2024-03-12T01:55:48,877 Created temporary directory: /tmp/pip-build-tracker-m7jacp2s
2024-03-12T01:55:48,878 Initialized build tracking at /tmp/pip-build-tracker-m7jacp2s
2024-03-12T01:55:48,879 Created build tracker: /tmp/pip-build-tracker-m7jacp2s
2024-03-12T01:55:48,879 Entered build tracker: /tmp/pip-build-tracker-m7jacp2s
2024-03-12T01:55:48,880 Created temporary directory: /tmp/pip-wheel-5uyumpiw
2024-03-12T01:55:48,883 Created temporary directory: /tmp/pip-ephem-wheel-cache-a5hrwrpo
2024-03-12T01:55:48,905 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-03-12T01:55:48,908 2 location(s) to search for versions of pub-worm:
2024-03-12T01:55:48,908 * https://pypi.org/simple/pub-worm/
2024-03-12T01:55:48,908 * https://www.piwheels.org/simple/pub-worm/
2024-03-12T01:55:48,909 Fetching project page and analyzing links: https://pypi.org/simple/pub-worm/
2024-03-12T01:55:48,910 Getting page https://pypi.org/simple/pub-worm/
2024-03-12T01:55:48,911 Found index url https://pypi.org/simple/
2024-03-12T01:55:49,123 Fetched page https://pypi.org/simple/pub-worm/ as application/vnd.pypi.simple.v1+json
2024-03-12T01:55:49,126   Found link https://files.pythonhosted.org/packages/b8/f0/9bb3afc5b9c0aba5ffc3e0530f85826c7d472bd722f814015247c340fb9f/pub_worm-0.0.1.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.0.1
2024-03-12T01:55:49,126   Found link https://files.pythonhosted.org/packages/d8/da/df592d4da97e43ba80b8d21977686643e2fe53863198e8636d52f8385c43/pub_worm-0.1.1.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.1.1
2024-03-12T01:55:49,127   Found link https://files.pythonhosted.org/packages/6f/b8/c578681405080946ef981f7d8ffca920a824488067c8d71585d3ed6a579d/pub_worm-0.1.2.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.1.2
2024-03-12T01:55:49,128   Found link https://files.pythonhosted.org/packages/95/ea/f0d51e75f6a6bc592da883218d988cf193bf319166fa473a9b9b88e8d264/pub_worm-0.1.3.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.1.3
2024-03-12T01:55:49,128   Found link https://files.pythonhosted.org/packages/75/a9/79c8f5eedf2bb7efb9da2d0fe145f73a38f517eb8598c34ee7c96cde0708/pub_worm-0.1.4.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.1.4
2024-03-12T01:55:49,129   Found link https://files.pythonhosted.org/packages/49/b1/562faa427fd1ff40c449f87cda75c7c1df17d70bb5190dd9acaa36d175b1/pub_worm-0.1.5.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.1.5
2024-03-12T01:55:49,130   Found link https://files.pythonhosted.org/packages/80/a0/1ce94f51ef16d83a09dea4f1985b068452c7880801597bd3eb82efd056fc/pub_worm-0.1.6.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.1.6
2024-03-12T01:55:49,131   Found link https://files.pythonhosted.org/packages/a3/21/a1cd9d1377b513ca7bb426346eb849aa4c84f3b3a3e1d80c0c7b05585d92/pub_worm-0.1.7.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.1.7
2024-03-12T01:55:49,131   Found link https://files.pythonhosted.org/packages/8f/fc/a0c2da18b286317e2843459c01336317cfeaa46efe28b278201968d1176d/pub_worm-0.1.8.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.1.8
2024-03-12T01:55:49,132   Found link https://files.pythonhosted.org/packages/05/8b/338f3714f1fa9c96e6eb4161453ee1686e7e852c3e568f53de43d9181cba/pub_worm-0.1.9.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.1.9
2024-03-12T01:55:49,133   Found link https://files.pythonhosted.org/packages/97/77/c5713bb989282f6cc978673a6444be453c991049862f200a583aae8061de/pub_worm-0.2.0.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.2.0
2024-03-12T01:55:49,133   Found link https://files.pythonhosted.org/packages/ba/54/2d9a593a5d99fea472983a809a8764698e89d7e9336eb4dece805bb685d1/pub_worm-0.2.1.tar.gz (from https://pypi.org/simple/pub-worm/), version: 0.2.1
2024-03-12T01:55:49,134 Fetching project page and analyzing links: https://www.piwheels.org/simple/pub-worm/
2024-03-12T01:55:49,135 Getting page https://www.piwheels.org/simple/pub-worm/
