2024-03-06T22:56:04,597 Created temporary directory: /tmp/pip-build-tracker-f7y5scex 2024-03-06T22:56:04,598 Initialized build tracking at /tmp/pip-build-tracker-f7y5scex 2024-03-06T22:56:04,598 Created build tracker: /tmp/pip-build-tracker-f7y5scex 2024-03-06T22:56:04,599 Entered build tracker: /tmp/pip-build-tracker-f7y5scex 2024-03-06T22:56:04,599 Created temporary directory: /tmp/pip-wheel-gygff_zi 2024-03-06T22:56:04,603 Created temporary directory: /tmp/pip-ephem-wheel-cache-z24oqrfk 2024-03-06T22:56:04,625 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-03-06T22:56:04,628 2 location(s) to search for versions of gctree: 2024-03-06T22:56:04,628 * https://pypi.org/simple/gctree/ 2024-03-06T22:56:04,628 * https://www.piwheels.org/simple/gctree/ 2024-03-06T22:56:04,629 Fetching project page and analyzing links: https://pypi.org/simple/gctree/ 2024-03-06T22:56:04,630 Getting page https://pypi.org/simple/gctree/ 2024-03-06T22:56:04,631 Found index url https://pypi.org/simple/ 2024-03-06T22:56:04,884 Fetched page https://pypi.org/simple/gctree/ as application/vnd.pypi.simple.v1+json 2024-03-06T22:56:04,891 Skipping link: No binaries permitted for gctree: https://files.pythonhosted.org/packages/ae/99/02182436d8b750f44433736c6def868ec8b4dbb93acc3aba44c4a3797560/gctree-3.0.1-py3-none-any.whl (from https://pypi.org/simple/gctree/) (requires-python:>=3.7) 2024-03-06T22:56:04,892 Found link https://files.pythonhosted.org/packages/42/42/8c475136eb4148560bf434fcbb57541344ff24911e86b0363ba3f8d0d774/gctree-3.0.1.tar.gz (from https://pypi.org/simple/gctree/) (requires-python:>=3.7), version: 3.0.1 2024-03-06T22:56:04,893 Skipping link: No binaries permitted for gctree: https://files.pythonhosted.org/packages/50/fd/8395cf1f810b8df1d80217b9704ff5a7566393f1c572a85c516b8939ec16/gctree-3.0.2-py3-none-any.whl (from https://pypi.org/simple/gctree/) (requires-python:>=3.7) 2024-03-06T22:56:04,894 Found link https://files.pythonhosted.org/packages/88/03/a88b24d38722395bfa0916db440c28199cfe38c5feedc28d591f89973368/gctree-3.0.2.tar.gz (from https://pypi.org/simple/gctree/) (requires-python:>=3.7), version: 3.0.2 2024-03-06T22:56:04,894 Skipping link: No binaries permitted for gctree: https://files.pythonhosted.org/packages/16/26/255927e682f42e367656ac3141504244ae24a43dd3dab55a097150a8ab16/gctree-3.1.0-py3-none-any.whl (from https://pypi.org/simple/gctree/) (requires-python:>=3.7) 2024-03-06T22:56:04,895 Found link https://files.pythonhosted.org/packages/17/3d/4dddf5697eb950724df438fedd95b470ae2f608ed5a52ce9584e5e5777d1/gctree-3.1.0.tar.gz (from https://pypi.org/simple/gctree/) (requires-python:>=3.7), version: 3.1.0 2024-03-06T22:56:04,896 Skipping link: No binaries permitted for gctree: https://files.pythonhosted.org/packages/57/fc/206b21564c8d238d1b8858796c0a4376e980c2f6e0a72ead6a1f0629d9df/gctree-3.1.1-py3-none-any.whl (from https://pypi.org/simple/gctree/) (requires-python:>=3.7) 2024-03-06T22:56:04,897 Found link