2024-03-01T05:51:53,926 Created temporary directory: /tmp/pip-build-tracker-wyfxmqt7
2024-03-01T05:51:53,930 Initialized build tracking at /tmp/pip-build-tracker-wyfxmqt7
2024-03-01T05:51:53,930 Created build tracker: /tmp/pip-build-tracker-wyfxmqt7
2024-03-01T05:51:53,931 Entered build tracker: /tmp/pip-build-tracker-wyfxmqt7
2024-03-01T05:51:53,932 Created temporary directory: /tmp/pip-wheel-ig2k7_7v
2024-03-01T05:51:53,943 Created temporary directory: /tmp/pip-ephem-wheel-cache-p1gwlbqb
2024-03-01T05:51:54,000 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-03-01T05:51:54,013 2 location(s) to search for versions of funannotate:
2024-03-01T05:51:54,013 * https://pypi.org/simple/funannotate/
2024-03-01T05:51:54,013 * https://www.piwheels.org/simple/funannotate/
2024-03-01T05:51:54,015 Fetching project page and analyzing links: https://pypi.org/simple/funannotate/
2024-03-01T05:51:54,016 Getting page https://pypi.org/simple/funannotate/
2024-03-01T05:51:54,019 Found index url https://pypi.org/simple/
2024-03-01T05:51:54,131 Fetched page https://pypi.org/simple/funannotate/ as application/vnd.pypi.simple.v1+json
2024-03-01T05:51:54,147   Skipping link: No binaries permitted for funannotate: https://files.pythonhosted.org/packages/c9/8d/7d6f3ac96684c786f2dca70902675c1526b943586d93c274f2c1544eb254/funannotate-1.7.0-py2.py3-none-any.whl (from https://pypi.org/simple/funannotate/) (requires-python:>=2.7.0, <3)
2024-03-01T05:51:54,149   Link requires a different Python (3.7.3 not in: '>=2.7.0, <3'): https://files.pythonhosted.org/packages/82/19/16a044299d0e5ae7f0f5bdc9d3e966b6a99eed2a5ad004cf4d64478b0a59/funannotate-1.7.0.tar.gz (from https://pypi.org/simple/funannotate/) (requires-python:>=2.7.0, <3)
2024-03-01T05:51:54,149   Skipping link: 1.7.0 Requires-Python >=2.7.0, <3: https://files.pythonhosted.org/packages/82/19/16a044299d0e5ae7f0f5bdc9d3e966b6a99eed2a5ad004cf4d64478b0a59/funannotate-1.7.0.tar.gz (from https://pypi.org/simple/funannotate/) (requires-python:>=2.7.0, <3)
2024-03-01T05:51:54,150   Skipping link: No binaries permitted for funannotate: https://files.pythonhosted.org/packages/65/58/c7195ce3515b0b4442d63c1e417bce97fd55dc512405d737ae475f4e020f/funannotate-1.7.1-py2.py3-none-any.whl (from https://pypi.org/simple/funannotate/) (requires-python:>=2.7.0, <3)
2024-03-01T05:51:54,151   Link requires a different Python (3.7.3 not in: '>=2.7.0, <3'): https://files.pythonhosted.org/packages/6a/fd/0e2380e13baa566c83ff90a6168df9f6caaf85f4d43df6a10d29b6c6cd7e/funannotate-1.7.1.tar.gz (from https://pypi.org/simple/funannotate/) (requires-python:>=2.7.0, <3)
2024-03-01T05:51:54,152   Skipping link: 1.7.1 Requires-Python >=2.7.0, <3: https://files.pythonhosted.org/packages/6a/fd/0e2380e13baa566c83ff90a6168df9f6caaf85f4d43df6a10d29b6c6cd7e/funannotate-1.7.1.tar.gz (from https://pypi.org/simple/funannotate/) (requires-python:>=2.7.0, <3)
2024-03-01T05:51:54,152   Skipping link: No binaries permitted for funannotate: https://files.pythonhosted.org/packages/9b/74/9e62526f72840a41add434ed5ff9f3adf30ea0bdbcd37c0298db816cd0a6/funannotate-1.7.2-py2.py3-none-any.whl (from https://pypi.org/simple/funannotate/) (requires-python:>=2.7.0, <3)
2024-03-01T05:51:54,154   Link requires a different Python (3.7.3 not in: '>=2.7.0, <3'): https://files.pythonhosted.org/packages/f1/89/473471b2d969166612963b032b004c192ff16c924198e0318448c9d5b166/funannotate-1.7.2.tar.gz (from https://pypi.org/simple/funannotate/) (requires-python:>=2.7.0, <3)
2024-03-01T05:51:54,154   Skipping link: 1.7.2 Requires-Python >=2.7.0, <3: https://files.pythonhosted.org/packages/f1/89/473471b2d969166612963b032b004c192ff16c924198e0318448c9d5b166/funannotate-1.7.2.tar.gz (from https://pypi.org/simple/funannotate/) (requires-python:>=2.7.0, <3)
2024-03-01T05:51:54,155   Skipping link: No binaries permitted for funannotate: https://files.pythonhosted.org/packages/f0/f2/9e5c20255ae4846c0ba77cd1486b0337ad407c49dc3f04f4c58af8e99689/funannotate-1.7.3-py2.py3-none-any.whl (from https://pypi.org/simple/funannotate/) (requires-python:>=2.7.0, <3)
2024-03-01T05:51:54,156   Link requires a different Python (3.7.3 not in: '>=2.7.0, <3'): https://files.pythonhosted.org/packages/cb/b0/aa1deef2eef5f0385575e2e00da6c5073dcb38c77fbe344040c84965b044/funannotate-1.7.3.tar.gz (from https://pypi.org/simple/funannotate/) (requires-python:>=2.7.0, <3)
2024-03-01T05:51:54,157   Skipping link: 1.7.3 Requires-Python >=2.7.0, <3: https://files.pythonhosted.org/packages/cb/b0/aa1deef2eef5f0385575e2e00da6c5073dcb38c77fbe344040c84965b044/funannotate-1.7.3.tar.gz (from https://pypi.org/simple/funannotate/) (requires-python:>=2.7.0, <3)
2024-03-01T05:51:54,157   Skipping link: No binaries permitted for funannotate: https://files.pythonhosted.org/packages/1e/d9/24ef671e14abdda21fc8eed5304bbd50097b3c3ee36e6740aa16d9f862b1/funannotate-1.7.4-py2.py3-none-any.whl (from https://pypi.org/simple/funannotate/) (requires-python:>=2.7.0, <3)
2024-03-01T05:51:54,158   Link requires a different Python (3.7.3 not in: '>=2.7.0, <3'): https://files.pythonhosted.org/packages/14/52/8c151d871b7a402a7429829c98e9f1f17d63f55d10f2cbf50d043b6ca19f/funannotate-1.7.4.tar.gz (from https://pypi.org/simple/funannotate/) (requires-python:>=2.7.0, <3)
2024-03-01T05:51:54,159   Skipping link: 1.7.4 Requires-Python >=2.7.0, <3: https://files.pythonhosted.org/packages/14/52/8c151d871b7a402a7429829c98e9f1f17d63f55d10f2cbf50d043b6ca19f/funannotate-1.7.4.tar.gz (from https://pypi.org/simple/funannotate/) (requires-python:>=2.7.0, <3)
2024-03-01T05:51:54,159   Skipping link: No binaries permitted for funannotate: https://files.pythonhosted.org/packages/fa/9b/7ab195d33d62835b1014cbc84c9c411cbb105cabb6dc27655e00785585fe/funannotate-1.8.1-py2.py3-none-any.whl (from https://pypi.org/simple/funannotate/) (requires-python:>=2.7.0, !=3.0.*, !=3.1.*, !=3.2.*, <4)
2024-03-01T05:51:54,162   Found link https://files.pythonhosted.org/packages/d8/8d/b2b8e37805837ac3a29338f950c052320f4cf06c4ddac50722441897ae84/funannotate-1.8.1.tar.gz (from https://pypi.org/simple/funannotate/) (requires-python:>=2.7.0, !=3.0.*, !=3.1.*, !=3.2.*, <4), version: 1.8.1
2024-03-01T05:51:54,163   Skipping link: No binaries permitted for funannotate: https://files.pythonhosted.org/packages/49/a7/140719eb61b47ac12d50df37ea8e82affa4132f586aee5b5188be62d979c/funannotate-1.8.3-py2.py3-none-any.whl (from https://pypi.org/simple/funannotate/) (requires-python:>=2.7.0, !=3.0.*, !=3.1.*, !=3.2.*, <4)
2024-03-01T05:51:54,166   Found link https://files.pythonhosted.org/packages/44/bb/70ee791e4f81377915935c1abc118ec14e00ce79ed3b3abb5cf924ccd2c2/funannotate-1.8.3.tar.gz (from https://pypi.org/simple/funannotate/) (requires-python:>=2.7.0, !=3.0.*, !=3.1.*, !=3.2.*, <4), version: 1.8.3
2024-03-01T05:51:54,166   Skipping link: No binaries permitted for funannotate: https://files.pythonhosted.org/packages/b6/5c/45c7fd0e67ac8468c6321ab612cba5108ecbd633b3e34d869c3a18152a9e/funannotate-1.8.5-py3-none-any.whl (from https://pypi.org/simple/funannotate/) (requires-python:>=2.7.0, !=3.0.*, !=3.1.*, !=3.2.*, <4)
2024-03-01T05:51:54,169   Found link https://files.pythonhosted.org/packages/66/8c/a0a783f8d21cb6a05000390fdff8e19282484d940d1af5002c191b19023f/funannotate-1.8.5.tar.gz (from https://pypi.org/simple/funannotate/) (requires-python:>=2.7.0, !=3.0.*, !=3.1.*, !=3.2.*, <4), version: 1.8.5