2024-03-12T01:55:49,136 Found index url https://www.piwheels.org/simple/
2024-03-12T01:55:49,369 Fetched page https://www.piwheels.org/simple/pub-worm/ as text/html
2024-03-12T01:55:49,373   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.2.0-py3-none-any.whl#sha256=0fe4aa97fb602755d99717699395e7014f676d4ee4572930652a00f5b0407400 (from https://www.piwheels.org/simple/pub-worm/)
2024-03-12T01:55:49,374   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.1.9-py3-none-any.whl#sha256=d36153a6672446b80a3ad4a128123f60f80f8f1444122936363fa80165d19f7a (from https://www.piwheels.org/simple/pub-worm/)
2024-03-12T01:55:49,374   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.1.8-py3-none-any.whl#sha256=ad3c0117baeaa8c04f86149fa0dd71f6ea65d60213da6d6b570d0157572afe2c (from https://www.piwheels.org/simple/pub-worm/)
2024-03-12T01:55:49,375   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.1.7-py3-none-any.whl#sha256=5b88eaacc4effbdf9cc173c4732a2ac60eac0a420ccac19ba626a2be72b7f12a (from https://www.piwheels.org/simple/pub-worm/)
2024-03-12T01:55:49,375   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.1.6-py3-none-any.whl#sha256=b18fb87705630077e0c3647f52c14b61e3b0ced91b1628a96bd5406c384f38ea (from https://www.piwheels.org/simple/pub-worm/)
2024-03-12T01:55:49,376   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.1.5-py3-none-any.whl#sha256=194f3e97c1023b9ba1e3ada69ff1de5c0883d9bf2e6c11d2b6173cf86f7d23ec (from https://www.piwheels.org/simple/pub-worm/)
2024-03-12T01:55:49,376   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.1.4-py3-none-any.whl#sha256=84de546e9b8e73c3cdbccb497a05d28c60537eda48d1b1fdb879be94e3fe3f27 (from https://www.piwheels.org/simple/pub-worm/)
2024-03-12T01:55:49,377   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.1.3-py3-none-any.whl#sha256=c93d251f88dea0862a7a5878ea9d242ca2a3dfc38922c876268f91def0e576c1 (from https://www.piwheels.org/simple/pub-worm/)
2024-03-12T01:55:49,377   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.1.2-py3-none-any.whl#sha256=414b783788f7426c998a30debf92f860ff421126db3b85415eedd560336e1cbb (from https://www.piwheels.org/simple/pub-worm/)
2024-03-12T01:55:49,378   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.1.1-py3-none-any.whl#sha256=dc4fcd02bf9ebdf2ea21f21ce51753823c46f53bdf7ad2cc731b344c105df198 (from https://www.piwheels.org/simple/pub-worm/)
2024-03-12T01:55:49,378   Skipping link: No binaries permitted for pub-worm: https://www.piwheels.org/simple/pub-worm/pub_worm-0.0.1-py3-none-any.whl#sha256=64fc08fd5ed29b5a07f1941f7d146f1e984af13e0587f87fc5f8c4c194bd7330 (from https://www.piwheels.org/simple/pub-worm/)
2024-03-12T01:55:49,379 Skipping link: not a file: https://www.piwheels.org/simple/pub-worm/
2024-03-12T01:55:49,380 Skipping link: not a file: https://pypi.org/simple/pub-worm/
2024-03-12T01:55:49,400 Given no hashes to check 1 links for project 'pub-worm': discarding no candidates
2024-03-12T01:55:49,418 Collecting pub-worm==0.2.1
2024-03-12T01:55:49,420   Created temporary directory: /tmp/pip-unpack-tl00paoq
2024-03-12T01:55:49,640   Downloading pub_worm-0.2.1.tar.gz (385 kB)
2024-03-12T01:55:49,825   Added pub-worm==0.2.1 from https://files.pythonhosted.org/packages/ba/54/2d9a593a5d99fea472983a809a8764698e89d7e9336eb4dece805bb685d1/pub_worm-0.2.1.tar.gz to build tracker '/tmp/pip-build-tracker-m7jacp2s'
2024-03-12T01:55:49,828   Running setup.py (path:/tmp/pip-wheel-5uyumpiw/pub-worm_26fde72f2490423396607709667f0852/setup.py) egg_info for package pub-worm
2024-03-12T01:55:49,828   Created temporary directory: /tmp/pip-pip-egg-info-am6oxvzx
2024-03-12T01:55:49,829   Preparing metadata (setup.py): started
2024-03-12T01:55:49,831   Running command python setup.py egg_info
2024-03-12T01:55:50,903   running egg_info
2024-03-12T01:55:50,904   creating /tmp/pip-pip-egg-info-am6oxvzx/pub_worm.egg-info
2024-03-12T01:55:50,929   writing /tmp/pip-pip-egg-info-am6oxvzx/pub_worm.egg-info/PKG-INFO