https://files.pythonhosted.org/packages/f7/44/cd73e141bd79a548201709dfec05cc872cff8aefaa3b45f49558fd224735/gctree-3.1.1.tar.gz (from https://pypi.org/simple/gctree/) (requires-python:>=3.7), version: 3.1.1 2024-03-06T22:56:04,898 Skipping link: No binaries permitted for gctree: https://files.pythonhosted.org/packages/01/d7/ea1714fcd01dbc885da7ce8e65895fb698e12574189ab40d0dd3fe79344f/gctree-3.2.0-py3-none-any.whl (from https://pypi.org/simple/gctree/) (requires-python:>=3.7) 2024-03-06T22:56:04,899 Found link https://files.pythonhosted.org/packages/8b/59/ef45e27c111fa0d9ed2c02951018cda4bf04d6a4d23a6a7b59ad2f35b1b4/gctree-3.2.0.tar.gz (from https://pypi.org/simple/gctree/) (requires-python:>=3.7), version: 3.2.0 2024-03-06T22:56:04,900 Skipping link: No binaries permitted for gctree: https://files.pythonhosted.org/packages/05/b9/af1b313b7d21be9ff2375505b90f05324e312142c7f51afd14c40c487555/gctree-3.2.1-py3-none-any.whl (from https://pypi.org/simple/gctree/) (requires-python:>=3.7) 2024-03-06T22:56:04,901 Found link https://files.pythonhosted.org/packages/fd/78/f8525323a23e9fc69db323e0684e5e6d06b3bcc8e4237db78e39ea809557/gctree-3.2.1.tar.gz (from https://pypi.org/simple/gctree/) (requires-python:>=3.7), version: 3.2.1 2024-03-06T22:56:04,901 Skipping link: No binaries permitted for gctree: https://files.pythonhosted.org/packages/11/ac/41dd4015cd4e48cd0ac923959c0fa9a20ad9390a993184026e5ce1b3c5f3/gctree-3.3.0-py3-none-any.whl (from https://pypi.org/simple/gctree/) (requires-python:>=3.7) 2024-03-06T22:56:04,903 Found link https://files.pythonhosted.org/packages/88/53/f0821a70efdd8e1a605d21fbec29c38a4528ff585f528eb6c9c0c94173cc/gctree-3.3.0.tar.gz (from https://pypi.org/simple/gctree/) (requires-python:>=3.7), version: 3.3.0 2024-03-06T22:56:04,903 Skipping link: No binaries permitted for gctree: 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https://files.pythonhosted.org/packages/7c/b9/6a66e565d2b660f196488370c9845213d5ae560b0bc922008cd5c40ddbdf/gctree-4.0.2.tar.gz (from https://pypi.org/simple/gctree/) (requires-python:>=3.7, <3.10) 2024-03-06T22:56:04,909 Skipping link: No binaries permitted for gctree: https://files.pythonhosted.org/packages/fc/64/44631a2d9f897c98c7c4d85de4eaf6e6bd09319f1f044a5558edd2e71c5e/gctree-4.0.3-py3-none-any.whl (from https://pypi.org/simple/gctree/) (requires-python:>=3.7, <3.10) 2024-03-06T22:56:04,910 Link requires a different Python (3.11.2 not in: '>=3.7, <3.10'): https://files.pythonhosted.org/packages/96/7d/9532bf9cd4c0339760228e3c08d37e01f2b60e2886b732a05b965d0048d1/gctree-4.0.3.tar.gz (from https://pypi.org/simple/gctree/) (requires-python:>=3.7, <3.10) 2024-03-06T22:56:04,910 Skipping link: 4.0.3 Requires-Python >=3.7, <3.10: https://files.pythonhosted.org/packages/96/7d/9532bf9cd4c0339760228e3c08d37e01f2b60e2886b732a05b965d0048d1/gctree-4.0.3.tar.gz (from https://pypi.org/simple/gctree/) (requires-python:>=3.7, <3.10) 2024-03-06T22:56:04,911 Skipping link: No binaries permitted for gctree: https://files.pythonhosted.org/packages/7f/83/c9a84bbe28946cbc583c3b20de923bd9671f97e4c2e2fd42c57685b64ac4/gctree-4.0.4-py3-none-any.whl (from https://pypi.org/simple/gctree/) (requires-python:>=3.7, <3.10) 2024-03-06T22:56:04,912 Link requires a different Python (3.11.2 not in: '>=3.7, <3.10'): https://files.pythonhosted.org/packages/12/28/4a4f727903c4a97bd0fe3e6d27863590836ef1951b941390332fb3592694/gctree-4.0.4.tar.gz (from https://pypi.org/simple/gctree/) (requires-python:>=3.7, <3.10) 2024-03-06T22:56:04,913 Skipping link: 4.0.4 Requires-Python >=3.7, <3.10: https://files.pythonhosted.org/packages/12/28/4a4f727903c4a97bd0fe3e6d27863590836ef1951b941390332fb3592694/gctree-4.0.4.tar.gz (from https://pypi.org/simple/gctree/) (requires-python:>=3.7, <3.10) 2024-03-06T22:56:04,914 Skipping link: No binaries permitted for gctree: https://files.pythonhosted.org/packages/56/6f/58968a3f8627be293b7218fe2002a25e6cfb2c2e3d26d884b77b0b1d925f/gctree-4.1.0-py3-none-any.whl (from https://pypi.org/simple/gctree/) (requires-python:>=3.7, <3.10) 2024-03-06T22:56:04,915 Link requires a different Python (3.11.2 not in: '>=3.7, <3.10'): https://files.pythonhosted.org/packages/54/cf/cada7d10923cc6db1714961f3f97e7c73fcabd4dc352f4439881f9a78a50/gctree-4.1.0.tar.gz (from https://pypi.org/simple/gctree/) (requires-python:>=3.7, <3.10) 2024-03-06T22:56:04,915 Skipping link: 4.1.0 Requires-Python >=3.7, <3.10: https://files.pythonhosted.org/packages/54/cf/cada7d10923cc6db1714961f3f97e7c73fcabd4dc352f4439881f9a78a50/gctree-4.1.0.tar.gz (from https://pypi.org/simple/gctree/) (requires-python:>=3.7, <3.10) 2024-03-06T22:56:04,915 Skipping link: No binaries permitted for gctree: https://files.pythonhosted.org/packages/d1/21/673682a10499e085d3f5ebaaab46793e5986a33a5530a85bc52447cdd516/gctree-4.1.1-py3-none-any.whl (from https://pypi.org/simple/gctree/) (requires-python:>=3.7) 2024-03-06T22:56:04,916 Found link https://files.pythonhosted.org/packages/af/49/bc4de9030bd09323cec4255c18ff9105b5ec873b8c7d885b3f2f9a8f6d48/gctree-4.1.1.tar.gz (from https://pypi.org/simple/gctree/) (requires-python:>=3.7), version: 4.1.1 2024-03-06T22:56:04,917 Skipping link: No binaries permitted for gctree: https://files.pythonhosted.org/packages/8c/7b/0f10f34b9cab3ccfea6984edb7fc79b6d92438e096044f15a712f3f85950/gctree-4.1.2-py3-none-any.whl (from https://pypi.org/simple/gctree/) (requires-python:>=3.7) 2024-03-06T22:56:04,918 Found link https://files.pythonhosted.org/packages/a0/a0/16fcbbb30b2e4a1f41a1e9da7ee0a349ec693ebcefef05f7af46056ad379/gctree-4.1.2.tar.gz (from https://pypi.org/simple/gctree/) (requires-python:>=3.7), version: 4.1.2 2024-03-06T22:56:04,919 Skipping link: No binaries permitted for gctree: https://files.pythonhosted.org/packages/57/d1/219db08dde00ba376fb0c9494c70a81bb1e85a46390259c55a1f4ebe4345/gctree-4.1.3-py3-none-any.whl (from https://pypi.org/simple/gctree/) (requires-python:>=3.7) 2024-03-06T22:56:04,920 Found link