2024-03-06T00:22:23,979 Created temporary directory: /tmp/pip-build-tracker-zj4l0vko 2024-03-06T00:22:23,981 Initialized build tracking at /tmp/pip-build-tracker-zj4l0vko 2024-03-06T00:22:23,982 Created build tracker: /tmp/pip-build-tracker-zj4l0vko 2024-03-06T00:22:23,982 Entered build tracker: /tmp/pip-build-tracker-zj4l0vko 2024-03-06T00:22:23,983 Created temporary directory: /tmp/pip-wheel-ebav9ds_ 2024-03-06T00:22:23,986 Created temporary directory: /tmp/pip-ephem-wheel-cache-xqhhnaf_ 2024-03-06T00:22:24,015 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-03-06T00:22:24,018 2 location(s) to search for versions of instanovo: 2024-03-06T00:22:24,018 * https://pypi.org/simple/instanovo/ 2024-03-06T00:22:24,018 * https://www.piwheels.org/simple/instanovo/ 2024-03-06T00:22:24,019 Fetching project page and analyzing links: https://pypi.org/simple/instanovo/ 2024-03-06T00:22:24,020 Getting page https://pypi.org/simple/instanovo/ 2024-03-06T00:22:24,021 Found index url https://pypi.org/simple/ 2024-03-06T00:22:24,236 Fetched page https://pypi.org/simple/instanovo/ as application/vnd.pypi.simple.v1+json 2024-03-06T00:22:24,240 Skipping link: No binaries permitted for instanovo: https://files.pythonhosted.org/packages/ef/c2/3d05dbba977c55aa432994de6481768faa485a8fbd641f3b5eeb45279846/instanovo-0.1.2-py3-none-any.whl (from https://pypi.org/simple/instanovo/) 2024-03-06T00:22:24,241 Found link https://files.pythonhosted.org/packages/4b/9d/1569c7da11d02ac10023156020e9ce8626fa1b570abb2af6058050fa0252/instanovo-0.1.2.tar.gz (from https://pypi.org/simple/instanovo/), version: 0.1.2 2024-03-06T00:22:24,242 Skipping link: No binaries permitted for instanovo: https://files.pythonhosted.org/packages/fe/54/2f3137bc8dfeb7393c9858ad72f1fc8fbad473cd7d2f832e91e38583363f/instanovo-0.1.3-py3-none-any.whl (from https://pypi.org/simple/instanovo/) 2024-03-06T00:22:24,243 Found link https://files.pythonhosted.org/packages/a5/2c/455872e598ce0ee284f9db076ad971af0f1375b6e5e50a8624feef542b8f/instanovo-0.1.3.tar.gz (from https://pypi.org/simple/instanovo/), version: 0.1.3 2024-03-06T00:22:24,244 Skipping link: No binaries permitted for instanovo: https://files.pythonhosted.org/packages/d2/78/cf474be5524f697e1b31f449c620811fc0c0c620c9a68ad51ff3e604bc43/instanovo-0.1.4-py3-none-any.whl (from https://pypi.org/simple/instanovo/) 2024-03-06T00:22:24,245 Found link https://files.pythonhosted.org/packages/17/6a/418ca0d811b39b7042b09ea9544bd3fb8e636c01b5a912b1780efa015a3c/instanovo-0.1.4.tar.gz (from https://pypi.org/simple/instanovo/), version: 0.1.4 2024-03-06T00:22:24,245 Skipping link: No binaries permitted for instanovo: https://files.pythonhosted.org/packages/08/6d/e01335d5d8e056a1695803f975346be9fb1dbdfaa5dbe35f845814244d36/instanovo-0.1.5-py3-none-any.whl (from https://pypi.org/simple/instanovo/) 2024-03-06T00:22:24,246 Found link https://files.pythonhosted.org/packages/06/1f/ea1a77eacab9a296d3c0b03e80581152e59c2564fbaa069706e792855f53/instanovo-0.1.5.tar.gz (from https://pypi.org/simple/instanovo/), version: 0.1.5 2024-03-06T00:22:24,247 Skipping link: No binaries permitted for instanovo: https://files.pythonhosted.org/packages/c5/b2/e9d0a472ceb47de6b5b167b9096a1205c5a2782cce5038b714ab31244759/instanovo-0.1.6-py3-none-any.whl (from https://pypi.org/simple/instanovo/) 2024-03-06T00:22:24,248 Found link https://files.pythonhosted.org/packages/b2/3a/90a53bcf12a4a56441f6460a96c757c558489824ee10e1f221ee6a12ecf1/instanovo-0.1.6.tar.gz (from https://pypi.org/simple/instanovo/), version: 