2024-03-08T03:33:12,259 Created temporary directory: /tmp/pip-build-tracker-43eemmjc 2024-03-08T03:33:12,260 Initialized build tracking at /tmp/pip-build-tracker-43eemmjc 2024-03-08T03:33:12,261 Created build tracker: /tmp/pip-build-tracker-43eemmjc 2024-03-08T03:33:12,261 Entered build tracker: /tmp/pip-build-tracker-43eemmjc 2024-03-08T03:33:12,262 Created temporary directory: /tmp/pip-wheel-518iq9cj 2024-03-08T03:33:12,265 Created temporary directory: /tmp/pip-ephem-wheel-cache-ww823b29 2024-03-08T03:33:12,287 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-03-08T03:33:12,291 2 location(s) to search for versions of mobspy: 2024-03-08T03:33:12,291 * https://pypi.org/simple/mobspy/ 2024-03-08T03:33:12,291 * https://www.piwheels.org/simple/mobspy/ 2024-03-08T03:33:12,292 Fetching project page and analyzing links: https://pypi.org/simple/mobspy/ 2024-03-08T03:33:12,292 Getting page https://pypi.org/simple/mobspy/ 2024-03-08T03:33:12,294 Found index url https://pypi.org/simple/ 2024-03-08T03:33:12,513 Fetched page https://pypi.org/simple/mobspy/ as application/vnd.pypi.simple.v1+json 2024-03-08T03:33:12,517 Found link https://files.pythonhosted.org/packages/2f/03/165ae021d9a66bed39f8633ccca9a90d39c4b6f1f66d4da35ae3c1735018/mobspy-1.0.2.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 1.0.2 2024-03-08T03:33:12,518 Found link https://files.pythonhosted.org/packages/a4/71/dfc85103aecaeeaf86f226d8f1cd66dae1546eeff44a8182b4b8dd795f00/mobspy-1.0.3.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 1.0.3 2024-03-08T03:33:12,519 Found link https://files.pythonhosted.org/packages/29/5f/4009cc0078cb2521f37a724700a07b84dd835f1e5b172314cc34a46c5d6a/mobspy-1.0.4.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 1.0.4 2024-03-08T03:33:12,520 Found link https://files.pythonhosted.org/packages/fe/59/901ffe8a6d60395c24faa247183ecc54ebe5609824fe95184b21e6d8a197/mobspy-1.0.5.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 1.0.5 2024-03-08T03:33:12,522 Found link https://files.pythonhosted.org/packages/fc/9f/00f7c1c2fdd39b15e3177a1f5e3c9da5b1a1ce5f93503843a7daf1413a3f/mobspy-1.1.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 1.1 2024-03-08T03:33:12,523 Found link https://files.pythonhosted.org/packages/9b/40/0fd96ff71c6023c91d9634ea372a40700b441435ac2abe091f2190d93ab2/mobspy-1.1.2.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 1.1.2 2024-03-08T03:33:12,524 Found link https://files.pythonhosted.org/packages/81/43/2e0789240f94acd1b5aedd491f69dd7559f5206f0906f53c799540ee6ead/mobspy-1.1.3.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 1.1.3 2024-03-08T03:33:12,525 Found link https://files.pythonhosted.org/packages/d1/a8/f6159cb514e4430b16fab1bbe0270ec127cfb3b3603f6c84e1bc5823d75c/mobspy-2.0.1.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 2.0.1 2024-03-08T03:33:12,526 Found link https://files.pythonhosted.org/packages/ea/fc/389bb58d5e87294ec724c28456a3b9be8d59b375f90494797fec4422e4a9/mobspy-2.0.2.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 2.0.2 2024-03-08T03:33:12,527 Found link https://files.pythonhosted.org/packages/4f/19/ae2b85153a6f91cbd12f4b8ed6b0962cfc4d839f3e46f79197163d85140c/mobspy-2.0.3.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 2.0.3 2024-03-08T03:33:12,528 Found link https://files.pythonhosted.org/packages/a0/17/3f377b631bee81a8b91f8e846c63f3c421727f47cf5d0d02c85fb040453d/mobspy-2.0.4.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 2.0.4 2024-03-08T03:33:12,528 Skipping link: No binaries permitted for mobspy: https://files.pythonhosted.org/packages/f2/0a/bebf51fa671fe52c59e5d1290ab2f8946eb57232a98858c54801b141b935/mobspy-2.2.2-py3-none-any.whl (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6) 2024-03-08T03:33:12,529 Found link https://files.pythonhosted.org/packages/7b/53/d63dbeafaa50b8b31161faa261323e7d8a36792a03ac37e30ee90281b0e1/mobspy-2.2.2.