2024-03-01T05:51:54,170   Skipping link: No binaries permitted for funannotate: https://files.pythonhosted.org/packages/bf/51/e33e6aa2aff6e98f3520377838a00383840584d28decc23d0d21f6f22927/funannotate-1.8.7-py3-none-any.whl (from https://pypi.org/simple/funannotate/) (requires-python:>=3.6.0, <3.9)
2024-03-01T05:51:54,171   Found link https://files.pythonhosted.org/packages/17/79/37b08c79eba35cea7873315f59d439b226c3c97ca56215696ec3f3d8ba4e/funannotate-1.8.7.tar.gz (from https://pypi.org/simple/funannotate/) (requires-python:>=3.6.0, <3.9), version: 1.8.7
2024-03-01T05:51:54,172   Skipping link: No binaries permitted for funannotate: https://files.pythonhosted.org/packages/4f/14/74e79d16bdfadb4541aaf332a799bc9352a3575f6d7a5c9d88dcbb0f27fd/funannotate-1.8.9-py3-none-any.whl (from https://pypi.org/simple/funannotate/) (requires-python:>=3.6.0, <3.9)
2024-03-01T05:51:54,174   Found link https://files.pythonhosted.org/packages/fe/24/9d6c5949bb2c5c3382a0a9549845bf7d28cec6c34054f71daba5bde22a6e/funannotate-1.8.9.tar.gz (from https://pypi.org/simple/funannotate/) (requires-python:>=3.6.0, <3.9), version: 1.8.9
2024-03-01T05:51:54,174   Skipping link: No binaries permitted for funannotate: https://files.pythonhosted.org/packages/3f/64/f68ed074713610343c780787bd8aed8016a47e76558290bf7a1d1606f81a/funannotate-1.8.11-py3-none-any.whl (from https://pypi.org/simple/funannotate/) (requires-python:>=3.6.0, <3.10)
2024-03-01T05:51:54,176   Found link https://files.pythonhosted.org/packages/d4/8e/515c995044e6f11f4ccc7b951a344e45701c5fbaff91b2bd60f303497636/funannotate-1.8.11.tar.gz (from https://pypi.org/simple/funannotate/) (requires-python:>=3.6.0, <3.10), version: 1.8.11
2024-03-01T05:51:54,177   Skipping link: No binaries permitted for funannotate: https://files.pythonhosted.org/packages/d3/6f/9546c721cb5cd6c0a997b54a46c539a44816954cfec3444781e8b8e0cbe1/funannotate-1.8.13-py3-none-any.whl (from https://pypi.org/simple/funannotate/) (requires-python:>=3.6.0, <3.10)
2024-03-01T05:51:54,178   Found link https://files.pythonhosted.org/packages/fd/22/c45a56220c5f83707794e6429051b44a5296fb9cb868ef6d2974ae7a3f3c/funannotate-1.8.13.tar.gz (from https://pypi.org/simple/funannotate/) (requires-python:>=3.6.0, <3.10), version: 1.8.13
2024-03-01T05:51:54,179   Skipping link: No binaries permitted for funannotate: https://files.pythonhosted.org/packages/e7/c1/7ac7bdfb9962f47679d4b8a70e9d7e1c8371dbae8d819c57834eea16636d/funannotate-1.8.15-py3-none-any.whl (from https://pypi.org/simple/funannotate/) (requires-python:>=3.6.0, <3.10)
2024-03-01T05:51:54,181   Found link https://files.pythonhosted.org/packages/64/2a/ba75c916f152dbcada5675013cff161a85e96b358b50a592fd24c9bf6cee/funannotate-1.8.15.tar.gz (from https://pypi.org/simple/funannotate/) (requires-python:>=3.6.0, <3.10), version: 1.8.15
2024-03-01T05:51:54,181   Skipping link: No binaries permitted for funannotate: https://files.pythonhosted.org/packages/d7/b4/e2818055cccf699137f1ce430f86651854c75c71fe659ea898924a5f5d9b/funannotate-1.8.17-py3-none-any.whl (from https://pypi.org/simple/funannotate/) (requires-python:>=3.6.0, <3.10)
2024-03-01T05:51:54,183   Found link https://files.pythonhosted.org/packages/d3/74/32189028b9dc0e94d746c6a6de89e29dbb535a6ec76b08a204fed56fb65d/funannotate-1.8.17.tar.gz (from https://pypi.org/simple/funannotate/) (requires-python:>=3.6.0, <3.10), version: 1.8.17
2024-03-01T05:51:54,184 Fetching project page and analyzing links: https://www.piwheels.org/simple/funannotate/
2024-03-01T05:51:54,185 Getting page https://www.piwheels.org/simple/funannotate/
2024-03-01T05:51:54,187 Found index url https://www.piwheels.org/simple/
2024-03-01T05:51:54,595 Fetched page https://www.piwheels.org/simple/funannotate/ as text/html
2024-03-01T05:51:54,604   Skipping link: No binaries permitted for funannotate: https://www.piwheels.org/simple/funannotate/funannotate-1.8.15-py3-none-any.whl#sha256=4c16def029502cc442f827338a8821a98e42e01a3e78943c04e3143e6cf9bb17 (from https://www.piwheels.org/simple/funannotate/) (requires-python:>=3.6.0, <3.10)
2024-03-01T05:51:54,604   Skipping link: No binaries permitted for funannotate: https://www.piwheels.org/simple/funannotate/funannotate-1.8.13-py3-none-any.whl#sha256=233147a319c6c165b07b3c5327b706cf98f038e313cb4a537c9cd84d5143101c (from https://www.piwheels.org/simple/funannotate/) (requires-python:>=3.6.0, <3.10)
2024-03-01T05:51:54,605   Skipping link: No binaries permitted for funannotate: https://www.piwheels.org/simple/funannotate/funannotate-1.8.11-py3-none-any.whl#sha256=2f5e1f30ad5cf7a1ccc61165ff6a31e4dfa70bdf8a17364f1b11a9c3c34dc4dd (from https://www.piwheels.org/simple/funannotate/) (requires-python:>=3.6.0, <3.10)
2024-03-01T05:51:54,605   Skipping link: No binaries permitted for funannotate: https://www.piwheels.org/simple/funannotate/funannotate-1.8.9-py3-none-any.whl#sha256=e43ddc7b2031a1aa724848742bc45a80e59b9c6c6f7da65c29aa6bd95e9247a0 (from https://www.piwheels.org/simple/funannotate/) (requires-python:>=3.6.0, <3.9)
2024-03-01T05:51:54,606   Skipping link: No binaries permitted for funannotate: https://www.piwheels.org/simple/funannotate/funannotate-1.8.7-py3-none-any.whl#sha256=ccace79ee27eec6daa8a564e34d753ea047c4e39f3605391e06622cc6c486d7c (from https://www.piwheels.org/simple/funannotate/) (requires-python:>=3.6.0, <3.9)
2024-03-01T05:51:54,606   Skipping link: No binaries permitted for funannotate: https://www.piwheels.org/simple/funannotate/funannotate-1.8.5-py3-none-any.whl#sha256=eeecff5014f4dbe8c91fe2b85cc437560fbc49b3a40773ce88f720f7a7ad3bb5 (from https://www.piwheels.org/simple/funannotate/) (requires-python:>=2.7.0, !=3.0.*, !=3.1.*, !=3.2.*, <4)
2024-03-01T05:51:54,607   Skipping link: No binaries permitted for funannotate: https://www.piwheels.org/simple/funannotate/funannotate-1.8.3-py2.py3-none-any.whl#sha256=587d4e06ffafcad8cd3bb8978bdc329ae44ac7cbf5eaaa47fb3454364446e095 (from https://www.piwheels.org/simple/funannotate/) (requires-python:>=2.7.0, !=3.0.*, !=3.1.*, !=3.2.*, <4)
2024-03-01T05:51:54,607   Skipping link: No binaries permitted for funannotate: https://www.piwheels.org/simple/funannotate/funannotate-1.8.1-py2.py3-none-any.whl#sha256=442d13e5c3b2c41a1dcee046a2b84cdfe1f6e511b9f0ffeb50fdcc0e7323bbaa (from https://www.piwheels.org/simple/funannotate/) (requires-python:>=2.7.0, !=3.0.*, !=3.1.*, !=3.2.*, <4)
2024-03-01T05:51:54,608 Skipping link: not a file: https://www.piwheels.org/simple/funannotate/
2024-03-01T05:51:54,608 Skipping link: not a file: https://pypi.org/simple/funannotate/
2024-03-01T05:51:54,645 Given no hashes to check 1 links for project 'funannotate': discarding no candidates
2024-03-01T05:51:54,677 Collecting funannotate==1.8.17
2024-03-01T05:51:54,682   Created temporary directory: /tmp/pip-unpack-836h5dj0
2024-03-01T05:51:54,892   Downloading funannotate-1.8.17.tar.gz (515 kB)
2024-03-01T05:51:55,808   Added funannotate==1.8.17 from https://files.pythonhosted.org/packages/d3/74/32189028b9dc0e94d746c6a6de89e29dbb535a6ec76b08a204fed56fb65d/funannotate-1.8.17.tar.gz to build tracker '/tmp/pip-build-tracker-wyfxmqt7'
2024-03-01T05:51:55,811   Running setup.py (path:/tmp/pip-wheel-ig2k7_7v/funannotate_348ec1cf8ce047979887e66b225eb4ce/setup.py) egg_info for package funannotate
2024-03-01T05:51:55,817   Created temporary directory: /tmp/pip-pip-egg-info-6tqt6vm4
