2024-03-13T19:44:19,972 Created temporary directory: /tmp/pip-build-tracker-7_0z4i7q 2024-03-13T19:44:19,973 Initialized build tracking at /tmp/pip-build-tracker-7_0z4i7q 2024-03-13T19:44:19,974 Created build tracker: /tmp/pip-build-tracker-7_0z4i7q 2024-03-13T19:44:19,974 Entered build tracker: /tmp/pip-build-tracker-7_0z4i7q 2024-03-13T19:44:19,975 Created temporary directory: /tmp/pip-wheel-k62_rdgb 2024-03-13T19:44:19,978 Created temporary directory: /tmp/pip-ephem-wheel-cache-2no6fqo1 2024-03-13T19:44:20,002 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-03-13T19:44:20,006 2 location(s) to search for versions of detelpy: 2024-03-13T19:44:20,006 * https://pypi.org/simple/detelpy/ 2024-03-13T19:44:20,006 * https://www.piwheels.org/simple/detelpy/ 2024-03-13T19:44:20,007 Fetching project page and analyzing links: https://pypi.org/simple/detelpy/ 2024-03-13T19:44:20,007 Getting page https://pypi.org/simple/detelpy/ 2024-03-13T19:44:20,009 Found index url https://pypi.org/simple/ 2024-03-13T19:44:20,143 Fetched page https://pypi.org/simple/detelpy/ as application/vnd.pypi.simple.v1+json 2024-03-13T19:44:20,146 Skipping link: No binaries permitted for detelpy: https://files.pythonhosted.org/packages/db/f9/bc0dbec2a4d6d1475932b7518ac63d64ac81049b434e198db8656ab425bd/deTELpy-0.1.5-py2.py3-none-any.whl (from https://pypi.org/simple/detelpy/) 2024-03-13T19:44:20,146 Found link https://files.pythonhosted.org/packages/22/3f/15466cf4b2595b7246b62925f94053b5eda33ebb45ee42beca9aaac8b019/deTELpy-0.1.5.tar.gz (from https://pypi.org/simple/detelpy/), version: 0.1.5 2024-03-13T19:44:20,147 Skipping link: No binaries permitted for detelpy: https://files.pythonhosted.org/packages/c8/ad/0100ba6927059fc7031a30f462869e66bb536cd6668ede497a9950b38043/deTELpy-0.1.6-py2.py3-none-any.whl (from https://pypi.org/simple/detelpy/) 2024-03-13T19:44:20,148 Found link https://files.pythonhosted.org/packages/50/41/3a6971253ad46bb8ba4fc484b5c5ea980932a318bc54e58690c1bd30d513/deTELpy-0.1.6.tar.gz (from https://pypi.org/simple/detelpy/), version: 0.1.6 2024-03-13T19:44:20,149 Skipping link: No binaries permitted for detelpy: https://files.pythonhosted.org/packages/91/b9/360b31802cd03b5ad0038272aab957f589b15f9303d73e86474d3c7de3cb/deTELpy-0.1.7-py2.py3-none-any.whl (from https://pypi.org/simple/detelpy/) 2024-03-13T19:44:20,149 Found link https://files.pythonhosted.org/packages/d9/4f/2d958b2add4c7a3462560e446377d6ea083c2d44473a6087353a68ae4ac8/deTELpy-0.1.7.tar.gz (from https://pypi.org/simple/detelpy/), version: 0.1.7 2024-03-13T19:44:20,150 Skipping link: No binaries permitted for detelpy: https://files.pythonhosted.org/packages/cd/14/b658611e53e5670ebb7dd44d48877a90956f1d4cbb085a8ddb78acfee2ef/deTELpy-0.1.8-py2.py3-none-any.whl (from https://pypi.org/simple/detelpy/) 2024-03-13T19:44:20,151 Skipping link: No binaries permitted for detelpy: https://files.pythonhosted.org/packages/9f/f6/2066320a2f3bb827a4f0a6b0a0983cb9767929990169b56421cf81fc591a/deTELpy-0.1.10-py3-none-any.whl (from https://pypi.org/simple/detelpy/) 2024-03-13T19:44:20,151 Found link