2024-03-19T20:30:58,446 Created temporary directory: /tmp/pip-build-tracker-5u86qek1
2024-03-19T20:30:58,448 Initialized build tracking at /tmp/pip-build-tracker-5u86qek1
2024-03-19T20:30:58,448 Created build tracker: /tmp/pip-build-tracker-5u86qek1
2024-03-19T20:30:58,449 Entered build tracker: /tmp/pip-build-tracker-5u86qek1
2024-03-19T20:30:58,450 Created temporary directory: /tmp/pip-wheel-2x3olj1s
2024-03-19T20:30:58,453 Created temporary directory: /tmp/pip-ephem-wheel-cache-5m2fophl
2024-03-19T20:30:58,475 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-03-19T20:30:58,478 2 location(s) to search for versions of uta-align:
2024-03-19T20:30:58,478 * https://pypi.org/simple/uta-align/
2024-03-19T20:30:58,478 * https://www.piwheels.org/simple/uta-align/
2024-03-19T20:30:58,479 Fetching project page and analyzing links: https://pypi.org/simple/uta-align/
2024-03-19T20:30:58,480 Getting page https://pypi.org/simple/uta-align/
2024-03-19T20:30:58,481 Found index url https://pypi.org/simple/
2024-03-19T20:30:58,708 Fetched page https://pypi.org/simple/uta-align/ as application/vnd.pypi.simple.v1+json
2024-03-19T20:30:58,714   Found link https://files.pythonhosted.org/packages/60/a2/47df4fbbbf9800199f0b9363ba2b02c7f234d074ad2693d09cb499a18b2f/uta-align-0.0.1dev-c749ca8b22a0.tar.gz (from https://pypi.org/simple/uta-align/), version: 0.0.1dev-c749ca8b22a0
2024-03-19T20:30:58,715   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/08/ed/16116fd416d69101c3cda7290be8a3a4f82f9d3c9e7902c783633ed78f21/uta_align-0.0.1dev_c749ca8b22a0-py2.7-linux-x86_64.egg (from https://pypi.org/simple/uta-align/)
2024-03-19T20:30:58,716   Found link https://files.pythonhosted.org/packages/c5/c4/e4c65f29cdbcec6ec0269ae305bba6b2a228ff67699de315154dcda99f68/uta-align-0.1.0.tar.gz (from https://pypi.org/simple/uta-align/), version: 0.1.0
2024-03-19T20:30:58,716   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/66/50/0cf3cc125b6ba7ad99012bedf436c15e56cdf19c677edd4d25f24c51cfe2/uta_align-0.1.0-py2.7-linux-x86_64.egg (from https://pypi.org/simple/uta-align/)
2024-03-19T20:30:58,717   Found link https://files.pythonhosted.org/packages/f5/7f/c7c7d3043fa52fe7d6c8d3a870409f9cc9126ca11c113ca05bcd889a123d/uta-align-0.1.2.tar.gz (from https://pypi.org/simple/uta-align/), version: 0.1.2
2024-03-19T20:30:58,718   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/fe/38/a811e7ea2cfa3d1447302b1e0bf650a6b7394c85a308416ae9acbde5c0b9/uta_align-0.1.2-py2.7-linux-x86_64.egg (from https://pypi.org/simple/uta-align/)
2024-03-19T20:30:58,718   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/c8/ef/d709856489d8883fa96dfa2732a7cdf33a2b6eb7319e2d8f245e1fbe299a/uta_align-0.1.4-py2.7-linux-x86_64.egg (from https://pypi.org/simple/uta-align/)
2024-03-19T20:30:58,719   Found link https://files.pythonhosted.org/packages/4f/98/6c282d715088d99d0e4ad4574bd7ae06ae0157f9b4c94843bf215a2b13fd/uta-align-0.1.5.tar.gz (from https://pypi.org/simple/uta-align/), version: 0.1.5
2024-03-19T20:30:58,720   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/d3/86/7a17a92e6730db93d570dde8d4f6ed2ebde235a4a2b1067fe41aa73e6d56/uta_align-0.1.5-py2.7-linux-x86_64.egg (from https://pypi.org/simple/uta-align/)
2024-03-19T20:30:58,720   Found link https://files.pythonhosted.org/packages/20/a0/944d267127f1cc2b188f8afbc3684232ebd576ccad97cec399179f29ada3/uta-align-0.1.6.tar.gz (from https://pypi.org/simple/uta-align/), version: 0.1.6
2024-03-19T20:30:58,721   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/8a/79/ab5ccbbf4854c8dc038871306dccb76e18680581267e876528f829089b6a/uta_align-0.1.6-py2.7-linux-x86_64.egg (from https://pypi.org/simple/uta-align/)