https://files.pythonhosted.org/packages/ab/bc/f5bf0a70174bc2134d9a963449563f9e460624e6aa0d51cd7651550c715d/gctree-4.1.3.tar.gz (from https://pypi.org/simple/gctree/) (requires-python:>=3.7), version: 4.1.3 2024-03-06T22:56:04,920 Skipping link: No binaries permitted for gctree: https://files.pythonhosted.org/packages/7a/8c/43c8578c8f814de848f42526b56a8b37c3e25b3a3817f3fb42d0814777b6/gctree-4.1.4-py3-none-any.whl (from https://pypi.org/simple/gctree/) (requires-python:>=3.7) 2024-03-06T22:56:04,921 Found link https://files.pythonhosted.org/packages/e8/62/f8b96bbf68ecccd492827f1b432e3929adc925ff0f04787e54e29b52acf0/gctree-4.1.4.tar.gz (from https://pypi.org/simple/gctree/) (requires-python:>=3.7), version: 4.1.4 2024-03-06T22:56:04,922 Fetching project page and analyzing links: https://www.piwheels.org/simple/gctree/ 2024-03-06T22:56:04,923 Getting page https://www.piwheels.org/simple/gctree/ 2024-03-06T22:56:04,924 Found index url https://www.piwheels.org/simple/ 2024-03-06T22:56:05,248 Fetched page https://www.piwheels.org/simple/gctree/ as text/html 2024-03-06T22:56:05,256 Skipping link: No binaries permitted for gctree: https://www.piwheels.org/simple/gctree/gctree-4.1.3-py3-none-any.whl#sha256=738c5fc3a43a67f98e31257951a9056c88704d2031b4fb3ea31c0c77fb9031ab (from https://www.piwheels.org/simple/gctree/) (requires-python:>=3.7) 2024-03-06T22:56:05,257 Skipping link: No binaries permitted for gctree: https://www.piwheels.org/simple/gctree/gctree-4.1.2-py3-none-any.whl#sha256=23cb5fd84d5c73efbd46ef01b2fb1594b813a6372a3be6902f1361782a74be4c (from https://www.piwheels.org/simple/gctree/) (requires-python:>=3.7) 2024-03-06T22:56:05,258 Skipping link: No binaries permitted for gctree: https://www.piwheels.org/simple/gctree/gctree-4.1.1-py3-none-any.whl#sha256=c4c9c9b70d727579f411c1dad9947daae71c788a5eef104a34b8f0418bfc4949 (from https://www.piwheels.org/simple/gctree/) (requires-python:>=3.7) 2024-03-06T22:56:05,259 Skipping link: No binaries permitted for gctree: https://www.piwheels.org/simple/gctree/gctree-4.1.0-py3-none-any.whl#sha256=a34cc32302e6da08516db3fd749851d6bce00af45d26a2d5ee2f806060bf131e (from https://www.piwheels.org/simple/gctree/) (requires-python:>=3.7, <3.10) 2024-03-06T22:56:05,259 Skipping link: No binaries permitted for gctree: https://www.piwheels.org/simple/gctree/gctree-4.0.4-py3-none-any.whl#sha256=aa319ba37ebd163bb4426f4cb08d4f2a8d17d36c96a29d170f1216b6bed23a4c (from https://www.piwheels.org/simple/gctree/) (requires-python:>=3.7, <3.10) 2024-03-06T22:56:05,260 Skipping link: No binaries permitted for gctree: https://www.piwheels.org/simple/gctree/gctree-4.0.3-py3-none-any.whl#sha256=616bb977254858dc11bbc69b4875b65b8bc85835cd5c167e981e0ed58da240fb (from https://www.piwheels.org/simple/gctree/) (requires-python:>=3.7, <3.10) 2024-03-06T22:56:05,260 Skipping link: No binaries permitted for gctree: https://www.piwheels.org/simple/gctree/gctree-4.0.2-py3-none-any.whl#sha256=ac1084b37162bd7e3bfcd6d5d2bdefe1f1395d622e246ceff7751dd505e08ef2 (from