https://files.pythonhosted.org/packages/da/15/b001bf1bfa816d98945ee7b1e44f5784a66133665c960057fb2d8e7c312e/deTELpy-0.1.10.tar.gz (from https://pypi.org/simple/detelpy/), version: 0.1.10 2024-03-13T19:44:20,152 Skipping link: No binaries permitted for detelpy: https://files.pythonhosted.org/packages/aa/db/70cd92ab19021d6c3337a42c9ee73da19ee7b692a643b2af0b1132a1518a/deTELpy-0.1.11-py3-none-any.whl (from https://pypi.org/simple/detelpy/) 2024-03-13T19:44:20,153 Found link https://files.pythonhosted.org/packages/95/5d/310b2a0a17802ed8dbae51df91e3d28952daab43ed1ec78e1258783d88b6/deTELpy-0.1.11.tar.gz (from https://pypi.org/simple/detelpy/), version: 0.1.11 2024-03-13T19:44:20,153 Fetching project page and analyzing links: https://www.piwheels.org/simple/detelpy/ 2024-03-13T19:44:20,154 Getting page https://www.piwheels.org/simple/detelpy/ 2024-03-13T19:44:20,155 Found index url https://www.piwheels.org/simple/ 2024-03-13T19:44:20,317 Fetched page https://www.piwheels.org/simple/detelpy/ as text/html 2024-03-13T19:44:20,319 Skipping link: No binaries permitted for detelpy: https://www.piwheels.org/simple/detelpy/deTELpy-0.1.10-py3-none-any.whl#sha256=011c0c0668c8c5b934e30ec4ff6618e209d4f2b3ca5c40aa747327922b9a8242 (from https://www.piwheels.org/simple/detelpy/) 2024-03-13T19:44:20,320 Skipping link: No binaries permitted for detelpy: https://www.piwheels.org/simple/detelpy/deTELpy-0.1.7-py3-none-any.whl#sha256=7d4b0995054f44d3eb3b3197150cac43d87668932f24dd773e10a231172b0e85 (from https://www.piwheels.org/simple/detelpy/) 2024-03-13T19:44:20,320 Skipping link: No binaries permitted for detelpy: https://www.piwheels.org/simple/detelpy/deTELpy-0.1.6-py3-none-any.whl#sha256=d747c0f23830407fc76e8bfae8db47929cb7f8db69533a8ee60dda7a8736a351 (from https://www.piwheels.org/simple/detelpy/) 2024-03-13T19:44:20,321 Skipping link: No binaries permitted for detelpy: https://www.piwheels.org/simple/detelpy/deTELpy-0.1.5-py3-none-any.whl#sha256=9585ac7384c61d0027fb3069e83ee216a12cf86b69b32d4c5a26d0c9ecbd2bfc (from https://www.piwheels.org/simple/detelpy/) 2024-03-13T19:44:20,321 Skipping link: not a file: https://www.piwheels.org/simple/detelpy/ 2024-03-13T19:44:20,322 Skipping link: not a file: https://pypi.org/simple/detelpy/ 2024-03-13T19:44:20,341 Given no hashes to check 1 links for project 'detelpy': discarding no candidates 2024-03-13T19:44:20,359 Collecting detelpy==0.1.11 2024-03-13T19:44:20,362 Created temporary directory: /tmp/pip-unpack-01aesmnd 2024-03-13T19:44:20,571 Downloading deTELpy-0.1.11.tar.gz (68 kB) 2024-03-13T19:44:21,256 Added detelpy==0.1.11 from https://files.pythonhosted.org/packages/95/5d/310b2a0a17802ed8dbae51df91e3d28952daab43ed1ec78e1258783d88b6/deTELpy-0.1.11.tar.gz to build tracker '/tmp/pip-build-tracker-7_0z4i7q' 2024-03-13T19:44:21,260 Running setup.py (path:/tmp/pip-wheel-k62_rdgb/detelpy_bc0320942ebc4436bcb2452efb91003c/setup.py) egg_info for package detelpy 2024-03-13T19:44:21,262 Created temporary directory: /tmp/pip-pip-egg-info-kbd8_io6 2024-03-13T19:44:21,263 Preparing metadata (setup.py): started 2024-03-13T19:44:21,265 Running command python setup.py egg_info 