2024-03-01T05:51:55,818   Preparing metadata (setup.py): started
2024-03-01T05:51:55,820   Running command python setup.py egg_info
2024-03-01T05:51:58,817   running egg_info
2024-03-01T05:51:58,819   creating /tmp/pip-pip-egg-info-6tqt6vm4/funannotate.egg-info
2024-03-01T05:51:58,892   writing /tmp/pip-pip-egg-info-6tqt6vm4/funannotate.egg-info/PKG-INFO
2024-03-01T05:51:58,898   writing dependency_links to /tmp/pip-pip-egg-info-6tqt6vm4/funannotate.egg-info/dependency_links.txt
2024-03-01T05:51:58,902   writing entry points to /tmp/pip-pip-egg-info-6tqt6vm4/funannotate.egg-info/entry_points.txt
2024-03-01T05:51:58,906   writing requirements to /tmp/pip-pip-egg-info-6tqt6vm4/funannotate.egg-info/requires.txt
2024-03-01T05:51:58,909   writing top-level names to /tmp/pip-pip-egg-info-6tqt6vm4/funannotate.egg-info/top_level.txt
2024-03-01T05:51:58,913   writing manifest file '/tmp/pip-pip-egg-info-6tqt6vm4/funannotate.egg-info/SOURCES.txt'
2024-03-01T05:51:59,192   reading manifest file '/tmp/pip-pip-egg-info-6tqt6vm4/funannotate.egg-info/SOURCES.txt'
2024-03-01T05:51:59,196   reading manifest template 'MANIFEST.in'
2024-03-01T05:51:59,215   warning: no files found matching 'funannotate/html_template/*'
2024-03-01T05:51:59,222   warning: no files found matching 'scripts/*'
2024-03-01T05:51:59,224   adding license file 'LICENSE.md'
2024-03-01T05:51:59,238   writing manifest file '/tmp/pip-pip-egg-info-6tqt6vm4/funannotate.egg-info/SOURCES.txt'
2024-03-01T05:51:59,413   Preparing metadata (setup.py): finished with status 'done'
2024-03-01T05:51:59,428   Source in /tmp/pip-wheel-ig2k7_7v/funannotate_348ec1cf8ce047979887e66b225eb4ce has version 1.8.17, which satisfies requirement funannotate==1.8.17 from https://files.pythonhosted.org/packages/d3/74/32189028b9dc0e94d746c6a6de89e29dbb535a6ec76b08a204fed56fb65d/funannotate-1.8.17.tar.gz
2024-03-01T05:51:59,430   Removed funannotate==1.8.17 from https://files.pythonhosted.org/packages/d3/74/32189028b9dc0e94d746c6a6de89e29dbb535a6ec76b08a204fed56fb65d/funannotate-1.8.17.tar.gz from build tracker '/tmp/pip-build-tracker-wyfxmqt7'
2024-03-01T05:51:59,448 Created temporary directory: /tmp/pip-unpack-f09w3r91
2024-03-01T05:51:59,450 Created temporary directory: /tmp/pip-unpack-ticdzoua
2024-03-01T05:51:59,483 Building wheels for collected packages: funannotate
2024-03-01T05:51:59,493   Created temporary directory: /tmp/pip-wheel-ok03dwsp
2024-03-01T05:51:59,494   Building wheel for funannotate (setup.py): started
2024-03-01T05:51:59,496   Destination directory: /tmp/pip-wheel-ok03dwsp
2024-03-01T05:51:59,496   Running command python setup.py bdist_wheel
2024-03-01T05:52:02,175   running bdist_wheel
2024-03-01T05:52:02,531   running build
2024-03-01T05:52:02,532   running build_py
2024-03-01T05:52:02,832   creating build
2024-03-01T05:52:02,833   creating build/lib
2024-03-01T05:52:02,834   creating build/lib/funannotate
2024-03-01T05:52:02,837   copying funannotate/funannotate.py -> build/lib/funannotate
2024-03-01T05:52:02,844   copying funannotate/check.py -> build/lib/funannotate
2024-03-01T05:52:02,849   copying funannotate/iprscan.py -> build/lib/funannotate
2024-03-01T05:52:02,853   copying funannotate/fix.py -> build/lib/funannotate
2024-03-01T05:52:02,858   copying funannotate/resources.py -> build/lib/funannotate
2024-03-01T05:52:02,863   copying funannotate/__init__.py -> build/lib/funannotate
2024-03-01T05:52:02,867   copying funannotate/interlap.py -> build/lib/funannotate
2024-03-01T05:52:02,872   copying funannotate/compare.py -> build/lib/funannotate
2024-03-01T05:52:02,880   copying funannotate/__version__.py -> build/lib/funannotate
2024-03-01T05:52:02,884   copying funannotate/species.py -> build/lib/funannotate
2024-03-01T05:52:02,889   copying funannotate/mask.py -> build/lib/funannotate
2024-03-01T05:52:02,895   copying funannotate/remote.py -> build/lib/funannotate
2024-03-01T05:52:02,901   copying funannotate/stackedBarGraph.py -> build/lib/funannotate
2024-03-01T05:52:02,906   copying funannotate/database.py -> build/lib/funannotate
2024-03-01T05:52:02,911   copying funannotate/predict.py -> build/lib/funannotate
2024-03-01T05:52:02,924   copying funannotate/setupDB.py -> build/lib/funannotate
2024-03-01T05:52:02,931   copying funannotate/train.py -> build/lib/funannotate
2024-03-01T05:52:02,940   copying funannotate/outgroups.py -> build/lib/funannotate
2024-03-01T05:52:02,946   copying funannotate/update.py -> build/lib/funannotate
2024-03-01T05:52:02,962   copying funannotate/annotate.py -> build/lib/funannotate
2024-03-01T05:52:02,973   copying funannotate/library.py -> build/lib/funannotate
2024-03-01T05:52:03,007   copying funannotate/clean.py -> build/lib/funannotate
2024-03-01T05:52:03,013   copying funannotate/test.py -> build/lib/funannotate
2024-03-01T05:52:03,018   copying funannotate/sort.py -> build/lib/funannotate
2024-03-01T05:52:03,023   creating build/lib/funannotate/utilities
2024-03-01T05:52:03,025   copying funannotate/utilities/gff2tbl.py -> build/lib/funannotate/utilities
2024-03-01T05:52:03,031   copying funannotate/utilities/gbk2parts.py -> build/lib/funannotate/utilities
2024-03-01T05:52:03,034   copying funannotate/utilities/gff_reformat.py -> build/lib/funannotate/utilities
2024-03-01T05:52:03,038   copying funannotate/utilities/bam2gff3.py -> build/lib/funannotate/utilities
2024-03-01T05:52:03,042   copying funannotate/utilities/get_longest_isoform.py -> build/lib/funannotate/utilities
2024-03-01T05:52:03,046   copying funannotate/utilities/contrast.py -> build/lib/funannotate/utilities
2024-03-01T05:52:03,053   copying funannotate/utilities/stringtie2gff3.py -> build/lib/funannotate/utilities
2024-03-01T05:52:03,057   copying funannotate/utilities/__init__.py -> build/lib/funannotate/utilities
2024-03-01T05:52:03,060   copying funannotate/utilities/gff2prot.py -> build/lib/funannotate/utilities
2024-03-01T05:52:03,064   copying funannotate/utilities/tbl2gbk.py -> build/lib/funannotate/utilities
2024-03-01T05:52:03,069   copying funannotate/utilities/stats.py -> build/lib/funannotate/utilities
2024-03-01T05:52:03,072   copying funannotate/utilities/quarry2gff3.py -> build/lib/funannotate/utilities
2024-03-01T05:52:03,075   running egg_info
2024-03-01T05:52:03,146   writing funannotate.egg-info/PKG-INFO
2024-03-01T05:52:03,150   writing dependency_links to funannotate.egg-info/dependency_links.txt
2024-03-01T05:52:03,153   writing entry points to funannotate.egg-info/entry_points.txt
2024-03-01T05:52:03,156   writing requirements to funannotate.egg-info/requires.txt
2024-03-01T05:52:03,158   writing top-level names to funannotate.egg-info/top_level.txt
2024-03-01T05:52:03,240   reading manifest file 'funannotate.egg-info/SOURCES.txt'
2024-03-01T05:52:03,250   reading manifest template 'MANIFEST.in'
2024-03-01T05:52:03,261   warning: no files found matching 'funannotate/html_template/*'
2024-03-01T05:52:03,263   warning: no files found matching 'scripts/*'
2024-03-01T05:52:03,264   adding license file 'LICENSE.md'
2024-03-01T05:52:03,282   writing manifest file 'funannotate.egg-info/SOURCES.txt'
2024-03-01T05:52:03,290   /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'funannotate.aux_scripts' is absent from the `packages` configuration.
2024-03-01T05:52:03,291   !!