https://www.piwheels.org/simple/gctree/) (requires-python:>=3.7, <3.10) 2024-03-06T22:56:05,261 Skipping link: No binaries permitted for gctree: https://www.piwheels.org/simple/gctree/gctree-4.0.1-py3-none-any.whl#sha256=ae0ca1578cdf0ea0171ae16678d4d779e09b39c97c3f642cdd10d3fe3516a587 (from https://www.piwheels.org/simple/gctree/) (requires-python:>=3.7, <3.10) 2024-03-06T22:56:05,262 Skipping link: No binaries permitted for gctree: https://www.piwheels.org/simple/gctree/gctree-4.0.0-py3-none-any.whl#sha256=a1f66864f53502be30d86ce2dd4483977182696d94fe972ed22226d10a695414 (from https://www.piwheels.org/simple/gctree/) (requires-python:>=3.7) 2024-03-06T22:56:05,262 Skipping link: No binaries permitted for gctree: https://www.piwheels.org/simple/gctree/gctree-3.3.0-py3-none-any.whl#sha256=ce93398a0f8583409862074ebba81fbe34e794cc3c2becc41634b3054af40be5 (from https://www.piwheels.org/simple/gctree/) (requires-python:>=3.7) 2024-03-06T22:56:05,263 Skipping link: No binaries permitted for gctree: https://www.piwheels.org/simple/gctree/gctree-3.2.1-py3-none-any.whl#sha256=c70b1314390e08e6e42ae5c735ed5c4654968bd291f1d439c6eef474bf6ec097 (from https://www.piwheels.org/simple/gctree/) (requires-python:>=3.7) 2024-03-06T22:56:05,264 Skipping link: No binaries permitted for gctree: https://www.piwheels.org/simple/gctree/gctree-3.2.0-py3-none-any.whl#sha256=e5e4ac94e043f18a1bf3113db15dba4b960179dc19768f26a36d25930ec4a209 (from https://www.piwheels.org/simple/gctree/) (requires-python:>=3.7) 2024-03-06T22:56:05,264 Skipping link: No binaries permitted for gctree: https://www.piwheels.org/simple/gctree/gctree-3.1.1-py3-none-any.whl#sha256=2cf455bc4669922df4f516e5103b60bbb1ac2930d3f43f58769d440bac6b40c0 (from https://www.piwheels.org/simple/gctree/) (requires-python:>=3.7) 2024-03-06T22:56:05,265 Skipping link: No binaries permitted for gctree: https://www.piwheels.org/simple/gctree/gctree-3.1.0-py3-none-any.whl#sha256=a5c951f3fa15a8036dbe97f62c3fc7d5209e10999a4282f60670d62082c1029d (from https://www.piwheels.org/simple/gctree/) (requires-python:>=3.7) 2024-03-06T22:56:05,266 Skipping link: No binaries permitted for gctree: https://www.piwheels.org/simple/gctree/gctree-3.0.2-py3-none-any.whl#sha256=11757fe240b0f8376f1a7c106e36938a851bfe8e4dc839120be5bac0a4b10076 (from https://www.piwheels.org/simple/gctree/) (requires-python:>=3.7) 2024-03-06T22:56:05,266 Skipping link: No binaries permitted for gctree: https://www.piwheels.org/simple/gctree/gctree-3.0.1-py3-none-any.whl#sha256=fcd53765764008087a1e47aa8ebfca40f45ec63ab65a6055740bd3c975d17d02 (from https://www.piwheels.org/simple/gctree/) (requires-python:>=3.7) 2024-03-06T22:56:05,267 Skipping link: not a file: https://www.piwheels.org/simple/gctree/ 2024-03-06T22:56:05,268 Skipping link: not a file: https://pypi.org/simple/gctree/ 2024-03-06T22:56:05,297 Given no hashes to check 1 links for project 'gctree': discarding no candidates 2024-03-06T22:56:05,315 Collecting gctree==4.1.4 2024-03-06T22:56:05,318 Created