2024-03-13T19:44:22,398 running egg_info 2024-03-13T19:44:22,399 creating /tmp/pip-pip-egg-info-kbd8_io6/deTELpy.egg-info 2024-03-13T19:44:22,424 writing /tmp/pip-pip-egg-info-kbd8_io6/deTELpy.egg-info/PKG-INFO 2024-03-13T19:44:22,429 writing dependency_links to /tmp/pip-pip-egg-info-kbd8_io6/deTELpy.egg-info/dependency_links.txt 2024-03-13T19:44:22,431 writing requirements to /tmp/pip-pip-egg-info-kbd8_io6/deTELpy.egg-info/requires.txt 2024-03-13T19:44:22,432 writing top-level names to /tmp/pip-pip-egg-info-kbd8_io6/deTELpy.egg-info/top_level.txt 2024-03-13T19:44:22,434 writing manifest file '/tmp/pip-pip-egg-info-kbd8_io6/deTELpy.egg-info/SOURCES.txt' 2024-03-13T19:44:22,525 reading manifest file '/tmp/pip-pip-egg-info-kbd8_io6/deTELpy.egg-info/SOURCES.txt' 2024-03-13T19:44:22,526 adding license file 'LICENSE' 2024-03-13T19:44:22,528 writing manifest file '/tmp/pip-pip-egg-info-kbd8_io6/deTELpy.egg-info/SOURCES.txt' 2024-03-13T19:44:22,637 Preparing metadata (setup.py): finished with status 'done' 2024-03-13T19:44:22,642 Source in /tmp/pip-wheel-k62_rdgb/detelpy_bc0320942ebc4436bcb2452efb91003c has version 0.1.11, which satisfies requirement detelpy==0.1.11 from https://files.pythonhosted.org/packages/95/5d/310b2a0a17802ed8dbae51df91e3d28952daab43ed1ec78e1258783d88b6/deTELpy-0.1.11.tar.gz 2024-03-13T19:44:22,643 Removed detelpy==0.1.11 from https://files.pythonhosted.org/packages/95/5d/310b2a0a17802ed8dbae51df91e3d28952daab43ed1ec78e1258783d88b6/deTELpy-0.1.11.tar.gz from build tracker '/tmp/pip-build-tracker-7_0z4i7q' 2024-03-13T19:44:22,650 Created temporary directory: /tmp/pip-unpack-f_e5cw9v 2024-03-13T19:44:22,651 Created temporary directory: /tmp/pip-unpack-di1ckt8w 2024-03-13T19:44:22,677 Building wheels for collected packages: detelpy 2024-03-13T19:44:22,681 Created temporary directory: /tmp/pip-wheel-1y7y6ma8 2024-03-13T19:44:22,682 Building wheel for detelpy (setup.py): started 2024-03-13T19:44:22,683 Destination directory: /tmp/pip-wheel-1y7y6ma8 2024-03-13T19:44:22,684 Running command python setup.py bdist_wheel 2024-03-13T19:44:24,446 running bdist_wheel 2024-03-13T19:44:24,543 running build 2024-03-13T19:44:24,544 running build_py 2024-03-13T19:44:24,788 creating build 2024-03-13T19:44:24,788 creating build/lib 2024-03-13T19:44:24,789 creating build/lib/deTEL 2024-03-13T19:44:24,790 copying deTEL/exceptions.py -> build/lib/deTEL 2024-03-13T19:44:24,792 copying deTEL/gui.py -> build/lib/deTEL 2024-03-13T19:44:24,795 copying deTEL/__init__.py -> build/lib/deTEL 2024-03-13T19:44:24,796 copying deTEL/__main__.py -> build/lib/deTEL 2024-03-13T19:44:24,798 creating build/lib/deTEL/eTEL 2024-03-13T19:44:24,799 copying deTEL/eTEL/__init__.py -> build/lib/deTEL/eTEL 2024-03-13T19:44:24,802 creating build/lib/deTEL/eTEL/workflow 2024-03-13T19:44:24,803 copying deTEL/eTEL/workflow/__init__.py -> build/lib/deTEL/eTEL/workflow 2024-03-13T19:44:24,804 copying deTEL/eTEL/workflow/utils.py -> build/lib/deTEL/eTEL/workflow 2024-03-13T19:44:24,806 copying deTEL/eTEL/workflow/eTEL.py -> build/lib/deTEL/eTEL/workflow 2024-03-13T19:44:24,810 copying