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 2.2.2 2024-03-08T03:33:12,530 Skipping link: No binaries permitted for mobspy: https://files.pythonhosted.org/packages/58/d4/832663ae3a7361fb1f6bbc4bf23914b1f4273ce55048cd62927f7c1abe85/mobspy-2.3.0-py3-none-any.whl (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6) 2024-03-08T03:33:12,532 Found link https://files.pythonhosted.org/packages/ad/ae/a4435812cda248f15f71510c5d0632d3da836738c2f55d07bb06f4a822fa/mobspy-2.3.0.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 2.3.0 2024-03-08T03:33:12,532 Skipping link: No binaries permitted for mobspy: https://files.pythonhosted.org/packages/bb/78/5ef23f1ea228b9180fcfe3bcac71482c2f99f425ee862ac97a133a1d2db9/mobspy-2.3.1-py3-none-any.whl (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6) 2024-03-08T03:33:12,533 Found link https://files.pythonhosted.org/packages/ac/2c/2d1f028abd87f5a9bb5af86fd9d3677b11be527dd8615f872bae09882517/mobspy-2.3.1.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 2.3.1 2024-03-08T03:33:12,533 Skipping link: No binaries permitted for mobspy: https://files.pythonhosted.org/packages/8d/89/c8cc955c3c1d2e3cb9e6e76169d241cbee97a7dd6bd33af9ef7bcdc8abdb/mobspy-2.3.2-py3-none-any.whl (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6) 2024-03-08T03:33:12,534 Found link https://files.pythonhosted.org/packages/01/50/41f380bfb10463c55b69e8ff2b457b40325a762000c7cd71283cb950da6f/mobspy-2.3.2.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 2.3.2 2024-03-08T03:33:12,535 Fetching project page and analyzing links: https://www.piwheels.org/simple/mobspy/ 2024-03-08T03:33:12,536 Getting page https://www.piwheels.org/simple/mobspy/ 2024-03-08T03:33:12,537 Found index url https://www.piwheels.org/simple/ 2024-03-08T03:33:13,005 Fetched page https://www.piwheels.org/simple/mobspy/ as text/html 2024-03-08T03:33:13,010 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-2.3.1-py3-none-any.whl#sha256=93adf274518c44e6b998213d3747cec60877704ed3dc4ed118eb8b5a6ccc8a5e (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-03-08T03:33:13,011 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-2.3.0-py3-none-any.whl#sha256=993d22161ad2a520897d05dc69fc02a715efe8cd11928478a90659b518638bc5 (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-03-08T03:33:13,012 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-2.2.2-py3-none-any.whl#sha256=25a82b917c096ee0ffd405aa45688f10951bee3a87f043488c5bf947322576e5 (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-03-08T03:33:13,012 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-2.0.4-py3-none-any.whl#sha256=8bc9a86f6a4ca7cf5776d50edf9260aaf33a40e2a21458011a6a59a3ef42aeea (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-03-08T03:33:13,013 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-2.0.3-py3-none-any.whl#sha256=3bd344d4bced113bfa0a5e273d32c2f939295cfc1d00031e51534aacbea94410 (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-03-08T03:33:13,013 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-2.0.2-py3-none-any.whl#sha256=841b9a47734abb27e4abfd98c62bf2057765cefa42de5fdd7203f742621ed402 (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-03-08T03:33:13,014 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-2.0.1-py3-none-any.whl#sha256=f1cdde5da49569b3e9eb9da7e66d0f986ff6435eb6582e71986642c9dee46406 (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-03-08T03:33:13,014 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-1.1.3-py3-none-any.whl#sha256=f9dfd21e9baf95605b4587f404d37481d525796d74750181aaf70139e8674281 (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-03-08T03:33:13,015 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-1.1.2-py3-none-any.whl#sha256=5246e3324739c05f676c64929b6c31d17b1dda6cee4f40c5329747ddbaf8e7ae (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-03-08T03:33:13,016 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-1.1-py3-none-any.whl#sha256=0e28cf39288fac5cbab2bab2cac57499959d72a8691a9d3c54bff36d6e9b6f13 (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-03-08T03:33:13,016 