2024-03-13T19:38:22,351 Created temporary directory: /tmp/pip-build-tracker-wxr9dh5d 2024-03-13T19:38:22,352 Initialized build tracking at /tmp/pip-build-tracker-wxr9dh5d 2024-03-13T19:38:22,353 Created build tracker: /tmp/pip-build-tracker-wxr9dh5d 2024-03-13T19:38:22,353 Entered build tracker: /tmp/pip-build-tracker-wxr9dh5d 2024-03-13T19:38:22,354 Created temporary directory: /tmp/pip-wheel-_lkx02_z 2024-03-13T19:38:22,357 Created temporary directory: /tmp/pip-ephem-wheel-cache-jbh24dza 2024-03-13T19:38:22,380 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-03-13T19:38:22,383 2 location(s) to search for versions of detelpy: 2024-03-13T19:38:22,383 * https://pypi.org/simple/detelpy/ 2024-03-13T19:38:22,383 * https://www.piwheels.org/simple/detelpy/ 2024-03-13T19:38:22,384 Fetching project page and analyzing links: https://pypi.org/simple/detelpy/ 2024-03-13T19:38:22,384 Getting page https://pypi.org/simple/detelpy/ 2024-03-13T19:38:22,386 Found index url https://pypi.org/simple/ 2024-03-13T19:38:22,602 Fetched page https://pypi.org/simple/detelpy/ as application/vnd.pypi.simple.v1+json 2024-03-13T19:38:22,605 Skipping link: No binaries permitted for detelpy: https://files.pythonhosted.org/packages/db/f9/bc0dbec2a4d6d1475932b7518ac63d64ac81049b434e198db8656ab425bd/deTELpy-0.1.5-py2.py3-none-any.whl (from https://pypi.org/simple/detelpy/) 2024-03-13T19:38:22,606 Found link https://files.pythonhosted.org/packages/22/3f/15466cf4b2595b7246b62925f94053b5eda33ebb45ee42beca9aaac8b019/deTELpy-0.1.5.tar.gz (from https://pypi.org/simple/detelpy/), version: 0.1.5 2024-03-13T19:38:22,606 Skipping link: No binaries permitted for detelpy: https://files.pythonhosted.org/packages/c8/ad/0100ba6927059fc7031a30f462869e66bb536cd6668ede497a9950b38043/deTELpy-0.1.6-py2.py3-none-any.whl (from https://pypi.org/simple/detelpy/) 2024-03-13T19:38:22,607 Found link https://files.pythonhosted.org/packages/50/41/3a6971253ad46bb8ba4fc484b5c5ea980932a318bc54e58690c1bd30d513/deTELpy-0.1.6.tar.gz (from https://pypi.org/simple/detelpy/), version: 0.1.6 2024-03-13T19:38:22,608 Skipping link: No binaries permitted for detelpy: https://files.pythonhosted.org/packages/91/b9/360b31802cd03b5ad0038272aab957f589b15f9303d73e86474d3c7de3cb/deTELpy-0.1.7-py2.py3-none-any.whl (from https://pypi.org/simple/detelpy/) 2024-03-13T19:38:22,608 Found link https://files.pythonhosted.org/packages/d9/4f/2d958b2add4c7a3462560e446377d6ea083c2d44473a6087353a68ae4ac8/deTELpy-0.1.7.tar.gz (from https://pypi.org/simple/detelpy/), version: 0.1.7 2024-03-13T19:38:22,609 Skipping link: No binaries permitted for detelpy: https://files.pythonhosted.org/packages/cd/14/b658611e53e5670ebb7dd44d48877a90956f1d4cbb085a8ddb78acfee2ef/deTELpy-0.1.8-py2.py3-none-any.whl (from https://pypi.org/simple/detelpy/) 2024-03-13T19:38:22,610 Skipping link: No binaries permitted for detelpy: https://files.pythonhosted.org/packages/9f/f6/2066320a2f3bb827a4f0a6b0a0983cb9767929990169b56421cf81fc591a/deTELpy-0.1.10-py3-none-any.whl (from https://pypi.org/simple/detelpy/) 2024-03-13T19:38:22,611 Found