2024-03-01T05:52:03,291           ********************************************************************************
2024-03-01T05:52:03,292           ############################
2024-03-01T05:52:03,292           # Package would be ignored #
2024-03-01T05:52:03,292           ############################
2024-03-01T05:52:03,293           Python recognizes 'funannotate.aux_scripts' as an importable package[^1],
2024-03-01T05:52:03,293           but it is absent from setuptools' `packages` configuration.

2024-03-01T05:52:03,294           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-01T05:52:03,294           package, please make sure that 'funannotate.aux_scripts' is explicitly added
2024-03-01T05:52:03,294           to the `packages` configuration field.

2024-03-01T05:52:03,295           Alternatively, you can also rely on setuptools' discovery methods
2024-03-01T05:52:03,295           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-01T05:52:03,295           instead of `find_packages(...)`/`find:`).

2024-03-01T05:52:03,296           You can read more about "package discovery" on setuptools documentation page:

2024-03-01T05:52:03,297           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-01T05:52:03,297           If you don't want 'funannotate.aux_scripts' to be distributed and are
2024-03-01T05:52:03,297           already explicitly excluding 'funannotate.aux_scripts' via
2024-03-01T05:52:03,298           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-01T05:52:03,298           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-01T05:52:03,298           combination with a more fine grained `package-data` configuration.

2024-03-01T05:52:03,299           You can read more about "package data files" on setuptools documentation page:

2024-03-01T05:52:03,300           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-01T05:52:03,300           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-01T05:52:03,301                 even if it does not contain any `.py` files.
2024-03-01T05:52:03,301                 On the other hand, currently there is no concept of package data
2024-03-01T05:52:03,301                 directory, all directories are treated like packages.
2024-03-01T05:52:03,302           ********************************************************************************

2024-03-01T05:52:03,302   !!
2024-03-01T05:52:03,302     check.warn(importable)
2024-03-01T05:52:03,303   /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'funannotate.config' is absent from the `packages` configuration.
2024-03-01T05:52:03,303   !!

2024-03-01T05:52:03,304           ********************************************************************************
2024-03-01T05:52:03,304           ############################
2024-03-01T05:52:03,304           # Package would be ignored #
2024-03-01T05:52:03,305           ############################
2024-03-01T05:52:03,305           Python recognizes 'funannotate.config' as an importable package[^1],
2024-03-01T05:52:03,305           but it is absent from setuptools' `packages` configuration.

2024-03-01T05:52:03,306           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-01T05:52:03,306           package, please make sure that 'funannotate.config' is explicitly added
2024-03-01T05:52:03,306           to the `packages` configuration field.

2024-03-01T05:52:03,307           Alternatively, you can also rely on setuptools' discovery methods
2024-03-01T05:52:03,307           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-01T05:52:03,308           instead of `find_packages(...)`/`find:`).

2024-03-01T05:52:03,308           You can read more about "package discovery" on setuptools documentation page:

2024-03-01T05:52:03,309           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-01T05:52:03,309           If you don't want 'funannotate.config' to be distributed and are
2024-03-01T05:52:03,310           already explicitly excluding 'funannotate.config' via
2024-03-01T05:52:03,310           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-01T05:52:03,310           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-01T05:52:03,311           combination with a more fine grained `package-data` configuration.

2024-03-01T05:52:03,311           You can read more about "package data files" on setuptools documentation page:

2024-03-01T05:52:03,312           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-01T05:52:03,313           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-01T05:52:03,313                 even if it does not contain any `.py` files.
2024-03-01T05:52:03,314                 On the other hand, currently there is no concept of package data
2024-03-01T05:52:03,314                 directory, all directories are treated like packages.
2024-03-01T05:52:03,314           ********************************************************************************

2024-03-01T05:52:03,315   !!
2024-03-01T05:52:03,315     check.warn(importable)
2024-03-01T05:52:03,316   /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'funannotate.html_template.css' is absent from the `packages` configuration.
2024-03-01T05:52:03,316   !!

2024-03-01T05:52:03,317           ********************************************************************************
2024-03-01T05:52:03,317           ############################
2024-03-01T05:52:03,317           # Package would be ignored #
2024-03-01T05:52:03,318           ############################
2024-03-01T05:52:03,318           Python recognizes 'funannotate.html_template.css' as an importable package[^1],
2024-03-01T05:52:03,318           but it is absent from setuptools' `packages` configuration.