2024-03-12T01:55:50,932   writing dependency_links to /tmp/pip-pip-egg-info-am6oxvzx/pub_worm.egg-info/dependency_links.txt
2024-03-12T01:55:50,934   writing requirements to /tmp/pip-pip-egg-info-am6oxvzx/pub_worm.egg-info/requires.txt
2024-03-12T01:55:50,935   writing top-level names to /tmp/pip-pip-egg-info-am6oxvzx/pub_worm.egg-info/top_level.txt
2024-03-12T01:55:50,936   writing manifest file '/tmp/pip-pip-egg-info-am6oxvzx/pub_worm.egg-info/SOURCES.txt'
2024-03-12T01:55:51,017   reading manifest file '/tmp/pip-pip-egg-info-am6oxvzx/pub_worm.egg-info/SOURCES.txt'
2024-03-12T01:55:51,018   reading manifest template 'MANIFEST.in'
2024-03-12T01:55:51,022   writing manifest file '/tmp/pip-pip-egg-info-am6oxvzx/pub_worm.egg-info/SOURCES.txt'
2024-03-12T01:55:51,128   Preparing metadata (setup.py): finished with status 'done'
2024-03-12T01:55:51,132   Source in /tmp/pip-wheel-5uyumpiw/pub-worm_26fde72f2490423396607709667f0852 has version 0.2.1, which satisfies requirement pub-worm==0.2.1 from https://files.pythonhosted.org/packages/ba/54/2d9a593a5d99fea472983a809a8764698e89d7e9336eb4dece805bb685d1/pub_worm-0.2.1.tar.gz
2024-03-12T01:55:51,133   Removed pub-worm==0.2.1 from https://files.pythonhosted.org/packages/ba/54/2d9a593a5d99fea472983a809a8764698e89d7e9336eb4dece805bb685d1/pub_worm-0.2.1.tar.gz from build tracker '/tmp/pip-build-tracker-m7jacp2s'
2024-03-12T01:55:51,137 Created temporary directory: /tmp/pip-unpack-p9x2g52b
2024-03-12T01:55:51,138 Created temporary directory: /tmp/pip-unpack-62y7iz9e
2024-03-12T01:55:51,142 Building wheels for collected packages: pub-worm
2024-03-12T01:55:51,146   Created temporary directory: /tmp/pip-wheel-1ahkrq5h
2024-03-12T01:55:51,147   Building wheel for pub-worm (setup.py): started
2024-03-12T01:55:51,148   Destination directory: /tmp/pip-wheel-1ahkrq5h
2024-03-12T01:55:51,149   Running command python setup.py bdist_wheel
2024-03-12T01:55:52,162   running bdist_wheel
2024-03-12T01:55:52,258   running build
2024-03-12T01:55:52,259   running build_py
2024-03-12T01:55:52,286   creating build
2024-03-12T01:55:52,286   creating build/lib
2024-03-12T01:55:52,287   creating build/lib/pub_worm
2024-03-12T01:55:52,288   copying pub_worm/__init__.py -> build/lib/pub_worm
2024-03-12T01:55:52,290   creating build/lib/pub_worm/ncbi
2024-03-12T01:55:52,291   copying pub_worm/ncbi/entreze_api.py -> build/lib/pub_worm/ncbi
2024-03-12T01:55:52,294   copying pub_worm/ncbi/__init__.py -> build/lib/pub_worm/ncbi
2024-03-12T01:55:52,296   creating build/lib/pub_worm/impact_factor
2024-03-12T01:55:52,296   copying pub_worm/impact_factor/impact_factor_lookup.py -> build/lib/pub_worm/impact_factor
2024-03-12T01:55:52,298   copying pub_worm/impact_factor/__init__.py -> build/lib/pub_worm/impact_factor
2024-03-12T01:55:52,300   creating build/lib/pub_worm/wormbase
2024-03-12T01:55:52,301   copying pub_worm/wormbase/to_csv_helpers.py -> build/lib/pub_worm/wormbase
2024-03-12T01:55:52,303   copying pub_worm/wormbase/__init__.py -> build/lib/pub_worm/wormbase
2024-03-12T01:55:52,305   copying pub_worm/wormbase/wormbase_api.py -> build/lib/pub_worm/wormbase
2024-03-12T01:55:52,306   running egg_info
2024-03-12T01:55:52,362   writing pub_worm.egg-info/PKG-INFO
2024-03-12T01:55:52,364   writing dependency_links to pub_worm.egg-info/dependency_links.txt
2024-03-12T01:55:52,366   writing requirements to pub_worm.egg-info/requires.txt
2024-03-12T01:55:52,367   writing top-level names to pub_worm.egg-info/top_level.txt
2024-03-12T01:55:52,395   reading manifest file 'pub_worm.egg-info/SOURCES.txt'
2024-03-12T01:55:52,398   reading manifest template 'MANIFEST.in'
2024-03-12T01:55:52,401   writing manifest file 'pub_worm.egg-info/SOURCES.txt'
2024-03-12T01:55:52,403   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'pub_worm.impact_factor.data' is absent from the `packages` configuration.
2024-03-12T01:55:52,404   !!

