2024-03-07T18:48:25,569 Created temporary directory: /tmp/pip-build-tracker-w33w5qxc 2024-03-07T18:48:25,570 Initialized build tracking at /tmp/pip-build-tracker-w33w5qxc 2024-03-07T18:48:25,570 Created build tracker: /tmp/pip-build-tracker-w33w5qxc 2024-03-07T18:48:25,571 Entered build tracker: /tmp/pip-build-tracker-w33w5qxc 2024-03-07T18:48:25,571 Created temporary directory: /tmp/pip-wheel-6k9nlldz 2024-03-07T18:48:25,575 Created temporary directory: /tmp/pip-ephem-wheel-cache-8ixxedr2 2024-03-07T18:48:25,597 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-03-07T18:48:25,600 2 location(s) to search for versions of pub-worm: 2024-03-07T18:48:25,600 * https://pypi.org/simple/pub-worm/ 2024-03-07T18:48:25,600 * https://www.piwheels.org/simple/pub-worm/ 2024-03-07T18:48:25,601 Fetching project page and analyzing links: https://pypi.org/simple/pub-worm/ 2024-03-07T18:48:25,602 Getting page https://pypi.org/simple/pub-worm/ 2024-03-07T18:48:25,603 Found index url https://pypi.org/simple/ 2024-03-07T18:48:25,823 Fetched page https://pypi.org/simple/pub-worm/ as application/vnd.pypi.simple.v1+json 2024-03-07T18:48:25,825 Found link https://files.pythonhosted.org/packages/b8/f0/9bb3afc5b9c0aba5ffc3e0530f85826c7d472bd722f814015247c340fb9f/pub_worm-0.0.1.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.0.1 2024-03-07T18:48:25,825 Found link https://files.pythonhosted.org/packages/d8/da/df592d4da97e43ba80b8d21977686643e2fe53863198e8636d52f8385c43/pub_worm-0.1.1.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.1.1 2024-03-07T18:48:25,826 Fetching project page and analyzing links: https://www.piwheels.org/simple/pub-worm/ 2024-03-07T18:48:25,827 Getting page https://www.piwheels.org/simple/pub-worm/ 2024-03-07T18:48:25,828 Found index url https://www.piwheels.org/simple/ 2024-03-07T18:48:26,058 Fetched page https://www.piwheels.org/simple/pub-worm/ as text/html 2024-03-07T18:48:26,059 Skipping link: not a file: https://www.piwheels.org/simple/pub-worm/ 2024-03-07T18:48:26,060 Skipping link: not a file: https://pypi.org/simple/pub-worm/ 2024-03-07T18:48:26,078 Given no hashes to check 1 links for project 'pub-worm': discarding no candidates 2024-03-07T18:48:26,097 Collecting pub-worm==0.0.1 2024-03-07T18:48:26,099 Created temporary directory: /tmp/pip-unpack-h3gssytp 2024-03-07T18:48:26,355 Downloading pub_worm-0.0.1.tar.gz (380 kB) 2024-03-07T18:48:26,529 Added pub-worm==0.0.1 from https://files.pythonhosted.org/packages/b8/f0/9bb3afc5b9c0aba5ffc3e0530f85826c7d472bd722f814015247c340fb9f/pub_worm-0.0.1.tar.gz to build tracker '/tmp/pip-build-tracker-w33w5qxc' 2024-03-07T18:48:26,531 Running setup.py (path:/tmp/pip-wheel-6k9nlldz/pub-worm_d29f91d1f4884ac1a8ad87e5a37ea48f/setup.py) egg_info for package pub-worm 2024-03-07T18:48:26,532 Created temporary directory: /tmp/pip-pip-egg-info-ddh92eo4 2024-03-07T18:48:26,533 Preparing metadata (setup.py): started 2024-03-07T18:48:26,534 Running command python setup.py egg_info 2024-03-07T18:48:27,520 running egg_info 2024-03-07T18:48:27,522 creating /tmp/pip-pip-egg-info-ddh92eo4/pub_worm.egg-info 2024-03-07T18:48:27,547 writing /tmp/pip-pip-egg-info-ddh92eo4/pub_worm.egg-info/PKG-INFO 2024-03-07T18:48:27,567 writing dependency_links to /tmp/pip-pip-egg-info-ddh92eo4/pub_worm.egg-info/dependency_links.txt 2024-03-07T18:48:27,569 writing requirements to /tmp/pip-pip-egg-info-ddh92eo4/pub_worm.egg-info/requires.txt 2024-03-07T18:48:27,570 writing top-level names to /tmp/pip-pip-egg-info-ddh92eo4/pub_worm.egg-info/top_level.txt 2024-03-07T18:48:27,571 writing manifest file '/tmp/pip-pip-egg-info-ddh92eo4/pub_worm.egg-info/SOURCES.txt' 2024-03-07T18:48:27,650 reading manifest file '/tmp/pip-pip-egg-info-ddh92eo4/pub_worm.egg-info/SOURCES.txt' 