024-02-28T11:16:20,660   !!
2024-02-28T11:16:20,661     _handle_missing_dynamic(dist, project_table)
2024-02-28T11:16:20,661   /tmp/pip-build-env-jw7qt6fq/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:76: _MissingDynamic: `classifiers` defined outside of `pyproject.toml` is ignored.
2024-02-28T11:16:20,662   !!

2024-02-28T11:16:20,663           ********************************************************************************
2024-02-28T11:16:20,663           The following seems to be defined outside of `pyproject.toml`:

2024-02-28T11:16:20,664           `classifiers = ['Intended Audience :: Science/Research', 'License :: OSI Approved :: MIT License', 'Natural Language :: English', 'Topic :: Scientific/Engineering :: Bio-Informatics', 'Programming Language :: Python :: 3.5', 'Programming Language :: Python :: 3.6']`

2024-02-28T11:16:20,665           According to the spec (see the link below), however, setuptools CANNOT
2024-02-28T11:16:20,666           consider this value unless `classifiers` is listed as `dynamic`.

2024-02-28T11:16:20,667           https://packaging.python.org/en/latest/specifications/pyproject-toml/#declaring-project-metadata-the-project-table

2024-02-28T11:16:20,668           To prevent this problem, you can list `classifiers` under `dynamic` or alternatively
2024-02-28T11:16:20,669           remove the `[project]` table from your file and rely entirely on other means of
2024-02-28T11:16:20,669           configuration.
2024-02-28T11:16:20,670           ********************************************************************************

2024-02-28T11:16:20,671   !!
2024-02-28T11:16:20,672     _handle_missing_dynamic(dist, project_table)
2024-02-28T11:16:20,672   /tmp/pip-build-env-jw7qt6fq/overlay/local/lib/python3.11/dist-packages/setuptools/config/_apply_pyprojecttoml.py:83: SetuptoolsWarning: `install_requires` overwritten in `pyproject.toml` (dependencies)
2024-02-28T11:16:20,673     corresp(dist, value, root_dir)
2024-02-28T11:16:20,884   running bdist_wheel
2024-02-28T11:16:20,902   running build
2024-02-28T11:16:20,903   running build_py
2024-02-28T11:16:20,908   creating build
2024-02-28T11:16:20,908   creating build/lib.linux-armv7l-cpython-311
2024-02-28T11:16:20,909   creating build/lib.linux-armv7l-cpython-311/ampal
2024-02-28T11:16:20,910   copying src/ampal/ampal_warnings.py -> build/lib.linux-armv7l-cpython-311/ampal
2024-02-28T11:16:20,912   copying src/ampal/dssp.py -> build/lib.linux-armv7l-cpython-311/ampal
2024-02-28T11:16:20,914   copying src/ampal/assembly.py -> build/lib.linux-armv7l-cpython-311/ampal
2024-02-28T11:16:20,917   copying src/ampal/base_ampal.py -> build/lib.linux-armv7l-cpython-311/ampal
2024-02-28T11:16:20,919   copying src/ampal/interactions.py -> build/lib.linux-armv7l-cpython-311/ampal
2024-02-28T11:16:20,922   copying src/ampal/naccess.py -> build/lib.linux-armv7l-cpython-311/ampal
2024-02-28T11:16:20,924   copying src/ampal/pseudo_atoms.py -> build/lib.linux-armv7l-cpython-311/ampal
2024-02-28T11:16:20,926   copying src/ampal/ligands.py -> build/lib.linux-armv7l-cpython-311/ampal
2024-02-28T11:16:20,928   copying src/ampal/analyse_protein.py -> build/lib.linux-armv7l-cpython-311/ampal
2024-02-28T11:16:20,930   copying src/ampal/data.py -> build/lib.linux-armv7l-cpython-311/ampal
2024-02-28T11:16:20,932   copying src/ampal/__init__.py -> build/lib.linux-armv7l-cpython-311/ampal
2024-02-28T11:16:20,933   copying src/ampal/nucleic_acid.py -> build/lib.linux-armv7l-cpython-311/ampal
2024-02-28T11:16:20,935   copying src/ampal/protein.py -> build/lib.linux-armv7l-cpython-311/ampal
2024-02-28T11:16:20,938   copying src/ampal/pdb_parser.py -> build/lib.linux-armv7l-cpython-311/ampal
2024-02-28T11:16:20,940   copying src/ampal/align.py -> build/lib.linux-armv7l-cpython-311/ampal
2024-02-28T11:16:20,942   copying src/ampal/amino_acids.py -> build/lib.linux-armv7l-cpython-311/ampal
2024-02-28T11:16:20,944   running egg_info
2024-02-28T11:16:20,948   writing src/AMPAL.egg-info/PKG-INFO
2024-02-28T11:16:20,950   writing dependency_links to src/AMPAL.egg-info/dependency_links.txt
2024-02-28T11:16:20,952   writing requirements to src/AMPAL.egg-info/requires.txt
2024-02-28T11:16:20,953   writing top-level names to src/AMPAL.egg-info/top_level.txt
2024-02-28T11:16:20,962   reading manifest file 'src/AMPAL.egg-info/SOURCES.txt'
2024-02-28T11:16:20,964   reading manifest template 'MANIFEST.in'
2024-02-28T11:16:20,965   warning: no files found matching 'LICENSE.txt'
2024-02-28T11:16:20,976   adding license file 'LICENSE'
2024-02-28T11:16:20,979   writing manifest file 'src/AMPAL.egg-info/SOURCES.txt'
2024-02-28T11:16:20,981   /tmp/pip-build-env-jw7qt6fq/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'ampal.datafiles' is absent from the `packages` configuration.
2024-02-28T11:16:20,982   !!