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-1.0.5-py3-none-any.whl#sha256=67684ab1ac59298fbf59be47ad3dfb875c02ee79eceadd7a81c988a93db0fdca (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-03-08T03:33:13,017 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-1.0.4-py3-none-any.whl#sha256=558767d78ceef098c5b73b71062374668cb8c30af92ca0b1e1585933e16cedb9 (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-03-08T03:33:13,017 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-1.0.3-py3-none-any.whl#sha256=ed4231baa2157854447aa2cb5e8ae3607a93ac142e9a8e4b4e439bab5f79cb43 (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-03-08T03:33:13,018 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-1.0.2-py3-none-any.whl#sha256=d9200e8562ac99cd9c250a3e8c2b3a6a375d2f36288ff5073d3dd14be9bbfc68 (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-03-08T03:33:13,018 Skipping link: not a file: https://www.piwheels.org/simple/mobspy/ 2024-03-08T03:33:13,019 Skipping link: not a file: https://pypi.org/simple/mobspy/ 2024-03-08T03:33:13,039 Given no hashes to check 1 links for project 'mobspy': discarding no candidates 2024-03-08T03:33:13,057 Collecting mobspy==2.3.2 2024-03-08T03:33:13,060 Created temporary directory: /tmp/pip-unpack-pvdjptm_ 2024-03-08T03:33:13,566 Downloading mobspy-2.3.2.tar.gz (5.5 MB) 2024-03-08T03:33:15,819 Added mobspy==2.3.2 from https://files.pythonhosted.org/packages/01/50/41f380bfb10463c55b69e8ff2b457b40325a762000c7cd71283cb950da6f/mobspy-2.3.2.tar.gz to build tracker '/tmp/pip-build-tracker-43eemmjc' 2024-03-08T03:33:15,821 Running setup.py (path:/tmp/pip-wheel-518iq9cj/mobspy_d33452f7583748a9be00d6197b554c40/setup.py) egg_info for package mobspy 2024-03-08T03:33:15,822 Created temporary directory: /tmp/pip-pip-egg-info-62dqkut7 2024-03-08T03:33:15,823 Preparing metadata (setup.py): started 2024-03-08T03:33:15,824 Running command python setup.py egg_info 2024-03-08T03:33:16,545 /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:80: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2024-03-08T03:33:16,545 !! 2024-03-08T03:33:16,546 ******************************************************************************** 2024-03-08T03:33:16,547 Requirements should be satisfied by a PEP 517 installer. 2024-03-08T03:33:16,548 If you are using pip, you can try `pip install --use-pep517`. 2024-03-08T03:33:16,548 ******************************************************************************** 2024-03-08T03:33:16,549 !! 2024-03-08T03:33:16,550 dist.fetch_build_eggs(dist.setup_requires) 2024-03-08T03:33:19,926 running egg_info 2024-03-08T03:33:19,928 creating /tmp/pip-pip-egg-info-62dqkut7/mobspy.egg-info 2024-03-08T03:33:19,960 writing /tmp/pip-pip-egg-info-62dqkut7/mobspy.egg-info/PKG-INFO 2024-03-08T03:33:19,964 writing dependency_links to /tmp/pip-pip-egg-info-62dqkut7/mobspy.egg-info/dependency_links.txt 2024-03-08T03:33:19,967 writing requirements to /tmp/pip-pip-egg-info-62dqkut7/mobspy.egg-info/requires.txt 2024-03-08T03:33:19,968 writing top-level names to /tmp/pip-pip-egg-info-62dqkut7/mobspy.egg-info/top_level.txt 2024-03-08T03:33:19,970 writing manifest file '/tmp/pip-pip-egg-info-62dqkut7/mobspy.egg-info/SOURCES.txt' 2024-03-08T03:33:20,193 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-03-08T03:33:20,202 reading manifest file '/tmp/pip-pip-egg-info-62dqkut7/mobspy.egg-info/SOURCES.txt' 2024-03-08T03:33:20,204 adding license file 'LICENSE' 2024-03-08T03:33:20,207 writing manifest file '/tmp/pip-pip-egg-info-62dqkut7/mobspy.egg-info/SOURCES.txt' 2024-03-08T03:33:20,419 Preparing metadata (setup.py): finished with status 'done' 2024-03-08T03:33:20,492 Source in /tmp/pip-wheel-518iq9cj/mobspy_d33452f7583748a9be00d6197b554c40 has version 2.3.2, which satisfies requirement mobspy==2.3.2 from https://files.pythonhosted.org/packages/01/50/41f380bfb10463c55b69e8ff2b457b40325a762000c7cd71283cb950da6f/mobspy-2.3.2.tar.gz 2024-03-08T03:33:20,498 Removed mobspy==2.3.2 from