2024-03-01T05:52:03,319           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-01T05:52:03,319           package, please make sure that 'funannotate.html_template.css' is explicitly added
2024-03-01T05:52:03,320           to the `packages` configuration field.

2024-03-01T05:52:03,320           Alternatively, you can also rely on setuptools' discovery methods
2024-03-01T05:52:03,320           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-01T05:52:03,321           instead of `find_packages(...)`/`find:`).

2024-03-01T05:52:03,321           You can read more about "package discovery" on setuptools documentation page:

2024-03-01T05:52:03,322           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-01T05:52:03,323           If you don't want 'funannotate.html_template.css' to be distributed and are
2024-03-01T05:52:03,323           already explicitly excluding 'funannotate.html_template.css' via
2024-03-01T05:52:03,323           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-01T05:52:03,324           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-01T05:52:03,324           combination with a more fine grained `package-data` configuration.

2024-03-01T05:52:03,325           You can read more about "package data files" on setuptools documentation page:

2024-03-01T05:52:03,325           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-01T05:52:03,326           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-01T05:52:03,326                 even if it does not contain any `.py` files.
2024-03-01T05:52:03,327                 On the other hand, currently there is no concept of package data
2024-03-01T05:52:03,327                 directory, all directories are treated like packages.
2024-03-01T05:52:03,328           ********************************************************************************

2024-03-01T05:52:03,328   !!
2024-03-01T05:52:03,329     check.warn(importable)
2024-03-01T05:52:03,329   /usr/local/lib/python3.7/dist-packages/setuptools/command/build_py.py:201: _Warning: Package 'funannotate.html_template.js' is absent from the `packages` configuration.
2024-03-01T05:52:03,329   !!

2024-03-01T05:52:03,330           ********************************************************************************
2024-03-01T05:52:03,330           ############################
2024-03-01T05:52:03,331           # Package would be ignored #
2024-03-01T05:52:03,331           ############################
2024-03-01T05:52:03,332           Python recognizes 'funannotate.html_template.js' as an importable package[^1],
2024-03-01T05:52:03,333           but it is absent from setuptools' `packages` configuration.

2024-03-01T05:52:03,334           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-01T05:52:03,334           package, please make sure that 'funannotate.html_template.js' is explicitly added
2024-03-01T05:52:03,334           to the `packages` configuration field.

2024-03-01T05:52:03,335           Alternatively, you can also rely on setuptools' discovery methods
2024-03-01T05:52:03,335           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-01T05:52:03,336           instead of `find_packages(...)`/`find:`).

2024-03-01T05:52:03,336           You can read more about "package discovery" on setuptools documentation page:

2024-03-01T05:52:03,337           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-01T05:52:03,338           If you don't want 'funannotate.html_template.js' to be distributed and are
2024-03-01T05:52:03,338           already explicitly excluding 'funannotate.html_template.js' via
2024-03-01T05:52:03,338           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-01T05:52:03,339           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-01T05:52:03,339           combination with a more fine grained `package-data` configuration.

2024-03-01T05:52:03,340           You can read more about "package data files" on setuptools documentation page:

2024-03-01T05:52:03,340           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-01T05:52:03,341           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-01T05:52:03,342                 even if it does not contain any `.py` files.
2024-03-01T05:52:03,342                 On the other hand, currently there is no concept of package data
2024-03-01T05:52:03,342                 directory, all directories are treated like packages.
2024-03-01T05:52:03,342           ********************************************************************************

2024-03-01T05:52:03,343   !!
2024-03-01T05:52:03,343     check.warn(importable)
2024-03-01T05:52:03,344   copying funannotate/downloads.json -> build/lib/funannotate
2024-03-01T05:52:03,344   creating build/lib/funannotate/aux_scripts
2024-03-01T05:52:03,344   copying funannotate/aux_scripts/augustus_parallel.py -> build/lib/funannotate/aux_scripts
2024-03-01T05:52:03,345   copying funannotate/aux_scripts/enrichment_parallel.py -> build/lib/funannotate/aux_scripts
2024-03-01T05:52:03,345   copying funannotate/aux_scripts/fasta2agp.py -> build/lib/funannotate/aux_scripts
2024-03-01T05:52:03,346   copying funannotate/aux_scripts/filterGenemark.pl -> build/lib/funannotate/aux_scripts
2024-03-01T05:52:03,346   copying funannotate/aux_scripts/filterIntronsFindStrand.pl -> build/lib/funannotate/aux_scripts
2024-03-01T05:52:03,346   copying funannotate/aux_scripts/funannotate-BUSCO2-py2.py -> build/lib/funannotate/aux_scripts
2024-03-01T05:52:03,355   copying funannotate/aux_scripts/funannotate-BUSCO2.py -> build/lib/funannotate/aux_scripts
2024-03-01T05:52:03,369   copying funannotate/aux_scripts/funannotate-p2g.py -> build/lib/funannotate/aux_scripts
2024-03-01T05:52:03,376   copying funannotate/aux_scripts/funannotate-runEVM.py -> build/lib/funannotate/aux_scripts
2024-03-01T05:52:03,382   copying funannotate/aux_scripts/genemark_gtf2gff3.pl -> build/lib/funannotate/aux_scripts
2024-03-01T05:52:03,387   copying funannotate/aux_scripts/getEggNog.sh -> build/lib/funannotate/aux_scripts
2024-03-01T05:52:03,391   copying funannotate/aux_scripts/hmmer_parallel.py -> build/lib/funannotate/aux_scripts
2024-03-01T05:52:03,396   copying funannotate/aux_scripts/iprscan-local.py -> build/lib/funannotate/aux_scripts
2024-03-01T05:52:03,401   copying funannotate/aux_scripts/iprscan2annotations.py -> build/lib/funannotate/aux_scripts
2024-03-01T05:52:03,406   copying funannotate/aux_scripts/pal2nal.pl -> build/lib/funannotate/aux_scripts
2024-03-01T05:52:03,424   copying funannotate/aux_scripts/phobius-multiproc.py -> build/lib/funannotate/aux_scripts
2024-03-01T05:52:03,429   copying funannotate/aux_scripts/phobius-remote.pl -> build/lib/funannotate/aux_scripts
2024-03-01T05:52:03,435   copying funannotate/aux_scripts/runIPRscan.py -> build/lib/funannotate/aux_scripts
2024-03-01T05:52:03,440   copying funannotate/aux_scripts/sam2bam.sh -> build/lib/funannotate/aux_scripts
2024-03-01T05:52:03,444   copying funannotate/aux_scripts/tbl2asn_parallel.py -> build/lib/funannotate/aux_scripts
2024-03-01T05:52:03,449   copying funannotate/aux_scripts/trinity.py -> build/lib/funannotate/aux_scripts
2024-03-01T05:52:03,455   copying funannotate/aux_scripts/trnascan2gff3.pl -> build/lib/funannotate/aux_scripts
2024-03-01T05:52:03,459   copying funannotate/aux_scripts/xmlcombine.py -> build/lib/funannotate/aux_scripts
2024-03-01T05:52:03,464   creating build/lib/funannotate/config
2024-03-01T05:52:03,465   copying funannotate/config/EOG092C0B3U.prfl -> build/lib/funannotate/config
2024-03-01T05:52:03,478   copying funannotate/config/TruSeq3-PE.fa -> build/lib/funannotate/config
2024-03-01T05:52:03,482   copying funannotate/config/TruSeq3-SE.fa -> build/lib/funannotate/config
2024-03-01T05:52:03,486   copying funannotate/config/busco_test.fa -> build/lib/funannotate/config
2024-03-01T05:52:03,490   copying funannotate/config/codeml.config -> build/lib/funannotate/config
2024-03-01T05:52:03,494   copying funannotate/config/extrinsic.E.XNT.RM.cfg -> build/lib/funannotate/config
2024-03-01T05:52:03,498   copying funannotate/config/smcogs.txt -> build/lib/funannotate/config
2024-03-01T05:52:03,504   copying funannotate/config/test.sbt -> build/lib/funannotate/config
2024-03-01T05:52:03,508   copying funannotate/config/tf_interpro.txt -> build/lib/funannotate/config
2024-03-01T05:52:03,512   creating build/lib/funannotate/html_template
2024-03-01T05:52:03,513   creating build/lib/funannotate/html_template/css
2024-03-01T05:52:03,515   copying funannotate/html_template/css/bootstrap.min.css -> build/lib/funannotate/html_template/css
2024-03-01T05:52:03,528   copying funannotate/html_template/css/starter-template.css -> build/lib/funannotate/html_template/css
2024-03-01T05:52:03,532   creating build/lib/funannotate/html_template/js
2024-03-01T05:52:03,535   copying funannotate/html_template/js/bootstrap.min.js -> build/lib/funannotate/html_template/js
2024-03-01T05:52:03,542   copying funannotate/html_template/js/ie-emulation-modes-warning.js -> build/lib/funannotate/html_template/js
2024-03-01T05:52:03,547   copying funannotate/html_template/js/ie10-viewport-bug-workaround.js -> build/lib/funannotate/html_template/js
2024-03-01T05:52:03,552   copying funannotate/html_template/js/jquery.min.js -> build/lib/funannotate/html_template/js
2024-03-01T05:52:03,651   /usr/local/lib/python3.7/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2024-03-01T05:52:03,652   !!