0.1.6 2024-03-06T00:22:24,249 Skipping link: No binaries permitted for instanovo: https://files.pythonhosted.org/packages/ee/5b/6342af473e15358a3bb450b4dbdfdea1b6dc97fd907bb392f7ec29c10316/instanovo-0.1.7-py3-none-any.whl (from https://pypi.org/simple/instanovo/) 2024-03-06T00:22:24,250 Found link https://files.pythonhosted.org/packages/43/44/0ff9298f682a9b3f261aa8158fa59b77f7829a711fb8dd2e8139c7f2c371/instanovo-0.1.7.tar.gz (from https://pypi.org/simple/instanovo/), version: 0.1.7 2024-03-06T00:22:24,251 Fetching project page and analyzing links: https://www.piwheels.org/simple/instanovo/ 2024-03-06T00:22:24,252 Getting page https://www.piwheels.org/simple/instanovo/ 2024-03-06T00:22:24,253 Found index url https://www.piwheels.org/simple/ 2024-03-06T00:22:24,606 Fetched page https://www.piwheels.org/simple/instanovo/ as text/html 2024-03-06T00:22:24,609 Skipping link: No binaries permitted for instanovo: https://www.piwheels.org/simple/instanovo/instanovo-0.1.6-py3-none-any.whl#sha256=29e8db8a4cf000389dc1a1a8994297b42277391391c86dbb6d06ab06156bcd2e (from https://www.piwheels.org/simple/instanovo/) 2024-03-06T00:22:24,609 Skipping link: No binaries permitted for instanovo: https://www.piwheels.org/simple/instanovo/instanovo-0.1.5-py3-none-any.whl#sha256=16610bf84cf1fbb521189f55a2dc536cfabf5144955dd7a4975b63aea3f9d6b8 (from https://www.piwheels.org/simple/instanovo/) 2024-03-06T00:22:24,610 Skipping link: No binaries permitted for instanovo: https://www.piwheels.org/simple/instanovo/instanovo-0.1.4-py3-none-any.whl#sha256=2fee2a986c3e3e30dbdd55f7b3498fd2c92a1fe98a34c19b6f1b0f6a18ba33a2 (from https://www.piwheels.org/simple/instanovo/) 2024-03-06T00:22:24,610 Skipping link: No binaries permitted for instanovo: https://www.piwheels.org/simple/instanovo/instanovo-0.1.3-py3-none-any.whl#sha256=f488c52ade86f73d2ad52e629083c891f0017bc68c20a213a5b3bc2cae1da553 (from https://www.piwheels.org/simple/instanovo/) 2024-03-06T00:22:24,611 Skipping link: No binaries permitted for instanovo: https://www.piwheels.org/simple/instanovo/instanovo-0.1.2-py3-none-any.whl#sha256=0ef17ebb41c8858941ca91fb8a543c0adca2a0dccc55af4ba471bb69d50149bc (from https://www.piwheels.org/simple/instanovo/) 2024-03-06T00:22:24,612 Skipping link: not a file: https://www.piwheels.org/simple/instanovo/ 2024-03-06T00:22:24,612 Skipping link: not a file: https://pypi.org/simple/instanovo/ 2024-03-06T00:22:24,631 Given no hashes to check 1 links for project 'instanovo': discarding no candidates 2024-03-06T00:22:24,649 Collecting instanovo==0.1.7 2024-03-06T00:22:24,651 Created temporary directory: /tmp/pip-unpack-516m5jxv 2024-03-06T00:22:24,881 Downloading instanovo-0.1.7.tar.gz (53 kB) 2024-03-06T00:22:25,009 Added instanovo==0.1.7 from https://files.pythonhosted.org/packages/43/44/0ff9298f682a9b3f261aa8158fa59b77f7829a711fb8dd2e8139c7f2c371/instanovo-0.1.7.tar.gz to build tracker '/tmp/pip-build-tracker-zj4l0vko' 2024-03-06T00:22:25,014 Running setup.py (path:/tmp/pip-wheel-ebav9ds_/instanovo_54675825a97d4e77bffce67a23b5fb87/setup.py) egg_info for package instanovo 2024-03-06T00:22:25,015 Created temporary directory: /tmp/pip-pip-egg-info-pf4pikhh 2024-03-06T00:22:25,016 Preparing metadata (setup.py): started 2024-03-06T00:22:25,017 Running command python setup.py egg_info 2024-03-06T00:22:25,812 /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:80: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2024-03-06T00:22:25,812 !! 