https://files.pythonhosted.org/packages/01/50/41f380bfb10463c55b69e8ff2b457b40325a762000c7cd71283cb950da6f/mobspy-2.3.2.tar.gz from build tracker '/tmp/pip-build-tracker-43eemmjc' 2024-03-08T03:33:20,515 Created temporary directory: /tmp/pip-unpack-l3hrgqsn 2024-03-08T03:33:20,517 Created temporary directory: /tmp/pip-unpack-fzuww3fs 2024-03-08T03:33:20,539 Building wheels for collected packages: mobspy 2024-03-08T03:33:20,765 Created temporary directory: /tmp/pip-wheel-sa9lkd_2 2024-03-08T03:33:20,767 Building wheel for mobspy (setup.py): started 2024-03-08T03:33:20,788 Destination directory: /tmp/pip-wheel-sa9lkd_2 2024-03-08T03:33:20,789 Running command python setup.py bdist_wheel 2024-03-08T03:33:22,938 /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:80: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2024-03-08T03:33:22,938 !! 2024-03-08T03:33:22,939 ******************************************************************************** 2024-03-08T03:33:22,940 Requirements should be satisfied by a PEP 517 installer. 2024-03-08T03:33:22,941 If you are using pip, you can try `pip install --use-pep517`. 2024-03-08T03:33:22,942 ******************************************************************************** 2024-03-08T03:33:22,943 !! 2024-03-08T03:33:22,944 dist.fetch_build_eggs(dist.setup_requires) 2024-03-08T03:33:23,671 running bdist_wheel 2024-03-08T03:33:23,795 running build 2024-03-08T03:33:23,797 running build_py 2024-03-08T03:33:23,830 creating build 2024-03-08T03:33:23,830 creating build/lib 2024-03-08T03:33:23,831 creating build/lib/mobspy 2024-03-08T03:33:23,833 copying mobspy/__init__.py -> build/lib/mobspy 2024-03-08T03:33:23,835 copying mobspy/_version.py -> build/lib/mobspy 2024-03-08T03:33:23,837 copying mobspy/simulation.py -> build/lib/mobspy 2024-03-08T03:33:23,841 creating build/lib/mobspy/modules 2024-03-08T03:33:23,842 copying mobspy/modules/reaction_construction_nb_parallel.py -> build/lib/mobspy/modules 2024-03-08T03:33:23,845 copying mobspy/modules/__init__.py -> build/lib/mobspy/modules 2024-03-08T03:33:23,847 copying mobspy/modules/class_of_meta_specie_named_any.py -> build/lib/mobspy/modules 2024-03-08T03:33:23,849 copying mobspy/modules/reaction_construction_nb.py -> build/lib/mobspy/modules 2024-03-08T03:33:23,852 copying mobspy/modules/unit_handler.py -> build/lib/mobspy/modules 2024-03-08T03:33:23,855 copying mobspy/modules/user_functions.py -> build/lib/mobspy/modules 2024-03-08T03:33:23,857 copying mobspy/modules/context_related_scripts.py -> build/lib/mobspy/modules 2024-03-08T03:33:23,860 copying mobspy/modules/logic_operator_objects.py -> build/lib/mobspy/modules 2024-03-08T03:33:23,863 copying mobspy/modules/order_operators.py -> build/lib/mobspy/modules 2024-03-08T03:33:23,866 copying mobspy/modules/meta_class.py -> build/lib/mobspy/modules 2024-03-08T03:33:23,870 copying mobspy/modules/set_counts_module.py -> build/lib/mobspy/modules 2024-03-08T03:33:23,873 copying mobspy/modules/function_rate_code.py -> build/lib/mobspy/modules 2024-03-08T03:33:23,876 copying mobspy/modules/mobspy_expressions.py -> build/lib/mobspy/modules 2024-03-08T03:33:23,881 copying mobspy/modules/mobspy_parameters.py -> build/lib/mobspy/modules 2024-03-08T03:33:23,883 copying mobspy/modules/meta_class_utils.py -> build/lib/mobspy/modules 2024-03-08T03:33:23,885 copying mobspy/modules/event_functions.py -> build/lib/mobspy/modules 2024-03-08T03:33:23,888 copying mobspy/modules/species_string_generator.py -> build/lib/mobspy/modules 2024-03-08T03:33:23,891 creating build/lib/mobspy/plot_params 2024-03-08T03:33:23,892 copying mobspy/plot_params/default_plot_reader.py -> build/lib/mobspy/plot_params 2024-03-08T03:33:23,894 copying mobspy/plot_params/__init__.py -> build/lib/mobspy/plot_params 2024-03-08T03:33:23,896 copying mobspy/plot_params/example_plot_reader.py -> build/lib/mobspy/plot_params 2024-03-08T03:33:23,898 creating build/lib/mobspy/plot_scripts 2024-03-08T03:33:23,899 copying