2024-02-28T11:16:20,983           ********************************************************************************
2024-02-28T11:16:20,984           ############################
2024-02-28T11:16:20,984           # Package would be ignored #
2024-02-28T11:16:20,985           ############################
2024-02-28T11:16:20,985           Python recognizes 'ampal.datafiles' as an importable package[^1],
2024-02-28T11:16:20,986           but it is absent from setuptools' `packages` configuration.

2024-02-28T11:16:20,988           This leads to an ambiguous overall configuration. If you want to distribute this
2024-02-28T11:16:20,988           package, please make sure that 'ampal.datafiles' is explicitly added
2024-02-28T11:16:20,989           to the `packages` configuration field.

2024-02-28T11:16:20,990           Alternatively, you can also rely on setuptools' discovery methods
2024-02-28T11:16:20,991           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-02-28T11:16:20,992           instead of `find_packages(...)`/`find:`).

2024-02-28T11:16:21,003           You can read more about "package discovery" on setuptools documentation page:

2024-02-28T11:16:21,013           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-02-28T11:16:21,014           If you don't want 'ampal.datafiles' to be distributed and are
2024-02-28T11:16:21,015           already explicitly excluding 'ampal.datafiles' via
2024-02-28T11:16:21,016           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-02-28T11:16:21,016           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-02-28T11:16:21,017           combination with a more fine grained `package-data` configuration.

2024-02-28T11:16:21,018           You can read more about "package data files" on setuptools documentation page:

2024-02-28T11:16:21,019           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-02-28T11:16:21,021           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-02-28T11:16:21,022                 even if it does not contain any `.py` files.
2024-02-28T11:16:21,023                 On the other hand, currently there is no concept of package data
2024-02-28T11:16:21,023                 directory, all directories are treated like packages.
2024-02-28T11:16:21,024           ********************************************************************************