deTEL/eTEL/workflow/extract_peptides.py -> build/lib/deTEL/eTEL/workflow 2024-03-13T19:44:24,811 copying deTEL/eTEL/workflow/substitution_report.py -> build/lib/deTEL/eTEL/workflow 2024-03-13T19:44:24,813 copying deTEL/eTEL/workflow/global_report.py -> build/lib/deTEL/eTEL/workflow 2024-03-13T19:44:24,817 copying deTEL/eTEL/workflow/dataset_report.py -> build/lib/deTEL/eTEL/workflow 2024-03-13T19:44:24,820 creating build/lib/deTEL/mTEL 2024-03-13T19:44:24,821 copying deTEL/mTEL/__init__.py -> build/lib/deTEL/mTEL 2024-03-13T19:44:24,822 copying deTEL/mTEL/mcmc.py -> build/lib/deTEL/mTEL 2024-03-13T19:44:24,825 copying deTEL/mTEL/mtem.py -> build/lib/deTEL/mTEL 2024-03-13T19:44:24,829 copying deTEL/mTEL/data.py -> build/lib/deTEL/mTEL 2024-03-13T19:44:24,831 copying deTEL/mTEL/mTEL.py -> build/lib/deTEL/mTEL 2024-03-13T19:44:24,834 creating build/lib/deTEL/rTEL 2024-03-13T19:44:24,835 copying deTEL/rTEL/__init__.py -> build/lib/deTEL/rTEL 2024-03-13T19:44:24,837 copying deTEL/rTEL/open_search.py -> build/lib/deTEL/rTEL 2024-03-13T19:44:24,841 creating build/lib/utility 2024-03-13T19:44:24,842 copying utility/downloadPRIDE.py -> build/lib/utility 2024-03-13T19:44:24,844 copying utility/prideCrawler.py -> build/lib/utility 2024-03-13T19:44:24,845 running egg_info 2024-03-13T19:44:24,902 writing deTELpy.egg-info/PKG-INFO 2024-03-13T19:44:24,906 writing dependency_links to deTELpy.egg-info/dependency_links.txt 2024-03-13T19:44:24,908 writing requirements to deTELpy.egg-info/requires.txt 2024-03-13T19:44:24,910 writing top-level names to deTELpy.egg-info/top_level.txt 2024-03-13T19:44:24,945 reading manifest file 'deTELpy.egg-info/SOURCES.txt' 2024-03-13T19:44:24,948 adding license file 'LICENSE' 2024-03-13T19:44:24,951 writing manifest file 'deTELpy.egg-info/SOURCES.txt' 2024-03-13T19:44:24,953 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'deTEL.eTEL.workflow.templates' is absent from the `packages` configuration. 2024-03-13T19:44:24,953 !! 2024-03-13T19:44:24,955 ******************************************************************************** 2024-03-13T19:44:24,955 ############################ 2024-03-13T19:44:24,956 # Package would be ignored # 2024-03-13T19:44:24,956 ############################ 2024-03-13T19:44:24,957 Python recognizes 'deTEL.eTEL.workflow.templates' as an importable package[^1], 2024-03-13T19:44:24,957 but it is absent from setuptools' `packages` configuration. 2024-03-13T19:44:24,959 This leads to an ambiguous overall configuration. If you want to distribute this 2024-03-13T19:44:24,959 package, please make sure that 'deTEL.eTEL.workflow.templates' is explicitly added 2024-03-13T19:44:24,960 to the `packages` configuration field. 2024-03-13T19:44:24,961 Alternatively, you can also rely on setuptools' discovery methods 2024-03-13T19:44:24,961 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-03-13T19:44:24,962 instead of `find_packages(...)`/`find:`). 