2024-03-06T00:22:25,813 ******************************************************************************** 2024-03-06T00:22:25,814 Requirements should be satisfied by a PEP 517 installer. 2024-03-06T00:22:25,814 If you are using pip, you can try `pip install --use-pep517`. 2024-03-06T00:22:25,815 ******************************************************************************** 2024-03-06T00:22:25,816 !! 2024-03-06T00:22:25,817 dist.fetch_build_eggs(dist.setup_requires) 2024-03-06T00:22:33,224 Requirements parsed from 'requirements.txt': 'aiobotocore==2.4.1', 'boto3==1.24.59', 'botocore==1.27.59', 'click==8.1.7', 'cloudpathlib==0.10.0', 'datasets==2.14.5', 'depthcharge-ms==0.1.0', 'fastprogress==1.0.3', 'jiwer==3.0.3', 'matchms==0.22.0', 'matplotlib==3.7.2', 'numba==0.57.1', 'numpy==1.23.3', 'omegaconf==2.2.3', 'pandas==2.0.3', 'polars==0.19.7', 'protobuf==3.19.6', 'pyarrow==15.0.0', 'pyopenms==2.7.0; python_version < '3.10'', 'pyopenms==3.1.0; python_version >= '3.10'', 'python-dotenv==0.21.0', 'pytorch_lightning==1.8.6', 'scikit-learn==1.1.2; python_version < '3.11'', 'scikit-learn==1.4.1.post1; python_version >= '3.11'', 'seaborn==0.12.0', 'spectrum_utils==0.4.1', 'tensorboard==2.10.1', 'tensorboardX==2.5.1', 'torch==2.2.1', 'tqdm==4.65.0', 'transfusion-asr==0.1.0' 2024-03-06T00:22:33,226 Requirements parsed from 'requirements.txt': 'aiobotocore==2.4.1', 'boto3==1.24.59', 'botocore==1.27.59', 'click==8.1.7', 'cloudpathlib==0.10.0', 'datasets==2.14.5', 'depthcharge-ms==0.1.0', 'fastprogress==1.0.3', 'jiwer==3.0.3', 'matchms==0.22.0', 'matplotlib==3.7.2', 'numba==0.57.1', 'numpy==1.23.3', 'omegaconf==2.2.3', 'pandas==2.0.3', 'polars==0.19.7', 'protobuf==3.19.6', 'pyarrow==15.0.0', 'pyopenms==2.7.0; python_version < '3.10'', 'pyopenms==3.1.0; python_version >= '3.10'', 'python-dotenv==0.21.0', 'pytorch_lightning==1.8.6', 'scikit-learn==1.1.2; python_version < '3.11'', 'scikit-learn==1.4.1.post1; python_version >= '3.11'', 'seaborn==0.12.0', 'spectrum_utils==0.4.1', 'tensorboard==2.10.1', 'tensorboardX==2.5.1', 'torch==2.2.1', 'tqdm==4.65.0', 'transfusion-asr==0.1.0' 2024-03-06T00:22:33,227 Requirements parsed from 'requirements.txt': 'aiobotocore==2.4.1', 'boto3==1.24.59', 'botocore==1.27.59', 'click==8.1.7', 'cloudpathlib==0.10.0', 'datasets==2.14.5', 'depthcharge-ms==0.1.0', 'fastprogress==1.0.3', 'jiwer==3.0.3', 'matchms==0.22.0', 'matplotlib==3.7.2', 'numba==0.57.1', 'numpy==1.23.3', 'omegaconf==2.2.3', 'pandas==2.0.3', 'polars==0.19.7', 'protobuf==3.19.6', 'pyarrow==15.0.0', 'pyopenms==2.7.0; python_version < '3.10'', 'pyopenms==3.1.0; python_version >= '3.10'', 'python-dotenv==0.21.0', 'pytorch_lightning==1.8.6', 'scikit-learn==1.1.2; python_version < '3.11'', 'scikit-learn==1.4.1.post1; python_version >= '3.11'', 'seaborn==0.12.0', 'spectrum_utils==0.4.1', 'tensorboard==2.10.1', 'tensorboardX==2.5.1', 'torch==2.2.1', 'tqdm==4.65.0', 'transfusion-asr==0.1.0' 2024-03-06T00:22:33,257 running egg_info 2024-03-06T00:22:33,259 creating /tmp/pip-pip-egg-info-pf4pikhh/instanovo.egg-info 2024-03-06T00:22:33,287 writing /tmp/pip-pip-egg-info-pf4pikhh/instanovo.egg-info/PKG-INFO 2024-03-06T00:22:33,294 writing dependency_links to /tmp/pip-pip-egg-info-pf4pikhh/instanovo.egg-info/dependency_links.txt 2024-03-06T00:22:33,300 writing requirements to /tmp/pip-pip-egg-info-pf4pikhh/instanovo.egg-info/requires.txt 2024-03-06T00:22:33,301 writing top-level names to /tmp/pip-pip-egg-info-pf4pikhh/instanovo.egg-info/top_level.txt 2024-03-06T00:22:33,303 writing manifest file '/tmp/pip-pip-egg-info-pf4pikhh/instanovo.egg-info/SOURCES.txt' 2024-03-06T00:22:33,408 reading manifest file '/tmp/pip-pip-egg-info-pf4pikhh/instanovo.egg-info/SOURCES.txt' 2024-03-06T00:22:33,409 adding license file 'LICENSE.md' 2024-03-06T00:22:33,412 writing manifest file '/tmp/pip-pip-egg-info-pf4pikhh/instanovo.egg-info/SOURCES.txt' 2024-03-06T00:22:33,524 Preparing metadata (setup.py): finished with status 'done' 2024-03-06T00:22:33,530 Source in /tmp/pip-wheel-ebav9ds_/instanovo_54675825a97d4e77bffce67a23b5fb87 has version 0.1.7, which satisfies requirement instanovo==0.1.7 from https://files.pythonhosted.org/packages/43/44/0ff9298f682a9b3f261aa8158fa59b77f7829a711fb8dd2e8139c7f2c371/instanovo-0.1.7.tar.gz 2024-03-06T00:22:33,531 Removed instanovo==0.1.7 from https://files.pythonhosted.org/packages/43/44/0ff9298f682a9b3f261aa8158fa59b77f7829a711fb8dd2e8139c7f2c371/instanovo-0.1.7.tar.gz from build tracker '/tmp/pip-build-tracker-zj4l0vko' 2024-03-06T00:22:33,538 Created temporary directory: /tmp/pip-unpack-cwhz97ew 2024-03-06T00:22:33,539 Created temporary directory: /tmp/pip-unpack-elh36anq 2024-03-06T00:22:33,631 Building wheels for collected packages: instanovo 2024-03-06T00:22:33,636 Created temporary directory: /tmp/pip-wheel-nglbgtyx 2024-03-06T00:22:33,636 Building wheel for instanovo (setup.py): started 2024-03-06T00:22:33,638 Destination directory: /tmp/pip-wheel-nglbgtyx 2024-03-06T00:22:33,638 Running command python setup.py bdist_wheel 2024-03-06T00:22:34,396 /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:80: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2024-03-06T00:22:34,396 !! 2024-03-06T00:22:34,397 ******************************************************************************** 2024-03-06T00:22:34,398 Requirements should be satisfied by a PEP 517 installer. 2024-03-06T00:22:34,398 If you are using pip, you can try `pip install --use-pep517`. 2024-03-06T00:22:34,399 ******************************************************************************** 2024-03-06T00:22:34,400 !! 2024-03-06T00:22:34,400 dist.fetch_build_eggs(dist.setup_requires) 2024-03-06T00:22:35,222 Requirements parsed from 'requirements.txt': 'aiobotocore==2.4.1', 'boto3==1.24.59', 'botocore==1.27.59', 'click==8.1.7', 'cloudpathlib==0.10.0', 'datasets==2.14.5', 'depthcharge-ms==0.1.0', 'fastprogress==1.0.3', 'jiwer==3.0.3', 'matchms==0.22.0', 'matplotlib==3.7.2', 'numba==0.57.1', 'numpy==1.23.3', 'omegaconf==2.2.3', 'pandas==2.0.3', 'polars==0.19.7', 'protobuf==3.19.6', 'pyarrow==15.0.0', 'pyopenms==2.7.0; python_version < '3.10'', 'pyopenms==3.1.0; python_version >= '3.10'', 'python-dotenv==0.21.0', 'pytorch_lightning==1.8.6', 'scikit-learn==1.1.2; python_version < '3.11'', 'scikit-learn==1.4.1.post1; python_version >= '3.11'', 'seaborn==0.12.0', 'spectrum_utils==0.4.1', 'tensorboard==2.10.1', 'tensorboardX==2.5.1', 'torch==2.2.1', 'tqdm==4.65.0', 'transfusion-asr==0.1.0' 2024-03-06T00:22:35,223 Requirements parsed from 'requirements.txt': 'aiobotocore==2.4.1', 'boto3==1.24.59', 'botocore==1.27.59', 'click==8.1.7', 'cloudpathlib==0.10.0', 'datasets==2.14.5', 'depthcharge-ms==0.1.0', 'fastprogress==1.0.3', 'jiwer==3.0.3', 'matchms==0.22.0', 'matplotlib==3.7.2', 'numba==0.57.1', 'numpy==1.23.3', 'omegaconf==2.2.3', 'pandas==2.0.3', 'polars==0.19.7', 'protobuf==3.19.6', 'pyarrow==15.0.0', 'pyopenms==2.7.0; python_version < '3.10'', 'pyopenms==3.1.0; python_version >= '3.10'', 'python-dotenv==0.21.0', 'pytorch_lightning==1.8.6', 