temporary directory: /tmp/pip-unpack-q7s_bbpb 2024-03-06T22:56:05,534 Downloading gctree-4.1.4.tar.gz (82 kB) 2024-03-06T22:56:05,650 Added gctree==4.1.4 from https://files.pythonhosted.org/packages/e8/62/f8b96bbf68ecccd492827f1b432e3929adc925ff0f04787e54e29b52acf0/gctree-4.1.4.tar.gz to build tracker '/tmp/pip-build-tracker-f7y5scex' 2024-03-06T22:56:05,652 Running setup.py (path:/tmp/pip-wheel-gygff_zi/gctree_d3e14b783ae941a6bc6be7297889ab94/setup.py) egg_info for package gctree 2024-03-06T22:56:05,653 Created temporary directory: /tmp/pip-pip-egg-info-2zn6e1s8 2024-03-06T22:56:05,653 Preparing metadata (setup.py): started 2024-03-06T22:56:05,654 Running command python setup.py egg_info 2024-03-06T22:56:06,715 running egg_info 2024-03-06T22:56:06,716 creating /tmp/pip-pip-egg-info-2zn6e1s8/gctree.egg-info 2024-03-06T22:56:06,740 writing /tmp/pip-pip-egg-info-2zn6e1s8/gctree.egg-info/PKG-INFO 2024-03-06T22:56:06,743 writing dependency_links to /tmp/pip-pip-egg-info-2zn6e1s8/gctree.egg-info/dependency_links.txt 2024-03-06T22:56:06,744 writing entry points to /tmp/pip-pip-egg-info-2zn6e1s8/gctree.egg-info/entry_points.txt 2024-03-06T22:56:06,746 writing requirements to /tmp/pip-pip-egg-info-2zn6e1s8/gctree.egg-info/requires.txt 2024-03-06T22:56:06,747 writing top-level names to /tmp/pip-pip-egg-info-2zn6e1s8/gctree.egg-info/top_level.txt 2024-03-06T22:56:06,748 writing manifest file '/tmp/pip-pip-egg-info-2zn6e1s8/gctree.egg-info/SOURCES.txt' 2024-03-06T22:56:06,799 reading manifest file '/tmp/pip-pip-egg-info-2zn6e1s8/gctree.egg-info/SOURCES.txt' 2024-03-06T22:56:06,801 reading manifest template 'MANIFEST.in' 2024-03-06T22:56:06,802 adding license file 'LICENSE' 2024-03-06T22:56:06,804 writing manifest file '/tmp/pip-pip-egg-info-2zn6e1s8/gctree.egg-info/SOURCES.txt' 2024-03-06T22:56:06,914 Preparing metadata (setup.py): finished with status 'done' 2024-03-06T22:56:06,918 Source in /tmp/pip-wheel-gygff_zi/gctree_d3e14b783ae941a6bc6be7297889ab94 has version 4.1.4, which satisfies requirement gctree==4.1.4 from https://files.pythonhosted.org/packages/e8/62/f8b96bbf68ecccd492827f1b432e3929adc925ff0f04787e54e29b52acf0/gctree-4.1.4.tar.gz 2024-03-06T22:56:06,919 Removed gctree==4.1.4 from https://files.pythonhosted.org/packages/e8/62/f8b96bbf68ecccd492827f1b432e3929adc925ff0f04787e54e29b52acf0/gctree-4.1.4.tar.gz from build tracker '/tmp/pip-build-tracker-f7y5scex' 2024-03-06T22:56:06,925 Created temporary directory: /tmp/pip-unpack-o951o6t_ 2024-03-06T22:56:06,926 Created temporary directory: /tmp/pip-unpack-pdckrh6r 2024-03-06T22:56:06,937 Building wheels for collected packages: gctree 2024-03-06T22:56:06,941 Created temporary directory: /tmp/pip-wheel-un2w8xfp 2024-03-06T22:56:06,942 Building wheel for gctree (setup.py): started 2024-03-06T22:56:06,943 Destination directory: /tmp/pip-wheel-un2w8xfp 2024-03-06T22:56:06,944 Running command python setup.py bdist_wheel 2024-03-06T22:56:07,972 running bdist_wheel 2024-03-06T22:56:08,044 