2024-03-13T19:44:24,963 You can read more about "package discovery" on setuptools documentation page: 2024-03-13T19:44:24,964 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-03-13T19:44:24,964 If you don't want 'deTEL.eTEL.workflow.templates' to be distributed and are 2024-03-13T19:44:24,965 already explicitly excluding 'deTEL.eTEL.workflow.templates' via 2024-03-13T19:44:24,965 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-03-13T19:44:24,966 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-03-13T19:44:24,966 combination with a more fine grained `package-data` configuration. 2024-03-13T19:44:24,967 You can read more about "package data files" on setuptools documentation page: 2024-03-13T19:44:24,968 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-03-13T19:44:24,970 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-03-13T19:44:24,970 even if it does not contain any `.py` files. 2024-03-13T19:44:24,971 On the other hand, currently there is no concept of package data 2024-03-13T19:44:24,971 directory, all directories are treated like packages. 2024-03-13T19:44:24,972 ******************************************************************************** 2024-03-13T19:44:24,973 !! 2024-03-13T19:44:24,973 check.warn(importable) 2024-03-13T19:44:24,973 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'deTEL.tRNA_count' is absent from the `packages` configuration. 2024-03-13T19:44:24,974 !! 2024-03-13T19:44:24,975 ******************************************************************************** 2024-03-13T19:44:24,975 ############################ 2024-03-13T19:44:24,976 # Package would be ignored # 2024-03-13T19:44:24,976 ############################ 2024-03-13T19:44:24,977 Python recognizes 'deTEL.tRNA_count' as an importable package[^1], 2024-03-13T19:44:24,977 but it is absent from setuptools' `packages` configuration. 2024-03-13T19:44:24,978 This leads to an ambiguous overall configuration. If you want to distribute this 2024-03-13T19:44:24,979 package, please make sure that 'deTEL.tRNA_count' is explicitly added 2024-03-13T19:44:24,979 to the `packages` configuration field. 2024-03-13T19:44:24,980 Alternatively, you can also rely on setuptools' discovery methods 2024-03-13T19:44:24,981 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-03-13T19:44:24,981 instead of `find_packages(...)`/`find:`). 2024-03-13T19:44:24,982 You can read more about "package discovery" on setuptools documentation page: 2024-03-13T19:44:24,983 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-03-13T19:44:24,984 If you don't want 'deTEL.tRNA_count' to be distributed and are 2024-03-13T19:44:24,985 already explicitly excluding 'deTEL.tRNA_count' via 2024-03-13T19:44:24,985 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-03-13T19:44:24,986 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-03-13T19:44:24,986 combination with a more fine grained `package-data` configuration. 2024-03-13T19:44:24,987 You can read more about "package data files" on setuptools documentation page: 2024-03-13T19:44:24,988 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-03-13T19:44:24,990 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-03-13T19:44:24,991 even if it does not contain any `.py` files. 