mobspy/plot_scripts/__init__.py -> build/lib/mobspy/plot_scripts 2024-03-08T03:33:23,901 copying mobspy/plot_scripts/hierarchical_plot.py -> build/lib/mobspy/plot_scripts 2024-03-08T03:33:23,904 copying mobspy/plot_scripts/process_plot_data.py -> build/lib/mobspy/plot_scripts 2024-03-08T03:33:23,906 copying mobspy/plot_scripts/statistics_calculations.py -> build/lib/mobspy/plot_scripts 2024-03-08T03:33:23,908 copying mobspy/plot_scripts/default_plots.py -> build/lib/mobspy/plot_scripts 2024-03-08T03:33:23,911 creating build/lib/mobspy/parameter_estimation_data_loader 2024-03-08T03:33:23,912 copying mobspy/parameter_estimation_data_loader/__init__.py -> build/lib/mobspy/parameter_estimation_data_loader 2024-03-08T03:33:23,914 copying mobspy/parameter_estimation_data_loader/parameter_estimation_scripts.py -> build/lib/mobspy/parameter_estimation_data_loader 2024-03-08T03:33:23,917 copying mobspy/parameter_estimation_data_loader/data_loader.py -> build/lib/mobspy/parameter_estimation_data_loader 2024-03-08T03:33:23,919 creating build/lib/mobspy/parameters 2024-03-08T03:33:23,920 copying mobspy/parameters/__init__.py -> build/lib/mobspy/parameters 2024-03-08T03:33:23,922 copying mobspy/parameters/example_reader.py -> build/lib/mobspy/parameters 2024-03-08T03:33:23,924 copying mobspy/parameters/default_reader.py -> build/lib/mobspy/parameters 2024-03-08T03:33:23,927 creating build/lib/mobspy/sbml_simulator 2024-03-08T03:33:23,928 copying mobspy/sbml_simulator/SBMLWriter.py -> build/lib/mobspy/sbml_simulator 2024-03-08T03:33:23,931 copying mobspy/sbml_simulator/__init__.py -> build/lib/mobspy/sbml_simulator 2024-03-08T03:33:23,936 copying mobspy/sbml_simulator/builder.py -> build/lib/mobspy/sbml_simulator 2024-03-08T03:33:23,938 copying mobspy/sbml_simulator/run.py -> build/lib/mobspy/sbml_simulator 2024-03-08T03:33:23,942 creating build/lib/mobspy/simulation_logging 2024-03-08T03:33:23,943 copying mobspy/simulation_logging/__init__.py -> build/lib/mobspy/simulation_logging 2024-03-08T03:33:23,945 copying mobspy/simulation_logging/log_scripts.py -> build/lib/mobspy/simulation_logging 2024-03-08T03:33:23,948 creating build/lib/mobspy/data_handler 2024-03-08T03:33:23,949 copying mobspy/data_handler/process_result_data.py -> build/lib/mobspy/data_handler 2024-03-08T03:33:23,952 copying mobspy/data_handler/__init__.py -> build/lib/mobspy/data_handler 2024-03-08T03:33:23,954 copying mobspy/data_handler/time_series_object.py -> build/lib/mobspy/data_handler 2024-03-08T03:33:23,957 creating build/lib/mobspy/parameter_scripts 2024-03-08T03:33:23,958 copying mobspy/parameter_scripts/parameter_reader.py -> build/lib/mobspy/parameter_scripts 2024-03-08T03:33:23,961 copying mobspy/parameter_scripts/__init__.py -> build/lib/mobspy/parameter_scripts 2024-03-08T03:33:23,963 copying mobspy/parameter_scripts/parametric_sweeps.py -> build/lib/mobspy/parameter_scripts 2024-03-08T03:33:24,010 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-03-08T03:33:24,011 !! 2024-03-08T03:33:24,013 ******************************************************************************** 2024-03-08T03:33:24,014 Please avoid running ``setup.py`` directly. 2024-03-08T03:33:24,015 Instead, use pypa/build, pypa/installer or other 2024-03-08T03:33:24,016 standards-based tools. 2024-03-08T03:33:24,017 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-03-08T03:33:24,018 ******************************************************************************** 2024-03-08T03:33:24,020 !! 2024-03-08T03:33:24,021 self.initialize_options() 2024-03-08T03:33:24,045 installing to build/bdist.linux-armv7l/wheel 2024-03-08T03:33:24,046 running install 2024-03-08T03:33:24,070 running install_lib 2024-03-08T03:33:24,097 creating build/bdist.linux-armv7l 2024-03-08T03:33:24,098 creating build/bdist.linux-armv7l/wheel 2024-03-08T03:33:24,101 creating build/bdist.linux-armv7l/wheel/mobspy 2024-03-08T03:33:24,103 creating build/bdist.linux-armv7l/wheel/mobspy/modules 2024-03-08T03:33:24,104 copying build/lib/mobspy/modules/reaction_construction_nb_parallel.