2024-03-07T18:48:27,651 reading manifest template 'MANIFEST.in' 2024-03-07T18:48:27,654 writing manifest file '/tmp/pip-pip-egg-info-ddh92eo4/pub_worm.egg-info/SOURCES.txt' 2024-03-07T18:48:27,764 Preparing metadata (setup.py): finished with status 'done' 2024-03-07T18:48:27,768 Source in /tmp/pip-wheel-6k9nlldz/pub-worm_d29f91d1f4884ac1a8ad87e5a37ea48f has version 0.0.1, which satisfies requirement pub-worm==0.0.1 from https://files.pythonhosted.org/packages/b8/f0/9bb3afc5b9c0aba5ffc3e0530f85826c7d472bd722f814015247c340fb9f/pub_worm-0.0.1.tar.gz 2024-03-07T18:48:27,769 Removed pub-worm==0.0.1 from https://files.pythonhosted.org/packages/b8/f0/9bb3afc5b9c0aba5ffc3e0530f85826c7d472bd722f814015247c340fb9f/pub_worm-0.0.1.tar.gz from build tracker '/tmp/pip-build-tracker-w33w5qxc' 2024-03-07T18:48:27,773 Created temporary directory: /tmp/pip-unpack-l9kefk7y 2024-03-07T18:48:27,774 Created temporary directory: /tmp/pip-unpack-lcrhmer8 2024-03-07T18:48:27,778 Building wheels for collected packages: pub-worm 2024-03-07T18:48:27,782 Created temporary directory: /tmp/pip-wheel-oe7cb6__ 2024-03-07T18:48:27,783 Building wheel for pub-worm (setup.py): started 2024-03-07T18:48:27,784 Destination directory: /tmp/pip-wheel-oe7cb6__ 2024-03-07T18:48:27,784 Running command python setup.py bdist_wheel 2024-03-07T18:48:28,751 running bdist_wheel 2024-03-07T18:48:28,843 running build 2024-03-07T18:48:28,844 running build_py 2024-03-07T18:48:28,870 running egg_info 2024-03-07T18:48:28,923 writing pub_worm.egg-info/PKG-INFO 2024-03-07T18:48:28,926 writing dependency_links to pub_worm.egg-info/dependency_links.txt 2024-03-07T18:48:28,928 writing requirements to pub_worm.egg-info/requires.txt 2024-03-07T18:48:28,929 writing top-level names to pub_worm.egg-info/top_level.txt 2024-03-07T18:48:28,955 reading manifest file 'pub_worm.egg-info/SOURCES.txt' 2024-03-07T18:48:28,957 reading manifest template 'MANIFEST.in' 2024-03-07T18:48:28,960 writing manifest file 'pub_worm.egg-info/SOURCES.txt' 2024-03-07T18:48:28,962 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'pub_worm.impact_factor.data' is absent from the `packages` configuration. 2024-03-07T18:48:28,962 !! 2024-03-07T18:48:28,964 ******************************************************************************** 2024-03-07T18:48:28,964 ############################ 2024-03-07T18:48:28,965 # Package would be ignored # 2024-03-07T18:48:28,965 ############################ 2024-03-07T18:48:28,966 Python recognizes 'pub_worm.impact_factor.data' as an importable package[^1], 2024-03-07T18:48:28,966 but it is absent from setuptools' `packages` configuration. 2024-03-07T18:48:28,967 This leads to an ambiguous overall configuration. If you want to distribute this 2024-03-07T18:48:28,968 package, please make sure that 'pub_worm.impact_factor.data' is explicitly added 2024-03-07T18:48:28,968 to the `packages` configuration field. 2024-03-07T18:48:28,969 Alternatively, you can also rely on setuptools' discovery methods 2024-03-07T18:48:28,970 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-03-07T18:48:28,970 instead of `find_packages(...)`/`find:`). 2024-03-07T18:48:28,971 You can read more about "package discovery" on setuptools documentation page: 2024-03-07T18:48:28,972 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-03-07T18:48:28,974 If you don't want 'pub_worm.impact_factor.data' to be distributed and are 2024-03-07T18:48:28,974 already explicitly excluding 'pub_worm.impact_factor.data' via 2024-03-07T18:48:28,975 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-03-07T18:48:28,975 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-03-07T18:48:28,985 combination with a more fine grained `package-data` configuration. 