2024-03-12T01:55:52,405           ********************************************************************************
2024-03-12T01:55:52,406           ############################
2024-03-12T01:55:52,406           # Package would be ignored #
2024-03-12T01:55:52,407           ############################
2024-03-12T01:55:52,407           Python recognizes 'pub_worm.impact_factor.data' as an importable package[^1],
2024-03-12T01:55:52,408           but it is absent from setuptools' `packages` configuration.

2024-03-12T01:55:52,408           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-12T01:55:52,409           package, please make sure that 'pub_worm.impact_factor.data' is explicitly added
2024-03-12T01:55:52,409           to the `packages` configuration field.

2024-03-12T01:55:52,410           Alternatively, you can also rely on setuptools' discovery methods
2024-03-12T01:55:52,411           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-12T01:55:52,411           instead of `find_packages(...)`/`find:`).

2024-03-12T01:55:52,412           You can read more about "package discovery" on setuptools documentation page:

2024-03-12T01:55:52,413           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-12T01:55:52,414           If you don't want 'pub_worm.impact_factor.data' to be distributed and are
2024-03-12T01:55:52,414           already explicitly excluding 'pub_worm.impact_factor.data' via
2024-03-12T01:55:52,415           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-12T01:55:52,415           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-12T01:55:52,416           combination with a more fine grained `package-data` configuration.

2024-03-12T01:55:52,417           You can read more about "package data files" on setuptools documentation page:

2024-03-12T01:55:52,418           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-12T01:55:52,420           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-12T01:55:52,421                 even if it does not contain any `.py` files.
2024-03-12T01:55:52,422                 On the other hand, currently there is no concept of package data
2024-03-12T01:55:52,425                 directory, all directories are treated like packages.
2024-03-12T01:55:52,427           ********************************************************************************

2024-03-12T01:55:52,441   !!
2024-03-12T01:55:52,442     check.warn(importable)
2024-03-12T01:55:52,442   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'pub_worm.ncbi.data' is absent from the `packages` configuration.
2024-03-12T01:55:52,443   !!

2024-03-12T01:55:52,444           ********************************************************************************
2024-03-12T01:55:52,444           ############################
2024-03-12T01:55:52,445           # Package would be ignored #
2024-03-12T01:55:52,445           ############################
2024-03-12T01:55:52,446           Python recognizes 'pub_worm.ncbi.data' as an importable package[^1],
2024-03-12T01:55:52,446           but it is absent from setuptools' `packages` configuration.