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-03-08T03:33:24,107 copying build/lib/mobspy/modules/__init__.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-03-08T03:33:24,109 copying build/lib/mobspy/modules/class_of_meta_specie_named_any.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-03-08T03:33:24,111 copying build/lib/mobspy/modules/reaction_construction_nb.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-03-08T03:33:24,114 copying build/lib/mobspy/modules/unit_handler.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-03-08T03:33:24,117 copying build/lib/mobspy/modules/user_functions.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-03-08T03:33:24,119 copying build/lib/mobspy/modules/context_related_scripts.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-03-08T03:33:24,121 copying build/lib/mobspy/modules/logic_operator_objects.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-03-08T03:33:24,124 copying build/lib/mobspy/modules/order_operators.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-03-08T03:33:24,127 copying build/lib/mobspy/modules/meta_class.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-03-08T03:33:24,135 copying build/lib/mobspy/modules/set_counts_module.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-03-08T03:33:24,138 copying build/lib/mobspy/modules/function_rate_code.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-03-08T03:33:24,141 copying build/lib/mobspy/modules/mobspy_expressions.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-03-08T03:33:24,145 copying build/lib/mobspy/modules/mobspy_parameters.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-03-08T03:33:24,149 copying build/lib/mobspy/modules/meta_class_utils.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-03-08T03:33:24,152 copying build/lib/mobspy/modules/event_functions.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-03-08T03:33:24,154 copying build/lib/mobspy/modules/species_string_generator.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-03-08T03:33:24,157 copying build/lib/mobspy/__init__.py -> build/bdist.linux-armv7l/wheel/mobspy 2024-03-08T03:33:24,159 copying build/lib/mobspy/_version.py -> build/bdist.linux-armv7l/wheel/mobspy 2024-03-08T03:33:24,161 creating build/bdist.linux-armv7l/wheel/mobspy/plot_params 2024-03-08T03:33:24,162 copying build/lib/mobspy/plot_params/default_plot_reader.py -> build/bdist.linux-armv7l/wheel/mobspy/plot_params 2024-03-08T03:33:24,164 copying build/lib/mobspy/plot_params/__init__.py -> build/bdist.linux-armv7l/wheel/mobspy/plot_params 2024-03-08T03:33:24,166 copying build/lib/mobspy/plot_params/example_plot_reader.py -> build/bdist.linux-armv7l/wheel/mobspy/plot_params 2024-03-08T03:33:24,169 creating build/bdist.linux-armv7l/wheel/mobspy/plot_scripts 2024-03-08T03:33:24,170 copying build/lib/mobspy/plot_scripts/__init__.py -> build/bdist.linux-armv7l/wheel/mobspy/plot_scripts 2024-03-08T03:33:24,172 copying build/lib/mobspy/plot_scripts/hierarchical_plot.py -> build/bdist.linux-armv7l/wheel/mobspy/plot_scripts 2024-03-08T03:33:24,175 copying build/lib/mobspy/plot_scripts/process_plot_data.py -> build/bdist.linux-armv7l/wheel/mobspy/plot_scripts 2024-03-08T03:33:24,177 copying build/lib/mobspy/plot_scripts/statistics_calculations.py -> build/bdist.linux-armv7l/wheel/mobspy/plot_scripts 2024-03-08T03:33:24,180 copying build/lib/mobspy/plot_scripts/default_plots.py -> build/bdist.linux-armv7l/wheel/mobspy/plot_scripts 2024-03-08T03:33:24,183 creating build/bdist.linux-armv7l/wheel/mobspy/parameter_estimation_data_loader 2024-03-08T03:33:24,184 copying build/lib/mobspy/parameter_estimation_data_loader/__init__.py -> build/bdist.linux-armv7l/wheel/mobspy/parameter_estimation_data_loader 2024-03-08T03:33:24,186 copying build/lib/mobspy/parameter_estimation_data_loader/parameter_estimation_scripts.py -> build/bdist.linux-armv7l/wheel/mobspy/parameter_estimation_data_loader 