2024-03-01T05:52:03,653           ********************************************************************************
2024-03-01T05:52:03,653           Please avoid running ``setup.py`` directly.
2024-03-01T05:52:03,653           Instead, use pypa/build, pypa/installer or other
2024-03-01T05:52:03,654           standards-based tools.

2024-03-01T05:52:03,655           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2024-03-01T05:52:03,655           ********************************************************************************

2024-03-01T05:52:03,656   !!
2024-03-01T05:52:03,656     self.initialize_options()
2024-03-01T05:52:03,721   installing to build/bdist.linux-armv7l/wheel
2024-03-01T05:52:03,722   running install
2024-03-01T05:52:03,780   running install_lib
2024-03-01T05:52:03,861   creating build/bdist.linux-armv7l
2024-03-01T05:52:03,862   creating build/bdist.linux-armv7l/wheel
2024-03-01T05:52:03,867   creating build/bdist.linux-armv7l/wheel/funannotate
2024-03-01T05:52:03,869   copying build/lib/funannotate/funannotate.py -> build/bdist.linux-armv7l/wheel/funannotate
2024-03-01T05:52:03,881   copying build/lib/funannotate/check.py -> build/bdist.linux-armv7l/wheel/funannotate
2024-03-01T05:52:03,886   copying build/lib/funannotate/iprscan.py -> build/bdist.linux-armv7l/wheel/funannotate
2024-03-01T05:52:03,890   copying build/lib/funannotate/fix.py -> build/bdist.linux-armv7l/wheel/funannotate
2024-03-01T05:52:03,895   copying build/lib/funannotate/resources.py -> build/bdist.linux-armv7l/wheel/funannotate
2024-03-01T05:52:03,900   copying build/lib/funannotate/__init__.py -> build/bdist.linux-armv7l/wheel/funannotate
2024-03-01T05:52:03,904   copying build/lib/funannotate/interlap.py -> build/bdist.linux-armv7l/wheel/funannotate
2024-03-01T05:52:03,910   copying build/lib/funannotate/compare.py -> build/bdist.linux-armv7l/wheel/funannotate
2024-03-01T05:52:04,133   creating build/bdist.linux-armv7l/wheel/funannotate/aux_scripts
2024-03-01T05:52:04,135   copying build/lib/funannotate/aux_scripts/funannotate-runEVM.py -> build/bdist.linux-armv7l/wheel/funannotate/aux_scripts
2024-03-01T05:52:04,141   copying build/lib/funannotate/aux_scripts/funannotate-BUSCO2.py -> build/bdist.linux-armv7l/wheel/funannotate/aux_scripts
2024-03-01T05:52:04,153   copying build/lib/funannotate/aux_scripts/phobius-multiproc.py -> build/bdist.linux-armv7l/wheel/funannotate/aux_scripts
2024-03-01T05:52:04,157   copying build/lib/funannotate/aux_scripts/genemark_gtf2gff3.pl -> build/bdist.linux-armv7l/wheel/funannotate/aux_scripts
2024-03-01T05:52:04,161   copying build/lib/funannotate/aux_scripts/runIPRscan.py -> build/bdist.linux-armv7l/wheel/funannotate/aux_scripts
2024-03-01T05:52:04,166   copying build/lib/funannotate/aux_scripts/enrichment_parallel.py -> build/bdist.linux-armv7l/wheel/funannotate/aux_scripts
2024-03-01T05:52:04,169   copying build/lib/funannotate/aux_scripts/getEggNog.sh -> build/bdist.linux-armv7l/wheel/funannotate/aux_scripts
2024-03-01T05:52:04,173   copying build/lib/funannotate/aux_scripts/fasta2agp.py -> build/bdist.linux-armv7l/wheel/funannotate/aux_scripts
2024-03-01T05:52:04,180   copying build/lib/funannotate/aux_scripts/iprscan2annotations.py -> build/bdist.linux-armv7l/wheel/funannotate/aux_scripts
2024-03-01T05:52:04,185   copying build/lib/funannotate/aux_scripts/funannotate-BUSCO2-py2.py -> build/bdist.linux-armv7l/wheel/funannotate/aux_scripts
2024-03-01T05:52:04,196   copying build/lib/funannotate/aux_scripts/tbl2asn_parallel.py -> build/bdist.linux-armv7l/wheel/funannotate/aux_scripts
2024-03-01T05:52:04,201   copying build/lib/funannotate/aux_scripts/filterIntronsFindStrand.pl -> build/bdist.linux-armv7l/wheel/funannotate/aux_scripts
2024-03-01T05:52:04,205   copying build/lib/funannotate/aux_scripts/augustus_parallel.py -> build/bdist.linux-armv7l/wheel/funannotate/aux_scripts
2024-03-01T05:52:04,209   copying build/lib/funannotate/aux_scripts/iprscan-local.py -> build/bdist.linux-armv7l/wheel/funannotate/aux_scripts
2024-03-01T05:52:04,214   copying build/lib/funannotate/aux_scripts/sam2bam.sh -> build/bdist.linux-armv7l/wheel/funannotate/aux_scripts
2024-03-01T05:52:04,218   copying build/lib/funannotate/aux_scripts/filterGenemark.pl -> build/bdist.linux-armv7l/wheel/funannotate/aux_scripts
2024-03-01T05:52:04,223   copying build/lib/funannotate/aux_scripts/phobius-remote.pl -> build/bdist.linux-armv7l/wheel/funannotate/aux_scripts
2024-03-01T05:52:04,230   copying build/lib/funannotate/aux_scripts/hmmer_parallel.py -> build/bdist.linux-armv7l/wheel/funannotate/aux_scripts
2024-03-01T05:52:04,235   copying build/lib/funannotate/aux_scripts/pal2nal.pl -> build/bdist.linux-armv7l/wheel/funannotate/aux_scripts
2024-03-01T05:52:04,242   copying build/lib/funannotate/aux_scripts/trinity.py -> build/bdist.linux-armv7l/wheel/funannotate/aux_scripts
2024-03-01T05:52:04,247   copying build/lib/funannotate/aux_scripts/xmlcombine.py -> build/bdist.linux-armv7l/wheel/funannotate/aux_scripts
2024-03-01T05:52:04,252   copying build/lib/funannotate/aux_scripts/trnascan2gff3.pl -> build/bdist.linux-armv7l/wheel/funannotate/aux_scripts
2024-03-01T05:52:04,257   copying build/lib/funannotate/aux_scripts/funannotate-p2g.py -> build/bdist.linux-armv7l/wheel/funannotate/aux_scripts
2024-03-01T05:52:04,262   copying build/lib/funannotate/__version__.py -> build/bdist.linux-armv7l/wheel/funannotate
2024-03-01T05:52:04,267   copying build/lib/funannotate/species.py -> build/bdist.linux-armv7l/wheel/funannotate
2024-03-01T05:52:04,271   copying build/lib/funannotate/mask.py -> build/bdist.linux-armv7l/wheel/funannotate
2024-03-01T05:52:04,276   copying build/lib/funannotate/remote.py -> build/bdist.linux-armv7l/wheel/funannotate
2024-03-01T05:52:04,282   copying build/lib/funannotate/stackedBarGraph.py -> build/bdist.linux-armv7l/wheel/funannotate
2024-03-01T05:52:04,287   copying build/lib/funannotate/database.py -> build/bdist.linux-armv7l/wheel/funannotate
2024-03-01T05:52:04,292   copying build/lib/funannotate/predict.py -> build/bdist.linux-armv7l/wheel/funannotate