2024-03-12T01:55:52,448           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-12T01:55:52,448           package, please make sure that 'pub_worm.ncbi.data' is explicitly added
2024-03-12T01:55:52,449           to the `packages` configuration field.

2024-03-12T01:55:52,450           Alternatively, you can also rely on setuptools' discovery methods
2024-03-12T01:55:52,450           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-12T01:55:52,451           instead of `find_packages(...)`/`find:`).

2024-03-12T01:55:52,452           You can read more about "package discovery" on setuptools documentation page:

2024-03-12T01:55:52,453           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-12T01:55:52,454           If you don't want 'pub_worm.ncbi.data' to be distributed and are
2024-03-12T01:55:52,454           already explicitly excluding 'pub_worm.ncbi.data' via
2024-03-12T01:55:52,455           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-12T01:55:52,455           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-12T01:55:52,455           combination with a more fine grained `package-data` configuration.

2024-03-12T01:55:52,456           You can read more about "package data files" on setuptools documentation page:

2024-03-12T01:55:52,457           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-12T01:55:52,458           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-12T01:55:52,459                 even if it does not contain any `.py` files.
2024-03-12T01:55:52,459                 On the other hand, currently there is no concept of package data
2024-03-12T01:55:52,460                 directory, all directories are treated like packages.
2024-03-12T01:55:52,460           ********************************************************************************

2024-03-12T01:55:52,461   !!
2024-03-12T01:55:52,462     check.warn(importable)
2024-03-12T01:55:52,462   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'pub_worm.wormbase.data' is absent from the `packages` configuration.
2024-03-12T01:55:52,463   !!

2024-03-12T01:55:52,464           ********************************************************************************
2024-03-12T01:55:52,464           ############################
2024-03-12T01:55:52,465           # Package would be ignored #
2024-03-12T01:55:52,465           ############################
2024-03-12T01:55:52,466           Python recognizes 'pub_worm.wormbase.data' as an importable package[^1],
2024-03-12T01:55:52,466           but it is absent from setuptools' `packages` configuration.

2024-03-12T01:55:52,468           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-12T01:55:52,468           package, please make sure that 'pub_worm.wormbase.data' is explicitly added
2024-03-12T01:55:52,469           to the `packages` configuration field.

2024-03-12T01:55:52,470           Alternatively, you can also rely on setuptools' discovery methods
2024-03-12T01:55:52,470           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-12T01:55:52,471           instead of `find_packages(...)`/`find:`).

2024-03-12T01:55:52,472           You can read more about "package discovery" on setuptools documentation page:

2024-03-12T01:55:52,473           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-12T01:55:52,474           If you don't want 'pub_worm.wormbase.data' to be distributed and are
2024-03-12T01:55:52,475           already explicitly excluding 'pub_worm.wormbase.data' via
2024-03-12T01:55:52,476           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-12T01:55:52,476           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-12T01:55:52,477           combination with a more fine grained `package-data` configuration.

2024-03-12T01:55:52,478           You can read more about "package data files" on setuptools documentation page:

2024-03-12T01:55:52,479           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-12T01:55:52,481           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-12T01:55:52,481                 even if it does not contain any `.py` files.
2024-03-12T01:55:52,482                 On the other hand, currently there is no concept of package data
2024-03-12T01:55:52,482                 directory, all directories are treated like packages.
2024-03-12T01:55:52,483           ********************************************************************************

2024-03-12T01:55:52,484   !!
2024-03-12T01:55:52,484     check.warn(importable)
2024-03-12T01:55:52,485   creating build/lib/pub_worm/ncbi/data
2024-03-12T01:55:52,485   copying pub_worm/ncbi/data/ncbi_efetch.json -> build/lib/pub_worm/ncbi/data
2024-03-12T01:55:52,486   copying pub_worm/ncbi/data/ncbi_esearch.json -> build/lib/pub_worm/ncbi/data
2024-03-12T01:55:52,486   copying pub_worm/ncbi/data/ncbi_esummary.json -> build/lib/pub_worm/ncbi/data
2024-03-12T01:55:52,487   creating build/lib/pub_worm/impact_factor/data
2024-03-12T01:55:52,487   copying pub_worm/impact_factor/data/2022_JCR_IF.csv -> build/lib/pub_worm/impact_factor/data
2024-03-12T01:55:52,488   creating build/lib/pub_worm/wormbase/data
2024-03-12T01:55:52,488   copying pub_worm/wormbase/data/wormbase_field_gene.json -> build/lib/pub_worm/wormbase/data
2024-03-12T01:55:52,489   copying pub_worm/wormbase/data/wormbase_field_paper.json -> build/lib/pub_worm/wormbase/data
2024-03-12T01:55:52,489   copying pub_worm/wormbase/data/wormbase_widget_gene.json -> build/lib/pub_worm/wormbase/data
2024-03-12T01:55:52,492   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2024-03-12T01:55:52,492   !!