link https://files.pythonhosted.org/packages/da/15/b001bf1bfa816d98945ee7b1e44f5784a66133665c960057fb2d8e7c312e/deTELpy-0.1.10.tar.gz (from https://pypi.org/simple/detelpy/), version: 0.1.10 2024-03-13T19:38:22,611 Skipping link: No binaries permitted for detelpy: https://files.pythonhosted.org/packages/aa/db/70cd92ab19021d6c3337a42c9ee73da19ee7b692a643b2af0b1132a1518a/deTELpy-0.1.11-py3-none-any.whl (from https://pypi.org/simple/detelpy/) 2024-03-13T19:38:22,612 Found link https://files.pythonhosted.org/packages/95/5d/310b2a0a17802ed8dbae51df91e3d28952daab43ed1ec78e1258783d88b6/deTELpy-0.1.11.tar.gz (from https://pypi.org/simple/detelpy/), version: 0.1.11 2024-03-13T19:38:22,613 Fetching project page and analyzing links: https://www.piwheels.org/simple/detelpy/ 2024-03-13T19:38:22,613 Getting page https://www.piwheels.org/simple/detelpy/ 2024-03-13T19:38:22,615 Found index url https://www.piwheels.org/simple/ 2024-03-13T19:38:22,842 Fetched page https://www.piwheels.org/simple/detelpy/ as text/html 2024-03-13T19:38:22,844 Skipping link: No binaries permitted for detelpy: https://www.piwheels.org/simple/detelpy/deTELpy-0.1.7-py3-none-any.whl#sha256=7d4b0995054f44d3eb3b3197150cac43d87668932f24dd773e10a231172b0e85 (from https://www.piwheels.org/simple/detelpy/) 2024-03-13T19:38:22,845 Skipping link: No binaries permitted for detelpy: https://www.piwheels.org/simple/detelpy/deTELpy-0.1.6-py3-none-any.whl#sha256=d747c0f23830407fc76e8bfae8db47929cb7f8db69533a8ee60dda7a8736a351 (from https://www.piwheels.org/simple/detelpy/) 2024-03-13T19:38:22,845 Skipping link: No binaries permitted for detelpy: https://www.piwheels.org/simple/detelpy/deTELpy-0.1.5-py3-none-any.whl#sha256=9585ac7384c61d0027fb3069e83ee216a12cf86b69b32d4c5a26d0c9ecbd2bfc (from https://www.piwheels.org/simple/detelpy/) 2024-03-13T19:38:22,846 Skipping link: not a file: https://www.piwheels.org/simple/detelpy/ 2024-03-13T19:38:22,846 Skipping link: not a file: https://pypi.org/simple/detelpy/ 2024-03-13T19:38:22,865 Given no hashes to check 1 links for project 'detelpy': discarding no candidates 2024-03-13T19:38:22,883 Collecting detelpy==0.1.10 2024-03-13T19:38:22,885 Created temporary directory: /tmp/pip-unpack-fve9fpqz 2024-03-13T19:38:23,103 Downloading deTELpy-0.1.10.tar.gz (69 kB) 2024-03-13T19:38:23,261 Added detelpy==0.1.10 from https://files.pythonhosted.org/packages/da/15/b001bf1bfa816d98945ee7b1e44f5784a66133665c960057fb2d8e7c312e/deTELpy-0.1.10.tar.gz to build tracker '/tmp/pip-build-tracker-wxr9dh5d' 2024-03-13T19:38:23,263 Running setup.py (path:/tmp/pip-wheel-_lkx02_z/detelpy_f16619c10a2045dabda400628fbb008b/setup.py) egg_info for package detelpy 2024-03-13T19:38:23,263 Created temporary directory: /tmp/pip-pip-egg-info-_nq13lfo 2024-03-13T19:38:23,264 Preparing metadata (setup.py): started 2024-03-13T19:38:23,265 Running command python setup.py egg_info 2024-03-13T19:38:24,391 running egg_info 2024-03-13T19:38:24,393 creating /tmp/pip-pip-egg-info-_nq13lfo/deTELpy.egg-info 2024-03-13T19:38:24,420 writing /tmp/pip-pip-egg-info-_nq13lfo/deTELpy.egg-info/PKG-INFO 