2024-03-13T19:44:24,991 On the other hand, currently there is no concept of package data 2024-03-13T19:44:24,992 directory, all directories are treated like packages. 2024-03-13T19:44:24,992 ******************************************************************************** 2024-03-13T19:44:24,993 !! 2024-03-13T19:44:24,993 check.warn(importable) 2024-03-13T19:44:24,994 creating build/lib/deTEL/tRNA_count 2024-03-13T19:44:24,994 copying deTEL/tRNA_count/ecoli_tRNA_count.csv -> build/lib/deTEL/tRNA_count 2024-03-13T19:44:24,995 copying deTEL/tRNA_count/yeast_tRNA_count.csv -> build/lib/deTEL/tRNA_count 2024-03-13T19:44:24,995 copying deTEL/eTEL/workflow/danger_mods.csv -> build/lib/deTEL/eTEL/workflow 2024-03-13T19:44:24,996 creating build/lib/deTEL/eTEL/workflow/templates 2024-03-13T19:44:24,996 copying deTEL/eTEL/workflow/templates/substitution_report.html -> build/lib/deTEL/eTEL/workflow/templates 2024-03-13T19:44:24,997 creating build/lib/deTEL/rTEL/configs 2024-03-13T19:44:24,997 copying deTEL/rTEL/configs/crystal-c.params -> build/lib/deTEL/rTEL/configs 2024-03-13T19:44:24,997 copying deTEL/rTEL/configs/open_search.params -> build/lib/deTEL/rTEL/configs 2024-03-13T19:44:24,998 copying deTEL/rTEL/configs/shepherd.config -> build/lib/deTEL/rTEL/configs 2024-03-13T19:44:25,016 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-03-13T19:44:25,017 !! 2024-03-13T19:44:25,018 ******************************************************************************** 2024-03-13T19:44:25,018 Please avoid running ``setup.py`` directly. 2024-03-13T19:44:25,019 Instead, use pypa/build, pypa/installer or other 2024-03-13T19:44:25,019 standards-based tools. 2024-03-13T19:44:25,020 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-03-13T19:44:25,021 ******************************************************************************** 2024-03-13T19:44:25,022 !! 2024-03-13T19:44:25,023 self.initialize_options() 2024-03-13T19:44:25,042 installing to build/bdist.linux-armv7l/wheel 2024-03-13T19:44:25,043 running install 2024-03-13T19:44:25,067 running install_lib 2024-03-13T19:44:25,092 creating build/bdist.linux-armv7l 2024-03-13T19:44:25,092 creating build/bdist.linux-armv7l/wheel 2024-03-13T19:44:25,094 creating build/bdist.linux-armv7l/wheel/utility 2024-03-13T19:44:25,095 copying build/lib/utility/downloadPRIDE.py -> build/bdist.linux-armv7l/wheel/utility 2024-03-13T19:44:25,097 copying build/lib/utility/prideCrawler.py -> build/bdist.linux-armv7l/wheel/utility 2024-03-13T19:44:25,100 creating build/bdist.linux-armv7l/wheel/deTEL 2024-03-13T19:44:25,101 copying build/lib/deTEL/exceptions.py -> build/bdist.linux-armv7l/wheel/deTEL 2024-03-13T19:44:25,103 copying build/lib/deTEL/gui.py -> build/bdist.linux-armv7l/wheel/deTEL 2024-03-13T19:44:25,106 copying build/lib/deTEL/__init__.py -> build/bdist.linux-armv7l/wheel/deTEL 2024-03-13T19:44:25,108 creating build/bdist.linux-armv7l/wheel/deTEL/eTEL 2024-03-13T19:44:25,109 copying build/lib/deTEL/eTEL/__init__.py -> build/bdist.linux-armv7l/wheel/deTEL/eTEL 2024-03-13T19:44:25,112 creating build/bdist.linux-armv7l/wheel/deTEL/eTEL/workflow 2024-03-13T19:44:25,113 