running build 2024-03-06T22:56:08,044 running build_py 2024-03-06T22:56:08,049 creating build 2024-03-06T22:56:08,050 creating build/lib 2024-03-06T22:56:08,051 creating build/lib/gctree 2024-03-06T22:56:08,052 copying gctree/isotyping.py -> build/lib/gctree 2024-03-06T22:56:08,055 copying gctree/__init__.py -> build/lib/gctree 2024-03-06T22:56:08,057 copying gctree/utils.py -> build/lib/gctree 2024-03-06T22:56:08,058 copying gctree/mutation_model.py -> build/lib/gctree 2024-03-06T22:56:08,061 copying gctree/branching_processes.py -> build/lib/gctree 2024-03-06T22:56:08,064 copying gctree/_version.py -> build/lib/gctree 2024-03-06T22:56:08,066 copying gctree/deduplicate.py -> build/lib/gctree 2024-03-06T22:56:08,068 copying gctree/isotype.py -> build/lib/gctree 2024-03-06T22:56:08,070 copying gctree/mkconfig.py -> build/lib/gctree 2024-03-06T22:56:08,072 copying gctree/phylip_parse.py -> build/lib/gctree 2024-03-06T22:56:08,074 copying gctree/cli.py -> build/lib/gctree 2024-03-06T22:56:08,078 UPDATING build/lib/gctree/_version.py 2024-03-06T22:56:08,079 set build/lib/gctree/_version.py to '4.1.4' 2024-03-06T22:56:08,103 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-03-06T22:56:08,104 !! 2024-03-06T22:56:08,105 ******************************************************************************** 2024-03-06T22:56:08,106 Please avoid running ``setup.py`` directly. 2024-03-06T22:56:08,106 Instead, use pypa/build, pypa/installer or other 2024-03-06T22:56:08,107 standards-based tools. 2024-03-06T22:56:08,108 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-03-06T22:56:08,108 ******************************************************************************** 2024-03-06T22:56:08,109 !! 2024-03-06T22:56:08,110 self.initialize_options() 2024-03-06T22:56:08,128 installing to build/bdist.linux-armv7l/wheel 2024-03-06T22:56:08,129 running install 2024-03-06T22:56:08,152 running install_lib 2024-03-06T22:56:08,176 creating build/bdist.linux-armv7l 2024-03-06T22:56:08,177 creating build/bdist.linux-armv7l/wheel 2024-03-06T22:56:08,178 creating build/bdist.linux-armv7l/wheel/gctree 2024-03-06T22:56:08,179 copying build/lib/gctree/isotyping.py -> build/bdist.linux-armv7l/wheel/gctree 2024-03-06T22:56:08,182 copying build/lib/gctree/__init__.py -> build/bdist.linux-armv7l/wheel/gctree 2024-03-06T22:56:08,184 copying build/lib/gctree/utils.py -> build/bdist.linux-armv7l/wheel/gctree 2024-03-06T22:56:08,186 copying build/lib/gctree/mutation_model.py -> build/bdist.linux-armv7l/wheel/gctree 2024-03-06T22:56:08,189 copying build/lib/gctree/branching_processes.py -> build/bdist.linux-armv7l/wheel/gctree 2024-03-06T22:56:08,193 copying build/lib/gctree/_version.py -> build/bdist.linux-armv7l/wheel/gctree 2024-03-06T22:56:08,194 copying build/lib/gctree/deduplicate.py -> build/bdist.linux-armv7l/wheel/gctree 2024-03-06T22:56:08,197 copying build/lib/gctree/isotype.py -> build/bdist.linux-armv7l/wheel/gctree 2024-03-06T22:56:08,199 copying