2024-03-08T21:52:16,918 Created temporary directory: /tmp/pip-build-tracker-ibwhobog 2024-03-08T21:52:16,919 Initialized build tracking at /tmp/pip-build-tracker-ibwhobog 2024-03-08T21:52:16,920 Created build tracker: /tmp/pip-build-tracker-ibwhobog 2024-03-08T21:52:16,920 Entered build tracker: /tmp/pip-build-tracker-ibwhobog 2024-03-08T21:52:16,921 Created temporary directory: /tmp/pip-wheel-f0g8r9ir 2024-03-08T21:52:16,924 Created temporary directory: /tmp/pip-ephem-wheel-cache-snjnym9s 2024-03-08T21:52:16,947 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-03-08T21:52:16,951 2 location(s) to search for versions of biostoch: 2024-03-08T21:52:16,951 * https://pypi.org/simple/biostoch/ 2024-03-08T21:52:16,951 * https://www.piwheels.org/simple/biostoch/ 2024-03-08T21:52:16,952 Fetching project page and analyzing links: https://pypi.org/simple/biostoch/ 2024-03-08T21:52:16,953 Getting page https://pypi.org/simple/biostoch/ 2024-03-08T21:52:16,954 Found index url https://pypi.org/simple/ 2024-03-08T21:52:17,095 Fetched page https://pypi.org/simple/biostoch/ as application/vnd.pypi.simple.v1+json 2024-03-08T21:52:17,098 Skipping link: No binaries permitted for biostoch: https://files.pythonhosted.org/packages/d4/6b/15f74c07205ef7d82d679617816430d3f08c0ac2349a12d0aec83a1af532/BioStoch-0.0.1-py3-none-any.whl (from https://pypi.org/simple/biostoch/) 2024-03-08T21:52:17,098 Found link https://files.pythonhosted.org/packages/bd/10/cccb1779898ee3fabe47b5c3873d41704f8eb0c2768248bbaa7519ae1ff4/BioStoch-0.0.1.tar.gz (from https://pypi.org/simple/biostoch/), version: 0.0.1 2024-03-08T21:52:17,099 Skipping link: No binaries permitted for biostoch: https://files.pythonhosted.org/packages/ca/8e/2cf3a1fed2f71feb387ee096212565f5c23db60d31a10d6fbab3738f616a/biostoch-0.0.2-py3-none-any.whl (from https://pypi.org/simple/biostoch/) 2024-03-08T21:52:17,100 Found link https://files.pythonhosted.org/packages/23/83/dc73d701e3210f6cc850b5da286e2a5ff4cba49e431d39b7be1687cd6646/biostoch-0.0.2.tar.gz (from https://pypi.org/simple/biostoch/), version: 0.0.2 2024-03-08T21:52:17,100 Skipping link: No binaries permitted for biostoch: https://files.pythonhosted.org/packages/23/29/b221e963dd5d9525e53c63a384ddb0d67fc83f6b9dc9f7e381793c0adf94/biostoch-0.0.3-py3-none-any.whl (from https://pypi.org/simple/biostoch/) 2024-03-08T21:52:17,101 Found link https://files.pythonhosted.org/packages/19/7f/9a4b0e60ff44dfaf136cd9f2ac443085070b0e4c456f21c0eb4857e294ad/biostoch-0.0.3.tar.gz (from https://pypi.org/simple/biostoch/), version: 0.0.3 2024-03-08T21:52:17,102 Skipping link: No binaries permitted for biostoch: https://files.pythonhosted.org/packages/d0/de/47248a42eebf0495defc69a8ee5502841bca9d00f7b06db875ab134aaae0/biostoch-0.0.4-py3-none-any.whl (from https://pypi.org/simple/biostoch/) 2024-03-08T21:52:17,102 Found link https://files.pythonhosted.org/packages/a8/ff/4c1484d48476bff0fb1ac63bd2422e00430655ea853bb3e6d0a2f3a250e4/biostoch-0.0.4.tar.gz (from https://pypi.org/simple/biostoch/), version: 0.0.4 2024-03-08T21:52:17,103 Skipping link: No binaries permitted for biostoch: https://files.pythonhosted.org/packages/0a/e6/b3edf6084c0903d83357a62f75a2f6c49a2fba0f34da1fb52933f71e77c0/biostoch-0.0.5-py3-none-any.whl (from https://pypi.org/simple/biostoch/) 2024-03-08T21:52:17,103 Found link