copying build/lib/deTEL/eTEL/workflow/danger_mods.csv -> build/bdist.linux-armv7l/wheel/deTEL/eTEL/workflow 2024-03-13T19:44:25,116 copying build/lib/deTEL/eTEL/workflow/__init__.py -> build/bdist.linux-armv7l/wheel/deTEL/eTEL/workflow 2024-03-13T19:44:25,118 copying build/lib/deTEL/eTEL/workflow/utils.py -> build/bdist.linux-armv7l/wheel/deTEL/eTEL/workflow 2024-03-13T19:44:25,120 copying build/lib/deTEL/eTEL/workflow/eTEL.py -> build/bdist.linux-armv7l/wheel/deTEL/eTEL/workflow 2024-03-13T19:44:25,122 copying build/lib/deTEL/eTEL/workflow/extract_peptides.py -> build/bdist.linux-armv7l/wheel/deTEL/eTEL/workflow 2024-03-13T19:44:25,124 copying build/lib/deTEL/eTEL/workflow/substitution_report.py -> build/bdist.linux-armv7l/wheel/deTEL/eTEL/workflow 2024-03-13T19:44:25,126 copying build/lib/deTEL/eTEL/workflow/global_report.py -> build/bdist.linux-armv7l/wheel/deTEL/eTEL/workflow 2024-03-13T19:44:25,129 copying build/lib/deTEL/eTEL/workflow/dataset_report.py -> build/bdist.linux-armv7l/wheel/deTEL/eTEL/workflow 2024-03-13T19:44:25,131 creating build/bdist.linux-armv7l/wheel/deTEL/eTEL/workflow/templates 2024-03-13T19:44:25,132 copying build/lib/deTEL/eTEL/workflow/templates/substitution_report.html -> build/bdist.linux-armv7l/wheel/deTEL/eTEL/workflow/templates 2024-03-13T19:44:25,134 copying build/lib/deTEL/__main__.py -> build/bdist.linux-armv7l/wheel/deTEL 2024-03-13T19:44:25,136 creating build/bdist.linux-armv7l/wheel/deTEL/tRNA_count 2024-03-13T19:44:25,137 copying build/lib/deTEL/tRNA_count/yeast_tRNA_count.csv -> build/bdist.linux-armv7l/wheel/deTEL/tRNA_count 2024-03-13T19:44:25,140 copying build/lib/deTEL/tRNA_count/ecoli_tRNA_count.csv -> build/bdist.linux-armv7l/wheel/deTEL/tRNA_count 2024-03-13T19:44:25,142 creating build/bdist.linux-armv7l/wheel/deTEL/rTEL 2024-03-13T19:44:25,143 creating build/bdist.linux-armv7l/wheel/deTEL/rTEL/configs 2024-03-13T19:44:25,144 copying build/lib/deTEL/rTEL/configs/open_search.params -> build/bdist.linux-armv7l/wheel/deTEL/rTEL/configs 2024-03-13T19:44:25,147 copying build/lib/deTEL/rTEL/configs/crystal-c.params -> build/bdist.linux-armv7l/wheel/deTEL/rTEL/configs 2024-03-13T19:44:25,149 copying build/lib/deTEL/rTEL/configs/shepherd.config -> build/bdist.linux-armv7l/wheel/deTEL/rTEL/configs 2024-03-13T19:44:25,151 copying build/lib/deTEL/rTEL/__init__.py -> build/bdist.linux-armv7l/wheel/deTEL/rTEL 2024-03-13T19:44:25,153 copying build/lib/deTEL/rTEL/open_search.py -> build/bdist.linux-armv7l/wheel/deTEL/rTEL 2024-03-13T19:44:25,157 creating build/bdist.linux-armv7l/wheel/deTEL/mTEL 2024-03-13T19:44:25,158 copying build/lib/deTEL/mTEL/__init__.py -> build/bdist.linux-armv7l/wheel/deTEL/mTEL 2024-03-13T19:44:25,160 copying build/lib/deTEL/mTEL/mcmc.py -> build/bdist.linux-armv7l/wheel/deTEL/mTEL 2024-03-13T19:44:25,163 copying build/lib/deTEL/mTEL/mtem.py -> build/bdist.linux-armv7l/wheel/deTEL/mTEL 2024-03-13T19:44:25,166 copying build/lib/deTEL/mTEL/data.py -> build/bdist.linux-armv7l/wheel/deTEL/mTEL 2024-03-13T19:44:25,168 copying build/lib/deTEL/mTEL/mTEL.py -> build/bdist.linux-armv7l/wheel/deTEL/mTEL 