2024-02-28T11:16:21,025   !!
2024-02-28T11:16:21,026     check.warn(importable)
2024-02-28T11:16:21,026   copying src/ampal/geometry.c -> build/lib.linux-armv7l-cpython-311/ampal
2024-02-28T11:16:21,026   copying src/ampal/geometry.pyx -> build/lib.linux-armv7l-cpython-311/ampal
2024-02-28T11:16:21,027   creating build/lib.linux-armv7l-cpython-311/ampal/datafiles
2024-02-28T11:16:21,028   copying src/ampal/datafiles/amino_acids.json -> build/lib.linux-armv7l-cpython-311/ampal/datafiles
2024-02-28T11:16:21,028   copying src/ampal/datafiles/chemical_elements.json -> build/lib.linux-armv7l-cpython-311/ampal/datafiles
2024-02-28T11:16:21,030   copying src/ampal/datafiles/pdb_atom_column_format.json -> build/lib.linux-armv7l-cpython-311/ampal/datafiles
2024-02-28T11:16:21,034   running build_ext
2024-02-28T11:16:21,040   building 'ampal.geometry' extension
2024-02-28T11:16:21,041   creating build/temp.linux-armv7l-cpython-311
2024-02-28T11:16:21,041   creating build/temp.linux-armv7l-cpython-311/src
2024-02-28T11:16:21,042   creating build/temp.linux-armv7l-cpython-311/src/ampal
2024-02-28T11:16:21,043   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/include/python3.11 -c src/ampal/geometry.c -o build/temp.linux-armv7l-cpython-311/src/ampal/geometry.o
2024-02-28T11:16:26,986   src/ampal/geometry.c:7370:18: warning: ‘__pyx_f_5ampal_8geometry__unit_vector’ defined but not used [-Wunused-function]
2024-02-28T11:16:26,986    7370 | static PyObject *__pyx_f_5ampal_8geometry__unit_vector(double *__pyx_v_a) {
2024-02-28T11:16:26,987         |                  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2024-02-28T11:16:26,992   src/ampal/geometry.c:6449:15: warning: ‘__pyx_f_5ampal_8geometry__dot_product_2d’ defined but not used [-Wunused-function]
2024-02-28T11:16:26,993    6449 | static double __pyx_f_5ampal_8geometry__dot_product_2d(double *__pyx_v_a, double *__pyx_v_b) {
2024-02-28T11:16:26,994         |               ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2024-02-28T11:17:54,252   arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/src/ampal/geometry.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/ampal/geometry.cpython-311-arm-linux-gnueabihf.so
2024-02-28T11:17:54,450   installing to build/bdist.linux-armv7l/wheel
2024-02-28T11:17:54,451   running install
2024-02-28T11:17:54,474   running install_lib
2024-02-28T11:17:54,479   creating build/bdist.linux-armv7l
2024-02-28T11:17:54,480   creating build/bdist.linux-armv7l/wheel
2024-02-28T11:17:54,482   creating build/bdist.linux-armv7l/wheel/ampal
2024-02-28T11:17:54,483   copying build/lib.linux-armv7l-cpython-311/ampal/ampal_warnings.py -> build/bdist.linux-armv7l/wheel/ampal
2024-02-28T11:17:54,485   copying build/lib.linux-armv7l-cpython-311/ampal/dssp.py -> build/bdist.linux-armv7l/wheel/ampal
2024-02-28T11:17:54,488   copying build/lib.linux-armv7l-cpython-311/ampal/assembly.py -> build/bdist.linux-armv7l/wheel/ampal
2024-02-28T11:17:54,490   copying build/lib.linux-armv7l-cpython-311/ampal/geometry.c -> build/bdist.linux-armv7l/wheel/ampal
2024-02-28T11:17:54,527   copying build/lib.linux-armv7l-cpython-311/ampal/geometry.pyx -> build/bdist.linux-armv7l/wheel/ampal
2024-02-28T11:17:54,530   copying build/lib.linux-armv7l-cpython-311/ampal/base_ampal.py -> build/bdist.linux-armv7l/wheel/ampal
2024-02-28T11:17:54,532   copying build/lib.linux-armv7l-cpython-311/ampal/interactions.py -> build/bdist.linux-armv7l/wheel/ampal
2024-02-28T11:17:54,535   copying build/lib.linux-armv7l-cpython-311/ampal/naccess.py -> build/bdist.linux-armv7l/wheel/ampal
2024-02-28T11:17:54,537   copying build/lib.linux-armv7l-cpython-311/ampal/pseudo_atoms.py -> build/bdist.linux-armv7l/wheel/ampal
2024-02-28T11:17:54,539   copying build/lib.linux-armv7l-cpython-311/ampal/ligands.py -> build/bdist.linux-armv7l/wheel/ampal
2024-02-28T11:17:54,541   copying build/lib.linux-armv7l-cpython-311/ampal/analyse_protein.py -> build/bdist.linux-armv7l/wheel/ampal
2024-02-28T11:17:54,544   copying build/lib.linux-armv7l-cpython-311/ampal/data.py -> build/bdist.linux-armv7l/wheel/ampal