'scikit-learn==1.1.2; python_version < '3.11'', 'scikit-learn==1.4.1.post1; python_version >= '3.11'', 'seaborn==0.12.0', 'spectrum_utils==0.4.1', 'tensorboard==2.10.1', 'tensorboardX==2.5.1', 'torch==2.2.1', 'tqdm==4.65.0', 'transfusion-asr==0.1.0' 2024-03-06T00:22:35,224 Requirements parsed from 'requirements.txt': 'aiobotocore==2.4.1', 'boto3==1.24.59', 'botocore==1.27.59', 'click==8.1.7', 'cloudpathlib==0.10.0', 'datasets==2.14.5', 'depthcharge-ms==0.1.0', 'fastprogress==1.0.3', 'jiwer==3.0.3', 'matchms==0.22.0', 'matplotlib==3.7.2', 'numba==0.57.1', 'numpy==1.23.3', 'omegaconf==2.2.3', 'pandas==2.0.3', 'polars==0.19.7', 'protobuf==3.19.6', 'pyarrow==15.0.0', 'pyopenms==2.7.0; python_version < '3.10'', 'pyopenms==3.1.0; python_version >= '3.10'', 'python-dotenv==0.21.0', 'pytorch_lightning==1.8.6', 'scikit-learn==1.1.2; python_version < '3.11'', 'scikit-learn==1.4.1.post1; python_version >= '3.11'', 'seaborn==0.12.0', 'spectrum_utils==0.4.1', 'tensorboard==2.10.1', 'tensorboardX==2.5.1', 'torch==2.2.1', 'tqdm==4.65.0', 'transfusion-asr==0.1.0' 2024-03-06T00:22:35,255 running bdist_wheel 2024-03-06T00:22:35,364 running build 2024-03-06T00:22:35,365 running build_py 2024-03-06T00:22:35,396 creating build 2024-03-06T00:22:35,397 creating build/lib 2024-03-06T00:22:35,398 creating build/lib/tests 2024-03-06T00:22:35,399 copying tests/__init__.py -> build/lib/tests 2024-03-06T00:22:35,401 copying tests/conftest.py -> build/lib/tests 2024-03-06T00:22:35,403 creating build/lib/instanovo 2024-03-06T00:22:35,404 copying instanovo/__init__.py -> build/lib/instanovo 2024-03-06T00:22:35,406 copying instanovo/constants.py -> build/lib/instanovo 2024-03-06T00:22:35,408 creating build/lib/tests/integration 2024-03-06T00:22:35,410 copying tests/integration/model_test.py -> build/lib/tests/integration 2024-03-06T00:22:35,412 copying tests/integration/__init__.py -> build/lib/tests/integration 2024-03-06T00:22:35,415 creating build/lib/instanovo/transformer 2024-03-06T00:22:35,416 copying instanovo/transformer/dataset.py -> build/lib/instanovo/transformer 2024-03-06T00:22:35,419 copying instanovo/transformer/train.py -> build/lib/instanovo/transformer 2024-03-06T00:22:35,421 copying instanovo/transformer/__init__.py -> build/lib/instanovo/transformer 2024-03-06T00:22:35,423 copying instanovo/transformer/decoding.py -> build/lib/instanovo/transformer 2024-03-06T00:22:35,425 copying instanovo/transformer/layers.py -> build/lib/instanovo/transformer 2024-03-06T00:22:35,427 copying instanovo/transformer/model.py -> build/lib/instanovo/transformer 2024-03-06T00:22:35,429 copying instanovo/transformer/predict.py -> build/lib/instanovo/transformer 2024-03-06T00:22:35,432 creating build/lib/instanovo/utils 2024-03-06T00:22:35,433 copying instanovo/utils/__init__.py -> build/lib/instanovo/utils 2024-03-06T00:22:35,435 copying instanovo/utils/metrics.py -> build/lib/instanovo/utils 2024-03-06T00:22:35,438 copying instanovo/utils/residues.py -> build/lib/instanovo/utils 2024-03-06T00:22:35,439 copying instanovo/utils/convert_to_ipc.py -> build/lib/instanovo/utils 2024-03-06T00:22:35,442 creating build/lib/instanovo/diffusion 2024-03-06T00:22:35,443 copying instanovo/diffusion/dataset.py -> build/lib/instanovo/diffusion 2024-03-06T00:22:35,446 copying instanovo/diffusion/__init__.py -> build/lib/instanovo/diffusion 2024-03-06T00:22:35,447 copying instanovo/diffusion/multinomial_diffusion.py -> build/lib/instanovo/diffusion 2024-03-06T00:22:35,451 copying instanovo/diffusion/config.py -> build/lib/instanovo/diffusion 2024-03-06T00:22:35,453 copying instanovo/diffusion/layers.py -> build/lib/instanovo/diffusion 2024-03-06T00:22:35,455 copying instanovo/diffusion/model.py -> build/lib/instanovo/diffusion 2024-03-06T00:22:35,458 copying instanovo/diffusion/predict.py -> build/lib/instanovo/diffusion 2024-03-06T00:22:35,460 creating build/lib/instanovo/inference 2024-03-06T00:22:35,461 copying instanovo/inference/knapsack_beam_search.py -> build/lib/instanovo/inference 2024-03-06T00:22:35,464 copying instanovo/inference/beam_search.py -> build/lib/instanovo/inference 2024-03-06T00:22:35,466 copying instanovo/inference/__init__.py -> build/lib/instanovo/inference 2024-03-06T00:22:35,468 copying instanovo/inference/knapsack.py -> build/lib/instanovo/inference 2024-03-06T00:22:35,470 copying instanovo/inference/interfaces.py -> build/lib/instanovo/inference 2024-03-06T00:22:35,472 copying instanovo/inference/diffusion.py -> build/lib/instanovo/inference 2024-03-06T00:22:35,474 running egg_info 2024-03-06T00:22:35,530 writing instanovo.egg-info/PKG-INFO 2024-03-06T00:22:35,536 writing dependency_links to instanovo.egg-info/dependency_links.txt 2024-03-06T00:22:35,540 writing requirements to instanovo.egg-info/requires.txt 2024-03-06T00:22:35,541 writing top-level names to instanovo.egg-info/top_level.txt 2024-03-06T00:22:35,579 reading manifest file 'instanovo.egg-info/SOURCES.txt' 2024-03-06T00:22:35,581 adding license file 'LICENSE.md' 2024-03-06T00:22:35,584 writing manifest file 'instanovo.egg-info/SOURCES.txt' 2024-03-06T00:22:35,620 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-03-06T00:22:35,620 !! 2024-03-06T00:22:35,622 ******************************************************************************** 2024-03-06T00:22:35,622 Please avoid running ``setup.py`` directly. 2024-03-06T00:22:35,623 Instead, use pypa/build, pypa/installer or other 2024-03-06T00:22:35,623 standards-based tools. 2024-03-06T00:22:35,624 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-03-06T00:22:35,625 ******************************************************************************** 2024-03-06T00:22:35,626 !! 2024-03-06T00:22:35,627 self.initialize_options() 2024-03-06T00:22:35,648 installing to build/bdist.linux-armv7l/wheel 2024-03-06T00:22:35,648 running install 2024-03-06T00:22:35,671 running install_lib 2024-03-06T00:22:35,700 creating build/bdist.linux-armv7l 2024-03-06T00:22:35,700 creating build/bdist.linux-armv7l/wheel 2024-03-06T00:22:35,702 creating build/bdist.linux-armv7l/wheel/tests 2024-03-06T00:22:35,704 creating build/bdist.linux-armv7l/wheel/tests/integration 2024-03-06T00:22:35,705 copying build/lib/tests/integration/model_test.py -> build/bdist.linux-armv7l/wheel/tests/integration 2024-03-06T00:22:35,707 copying build/lib/tests/integration/__init__.py -> build/bdist.linux-armv7l/wheel/tests/integration 2024-03-06T00:22:35,709 copying build/lib/tests/__init__.py -> build/bdist.linux-armv7l/wheel/tests 2024-03-06T00:22:35,711 copying build/lib/tests/conftest.py -> build/bdist.linux-armv7l/wheel/tests 2024-03-06T00:22:35,713 creating build/bdist.linux-armv7l/wheel/instanovo 2024-03-06T00:22:35,715 creating build/bdist.linux-armv7l/wheel/instanovo/transformer 2024-03-06T00:22:35,716 copying build/lib/instanovo/transformer/dataset.py -> build/bdist.linux-armv7l/wheel/instanovo/transformer 2024-03-06T00:22:35,718 copying build/lib/instanovo/transformer/train.py -> build/bdist.linux-armv7l/wheel/instanovo/transformer 