https://files.pythonhosted.org/packages/43/19/ff63b4348ec5ca3af670bd1a7c9d45c202b66ab47b0866eb59aa0e657980/biostoch-0.0.5.tar.gz (from https://pypi.org/simple/biostoch/), version: 0.0.5 2024-03-08T21:52:17,104 Fetching project page and analyzing links: https://www.piwheels.org/simple/biostoch/ 2024-03-08T21:52:17,105 Getting page https://www.piwheels.org/simple/biostoch/ 2024-03-08T21:52:17,106 Found index url https://www.piwheels.org/simple/ 2024-03-08T21:52:17,370 Fetched page https://www.piwheels.org/simple/biostoch/ as text/html 2024-03-08T21:52:17,372 Skipping link: No binaries permitted for biostoch: https://www.piwheels.org/simple/biostoch/biostoch-0.0.4-py3-none-any.whl#sha256=afb95586d36dd9af701d5f9bc99adc8fb07684349210596c87767589d3e08a19 (from https://www.piwheels.org/simple/biostoch/) 2024-03-08T21:52:17,373 Skipping link: No binaries permitted for biostoch: https://www.piwheels.org/simple/biostoch/biostoch-0.0.3-py3-none-any.whl#sha256=3b189b2f50991a63ec94dbcc0f89c93ede46de90a2c169bc4b7d28b6ef39a75a (from https://www.piwheels.org/simple/biostoch/) 2024-03-08T21:52:17,374 Skipping link: No binaries permitted for biostoch: https://www.piwheels.org/simple/biostoch/biostoch-0.0.2-py3-none-any.whl#sha256=a9f33a40949a911088beab084697ddcda74a7f7d49d10d928d06d37eff16ceb4 (from https://www.piwheels.org/simple/biostoch/) 2024-03-08T21:52:17,374 Skipping link: No binaries permitted for biostoch: https://www.piwheels.org/simple/biostoch/BioStoch-0.0.1-py3-none-any.whl#sha256=98495e596ff47e9cc21925b3db289743a32259b0ab02fd6f49dce2593b70a2c2 (from https://www.piwheels.org/simple/biostoch/) 2024-03-08T21:52:17,375 Skipping link: not a file: https://www.piwheels.org/simple/biostoch/ 2024-03-08T21:52:17,375 Skipping link: not a file: https://pypi.org/simple/biostoch/ 2024-03-08T21:52:17,394 Given no hashes to check 1 links for project 'biostoch': discarding no candidates 2024-03-08T21:52:17,412 Collecting biostoch==0.0.5 2024-03-08T21:52:17,414 Created temporary directory: /tmp/pip-unpack-i_qtevhr 2024-03-08T21:52:17,630 Downloading biostoch-0.0.5.tar.gz (12 kB) 2024-03-08T21:52:17,910 Added biostoch==0.0.5 from https://files.pythonhosted.org/packages/43/19/ff63b4348ec5ca3af670bd1a7c9d45c202b66ab47b0866eb59aa0e657980/biostoch-0.0.5.tar.gz to build tracker '/tmp/pip-build-tracker-ibwhobog' 2024-03-08T21:52:17,912 Running setup.py (path:/tmp/pip-wheel-f0g8r9ir/biostoch_bb31786457424250937e29feb035d4c6/setup.py) egg_info for package biostoch 2024-03-08T21:52:17,913 Created temporary directory: /tmp/pip-pip-egg-info-ozsrkjem 2024-03-08T21:52:17,913 Preparing metadata (setup.py): started 2024-03-08T21:52:17,915 Running command python setup.py egg_info 2024-03-08T21:52:19,020 running egg_info 2024-03-08T21:52:19,021 creating /tmp/pip-pip-egg-info-ozsrkjem/biostoch.egg-info 2024-03-08T21:52:19,047 writing /tmp/pip-pip-egg-info-ozsrkjem/biostoch.egg-info/PKG-INFO 2024-03-08T21:52:19,050 writing dependency_links to /tmp/pip-pip-egg-info-ozsrkjem/biostoch.egg-info/dependency_links.txt 2024-03-08T21:52:19,053 writing requirements to /tmp/pip-pip-egg-info-ozsrkjem/biostoch.egg-info/requires.txt 2024-03-08T21:52:19,054 writing top-level names to /tmp/pip-pip-egg-info-ozsrkjem/biostoch.egg-info/top_level.txt 2024-03-08T21:52:19,055 writing manifest file '/tmp/pip-pip-egg-info-ozsrkjem/biostoch.egg-info/SOURCES.txt' 2024-03-08T21:52:19,132 reading manifest file '/tmp/pip-pip-egg-info-ozsrkjem/biostoch.egg-info/SOURCES.txt' 2024-03-08T21:52:19,133 reading manifest template 'MANIFEST.in' 2024-03-08T21:52:19,138 adding license file 'LICENSE' 2024-03-08T21:52:19,140 writing manifest file '/tmp/pip-pip-egg-info-ozsrkjem/biostoch.egg-info/SOURCES.txt' 2024-03-08T21:52:19,249 Preparing metadata (setup.py): finished with status 'done' 2024-03-08T21:52:19,253 Source in /tmp/pip-wheel-f0g8r9ir/biostoch_bb31786457424250937e29feb035d4c6 has version 0.0.5, which satisfies requirement biostoch==0.0.5 from https://files.pythonhosted.org/packages/43/19/ff63b4348ec5ca3af670bd1a7c9d45c202b66ab47b0866eb59aa0e657980/biostoch-0.0.5.tar.gz 2024-03-08T21:52:19,254 Removed biostoch==0.0.5 from https://files.pythonhosted.org/packages/43/19/ff63b4348ec5ca3af670bd1a7c9d45c202b66ab47b0866eb59aa0e657980/biostoch-0.0.5.tar.gz from build tracker '/tmp/pip-build-tracker-ibwhobog' 2024-03-08T21:52:19,259 Created temporary directory: /tmp/pip-unpack-t_kxbjbf 2024-03-08T21:52:19,260 Created temporary directory: /tmp/pip-unpack-cpdrw6ax 2024-03-08T21:52:19,265 Building wheels for collected packages: biostoch 2024-03-08T21:52:19,270 Created temporary directory: /tmp/pip-wheel-yk90gx2m 2024-03-08T21:52:19,271 Building wheel for biostoch (setup.py): started 2024-03-08T21:52:19,272 Destination directory: /tmp/pip-wheel-yk90gx2m 2024-03-08T21:52:19,273 Running command python setup.py bdist_wheel 2024-03-08T21:52:20,355 running bdist_wheel 2024-03-08T21:52:20,452 running build 2024-03-08T21:52:20,453 running build_py 2024-03-08T21:52:20,481 creating build 2024-03-08T21:52:20,482 creating build/lib 2024-03-08T21:52:20,483 creating build/lib/biostoch 2024-03-08T21:52:20,484 copying biostoch/ssa.py -> build/lib/biostoch 2024-03-08T21:52:20,487 copying biostoch/tau_leaping.py -> build/lib/biostoch 2024-03-08T21:52:20,490 copying biostoch/cle.py -> build/lib/biostoch 2024-03-08T21:52:20,493 copying biostoch/__init__.py -> build/lib/biostoch 2024-03-08T21:52:20,495 copying biostoch/model.py -> build/lib/biostoch 2024-03-08T21:52:20,497 copying biostoch/__main__.py -> build/lib/biostoch 2024-03-08T21:52:20,499 copying biostoch/ode.py -> build/lib/biostoch 2024-03-08T21:52:20,502 copying biostoch/visualization.py -> build/lib/biostoch 2024-03-08T21:52:20,506 running egg_info 2024-03-08T21:52:20,564 writing biostoch.egg-info/PKG-INFO 2024-03-08T21:52:20,567 writing dependency_links to biostoch.egg-info/dependency_links.txt 2024-03-08T21:52:20,570 writing requirements to biostoch.egg-info/requires.txt 2024-03-08T21:52:20,571 writing top-level names to biostoch.egg-info/top_level.txt 2024-03-08T21:52:20,598 reading manifest file 'biostoch.egg-info/SOURCES.txt' 2024-03-08T21:52:20,600 reading manifest template 'MANIFEST.in' 2024-03-08T21:52:20,606 adding license file 'LICENSE' 2024-03-08T21:52:20,609 writing manifest file 'biostoch.egg-info/SOURCES.txt' 2024-03-08T21:52:20,636 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-03-08T21:52:20,637 !! 2024-03-08T21:52:20,638 ******************************************************************************** 2024-03-08T21:52:20,638 Please avoid running ``setup.py`` directly. 