build/lib/gctree/mkconfig.py -> build/bdist.linux-armv7l/wheel/gctree 2024-03-06T22:56:08,201 copying build/lib/gctree/phylip_parse.py -> build/bdist.linux-armv7l/wheel/gctree 2024-03-06T22:56:08,203 copying build/lib/gctree/cli.py -> build/bdist.linux-armv7l/wheel/gctree 2024-03-06T22:56:08,206 running install_egg_info 2024-03-06T22:56:08,237 running egg_info 2024-03-06T22:56:08,260 writing gctree.egg-info/PKG-INFO 2024-03-06T22:56:08,263 writing dependency_links to gctree.egg-info/dependency_links.txt 2024-03-06T22:56:08,265 writing entry points to gctree.egg-info/entry_points.txt 2024-03-06T22:56:08,266 writing requirements to gctree.egg-info/requires.txt 2024-03-06T22:56:08,267 writing top-level names to gctree.egg-info/top_level.txt 2024-03-06T22:56:08,297 reading manifest file 'gctree.egg-info/SOURCES.txt' 2024-03-06T22:56:08,300 reading manifest template 'MANIFEST.in' 2024-03-06T22:56:08,300 adding license file 'LICENSE' 2024-03-06T22:56:08,303 writing manifest file 'gctree.egg-info/SOURCES.txt' 2024-03-06T22:56:08,307 Copying gctree.egg-info to build/bdist.linux-armv7l/wheel/gctree-4.1.4-py3.11.egg-info 2024-03-06T22:56:08,317 running install_scripts 2024-03-06T22:56:08,333 creating build/bdist.linux-armv7l/wheel/gctree-4.1.4.dist-info/WHEEL 2024-03-06T22:56:08,336 creating '/tmp/pip-wheel-un2w8xfp/gctree-4.1.4-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-03-06T22:56:08,338 adding 'gctree/__init__.py' 2024-03-06T22:56:08,339 adding 'gctree/_version.py' 2024-03-06T22:56:08,349 adding 'gctree/branching_processes.py' 2024-03-06T22:56:08,353 adding 'gctree/cli.py' 2024-03-06T22:56:08,355 adding 'gctree/deduplicate.py' 2024-03-06T22:56:08,357 adding 'gctree/isotype.py' 2024-03-06T22:56:08,359 adding 'gctree/isotyping.py' 2024-03-06T22:56:08,361 adding 'gctree/mkconfig.py' 2024-03-06T22:56:08,364 adding 'gctree/mutation_model.py' 2024-03-06T22:56:08,366 adding 'gctree/phylip_parse.py' 2024-03-06T22:56:08,368 adding 'gctree/utils.py' 2024-03-06T22:56:08,374 adding 'gctree-4.1.4.dist-info/LICENSE' 2024-03-06T22:56:08,375 adding 'gctree-4.1.4.dist-info/METADATA' 2024-03-06T22:56:08,376 adding 'gctree-4.1.4.dist-info/WHEEL' 2024-03-06T22:56:08,377 adding 'gctree-4.1.4.dist-info/entry_points.txt' 2024-03-06T22:56:08,378 adding 'gctree-4.1.4.dist-info/top_level.txt' 2024-03-06T22:56:08,379 adding 'gctree-4.1.4.dist-info/RECORD' 2024-03-06T22:56:08,381 removing build/bdist.linux-armv7l/wheel 2024-03-06T22:56:08,496 Building wheel for gctree (setup.py): finished with status 'done' 2024-03-06T22:56:08,499 Created wheel for gctree: filename=gctree-4.1.4-py3-none-any.whl size=65023 sha256=0a6b1953aa4146b11742d50dddd431a50305ba811b2832921fbcf533a06c2e62 2024-03-06T22:56:08,500 Stored in directory: /tmp/pip-ephem-wheel-cache-z24oqrfk/wheels/ca/95/74/eaba58aa72c767d38ccb63383f5d1b9b0c744ad2b1dd08fe91 2024-03-06T22:56:08,511 Successfully built gctree 2024-03-06T22:56:08,516 Removed build tracker: '/tmp/pip-build-tracker-f7y5scex'