2024-02-28T11:17:54,546   copying build/lib.linux-armv7l-cpython-311/ampal/__init__.py -> build/bdist.linux-armv7l/wheel/ampal
2024-02-28T11:17:54,547   copying build/lib.linux-armv7l-cpython-311/ampal/nucleic_acid.py -> build/bdist.linux-armv7l/wheel/ampal
2024-02-28T11:17:54,549   copying build/lib.linux-armv7l-cpython-311/ampal/protein.py -> build/bdist.linux-armv7l/wheel/ampal
2024-02-28T11:17:54,552   creating build/bdist.linux-armv7l/wheel/ampal/datafiles
2024-02-28T11:17:54,553   copying build/lib.linux-armv7l-cpython-311/ampal/datafiles/chemical_elements.json -> build/bdist.linux-armv7l/wheel/ampal/datafiles
2024-02-28T11:17:54,557   copying build/lib.linux-armv7l-cpython-311/ampal/datafiles/amino_acids.json -> build/bdist.linux-armv7l/wheel/ampal/datafiles
2024-02-28T11:17:54,560   copying build/lib.linux-armv7l-cpython-311/ampal/datafiles/pdb_atom_column_format.json -> build/bdist.linux-armv7l/wheel/ampal/datafiles
2024-02-28T11:17:54,564   copying build/lib.linux-armv7l-cpython-311/ampal/geometry.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/ampal
2024-02-28T11:17:54,609   copying build/lib.linux-armv7l-cpython-311/ampal/pdb_parser.py -> build/bdist.linux-armv7l/wheel/ampal
2024-02-28T11:17:54,611   copying build/lib.linux-armv7l-cpython-311/ampal/align.py -> build/bdist.linux-armv7l/wheel/ampal
2024-02-28T11:17:54,613   copying build/lib.linux-armv7l-cpython-311/ampal/amino_acids.py -> build/bdist.linux-armv7l/wheel/ampal
2024-02-28T11:17:54,616   running install_egg_info
2024-02-28T11:17:54,620   Copying src/AMPAL.egg-info to build/bdist.linux-armv7l/wheel/AMPAL-1.5.4-py3.11.egg-info
2024-02-28T11:17:54,632   running install_scripts
2024-02-28T11:17:54,677   creating build/bdist.linux-armv7l/wheel/AMPAL-1.5.4.dist-info/WHEEL
2024-02-28T11:17:54,680   creating '/tmp/pip-wheel-3q9wdiwj/.tmp-sncfseus/AMPAL-1.5.4-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-02-28T11:17:54,683   adding 'ampal/__init__.py'
2024-02-28T11:17:54,685   adding 'ampal/align.py'
2024-02-28T11:17:54,687   adding 'ampal/amino_acids.py'
2024-02-28T11:17:54,689   adding 'ampal/ampal_warnings.py'
2024-02-28T11:17:54,692   adding 'ampal/analyse_protein.py'
2024-02-28T11:17:54,695   adding 'ampal/assembly.py'
2024-02-28T11:17:54,698   adding 'ampal/base_ampal.py'
2024-02-28T11:17:54,700   adding 'ampal/data.py'
2024-02-28T11:17:54,701   adding 'ampal/dssp.py'
2024-02-28T11:17:54,833   adding 'ampal/geometry.c'
2024-02-28T11:17:55,333   adding 'ampal/geometry.cpython-311-arm-linux-gnueabihf.so'
2024-02-28T11:17:55,355   adding 'ampal/geometry.pyx'
2024-02-28T11:17:55,356   adding 'ampal/interactions.py'
2024-02-28T11:17:55,358   adding 'ampal/ligands.py'
2024-02-28T11:17:55,359   adding 'ampal/naccess.py'
2024-02-28T11:17:55,361   adding 'ampal/nucleic_acid.py'
2024-02-28T11:17:55,363   adding 'ampal/pdb_parser.py'
2024-02-28T11:17:55,368   adding 'ampal/protein.py'
2024-02-28T11:17:55,370   adding 'ampal/pseudo_atoms.py'
2024-02-28T11:17:55,377   adding 'ampal/datafiles/amino_acids.json'
2024-02-28T11:17:55,381   adding 'ampal/datafiles/chemical_elements.json'
2024-02-28T11:17:55,399   adding 'ampal/datafiles/pdb_atom_column_format.json'
2024-02-28T11:17:55,400   adding 'AMPAL-1.5.4.dist-info/LICENSE'
2024-02-28T11:17:55,402   adding 'AMPAL-1.5.4.dist-info/METADATA'
2024-02-28T11:17:55,402   adding 'AMPAL-1.5.4.dist-info/WHEEL'
2024-02-28T11:17:55,403   adding 'AMPAL-1.5.4.dist-info/top_level.txt'
2024-02-28T11:17:55,404   adding 'AMPAL-1.5.4.dist-info/RECORD'
2024-02-28T11:17:55,420   removing build/bdist.linux-armv7l/wheel
2024-02-28T11:17:55,592   Building wheel for ampal (pyproject.toml): finished with status 'done'
2024-02-28T11:17:55,634   Created wheel for ampal: filename=AMPAL-1.5.4-cp311-cp311-linux_armv7l.whl size=1354317 sha256=268bbf9f3905f4454d51628f191ae519863d7695d816e19e3b90a954028c3f6b
2024-02-28T11:17:55,636   Stored in directory: /tmp/pip-ephem-wheel-cache-yp3ssjbd/wheels/25/61/75/bb073b9e0095f21ca1c571d9e9f2fb4635b5da1e96598c9eea
2024-02-28T11:17:55,647 Successfully built ampal
2024-02-28T11:17:55,686 Removed build tracker: '/tmp/pip-build-tracker-xx4p4cv4'