2024-03-13T19:38:24,424 writing dependency_links to /tmp/pip-pip-egg-info-_nq13lfo/deTELpy.egg-info/dependency_links.txt 2024-03-13T19:38:24,427 writing requirements to /tmp/pip-pip-egg-info-_nq13lfo/deTELpy.egg-info/requires.txt 2024-03-13T19:38:24,428 writing top-level names to /tmp/pip-pip-egg-info-_nq13lfo/deTELpy.egg-info/top_level.txt 2024-03-13T19:38:24,430 writing manifest file '/tmp/pip-pip-egg-info-_nq13lfo/deTELpy.egg-info/SOURCES.txt' 2024-03-13T19:38:24,528 reading manifest file '/tmp/pip-pip-egg-info-_nq13lfo/deTELpy.egg-info/SOURCES.txt' 2024-03-13T19:38:24,530 adding license file 'LICENSE' 2024-03-13T19:38:24,532 writing manifest file '/tmp/pip-pip-egg-info-_nq13lfo/deTELpy.egg-info/SOURCES.txt' 2024-03-13T19:38:24,639 Preparing metadata (setup.py): finished with status 'done' 2024-03-13T19:38:24,645 Source in /tmp/pip-wheel-_lkx02_z/detelpy_f16619c10a2045dabda400628fbb008b has version 0.1.10, which satisfies requirement detelpy==0.1.10 from https://files.pythonhosted.org/packages/da/15/b001bf1bfa816d98945ee7b1e44f5784a66133665c960057fb2d8e7c312e/deTELpy-0.1.10.tar.gz 2024-03-13T19:38:24,646 Removed detelpy==0.1.10 from https://files.pythonhosted.org/packages/da/15/b001bf1bfa816d98945ee7b1e44f5784a66133665c960057fb2d8e7c312e/deTELpy-0.1.10.tar.gz from build tracker '/tmp/pip-build-tracker-wxr9dh5d' 2024-03-13T19:38:24,653 Created temporary directory: /tmp/pip-unpack-qefs7f56 2024-03-13T19:38:24,654 Created temporary directory: /tmp/pip-unpack-48b7w_mr 2024-03-13T19:38:24,680 Building wheels for collected packages: detelpy 2024-03-13T19:38:24,685 Created temporary directory: /tmp/pip-wheel-pbgofty4 2024-03-13T19:38:24,686 Building wheel for detelpy (setup.py): started 2024-03-13T19:38:24,687 Destination directory: /tmp/pip-wheel-pbgofty4 2024-03-13T19:38:24,688 Running command python setup.py bdist_wheel 2024-03-13T19:38:25,731 running bdist_wheel 2024-03-13T19:38:25,834 running build 2024-03-13T19:38:25,835 running build_py 2024-03-13T19:38:25,862 creating build 2024-03-13T19:38:25,863 creating build/lib 2024-03-13T19:38:25,864 creating build/lib/deTEL 2024-03-13T19:38:25,865 copying deTEL/exceptions.py -> build/lib/deTEL 2024-03-13T19:38:25,867 copying deTEL/gui.py -> build/lib/deTEL 2024-03-13T19:38:25,870 copying deTEL/__init__.py -> build/lib/deTEL 2024-03-13T19:38:25,871 copying deTEL/__main__.py -> build/lib/deTEL 2024-03-13T19:38:25,874 creating build/lib/deTEL/eTEL 2024-03-13T19:38:25,875 copying deTEL/eTEL/__init__.py -> build/lib/deTEL/eTEL 2024-03-13T19:38:25,877 creating build/lib/deTEL/eTEL/workflow 2024-03-13T19:38:25,878 copying deTEL/eTEL/workflow/__init__.py -> build/lib/deTEL/eTEL/workflow 2024-03-13T19:38:25,880 copying deTEL/eTEL/workflow/utils.py -> build/lib/deTEL/eTEL/workflow 2024-03-13T19:38:25,882 copying deTEL/eTEL/workflow/eTEL.py -> build/lib/deTEL/eTEL/workflow 2024-03-13T19:38:25,887 copying deTEL/eTEL/workflow/extract_peptides.py -> build/lib/deTEL/eTEL/workflow 2024-03-13T19:38:25,889 copying deTEL/eTEL/workflow/substitution_report.py -> build/lib/deTEL/eTEL/workflow 