2024-03-07T18:48:28,995 You can read more about "package data files" on setuptools documentation page: 2024-03-07T18:48:28,997 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-03-07T18:48:28,999 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-03-07T18:48:29,000 even if it does not contain any `.py` files. 2024-03-07T18:48:29,001 On the other hand, currently there is no concept of package data 2024-03-07T18:48:29,001 directory, all directories are treated like packages. 2024-03-07T18:48:29,002 ******************************************************************************** 2024-03-07T18:48:29,003 !! 2024-03-07T18:48:29,004 check.warn(importable) 2024-03-07T18:48:29,005 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'pub_worm.wormbase.data' is absent from the `packages` configuration. 2024-03-07T18:48:29,006 !! 2024-03-07T18:48:29,007 ******************************************************************************** 2024-03-07T18:48:29,007 ############################ 2024-03-07T18:48:29,008 # Package would be ignored # 2024-03-07T18:48:29,008 ############################ 2024-03-07T18:48:29,009 Python recognizes 'pub_worm.wormbase.data' as an importable package[^1], 2024-03-07T18:48:29,009 but it is absent from setuptools' `packages` configuration. 2024-03-07T18:48:29,010 This leads to an ambiguous overall configuration. If you want to distribute this 2024-03-07T18:48:29,011 package, please make sure that 'pub_worm.wormbase.data' is explicitly added 2024-03-07T18:48:29,011 to the `packages` configuration field. 2024-03-07T18:48:29,012 Alternatively, you can also rely on setuptools' discovery methods 2024-03-07T18:48:29,013 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-03-07T18:48:29,013 instead of `find_packages(...)`/`find:`). 2024-03-07T18:48:29,014 You can read more about "package discovery" on setuptools documentation page: 2024-03-07T18:48:29,015 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-03-07T18:48:29,017 If you don't want 'pub_worm.wormbase.data' to be distributed and are 2024-03-07T18:48:29,017 already explicitly excluding 'pub_worm.wormbase.data' via 2024-03-07T18:48:29,018 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-03-07T18:48:29,019 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-03-07T18:48:29,019 combination with a more fine grained `package-data` configuration. 2024-03-07T18:48:29,020 You can read more about "package data files" on setuptools documentation page: 2024-03-07T18:48:29,021 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-03-07T18:48:29,023 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-03-07T18:48:29,024 even if it does not contain any `.py` files. 2024-03-07T18:48:29,024 On the other hand, currently there is no concept of package data 2024-03-07T18:48:29,025 directory, all directories are treated like packages. 2024-03-07T18:48:29,025 ******************************************************************************** 2024-03-07T18:48:29,026 !! 2024-03-07T18:48:29,027 check.warn(importable) 2024-03-07T18:48:29,028 creating build 2024-03-07T18:48:29,028 creating build/lib 2024-03-07T18:48:29,029 creating build/lib/pub_worm 2024-03-07T18:48:29,029 creating build/lib/pub_worm/impact_factor 2024-03-07T18:48:29,030 creating build/lib/pub_worm/impact_factor/data 2024-03-07T18:48:29,030 copying pub_worm/impact_factor/data/2022_JCR_IF.csv -> build/lib/pub_worm/impact_factor/data 2024-03-07T18:48:29,031 creating build/lib/pub_worm/wormbase 2024-03-07T18:48:29,032 creating build/lib/pub_worm/wormbase/data 2024-03-07T18:48:29,032 copying pub_worm/wormbase/data/wormbase_field_gene.json -> build/lib/pub_worm/wormbase/data 2024-03-07T18:48:29,033 copying pub_worm/wormbase/data/wormbase_field_paper.json -> build/lib/pub_worm/wormbase/data 2024-03-07T18:48:29,033 copying pub_worm/wormbase/data/wormbase_widget_gene.json -> build/lib/pub_worm/wormbase/data 2024-03-07T18:48:29,041 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-03-07T18:48:29,041 !! 