2024-03-13T19:44:25,170 running install_egg_info 2024-03-13T19:44:25,202 Copying deTELpy.egg-info to build/bdist.linux-armv7l/wheel/deTELpy-0.1.11-py3.11.egg-info 2024-03-13T19:44:25,212 running install_scripts 2024-03-13T19:44:25,235 creating build/bdist.linux-armv7l/wheel/deTELpy-0.1.11.dist-info/WHEEL 2024-03-13T19:44:25,239 creating '/tmp/pip-wheel-1y7y6ma8/deTELpy-0.1.11-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-03-13T19:44:25,242 adding 'deTEL/__init__.py' 2024-03-13T19:44:25,244 adding 'deTEL/__main__.py' 2024-03-13T19:44:25,246 adding 'deTEL/exceptions.py' 2024-03-13T19:44:25,248 adding 'deTEL/gui.py' 2024-03-13T19:44:25,251 adding 'deTEL/eTEL/__init__.py' 2024-03-13T19:44:25,254 adding 'deTEL/eTEL/workflow/__init__.py' 2024-03-13T19:44:25,257 adding 'deTEL/eTEL/workflow/danger_mods.csv' 2024-03-13T19:44:25,259 adding 'deTEL/eTEL/workflow/dataset_report.py' 2024-03-13T19:44:25,263 adding 'deTEL/eTEL/workflow/eTEL.py' 2024-03-13T19:44:25,265 adding 'deTEL/eTEL/workflow/extract_peptides.py' 2024-03-13T19:44:25,269 adding 'deTEL/eTEL/workflow/global_report.py' 2024-03-13T19:44:25,272 adding 'deTEL/eTEL/workflow/substitution_report.py' 2024-03-13T19:44:25,273 adding 'deTEL/eTEL/workflow/utils.py' 2024-03-13T19:44:25,276 adding 'deTEL/eTEL/workflow/templates/substitution_report.html' 2024-03-13T19:44:25,278 adding 'deTEL/mTEL/__init__.py' 2024-03-13T19:44:25,281 adding 'deTEL/mTEL/data.py' 2024-03-13T19:44:25,283 adding 'deTEL/mTEL/mTEL.py' 2024-03-13T19:44:25,285 adding 'deTEL/mTEL/mcmc.py' 2024-03-13T19:44:25,289 adding 'deTEL/mTEL/mtem.py' 2024-03-13T19:44:25,291 adding 'deTEL/rTEL/__init__.py' 2024-03-13T19:44:25,297 adding 'deTEL/rTEL/open_search.py' 2024-03-13T19:44:25,300 adding 'deTEL/rTEL/configs/crystal-c.params' 2024-03-13T19:44:25,302 adding 'deTEL/rTEL/configs/open_search.params' 2024-03-13T19:44:25,304 adding 'deTEL/rTEL/configs/shepherd.config' 2024-03-13T19:44:25,306 adding 'deTEL/tRNA_count/ecoli_tRNA_count.csv' 2024-03-13T19:44:25,308 adding 'deTEL/tRNA_count/yeast_tRNA_count.csv' 2024-03-13T19:44:25,312 adding 'utility/downloadPRIDE.py' 2024-03-13T19:44:25,313 adding 'utility/prideCrawler.py' 2024-03-13T19:44:25,315 adding 'deTELpy-0.1.11.dist-info/LICENSE' 2024-03-13T19:44:25,319 adding 'deTELpy-0.1.11.dist-info/METADATA' 2024-03-13T19:44:25,321 adding 'deTELpy-0.1.11.dist-info/WHEEL' 2024-03-13T19:44:25,322 adding 'deTELpy-0.1.11.dist-info/top_level.txt' 2024-03-13T19:44:25,323 adding 'deTELpy-0.1.11.dist-info/RECORD' 2024-03-13T19:44:25,328 removing build/bdist.linux-armv7l/wheel 2024-03-13T19:44:25,452 Building wheel for detelpy (setup.py): finished with status 'done' 2024-03-13T19:44:25,456 Created wheel for detelpy: filename=deTELpy-0.1.11-py3-none-any.whl size=67815 sha256=f8073ffb49f0fc26e6d0b6c55a206436da5a368bb9ae48e3c5df8da55bd91b91 2024-03-13T19:44:25,457 Stored in directory: /tmp/pip-ephem-wheel-cache-2no6fqo1/wheels/24/d3/ea/048ed23e6f645efbdd84ef8859c9ecebe4561890f195a1b945 2024-03-13T19:44:25,472 Successfully built detelpy 2024-03-13T19:44:25,477 Removed build tracker: '/tmp/pip-build-tracker-7_0z4i7q'