2024-03-08T03:33:24,191 copying build/lib/mobspy/parameter_estimation_data_loader/data_loader.py -> build/bdist.linux-armv7l/wheel/mobspy/parameter_estimation_data_loader 2024-03-08T03:33:24,195 creating build/bdist.linux-armv7l/wheel/mobspy/parameters 2024-03-08T03:33:24,196 copying build/lib/mobspy/parameters/__init__.py -> build/bdist.linux-armv7l/wheel/mobspy/parameters 2024-03-08T03:33:24,198 copying build/lib/mobspy/parameters/example_reader.py -> build/bdist.linux-armv7l/wheel/mobspy/parameters 2024-03-08T03:33:24,200 copying build/lib/mobspy/parameters/default_reader.py -> build/bdist.linux-armv7l/wheel/mobspy/parameters 2024-03-08T03:33:24,203 creating build/bdist.linux-armv7l/wheel/mobspy/sbml_simulator 2024-03-08T03:33:24,204 copying build/lib/mobspy/sbml_simulator/SBMLWriter.py -> build/bdist.linux-armv7l/wheel/mobspy/sbml_simulator 2024-03-08T03:33:24,207 copying build/lib/mobspy/sbml_simulator/__init__.py -> build/bdist.linux-armv7l/wheel/mobspy/sbml_simulator 2024-03-08T03:33:24,209 copying build/lib/mobspy/sbml_simulator/builder.py -> build/bdist.linux-armv7l/wheel/mobspy/sbml_simulator 2024-03-08T03:33:24,211 copying build/lib/mobspy/sbml_simulator/run.py -> build/bdist.linux-armv7l/wheel/mobspy/sbml_simulator 2024-03-08T03:33:24,214 creating build/bdist.linux-armv7l/wheel/mobspy/simulation_logging 2024-03-08T03:33:24,216 copying build/lib/mobspy/simulation_logging/__init__.py -> build/bdist.linux-armv7l/wheel/mobspy/simulation_logging 2024-03-08T03:33:24,218 copying build/lib/mobspy/simulation_logging/log_scripts.py -> build/bdist.linux-armv7l/wheel/mobspy/simulation_logging 2024-03-08T03:33:24,221 creating build/bdist.linux-armv7l/wheel/mobspy/data_handler 2024-03-08T03:33:24,222 copying build/lib/mobspy/data_handler/process_result_data.py -> build/bdist.linux-armv7l/wheel/mobspy/data_handler 2024-03-08T03:33:24,226 copying build/lib/mobspy/data_handler/__init__.py -> build/bdist.linux-armv7l/wheel/mobspy/data_handler 2024-03-08T03:33:24,228 copying build/lib/mobspy/data_handler/time_series_object.py -> build/bdist.linux-armv7l/wheel/mobspy/data_handler 2024-03-08T03:33:24,232 creating build/bdist.linux-armv7l/wheel/mobspy/parameter_scripts 2024-03-08T03:33:24,234 copying build/lib/mobspy/parameter_scripts/parameter_reader.py -> build/bdist.linux-armv7l/wheel/mobspy/parameter_scripts 2024-03-08T03:33:24,237 copying build/lib/mobspy/parameter_scripts/__init__.py -> build/bdist.linux-armv7l/wheel/mobspy/parameter_scripts 2024-03-08T03:33:24,239 copying build/lib/mobspy/parameter_scripts/parametric_sweeps.py -> build/bdist.linux-armv7l/wheel/mobspy/parameter_scripts 2024-03-08T03:33:24,242 copying build/lib/mobspy/simulation.py -> build/bdist.linux-armv7l/wheel/mobspy 2024-03-08T03:33:24,245 running install_egg_info 2024-03-08T03:33:24,303 running egg_info 2024-03-08T03:33:24,331 writing mobspy.egg-info/PKG-INFO 2024-03-08T03:33:24,337 writing dependency_links to mobspy.egg-info/dependency_links.txt 2024-03-08T03:33:24,339 writing requirements to mobspy.egg-info/requires.txt 2024-03-08T03:33:24,341 writing top-level names to mobspy.egg-info/top_level.txt 2024-03-08T03:33:24,442 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-03-08T03:33:24,446 reading manifest file 'mobspy.egg-info/SOURCES.txt' 2024-03-08T03:33:24,505 adding license file 'LICENSE' 2024-03-08T03:33:24,518 writing manifest file 'mobspy.egg-info/SOURCES.txt' 2024-03-08T03:33:24,521 Copying mobspy.egg-info to build/bdist.linux-armv7l/wheel/mobspy-2.3.2-py3.11.egg-info 2024-03-08T03:33:24,533 running install_scripts 2024-03-08T03:33:24,549 creating build/bdist.linux-armv7l/wheel/mobspy-2.3.2.dist-info/WHEEL 2024-03-08T03:33:24,552 creating '/tmp/pip-wheel-sa9lkd_2/mobspy-2.3.