2024-03-01T05:52:04,304   copying build/lib/funannotate/setupDB.py -> build/bdist.linux-armv7l/wheel/funannotate
2024-03-01T05:52:04,312   creating build/bdist.linux-armv7l/wheel/funannotate/html_template
2024-03-01T05:52:04,315   creating build/bdist.linux-armv7l/wheel/funannotate/html_template/css
2024-03-01T05:52:04,318   copying build/lib/funannotate/html_template/css/starter-template.css -> build/bdist.linux-armv7l/wheel/funannotate/html_template/css
2024-03-01T05:52:04,322   copying build/lib/funannotate/html_template/css/bootstrap.min.css -> build/bdist.linux-armv7l/wheel/funannotate/html_template/css
2024-03-01T05:52:04,335   creating build/bdist.linux-armv7l/wheel/funannotate/html_template/js
2024-03-01T05:52:04,337   copying build/lib/funannotate/html_template/js/jquery.min.js -> build/bdist.linux-armv7l/wheel/funannotate/html_template/js
2024-03-01T05:52:04,348   copying build/lib/funannotate/html_template/js/bootstrap.min.js -> build/bdist.linux-armv7l/wheel/funannotate/html_template/js
2024-03-01T05:52:04,354   copying build/lib/funannotate/html_template/js/ie10-viewport-bug-workaround.js -> build/bdist.linux-armv7l/wheel/funannotate/html_template/js
2024-03-01T05:52:04,359   copying build/lib/funannotate/html_template/js/ie-emulation-modes-warning.js -> build/bdist.linux-armv7l/wheel/funannotate/html_template/js
2024-03-01T05:52:04,363   copying build/lib/funannotate/train.py -> build/bdist.linux-armv7l/wheel/funannotate
2024-03-01T05:52:04,371   copying build/lib/funannotate/outgroups.py -> build/bdist.linux-armv7l/wheel/funannotate
2024-03-01T05:52:04,377   creating build/bdist.linux-armv7l/wheel/funannotate/config
2024-03-01T05:52:04,379   copying build/lib/funannotate/config/extrinsic.E.XNT.RM.cfg -> build/bdist.linux-armv7l/wheel/funannotate/config
2024-03-01T05:52:04,383   copying build/lib/funannotate/config/TruSeq3-PE.fa -> build/bdist.linux-armv7l/wheel/funannotate/config
2024-03-01T05:52:04,386   copying build/lib/funannotate/config/codeml.config -> build/bdist.linux-armv7l/wheel/funannotate/config
2024-03-01T05:52:04,389   copying build/lib/funannotate/config/busco_test.fa -> build/bdist.linux-armv7l/wheel/funannotate/config
2024-03-01T05:52:04,393   copying build/lib/funannotate/config/tf_interpro.txt -> build/bdist.linux-armv7l/wheel/funannotate/config
2024-03-01T05:52:04,397   copying build/lib/funannotate/config/EOG092C0B3U.prfl -> build/bdist.linux-armv7l/wheel/funannotate/config
2024-03-01T05:52:04,409   copying build/lib/funannotate/config/TruSeq3-SE.fa -> build/bdist.linux-armv7l/wheel/funannotate/config
2024-03-01T05:52:04,412   copying build/lib/funannotate/config/test.sbt -> build/bdist.linux-armv7l/wheel/funannotate/config
2024-03-01T05:52:04,416   copying build/lib/funannotate/config/smcogs.txt -> build/bdist.linux-armv7l/wheel/funannotate/config
2024-03-01T05:52:04,421   copying build/lib/funannotate/update.py -> build/bdist.linux-armv7l/wheel/funannotate
2024-03-01T05:52:04,433   copying build/lib/funannotate/annotate.py -> build/bdist.linux-armv7l/wheel/funannotate
2024-03-01T05:52:04,443   copying build/lib/funannotate/library.py -> build/bdist.linux-armv7l/wheel/funannotate
2024-03-01T05:52:04,471   copying build/lib/funannotate/downloads.json -> build/bdist.linux-armv7l/wheel/funannotate
2024-03-01T05:52:04,475   copying build/lib/funannotate/clean.py -> build/bdist.linux-armv7l/wheel/funannotate
2024-03-01T05:52:04,480   copying build/lib/funannotate/test.py -> build/bdist.linux-armv7l/wheel/funannotate
2024-03-01T05:52:04,486   creating build/bdist.linux-armv7l/wheel/funannotate/utilities
2024-03-01T05:52:04,488   copying build/lib/funannotate/utilities/gff2tbl.py -> build/bdist.linux-armv7l/wheel/funannotate/utilities
2024-03-01T05:52:04,493   copying build/lib/funannotate/utilities/gbk2parts.py -> build/bdist.linux-armv7l/wheel/funannotate/utilities
2024-03-01T05:52:04,497   copying build/lib/funannotate/utilities/gff_reformat.py -> build/bdist.linux-armv7l/wheel/funannotate/utilities
2024-03-01T05:52:04,501   copying build/lib/funannotate/utilities/bam2gff3.py -> build/bdist.linux-armv7l/wheel/funannotate/utilities
2024-03-01T05:52:04,504   copying build/lib/funannotate/utilities/get_longest_isoform.py -> build/bdist.linux-armv7l/wheel/funannotate/utilities
2024-03-01T05:52:04,508   copying build/lib/funannotate/utilities/contrast.py -> build/bdist.linux-armv7l/wheel/funannotate/utilities
2024-03-01T05:52:04,515   copying build/lib/funannotate/utilities/stringtie2gff3.py -> build/bdist.linux-armv7l/wheel/funannotate/utilities
2024-03-01T05:52:04,519   copying build/lib/funannotate/utilities/__init__.py -> build/bdist.linux-armv7l/wheel/funannotate/utilities
2024-03-01T05:52:04,521   copying build/lib/funannotate/utilities/gff2prot.py -> build/bdist.linux-armv7l/wheel/funannotate/utilities
2024-03-01T05:52:04,525   copying build/lib/funannotate/utilities/tbl2gbk.py -> build/bdist.linux-armv7l/wheel/funannotate/utilities
2024-03-01T05:52:04,529   copying build/lib/funannotate/utilities/stats.py -> build/bdist.linux-armv7l/wheel/funannotate/utilities
2024-03-01T05:52:04,533   copying build/lib/funannotate/utilities/quarry2gff3.py -> build/bdist.linux-armv7l/wheel/funannotate/utilities
2024-03-01T05:52:04,539   copying build/lib/funannotate/sort.py -> build/bdist.linux-armv7l/wheel/funannotate
2024-03-01T05:52:04,543   running install_egg_info
2024-03-01T05:52:04,625   Copying funannotate.egg-info to build/bdist.linux-armv7l/wheel/funannotate-1.8.17-py3.7.egg-info
2024-03-01T05:52:04,648   running install_scripts
2024-03-01T05:52:04,688   creating build/bdist.linux-armv7l/wheel/funannotate-1.8.17.dist-info/WHEEL
2024-03-01T05:52:04,694   creating '/tmp/pip-wheel-ok03dwsp/funannotate-1.8.17-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-03-01T05:52:04,700   adding 'funannotate/__init__.py'
2024-03-01T05:52:04,702   adding 'funannotate/__version__.py'
2024-03-01T05:52:04,727   adding 'funannotate/annotate.py'
2024-03-01T05:52:04,734   adding 'funannotate/check.py'