2024-03-12T01:55:52,493           ********************************************************************************
2024-03-12T01:55:52,494           Please avoid running ``setup.py`` directly.
2024-03-12T01:55:52,494           Instead, use pypa/build, pypa/installer or other
2024-03-12T01:55:52,495           standards-based tools.

2024-03-12T01:55:52,496           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2024-03-12T01:55:52,497           ********************************************************************************

2024-03-12T01:55:52,498   !!
2024-03-12T01:55:52,498     self.initialize_options()
2024-03-12T01:55:52,519   installing to build/bdist.linux-armv7l/wheel
2024-03-12T01:55:52,520   running install
2024-03-12T01:55:52,543   running install_lib
2024-03-12T01:55:52,568   creating build/bdist.linux-armv7l
2024-03-12T01:55:52,569   creating build/bdist.linux-armv7l/wheel
2024-03-12T01:55:52,571   creating build/bdist.linux-armv7l/wheel/pub_worm
2024-03-12T01:55:52,572   creating build/bdist.linux-armv7l/wheel/pub_worm/ncbi
2024-03-12T01:55:52,573   creating build/bdist.linux-armv7l/wheel/pub_worm/ncbi/data
2024-03-12T01:55:52,574   copying build/lib/pub_worm/ncbi/data/ncbi_esearch.json -> build/bdist.linux-armv7l/wheel/pub_worm/ncbi/data
2024-03-12T01:55:52,576   copying build/lib/pub_worm/ncbi/data/ncbi_efetch.json -> build/bdist.linux-armv7l/wheel/pub_worm/ncbi/data
2024-03-12T01:55:52,578   copying build/lib/pub_worm/ncbi/data/ncbi_esummary.json -> build/bdist.linux-armv7l/wheel/pub_worm/ncbi/data
2024-03-12T01:55:52,580   copying build/lib/pub_worm/ncbi/entreze_api.py -> build/bdist.linux-armv7l/wheel/pub_worm/ncbi
2024-03-12T01:55:52,582   copying build/lib/pub_worm/ncbi/__init__.py -> build/bdist.linux-armv7l/wheel/pub_worm/ncbi
2024-03-12T01:55:52,584   creating build/bdist.linux-armv7l/wheel/pub_worm/impact_factor
2024-03-12T01:55:52,586   creating build/bdist.linux-armv7l/wheel/pub_worm/impact_factor/data
2024-03-12T01:55:52,587   copying build/lib/pub_worm/impact_factor/data/2022_JCR_IF.csv -> build/bdist.linux-armv7l/wheel/pub_worm/impact_factor/data
2024-03-12T01:55:52,614   copying build/lib/pub_worm/impact_factor/impact_factor_lookup.py -> build/bdist.linux-armv7l/wheel/pub_worm/impact_factor
2024-03-12T01:55:52,616   copying build/lib/pub_worm/impact_factor/__init__.py -> build/bdist.linux-armv7l/wheel/pub_worm/impact_factor
2024-03-12T01:55:52,618   creating build/bdist.linux-armv7l/wheel/pub_worm/wormbase
2024-03-12T01:55:52,620   creating build/bdist.linux-armv7l/wheel/pub_worm/wormbase/data
2024-03-12T01:55:52,621   copying build/lib/pub_worm/wormbase/data/wormbase_field_paper.json -> build/bdist.linux-armv7l/wheel/pub_worm/wormbase/data
2024-03-12T01:55:52,624   copying build/lib/pub_worm/wormbase/data/wormbase_field_gene.json -> build/bdist.linux-armv7l/wheel/pub_worm/wormbase/data
2024-03-12T01:55:52,627   copying build/lib/pub_worm/wormbase/data/wormbase_widget_gene.json -> build/bdist.linux-armv7l/wheel/pub_worm/wormbase/data