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-03-08T03:33:24,554 adding 'mobspy/__init__.py' 2024-03-08T03:33:24,555 adding 'mobspy/_version.py' 2024-03-08T03:33:24,560 adding 'mobspy/simulation.py' 2024-03-08T03:33:24,562 adding 'mobspy/data_handler/__init__.py' 2024-03-08T03:33:24,564 adding 'mobspy/data_handler/process_result_data.py' 2024-03-08T03:33:24,566 adding 'mobspy/data_handler/time_series_object.py' 2024-03-08T03:33:24,569 adding 'mobspy/modules/__init__.py' 2024-03-08T03:33:24,572 adding 'mobspy/modules/class_of_meta_specie_named_any.py' 2024-03-08T03:33:24,574 adding 'mobspy/modules/context_related_scripts.py' 2024-03-08T03:33:24,577 adding 'mobspy/modules/event_functions.py' 2024-03-08T03:33:24,580 adding 'mobspy/modules/function_rate_code.py' 2024-03-08T03:33:24,583 adding 'mobspy/modules/logic_operator_objects.py' 2024-03-08T03:33:24,591 adding 'mobspy/modules/meta_class.py' 2024-03-08T03:33:24,593 adding 'mobspy/modules/meta_class_utils.py' 2024-03-08T03:33:24,598 adding 'mobspy/modules/mobspy_expressions.py' 2024-03-08T03:33:24,600 adding 'mobspy/modules/mobspy_parameters.py' 2024-03-08T03:33:24,603 adding 'mobspy/modules/order_operators.py' 2024-03-08T03:33:24,605 adding 'mobspy/modules/reaction_construction_nb.py' 2024-03-08T03:33:24,608 adding 'mobspy/modules/reaction_construction_nb_parallel.py' 2024-03-08T03:33:24,609 adding 'mobspy/modules/set_counts_module.py' 2024-03-08T03:33:24,611 adding 'mobspy/modules/species_string_generator.py' 2024-03-08T03:33:24,613 adding 'mobspy/modules/unit_handler.py' 2024-03-08T03:33:24,614 adding 'mobspy/modules/user_functions.py' 2024-03-08T03:33:24,616 adding 'mobspy/parameter_estimation_data_loader/__init__.py' 2024-03-08T03:33:24,618 adding 'mobspy/parameter_estimation_data_loader/data_loader.py' 2024-03-08T03:33:24,619 adding 'mobspy/parameter_estimation_data_loader/parameter_estimation_scripts.py' 2024-03-08T03:33:24,622 adding 'mobspy/parameter_scripts/__init__.py' 2024-03-08T03:33:24,624 adding 'mobspy/parameter_scripts/parameter_reader.py' 2024-03-08T03:33:24,626 adding 'mobspy/parameter_scripts/parametric_sweeps.py' 2024-03-08T03:33:24,628 adding 'mobspy/parameters/__init__.py' 2024-03-08T03:33:24,629 adding 'mobspy/parameters/default_reader.py' 2024-03-08T03:33:24,631 adding 'mobspy/parameters/example_reader.py' 2024-03-08T03:33:24,633 adding 'mobspy/plot_params/__init__.py' 2024-03-08T03:33:24,635 adding 'mobspy/plot_params/default_plot_reader.py' 2024-03-08T03:33:24,682 adding 'mobspy/plot_params/example_plot_reader.py' 2024-03-08T03:33:24,683 adding 'mobspy/plot_scripts/__init__.py' 2024-03-08T03:33:24,685 adding 'mobspy/plot_scripts/default_plots.py' 2024-03-08T03:33:24,687 adding 'mobspy/plot_scripts/hierarchical_plot.py' 2024-03-08T03:33:24,689 adding 'mobspy/plot_scripts/process_plot_data.py' 2024-03-08T03:33:24,690 adding 'mobspy/plot_scripts/statistics_calculations.py' 2024-03-08T03:33:24,693 adding 'mobspy/sbml_simulator/SBMLWriter.py' 2024-03-08T03:33:24,693 adding 'mobspy/sbml_simulator/__init__.py' 2024-03-08T03:33:24,695 adding 'mobspy/sbml_simulator/builder.py' 2024-03-08T03:33:24,697 adding 'mobspy/sbml_simulator/run.py' 2024-03-08T03:33:24,699 adding 'mobspy/simulation_logging/__init__.py' 2024-03-08T03:33:24,700 adding 'mobspy/simulation_logging/log_scripts.py' 2024-03-08T03:33:24,702 adding 'mobspy-2.3.2.dist-info/LICENSE' 2024-03-08T03:33:24,704 adding 'mobspy-2.3.2.dist-info/METADATA' 2024-03-08T03:33:24,705 adding 'mobspy-2.3.2.dist-info/WHEEL' 2024-03-08T03:33:24,706 adding 'mobspy-2.3.2.dist-info/top_level.txt' 2024-03-08T03:33:24,707 adding 'mobspy-2.3.2.dist-info/RECORD' 2024-03-08T03:33:24,710 removing build/bdist.linux-armv7l/wheel 2024-03-08T03:33:24,846 Building wheel for mobspy (setup.py): finished with status 'done' 2024-03-08T03:33:24,850 Created wheel for mobspy: filename=mobspy-2.3.2-py3-none-any.whl size=95790 sha256=ce4c2e39eb28ca7f3a207f99776c6f5e5d1ccbf145668ffef052cbb2675fbfe2 2024-03-08T03:33:24,851 Stored in directory: /tmp/pip-ephem-wheel-cache-ww823b29/wheels/40/7c/97/389f9de1f188e59cf630946f86ace99728bd61ffa333e51f4a 2024-03-08T03:33:24,864 Successfully built mobspy 2024-03-08T03:33:24,871 Removed build tracker: '/tmp/pip-build-tracker-43eemmjc'