2024-03-06T00:22:35,721 copying build/lib/instanovo/transformer/__init__.py -> build/bdist.linux-armv7l/wheel/instanovo/transformer 2024-03-06T00:22:35,722 copying build/lib/instanovo/transformer/decoding.py -> build/bdist.linux-armv7l/wheel/instanovo/transformer 2024-03-06T00:22:35,724 copying build/lib/instanovo/transformer/layers.py -> build/bdist.linux-armv7l/wheel/instanovo/transformer 2024-03-06T00:22:35,726 copying build/lib/instanovo/transformer/model.py -> build/bdist.linux-armv7l/wheel/instanovo/transformer 2024-03-06T00:22:35,729 copying build/lib/instanovo/transformer/predict.py -> build/bdist.linux-armv7l/wheel/instanovo/transformer 2024-03-06T00:22:35,732 creating build/bdist.linux-armv7l/wheel/instanovo/utils 2024-03-06T00:22:35,732 copying build/lib/instanovo/utils/__init__.py -> build/bdist.linux-armv7l/wheel/instanovo/utils 2024-03-06T00:22:35,734 copying build/lib/instanovo/utils/metrics.py -> build/bdist.linux-armv7l/wheel/instanovo/utils 2024-03-06T00:22:35,737 copying build/lib/instanovo/utils/residues.py -> build/bdist.linux-armv7l/wheel/instanovo/utils 2024-03-06T00:22:35,739 copying build/lib/instanovo/utils/convert_to_ipc.py -> build/bdist.linux-armv7l/wheel/instanovo/utils 2024-03-06T00:22:35,741 creating build/bdist.linux-armv7l/wheel/instanovo/diffusion 2024-03-06T00:22:35,742 copying build/lib/instanovo/diffusion/dataset.py -> build/bdist.linux-armv7l/wheel/instanovo/diffusion 2024-03-06T00:22:35,745 copying build/lib/instanovo/diffusion/__init__.py -> build/bdist.linux-armv7l/wheel/instanovo/diffusion 2024-03-06T00:22:35,747 copying build/lib/instanovo/diffusion/multinomial_diffusion.py -> build/bdist.linux-armv7l/wheel/instanovo/diffusion 2024-03-06T00:22:35,749 copying build/lib/instanovo/diffusion/config.py -> build/bdist.linux-armv7l/wheel/instanovo/diffusion 2024-03-06T00:22:35,751 copying build/lib/instanovo/diffusion/layers.py -> build/bdist.linux-armv7l/wheel/instanovo/diffusion 2024-03-06T00:22:35,754 copying build/lib/instanovo/diffusion/model.py -> build/bdist.linux-armv7l/wheel/instanovo/diffusion 2024-03-06T00:22:35,756 copying build/lib/instanovo/diffusion/predict.py -> build/bdist.linux-armv7l/wheel/instanovo/diffusion 2024-03-06T00:22:35,758 copying build/lib/instanovo/__init__.py -> build/bdist.linux-armv7l/wheel/instanovo 2024-03-06T00:22:35,760 creating build/bdist.linux-armv7l/wheel/instanovo/inference 2024-03-06T00:22:35,761 copying build/lib/instanovo/inference/knapsack_beam_search.py -> build/bdist.linux-armv7l/wheel/instanovo/inference 2024-03-06T00:22:35,763 copying build/lib/instanovo/inference/beam_search.py -> build/bdist.linux-armv7l/wheel/instanovo/inference 2024-03-06T00:22:35,766 copying build/lib/instanovo/inference/__init__.py -> build/bdist.linux-armv7l/wheel/instanovo/inference 2024-03-06T00:22:35,768 copying build/lib/instanovo/inference/knapsack.py -> build/bdist.linux-armv7l/wheel/instanovo/inference 2024-03-06T00:22:35,770 copying build/lib/instanovo/inference/interfaces.py -> build/bdist.linux-armv7l/wheel/instanovo/inference 2024-03-06T00:22:35,772 copying build/lib/instanovo/inference/diffusion.py -> build/bdist.linux-armv7l/wheel/instanovo/inference 2024-03-06T00:22:35,775 copying build/lib/instanovo/constants.py -> build/bdist.linux-armv7l/wheel/instanovo 2024-03-06T00:22:35,776 running install_data 2024-03-06T00:22:35,805 creating build/bdist.linux-armv7l/wheel/instanovo-0.1.7.data 2024-03-06T00:22:35,805 creating build/bdist.linux-armv7l/wheel/instanovo-0.1.7.data/data 2024-03-06T00:22:35,806 copying requirements.txt -> build/bdist.linux-armv7l/wheel/instanovo-0.1.7.data/data/. 