2024-03-12T01:55:52,630   copying build/lib/pub_worm/wormbase/to_csv_helpers.py -> build/bdist.linux-armv7l/wheel/pub_worm/wormbase
2024-03-12T01:55:52,632   copying build/lib/pub_worm/wormbase/__init__.py -> build/bdist.linux-armv7l/wheel/pub_worm/wormbase
2024-03-12T01:55:52,634   copying build/lib/pub_worm/wormbase/wormbase_api.py -> build/bdist.linux-armv7l/wheel/pub_worm/wormbase
2024-03-12T01:55:52,637   copying build/lib/pub_worm/__init__.py -> build/bdist.linux-armv7l/wheel/pub_worm
2024-03-12T01:55:52,638   running install_egg_info
2024-03-12T01:55:52,669   Copying pub_worm.egg-info to build/bdist.linux-armv7l/wheel/pub_worm-0.2.1-py3.11.egg-info
2024-03-12T01:55:52,680   running install_scripts
2024-03-12T01:55:52,691   creating build/bdist.linux-armv7l/wheel/pub_worm-0.2.1.dist-info/WHEEL
2024-03-12T01:55:52,694   creating '/tmp/pip-wheel-1ahkrq5h/pub_worm-0.2.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-03-12T01:55:52,696   adding 'pub_worm/__init__.py'
2024-03-12T01:55:52,698   adding 'pub_worm/impact_factor/__init__.py'
2024-03-12T01:55:52,699   adding 'pub_worm/impact_factor/impact_factor_lookup.py'
2024-03-12T01:55:52,865   adding 'pub_worm/impact_factor/data/2022_JCR_IF.csv'
2024-03-12T01:55:52,875   adding 'pub_worm/ncbi/__init__.py'
2024-03-12T01:55:52,877   adding 'pub_worm/ncbi/entreze_api.py'
2024-03-12T01:55:52,880   adding 'pub_worm/ncbi/data/ncbi_efetch.json'
2024-03-12T01:55:52,881   adding 'pub_worm/ncbi/data/ncbi_esearch.json'
2024-03-12T01:55:52,883   adding 'pub_worm/ncbi/data/ncbi_esummary.json'
2024-03-12T01:55:52,884   adding 'pub_worm/wormbase/__init__.py'
2024-03-12T01:55:52,886   adding 'pub_worm/wormbase/to_csv_helpers.py'
2024-03-12T01:55:52,888   adding 'pub_worm/wormbase/wormbase_api.py'
2024-03-12T01:55:52,890   adding 'pub_worm/wormbase/data/wormbase_field_gene.json'
2024-03-12T01:55:52,891   adding 'pub_worm/wormbase/data/wormbase_field_paper.json'
2024-03-12T01:55:52,893   adding 'pub_worm/wormbase/data/wormbase_widget_gene.json'
2024-03-12T01:55:52,895   adding 'pub_worm-0.2.1.dist-info/METADATA'
2024-03-12T01:55:52,896   adding 'pub_worm-0.2.1.dist-info/WHEEL'
2024-03-12T01:55:52,897   adding 'pub_worm-0.2.1.dist-info/top_level.txt'
2024-03-12T01:55:52,898   adding 'pub_worm-0.2.1.dist-info/RECORD'
2024-03-12T01:55:52,904   removing build/bdist.linux-armv7l/wheel
2024-03-12T01:55:53,022   Building wheel for pub-worm (setup.py): finished with status 'done'
2024-03-12T01:55:53,028   Created wheel for pub-worm: filename=pub_worm-0.2.1-py3-none-any.whl size=389816 sha256=2cd541418ccbf9158ab7e18b187c7d7bc297928fbb5f4817f84f67552fd20c2a
2024-03-12T01:55:53,030   Stored in directory: /tmp/pip-ephem-wheel-cache-a5hrwrpo/wheels/e6/54/9f/c636002ac250f8565e686f23e45c46eed0910a18253e2da7be
2024-03-12T01:55:53,039 Successfully built pub-worm
2024-03-12T01:55:53,262 Removed build tracker: '/tmp/pip-build-tracker-m7jacp2s'