2024-03-01T05:52:04,738   adding 'funannotate/clean.py'
2024-03-01T05:52:04,755   adding 'funannotate/compare.py'
2024-03-01T05:52:04,759   adding 'funannotate/database.py'
2024-03-01T05:52:04,762   adding 'funannotate/downloads.json'
2024-03-01T05:52:04,765   adding 'funannotate/fix.py'
2024-03-01T05:52:04,775   adding 'funannotate/funannotate.py'
2024-03-01T05:52:04,779   adding 'funannotate/interlap.py'
2024-03-01T05:52:04,782   adding 'funannotate/iprscan.py'
2024-03-01T05:52:04,883   adding 'funannotate/library.py'
2024-03-01T05:52:04,896   adding 'funannotate/mask.py'
2024-03-01T05:52:04,899   adding 'funannotate/outgroups.py'
2024-03-01T05:52:04,928   adding 'funannotate/predict.py'
2024-03-01T05:52:04,936   adding 'funannotate/remote.py'
2024-03-01T05:52:04,940   adding 'funannotate/resources.py'
2024-03-01T05:52:04,949   adding 'funannotate/setupDB.py'
2024-03-01T05:52:04,953   adding 'funannotate/sort.py'
2024-03-01T05:52:04,956   adding 'funannotate/species.py'
2024-03-01T05:52:04,960   adding 'funannotate/stackedBarGraph.py'
2024-03-01T05:52:04,965   adding 'funannotate/test.py'
2024-03-01T05:52:04,982   adding 'funannotate/train.py'
2024-03-01T05:52:05,018   adding 'funannotate/update.py'
2024-03-01T05:52:05,027   adding 'funannotate/aux_scripts/augustus_parallel.py'
2024-03-01T05:52:05,030   adding 'funannotate/aux_scripts/enrichment_parallel.py'
2024-03-01T05:52:05,033   adding 'funannotate/aux_scripts/fasta2agp.py'
2024-03-01T05:52:05,040   adding 'funannotate/aux_scripts/filterGenemark.pl'
2024-03-01T05:52:05,043   adding 'funannotate/aux_scripts/filterIntronsFindStrand.pl'
2024-03-01T05:52:05,078   adding 'funannotate/aux_scripts/funannotate-BUSCO2-py2.py'
2024-03-01T05:52:05,117   adding 'funannotate/aux_scripts/funannotate-BUSCO2.py'
2024-03-01T05:52:05,125   adding 'funannotate/aux_scripts/funannotate-p2g.py'
2024-03-01T05:52:05,132   adding 'funannotate/aux_scripts/funannotate-runEVM.py'
2024-03-01T05:52:05,136   adding 'funannotate/aux_scripts/genemark_gtf2gff3.pl'
2024-03-01T05:52:05,139   adding 'funannotate/aux_scripts/getEggNog.sh'
2024-03-01T05:52:05,142   adding 'funannotate/aux_scripts/hmmer_parallel.py'
2024-03-01T05:52:05,147   adding 'funannotate/aux_scripts/iprscan-local.py'
2024-03-01T05:52:05,151   adding 'funannotate/aux_scripts/iprscan2annotations.py'
2024-03-01T05:52:05,164   adding 'funannotate/aux_scripts/pal2nal.pl'
2024-03-01T05:52:05,168   adding 'funannotate/aux_scripts/phobius-multiproc.py'
2024-03-01T05:52:05,178   adding 'funannotate/aux_scripts/phobius-remote.pl'
2024-03-01T05:52:05,184   adding 'funannotate/aux_scripts/runIPRscan.py'
2024-03-01T05:52:05,187   adding 'funannotate/aux_scripts/sam2bam.sh'
2024-03-01T05:52:05,191   adding 'funannotate/aux_scripts/tbl2asn_parallel.py'
2024-03-01T05:52:05,195   adding 'funannotate/aux_scripts/trinity.py'
2024-03-01T05:52:05,198   adding 'funannotate/aux_scripts/trnascan2gff3.pl'
2024-03-01T05:52:05,201   adding 'funannotate/aux_scripts/xmlcombine.py'
2024-03-01T05:52:05,264   adding 'funannotate/config/EOG092C0B3U.prfl'
2024-03-01T05:52:05,269   adding 'funannotate/config/TruSeq3-PE.fa'
2024-03-01T05:52:05,271   adding 'funannotate/config/TruSeq3-SE.fa'
2024-03-01T05:52:05,275   adding 'funannotate/config/busco_test.fa'
2024-03-01T05:52:05,278   adding 'funannotate/config/codeml.config'
2024-03-01T05:52:05,280   adding 'funannotate/config/extrinsic.E.XNT.RM.cfg'
2024-03-01T05:52:05,285   adding 'funannotate/config/smcogs.txt'
2024-03-01T05:52:05,288   adding 'funannotate/config/test.sbt'
2024-03-01T05:52:05,290   adding 'funannotate/config/tf_interpro.txt'
2024-03-01T05:52:05,316   adding 'funannotate/html_template/css/bootstrap.min.css'
2024-03-01T05:52:05,321   adding 'funannotate/html_template/css/starter-template.css'
2024-03-01T05:52:05,332   adding 'funannotate/html_template/js/bootstrap.min.js'
2024-03-01T05:52:05,336   adding 'funannotate/html_template/js/ie-emulation-modes-warning.js'
2024-03-01T05:52:05,338   adding 'funannotate/html_template/js/ie10-viewport-bug-workaround.js'
2024-03-01T05:52:05,371   adding 'funannotate/html_template/js/jquery.min.js'
2024-03-01T05:52:05,376   adding 'funannotate/utilities/__init__.py'
2024-03-01T05:52:05,379   adding 'funannotate/utilities/bam2gff3.py'
2024-03-01T05:52:05,395   adding 'funannotate/utilities/contrast.py'
2024-03-01T05:52:05,398   adding 'funannotate/utilities/gbk2parts.py'
2024-03-01T05:52:05,401   adding 'funannotate/utilities/get_longest_isoform.py'
2024-03-01T05:52:05,404   adding 'funannotate/utilities/gff2prot.py'
2024-03-01T05:52:05,409   adding 'funannotate/utilities/gff2tbl.py'
2024-03-01T05:52:05,412   adding 'funannotate/utilities/gff_reformat.py'
2024-03-01T05:52:05,415   adding 'funannotate/utilities/quarry2gff3.py'
2024-03-01T05:52:05,418   adding 'funannotate/utilities/stats.py'
2024-03-01T05:52:05,421   adding 'funannotate/utilities/stringtie2gff3.py'
2024-03-01T05:52:05,425   adding 'funannotate/utilities/tbl2gbk.py'
2024-03-01T05:52:05,430   adding 'funannotate-1.8.17.dist-info/LICENSE.md'
2024-03-01T05:52:05,433   adding 'funannotate-1.8.17.dist-info/METADATA'
2024-03-01T05:52:05,436   adding 'funannotate-1.8.17.dist-info/WHEEL'
2024-03-01T05:52:05,438   adding 'funannotate-1.8.17.dist-info/entry_points.txt'
2024-03-01T05:52:05,439   adding 'funannotate-1.8.17.dist-info/top_level.txt'
2024-03-01T05:52:05,443   adding 'funannotate-1.8.17.dist-info/RECORD'
2024-03-01T05:52:05,468   removing build/bdist.linux-armv7l/wheel
2024-03-01T05:52:05,690   Building wheel for funannotate (setup.py): finished with status 'done'
2024-03-01T05:52:05,713   Created wheel for funannotate: filename=funannotate-1.8.17-py3-none-any.whl size=508353 sha256=503dca51096182bfa96ab6bb90be58961f420bf68d40143b27eff583f12979e3
2024-03-01T05:52:05,715   Stored in directory: /tmp/pip-ephem-wheel-cache-p1gwlbqb/wheels/58/e5/f6/f3fda79d640591a9bdf63116f9c7f6f30ee64d68a5b168321b
2024-03-01T05:52:05,751 Successfully built funannotate
2024-03-01T05:52:05,801 Removed build tracker: '/tmp/pip-build-tracker-wyfxmqt7'