2024-03-13T19:38:25,891 copying deTEL/eTEL/workflow/global_report.py -> build/lib/deTEL/eTEL/workflow 2024-03-13T19:38:25,894 copying deTEL/eTEL/workflow/dataset_report.py -> build/lib/deTEL/eTEL/workflow 2024-03-13T19:38:25,897 creating build/lib/deTEL/mTEL 2024-03-13T19:38:25,898 copying deTEL/mTEL/__init__.py -> build/lib/deTEL/mTEL 2024-03-13T19:38:25,900 copying deTEL/mTEL/mcmc.py -> build/lib/deTEL/mTEL 2024-03-13T19:38:25,902 copying deTEL/mTEL/mtem.py -> build/lib/deTEL/mTEL 2024-03-13T19:38:25,905 copying deTEL/mTEL/data.py -> build/lib/deTEL/mTEL 2024-03-13T19:38:25,907 copying deTEL/mTEL/mTEL.py -> build/lib/deTEL/mTEL 2024-03-13T19:38:25,910 creating build/lib/deTEL/rTEL 2024-03-13T19:38:25,911 copying deTEL/rTEL/__init__.py -> build/lib/deTEL/rTEL 2024-03-13T19:38:25,913 copying deTEL/rTEL/open_search.py -> build/lib/deTEL/rTEL 2024-03-13T19:38:25,918 creating build/lib/utility 2024-03-13T19:38:25,919 copying utility/downloadPRIDE.py -> build/lib/utility 2024-03-13T19:38:25,921 copying utility/prideCrawler.py -> build/lib/utility 2024-03-13T19:38:25,923 running egg_info 2024-03-13T19:38:25,982 writing deTELpy.egg-info/PKG-INFO 2024-03-13T19:38:25,987 writing dependency_links to deTELpy.egg-info/dependency_links.txt 2024-03-13T19:38:25,989 writing requirements to deTELpy.egg-info/requires.txt 2024-03-13T19:38:25,991 writing top-level names to deTELpy.egg-info/top_level.txt 2024-03-13T19:38:26,026 reading manifest file 'deTELpy.egg-info/SOURCES.txt' 2024-03-13T19:38:26,029 adding license file 'LICENSE' 2024-03-13T19:38:26,032 writing manifest file 'deTELpy.egg-info/SOURCES.txt' 2024-03-13T19:38:26,034 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'deTEL.eTEL.workflow.templates' is absent from the `packages` configuration. 2024-03-13T19:38:26,035 !! 2024-03-13T19:38:26,036 ******************************************************************************** 2024-03-13T19:38:26,037 ############################ 2024-03-13T19:38:26,037 # Package would be ignored # 2024-03-13T19:38:26,038 ############################ 2024-03-13T19:38:26,038 Python recognizes 'deTEL.eTEL.workflow.templates' as an importable package[^1], 2024-03-13T19:38:26,039 but it is absent from setuptools' `packages` configuration. 2024-03-13T19:38:26,040 This leads to an ambiguous overall configuration. If you want to distribute this 2024-03-13T19:38:26,040 package, please make sure that 'deTEL.eTEL.workflow.templates' is explicitly added 2024-03-13T19:38:26,041 to the `packages` configuration field. 2024-03-13T19:38:26,042 Alternatively, you can also rely on setuptools' discovery methods 2024-03-13T19:38:26,043 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-03-13T19:38:26,043 instead of `find_packages(...)`/`find:`). 2024-03-13T19:38:26,044 You can read more about "package discovery" on setuptools documentation page: 2024-03-13T19:38:26,045 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-03-13T19:38:26,046 If you don't want 'deTEL.eTEL.workflow.templates' to be distributed and are 2024-03-13T19:38:26,047 already explicitly excluding 'deTEL.eTEL.workflow.templates' via 2024-03-13T19:38:26,047 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-03-13T19:38:26,048 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-03-13T19:38:26,048 combination with a more fine grained `package-data` configuration. 