2024-03-08T21:52:20,639 Instead, use pypa/build, pypa/installer or other 2024-03-08T21:52:20,639 standards-based tools. 2024-03-08T21:52:20,640 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-03-08T21:52:20,641 ******************************************************************************** 2024-03-08T21:52:20,642 !! 2024-03-08T21:52:20,643 self.initialize_options() 2024-03-08T21:52:20,664 installing to build/bdist.linux-armv7l/wheel 2024-03-08T21:52:20,665 running install 2024-03-08T21:52:20,688 running install_lib 2024-03-08T21:52:20,713 creating build/bdist.linux-armv7l 2024-03-08T21:52:20,714 creating build/bdist.linux-armv7l/wheel 2024-03-08T21:52:20,715 creating build/bdist.linux-armv7l/wheel/biostoch 2024-03-08T21:52:20,716 copying build/lib/biostoch/ssa.py -> build/bdist.linux-armv7l/wheel/biostoch 2024-03-08T21:52:20,718 copying build/lib/biostoch/tau_leaping.py -> build/bdist.linux-armv7l/wheel/biostoch 2024-03-08T21:52:20,721 copying build/lib/biostoch/cle.py -> build/bdist.linux-armv7l/wheel/biostoch 2024-03-08T21:52:20,723 copying build/lib/biostoch/__init__.py -> build/bdist.linux-armv7l/wheel/biostoch 2024-03-08T21:52:20,725 copying build/lib/biostoch/model.py -> build/bdist.linux-armv7l/wheel/biostoch 2024-03-08T21:52:20,727 copying build/lib/biostoch/__main__.py -> build/bdist.linux-armv7l/wheel/biostoch 2024-03-08T21:52:20,729 copying build/lib/biostoch/ode.py -> build/bdist.linux-armv7l/wheel/biostoch 2024-03-08T21:52:20,732 copying build/lib/biostoch/visualization.py -> build/bdist.linux-armv7l/wheel/biostoch 2024-03-08T21:52:20,734 running install_egg_info 2024-03-08T21:52:20,764 Copying biostoch.egg-info to build/bdist.linux-armv7l/wheel/biostoch-0.0.5-py3.11.egg-info 2024-03-08T21:52:20,775 running install_scripts 2024-03-08T21:52:20,790 creating build/bdist.linux-armv7l/wheel/biostoch-0.0.5.dist-info/WHEEL 2024-03-08T21:52:20,793 creating '/tmp/pip-wheel-yk90gx2m/biostoch-0.0.5-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-03-08T21:52:20,796 adding 'biostoch/__init__.py' 2024-03-08T21:52:20,797 adding 'biostoch/__main__.py' 2024-03-08T21:52:20,799 adding 'biostoch/cle.py' 2024-03-08T21:52:20,801 adding 'biostoch/model.py' 2024-03-08T21:52:20,802 adding 'biostoch/ode.py' 2024-03-08T21:52:20,804 adding 'biostoch/ssa.py' 2024-03-08T21:52:20,806 adding 'biostoch/tau_leaping.py' 2024-03-08T21:52:20,807 adding 'biostoch/visualization.py' 2024-03-08T21:52:20,809 adding 'biostoch-0.0.5.dist-info/LICENSE' 2024-03-08T21:52:20,811 adding 'biostoch-0.0.5.dist-info/METADATA' 2024-03-08T21:52:20,812 adding 'biostoch-0.0.5.dist-info/WHEEL' 2024-03-08T21:52:20,813 adding 'biostoch-0.0.5.dist-info/top_level.txt' 2024-03-08T21:52:20,813 adding 'biostoch-0.0.5.dist-info/RECORD' 2024-03-08T21:52:20,815 removing build/bdist.linux-armv7l/wheel 2024-03-08T21:52:20,930 Building wheel for biostoch (setup.py): finished with status 'done' 2024-03-08T21:52:20,933 Created wheel for biostoch: filename=biostoch-0.0.5-py3-none-any.whl size=14091 sha256=33bcfb808db6254143dd49bd7c03f727892aae2dff2290faccf02b2469c41383 2024-03-08T21:52:20,934 Stored in directory: /tmp/pip-ephem-wheel-cache-snjnym9s/wheels/29/99/0c/c493088d36b689b3ec2cab087862b40a1fa4462e481aaff145 2024-03-08T21:52:20,944 Successfully built biostoch 2024-03-08T21:52:20,948 Removed build tracker: '/tmp/pip-build-tracker-ibwhobog'