2024-03-06T00:22:35,808 running install_egg_info 2024-03-06T00:22:35,837 Copying instanovo.egg-info to build/bdist.linux-armv7l/wheel/instanovo-0.1.7-py3.11.egg-info 2024-03-06T00:22:35,850 running install_scripts 2024-03-06T00:22:35,879 creating build/bdist.linux-armv7l/wheel/instanovo-0.1.7.dist-info/WHEEL 2024-03-06T00:22:35,882 creating '/tmp/pip-wheel-nglbgtyx/instanovo-0.1.7-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-03-06T00:22:35,884 adding 'instanovo/__init__.py' 2024-03-06T00:22:35,885 adding 'instanovo/constants.py' 2024-03-06T00:22:35,887 adding 'instanovo/diffusion/__init__.py' 2024-03-06T00:22:35,888 adding 'instanovo/diffusion/config.py' 2024-03-06T00:22:35,890 adding 'instanovo/diffusion/dataset.py' 2024-03-06T00:22:35,893 adding 'instanovo/diffusion/layers.py' 2024-03-06T00:22:35,895 adding 'instanovo/diffusion/model.py' 2024-03-06T00:22:35,897 adding 'instanovo/diffusion/multinomial_diffusion.py' 2024-03-06T00:22:35,899 adding 'instanovo/diffusion/predict.py' 2024-03-06T00:22:35,900 adding 'instanovo/inference/__init__.py' 2024-03-06T00:22:35,903 adding 'instanovo/inference/beam_search.py' 2024-03-06T00:22:35,905 adding 'instanovo/inference/diffusion.py' 2024-03-06T00:22:35,906 adding 'instanovo/inference/interfaces.py' 2024-03-06T00:22:35,908 adding 'instanovo/inference/knapsack.py' 2024-03-06T00:22:35,909 adding 'instanovo/inference/knapsack_beam_search.py' 2024-03-06T00:22:35,911 adding 'instanovo/transformer/__init__.py' 2024-03-06T00:22:35,912 adding 'instanovo/transformer/dataset.py' 2024-03-06T00:22:35,914 adding 'instanovo/transformer/decoding.py' 2024-03-06T00:22:35,915 adding 'instanovo/transformer/layers.py' 2024-03-06T00:22:35,917 adding 'instanovo/transformer/model.py' 2024-03-06T00:22:35,919 adding 'instanovo/transformer/predict.py' 2024-03-06T00:22:35,921 adding 'instanovo/transformer/train.py' 2024-03-06T00:22:35,923 adding 'instanovo/utils/__init__.py' 2024-03-06T00:22:35,925 adding 'instanovo/utils/convert_to_ipc.py' 2024-03-06T00:22:35,927 adding 'instanovo/utils/metrics.py' 2024-03-06T00:22:35,928 adding 'instanovo/utils/residues.py' 2024-03-06T00:22:35,930 adding 'instanovo-0.1.7.data/data/requirements.txt' 2024-03-06T00:22:35,933 adding 'tests/__init__.py' 2024-03-06T00:22:35,934 adding 'tests/conftest.py' 2024-03-06T00:22:35,936 adding 'tests/integration/__init__.py' 2024-03-06T00:22:35,938 adding 'tests/integration/model_test.py' 2024-03-06T00:22:35,940 adding 'instanovo-0.1.7.dist-info/LICENSE.md' 2024-03-06T00:22:35,942 adding 'instanovo-0.1.7.dist-info/METADATA' 2024-03-06T00:22:35,943 adding 'instanovo-0.1.7.dist-info/WHEEL' 2024-03-06T00:22:35,944 adding 'instanovo-0.1.7.dist-info/top_level.txt' 2024-03-06T00:22:35,945 adding 'instanovo-0.1.7.dist-info/RECORD' 2024-03-06T00:22:35,947 removing build/bdist.linux-armv7l/wheel 2024-03-06T00:22:36,072 Building wheel for instanovo (setup.py): finished with status 'done' 2024-03-06T00:22:36,075 Created wheel for instanovo: filename=instanovo-0.1.7-py3-none-any.whl size=61175 sha256=bebfa6835cb7fa57c9fc7d68fb6d4b6403018fc99945453687f4e4ea8d4c3687 2024-03-06T00:22:36,077 Stored in directory: /tmp/pip-ephem-wheel-cache-xqhhnaf_/wheels/96/49/62/55d88ba1e61091fd85884eaddfb167f75a2b632c002a3ef5db 2024-03-06T00:22:36,090 Successfully built instanovo 2024-03-06T00:22:36,095 Removed build tracker: '/tmp/pip-build-tracker-zj4l0vko'