2024-03-13T19:38:26,049 You can read more about "package data files" on setuptools documentation page: 2024-03-13T19:38:26,050 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-03-13T19:38:26,052 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-03-13T19:38:26,052 even if it does not contain any `.py` files. 2024-03-13T19:38:26,053 On the other hand, currently there is no concept of package data 2024-03-13T19:38:26,053 directory, all directories are treated like packages. 2024-03-13T19:38:26,054 ******************************************************************************** 2024-03-13T19:38:26,055 !! 2024-03-13T19:38:26,055 check.warn(importable) 2024-03-13T19:38:26,056 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'deTEL.tRNA_count' is absent from the `packages` configuration. 2024-03-13T19:38:26,056 !! 2024-03-13T19:38:26,057 ******************************************************************************** 2024-03-13T19:38:26,058 ############################ 2024-03-13T19:38:26,058 # Package would be ignored # 2024-03-13T19:38:26,059 ############################ 2024-03-13T19:38:26,059 Python recognizes 'deTEL.tRNA_count' as an importable package[^1], 2024-03-13T19:38:26,060 but it is absent from setuptools' `packages` configuration. 2024-03-13T19:38:26,061 This leads to an ambiguous overall configuration. If you want to distribute this 2024-03-13T19:38:26,062 package, please make sure that 'deTEL.tRNA_count' is explicitly added 2024-03-13T19:38:26,062 to the `packages` configuration field. 2024-03-13T19:38:26,063 Alternatively, you can also rely on setuptools' discovery methods 2024-03-13T19:38:26,063 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-03-13T19:38:26,064 instead of `find_packages(...)`/`find:`). 2024-03-13T19:38:26,065 You can read more about "package discovery" on setuptools documentation page: 2024-03-13T19:38:26,066 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-03-13T19:38:26,067 If you don't want 'deTEL.tRNA_count' to be distributed and are 2024-03-13T19:38:26,068 already explicitly excluding 'deTEL.tRNA_count' via 2024-03-13T19:38:26,068 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-03-13T19:38:26,069 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-03-13T19:38:26,069 combination with a more fine grained `package-data` configuration. 2024-03-13T19:38:26,071 You can read more about "package data files" on setuptools documentation page: 2024-03-13T19:38:26,072 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-03-13T19:38:26,073 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-03-13T19:38:26,074 even if it does not contain any `.py` files. 2024-03-13T19:38:26,075 On the other hand, currently there is no concept of package data 2024-03-13T19:38:26,075 directory, all directories are treated like packages. 