2024-03-07T18:48:29,042 ******************************************************************************** 2024-03-07T18:48:29,043 Please avoid running ``setup.py`` directly. 2024-03-07T18:48:29,043 Instead, use pypa/build, pypa/installer or other 2024-03-07T18:48:29,043 standards-based tools. 2024-03-07T18:48:29,044 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-03-07T18:48:29,045 ******************************************************************************** 2024-03-07T18:48:29,046 !! 2024-03-07T18:48:29,046 self.initialize_options() 2024-03-07T18:48:29,066 installing to build/bdist.linux-armv7l/wheel 2024-03-07T18:48:29,067 running install 2024-03-07T18:48:29,091 running install_lib 2024-03-07T18:48:29,116 creating build/bdist.linux-armv7l 2024-03-07T18:48:29,116 creating build/bdist.linux-armv7l/wheel 2024-03-07T18:48:29,118 creating build/bdist.linux-armv7l/wheel/pub_worm 2024-03-07T18:48:29,119 creating build/bdist.linux-armv7l/wheel/pub_worm/wormbase 2024-03-07T18:48:29,121 creating build/bdist.linux-armv7l/wheel/pub_worm/wormbase/data 2024-03-07T18:48:29,122 copying build/lib/pub_worm/wormbase/data/wormbase_field_paper.json -> build/bdist.linux-armv7l/wheel/pub_worm/wormbase/data 2024-03-07T18:48:29,123 copying build/lib/pub_worm/wormbase/data/wormbase_widget_gene.json -> build/bdist.linux-armv7l/wheel/pub_worm/wormbase/data 2024-03-07T18:48:29,125 copying build/lib/pub_worm/wormbase/data/wormbase_field_gene.json -> build/bdist.linux-armv7l/wheel/pub_worm/wormbase/data 2024-03-07T18:48:29,127 creating build/bdist.linux-armv7l/wheel/pub_worm/impact_factor 2024-03-07T18:48:29,129 creating build/bdist.linux-armv7l/wheel/pub_worm/impact_factor/data 2024-03-07T18:48:29,130 copying build/lib/pub_worm/impact_factor/data/2022_JCR_IF.csv -> build/bdist.linux-armv7l/wheel/pub_worm/impact_factor/data 2024-03-07T18:48:29,162 running install_egg_info 2024-03-07T18:48:29,192 Copying pub_worm.egg-info to build/bdist.linux-armv7l/wheel/pub_worm-0.0.1-py3.11.egg-info 2024-03-07T18:48:29,202 running install_scripts 2024-03-07T18:48:29,213 creating build/bdist.linux-armv7l/wheel/pub_worm-0.0.1.dist-info/WHEEL 2024-03-07T18:48:29,215 creating '/tmp/pip-wheel-oe7cb6__/pub_worm-0.0.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-03-07T18:48:29,381 adding 'pub_worm/impact_factor/data/2022_JCR_IF.csv' 2024-03-07T18:48:29,393 adding 'pub_worm/wormbase/data/wormbase_field_gene.json' 2024-03-07T18:48:29,394 adding 'pub_worm/wormbase/data/wormbase_field_paper.json' 2024-03-07T18:48:29,396 adding 'pub_worm/wormbase/data/wormbase_widget_gene.json' 2024-03-07T18:48:29,398 adding 'pub_worm-0.0.1.dist-info/METADATA' 2024-03-07T18:48:29,399 adding 'pub_worm-0.0.1.dist-info/WHEEL' 2024-03-07T18:48:29,401 adding 'pub_worm-0.0.1.dist-info/top_level.txt' 2024-03-07T18:48:29,402 adding 'pub_worm-0.0.1.dist-info/RECORD' 2024-03-07T18:48:29,407 removing build/bdist.linux-armv7l/wheel 2024-03-07T18:48:29,523 Building wheel for pub-worm (setup.py): finished with status 'done' 2024-03-07T18:48:29,529 Created wheel for pub-worm: filename=pub_worm-0.0.1-py3-none-any.whl size=381706 sha256=64fc08fd5ed29b5a07f1941f7d146f1e984af13e0587f87fc5f8c4c194bd7330 2024-03-07T18:48:29,531 Stored in directory: /tmp/pip-ephem-wheel-cache-8ixxedr2/wheels/16/a4/04/9bf630c3b86e5fc4b6137d74229adb93dbb0c33fa03f98afde 2024-03-07T18:48:29,540 Successfully built pub-worm 2024-03-07T18:48:29,557 Removed build tracker: '/tmp/pip-build-tracker-w33w5qxc'