2024-03-13T19:38:26,076 ******************************************************************************** 2024-03-13T19:38:26,077 !! 2024-03-13T19:38:26,077 check.warn(importable) 2024-03-13T19:38:26,078 creating build/lib/deTEL/tRNA_count 2024-03-13T19:38:26,078 copying deTEL/tRNA_count/ecoli_tRNA_count.csv -> build/lib/deTEL/tRNA_count 2024-03-13T19:38:26,079 copying deTEL/tRNA_count/yeast_tRNA_count.csv -> build/lib/deTEL/tRNA_count 2024-03-13T19:38:26,079 copying deTEL/eTEL/workflow/danger_mods.csv -> build/lib/deTEL/eTEL/workflow 2024-03-13T19:38:26,080 creating build/lib/deTEL/eTEL/workflow/templates 2024-03-13T19:38:26,080 copying deTEL/eTEL/workflow/templates/substitution_report.html -> build/lib/deTEL/eTEL/workflow/templates 2024-03-13T19:38:26,081 creating build/lib/deTEL/rTEL/configs 2024-03-13T19:38:26,081 copying deTEL/rTEL/configs/crystal-c.params -> build/lib/deTEL/rTEL/configs 2024-03-13T19:38:26,082 copying deTEL/rTEL/configs/open_search.params -> build/lib/deTEL/rTEL/configs 2024-03-13T19:38:26,082 copying deTEL/rTEL/configs/shepherd.config -> build/lib/deTEL/rTEL/configs 2024-03-13T19:38:26,097 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-03-13T19:38:26,097 !! 2024-03-13T19:38:26,098 ******************************************************************************** 2024-03-13T19:38:26,099 Please avoid running ``setup.py`` directly. 2024-03-13T19:38:26,100 Instead, use pypa/build, pypa/installer or other 2024-03-13T19:38:26,100 standards-based tools. 2024-03-13T19:38:26,102 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-03-13T19:38:26,102 ******************************************************************************** 2024-03-13T19:38:26,103 !! 2024-03-13T19:38:26,104 self.initialize_options() 2024-03-13T19:38:26,123 installing to build/bdist.linux-armv7l/wheel 2024-03-13T19:38:26,124 running install 2024-03-13T19:38:26,148 running install_lib 2024-03-13T19:38:26,173 creating build/bdist.linux-armv7l 2024-03-13T19:38:26,175 creating build/bdist.linux-armv7l/wheel 2024-03-13T19:38:26,176 creating build/bdist.linux-armv7l/wheel/utility 2024-03-13T19:38:26,178 copying build/lib/utility/downloadPRIDE.py -> build/bdist.linux-armv7l/wheel/utility 2024-03-13T19:38:26,180 copying build/lib/utility/prideCrawler.py -> build/bdist.linux-armv7l/wheel/utility 2024-03-13T19:38:26,182 creating build/bdist.linux-armv7l/wheel/deTEL 2024-03-13T19:38:26,183 copying build/lib/deTEL/exceptions.py -> build/bdist.linux-armv7l/wheel/deTEL 2024-03-13T19:38:26,186 copying build/lib/deTEL/gui.py -> build/bdist.linux-armv7l/wheel/deTEL 2024-03-13T19:38:26,188 copying build/lib/deTEL/__init__.py -> build/bdist.linux-armv7l/wheel/deTEL 2024-03-13T19:38:26,191 creating build/bdist.linux-armv7l/wheel/deTEL/eTEL 2024-03-13T19:38:26,192 copying build/lib/deTEL/eTEL/__init__.py -> build/bdist.linux-armv7l/wheel/deTEL/eTEL 2024-03-13T19:38:26,194 creating build/bdist.linux-armv7l/wheel/deTEL/eTEL/workflow 2024-03-13T19:38:26,195 copying build/lib/deTEL/eTEL/workflow/danger_mods.csv -> build/bdist.linux-armv7l/wheel/deTEL/eTEL/workflow 2024-03-13T19:38:26,198 copying build/lib/deTEL/eTEL/workflow/__init__.py -> build/bdist.linux-armv7l/wheel/deTEL/eTEL/workflow 2024-03-13T19:38:26,200 copying build/lib/deTEL/eTEL/workflow/utils.py -> build/bdist.linux-armv7l/wheel/deTEL/eTEL/workflow 2024-03-13T19:38:26,202 copying build/lib/deTEL/eTEL/workflow/eTEL.py -> build/bdist.linux-armv7l/wheel/deTEL/eTEL/workflow 2024-03-13T19:38:26,205 copying build/lib/deTEL/eTEL/workflow/extract_peptides.py -> build/bdist.linux-armv7l/wheel/deTEL/eTEL/workflow 2024-03-13T19:38:26,207 copying build/lib/deTEL/eTEL/workflow/substitution_report.py -> build/bdist.linux-armv7l/wheel/deTEL/eTEL/workflow 2024-03-13T19:38:26,209 copying build/lib/deTEL/eTEL/workflow/global_report.py -> build/bdist.linux-armv7l/wheel/deTEL/eTEL/workflow 2024-03-13T19:38:26,212 copying build/lib/deTEL/eTEL/workflow/dataset_report.py -> build/bdist.linux-armv7l/wheel/deTEL/eTEL/workflow 2024-03-13T19:38:26,215 creating build/bdist.linux-armv7l/wheel/deTEL/eTEL/workflow/templates 2024-03-13T19:38:26,215 copying build/lib/deTEL/eTEL/workflow/templates/substitution_report.html -> build/bdist.linux-armv7l/wheel/deTEL/eTEL/workflow/templates 2024-03-13T19:38:26,218 copying build/lib/deTEL/__main__.py -> build/bdist.linux-armv7l/wheel/deTEL 2024-03-13T19:38:26,220 creating build/bdist.linux-armv7l/wheel/deTEL/tRNA_count 2024-03-13T19:38:26,221 copying build/lib/deTEL/tRNA_count/yeast_tRNA_count.csv -> build/bdist.linux-armv7l/wheel/deTEL/tRNA_count 2024-03-13T19:38:26,223 copying build/lib/deTEL/tRNA_count/ecoli_tRNA_count.csv -> build/bdist.linux-armv7l/wheel/deTEL/tRNA_count 2024-03-13T19:38:26,225 creating build/bdist.linux-armv7l/wheel/deTEL/rTEL 2024-03-13T19:38:26,226 creating build/bdist.linux-armv7l/wheel/deTEL/rTEL/configs 2024-03-13T19:38:26,227 copying build/lib/deTEL/rTEL/configs/open_search.params -> build/bdist.linux-armv7l/wheel/deTEL/rTEL/configs 2024-03-13T19:38:26,230 copying build/lib/deTEL/rTEL/configs/crystal-c.params -> build/bdist.linux-armv7l/wheel/deTEL/rTEL/configs 2024-03-13T19:38:26,231 copying build/lib/deTEL/rTEL/configs/shepherd.config -> build/bdist.linux-armv7l/wheel/deTEL/rTEL/configs 2024-03-13T19:38:26,233 copying build/lib/deTEL/rTEL/__init__.py -> build/bdist.linux-armv7l/wheel/deTEL/rTEL 2024-03-13T19:38:26,235 copying build/lib/deTEL/rTEL/open_search.py -> build/bdist.linux-armv7l/wheel/deTEL/rTEL 2024-03-13T19:38:26,239 creating build/bdist.linux-armv7l/wheel/deTEL/mTEL 2024-03-13T19:38:26,240 copying build/lib/deTEL/mTEL/__init__.py -> build/bdist.linux-armv7l/wheel/deTEL/mTEL 2024-03-13T19:38:26,242 copying build/lib/deTEL/mTEL/mcmc.py -> build/bdist.linux-armv7l/wheel/deTEL/mTEL 2024-03-13T19:38:26,244 copying build/lib/deTEL/mTEL/mtem.py -> build/bdist.linux-armv7l/wheel/deTEL/mTEL 2024-03-13T19:38:26,247 copying build/lib/deTEL/mTEL/data.py -> build/bdist.linux-armv7l/wheel/deTEL/mTEL 2024-03-13T19:38:26,250 copying build/lib/deTEL/mTEL/mTEL.py -> build/bdist.linux-armv7l/wheel/deTEL/mTEL 2024-03-13T19:38:26,252 running install_egg_info 2024-03-13T19:38:26,283 Copying deTELpy.egg-info to build/bdist.linux-armv7l/wheel/deTELpy-0.1.10-py3.11.egg-info 2024-03-13T19:38:26,296 running install_scripts 2024-03-13T19:38:26,318 creating build/bdist.linux-armv7l/wheel/deTELpy-0.1.10.dist-info/WHEEL 2024-03-13T19:38:26,320 creating '/tmp/pip-wheel-pbgofty4/deTELpy-0.1.10-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-03-13T19:38:26,322 adding 'deTEL/__init__.py' 2024-03-13T19:38:26,324 adding 'deTEL/__main__.py' 2024-03-13T19:38:26,325 adding 'deTEL/exceptions.py' 2024-03-13T19:38:26,327 adding 'deTEL/gui.py' 2024-03-13T19:38:26,329 adding 'deTEL/eTEL/__init__.py' 2024-03-13T19:38:26,331 adding 'deTEL/eTEL/workflow/__init__.py' 2024-03-13T19:38:26,333 adding 'deTEL/eTEL/workflow/danger_mods.csv' 2024-03-13T19:38:26,335 adding 'deTEL/eTEL/workflow/dataset_report.py' 2024-03-13T19:38:26,338 adding 'deTEL/eTEL/workflow/eTEL.py' 2024-03-13T19:38:26,340 adding 'deTEL/eTEL/workflow/extract_peptides.py' 2024-03-13T19:38:26,343 adding 'deTEL/eTEL/workflow/global_report.py' 2024-03-13T19:38:26,344 adding 'deTEL/eTEL/workflow/substitution_report.py' 2024-03-13T19:38:26,346 adding 'deTEL/eTEL/workflow/utils.py' 2024-03-13T19:38:26,348 adding 'deTEL/eTEL/workflow/templates/substitution_report.html' 2024-03-13T19:38:26,350 adding 'deTEL/mTEL/__init__.py' 2024-03-13T19:38:26,351 adding 'deTEL/mTEL/data.py' 2024-03-13T19:38:26,353 adding 'deTEL/mTEL/mTEL.py' 2024-03-13T19:38:26,355 adding 'deTEL/mTEL/mcmc.py' 2024-03-13T19:38:26,357 adding 'deTEL/mTEL/mtem.py' 2024-03-13T19:38:26,359 adding 'deTEL/rTEL/__init__.py' 2024-03-13T19:38:26,364 adding 'deTEL/rTEL/open_search.py' 2024-03-13T19:38:26,366 adding 'deTEL/rTEL/configs/crystal-c.params' 2024-03-13T19:38:26,368 adding 'deTEL/rTEL/configs/open_search.params' 2024-03-13T19:38:26,369 adding 'deTEL/rTEL/configs/shepherd.config' 2024-03-13T19:38:26,371 adding 'deTEL/tRNA_count/ecoli_tRNA_count.csv' 2024-03-13T19:38:26,372 adding 'deTEL/tRNA_count/yeast_tRNA_count.csv' 2024-03-13T19:38:26,375 adding 'utility/downloadPRIDE.py' 2024-03-13T19:38:26,377 adding 'utility/prideCrawler.py' 2024-03-13T19:38:26,378 adding 'deTELpy-0.1.10.dist-info/LICENSE' 2024-03-13T19:38:26,382 adding 'deTELpy-0.1.10.dist-info/METADATA' 2024-03-13T19:38:26,383 adding 'deTELpy-0.1.10.dist-info/WHEEL' 2024-03-13T19:38:26,384 adding 'deTELpy-0.1.10.dist-info/top_level.txt' 2024-03-13T19:38:26,385 adding 'deTELpy-0.1.10.dist-info/RECORD' 2024-03-13T19:38:26,388 removing build/bdist.linux-armv7l/wheel 2024-03-13T19:38:26,513 Building wheel for detelpy (setup.py): finished with status 'done' 2024-03-13T19:38:26,520 Created wheel for detelpy: filename=deTELpy-0.1.10-py3-none-any.whl size=68769 sha256=011c0c0668c8c5b934e30ec4ff6618e209d4f2b3ca5c40aa747327922b9a8242 2024-03-13T19:38:26,521 Stored in directory: /tmp/pip-ephem-wheel-cache-jbh24dza/wheels/24/1a/2e/0c13522db270b8bc0afe723810a7cbf2d16c2c9c4a98ab4f60 2024-03-13T19:38:26,538 Successfully built detelpy 2024-03-13T19:38:26,546 Removed build tracker: '/tmp/pip-build-tracker-wxr9dh5d'