2024-03-19T20:30:58,722   Found link https://files.pythonhosted.org/packages/42/c0/9999b551deffc63c27066cffdac0c2bdd6413d3741b775a6f0441ce82c94/uta-align-0.1.7.tar.gz (from https://pypi.org/simple/uta-align/), version: 0.1.7
2024-03-19T20:30:58,722   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/8a/fc/a620e23d04f03f60881831b48f4e05e3fbd8b8cd9c797b06245f7783d8b4/uta_align-0.1.7-py2.7-linux-x86_64.egg (from https://pypi.org/simple/uta-align/)
2024-03-19T20:30:58,723   Found link https://files.pythonhosted.org/packages/f1/f2/ae2c44e1009a4c94be0a228a17ba41327cbb14ca4d205b9d30a6d03907e0/uta-align-0.1.8.tar.gz (from https://pypi.org/simple/uta-align/), version: 0.1.8
2024-03-19T20:30:58,724   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/0a/e1/dfb0593828e024c1a8c1b40539a892d613a52221deec59e1916e6271c49d/uta_align-0.1.8-py2.7-linux-x86_64.egg (from https://pypi.org/simple/uta-align/)
2024-03-19T20:30:58,724   Found link https://files.pythonhosted.org/packages/53/9a/f8e1cab0dc5e7f59277cad128fcead3897c03c74c743b6ef05927a49914e/uta-align-0.1.9.tar.gz (from https://pypi.org/simple/uta-align/), version: 0.1.9
2024-03-19T20:30:58,725   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/12/b6/bedbe1aa646f76d72de5a2e269b0771d04704ab97be399ebe34a7b4a31ac/uta_align-0.1.9-py2.7-linux-x86_64.egg (from https://pypi.org/simple/uta-align/)
2024-03-19T20:30:58,725   Found link https://files.pythonhosted.org/packages/94/6b/0b73dc6d3391468e9d5229a262129763672296d41f1a26d4f128c66a99dd/uta-align-0.1.10.tar.gz (from https://pypi.org/simple/uta-align/), version: 0.1.10
2024-03-19T20:30:58,726   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/af/ec/2ec104fea2c5ad78e85b77df92d92a77c75fca18b9fd5efe75e970c4d6ed/uta_align-0.1.10-py2.7-linux-x86_64.egg (from https://pypi.org/simple/uta-align/)
2024-03-19T20:30:58,726   Found link https://files.pythonhosted.org/packages/46/1c/47de77a2b89f0339022a5ae5a03f4a919f1afa18d47b5640c3e87c0f5e68/uta-align-0.1.11.tar.gz (from https://pypi.org/simple/uta-align/), version: 0.1.11
2024-03-19T20:30:58,727   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/dd/a7/46496d2d48416e55e45b4f7a77103d53a80f9165552d81ffba27e51ff99b/uta_align-0.1.11-py2.7-linux-x86_64.egg (from https://pypi.org/simple/uta-align/)
2024-03-19T20:30:58,728   Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/0f/7c/ffe50738dd367f7378193f892584392015f4b62aa3ebce7ff721b0cddbc4/uta_align-0.1.11-py3.6-linux-x86_64.egg (from https://pypi.org/simple/uta-align/)
2024-03-19T20:30:58,728   Found link https://files.pythonhosted.org/packages/0f/a2/e6bdd37d746c294c7a6374664078ecf2d34677b52c5267ff0576f669eb15/uta-align-0.2.0a1.tar.gz (from https://pypi.org/simple/uta-align/), version: 0.2.0a1
2024-03-19T20:30:58,729   Found link https://files.pythonhosted.org/packages/7c/07/3d0483101728198e619f9d45552d2d50dc90fc2937964a899e6fe3908687/uta-align-0.2.0a2.tar.gz (from https://pypi.org/simple/uta-align/), version: 0.2.0a2
2024-03-19T20:30:58,730   Found link https://files.pythonhosted.org/packages/d6/4e/c15fb32400d949bcfd2078c9a7ad9944c8f59603e2504e40b6f2a7c79980/uta-align-0.2.0a3.tar.gz (from https://pypi.org/simple/uta-align/), version: 0.2.0a3
2024-03-19T20:30:58,731   Found link https://files.pythonhosted.org/packages/64/bc/5306c731e7d4d304e9d1f7fee2a8fa1d79640626ccaac9f9df660078893c/uta-align-0.2.0.tar.gz (from https://pypi.org/simple/uta-align/), version: 0.2.0
2024-03-19T20:30:58,731   Found link https://files.pythonhosted.org/packages/95/c5/883aa80e54870d4646838c083bfc48f892f0b17999c6ae59f3dd364efa90/uta-align-0.3.0a0.tar.gz (from https://pypi.org/simple/uta-align/), version: 0.3.0a0
2024-03-19T20:30:58,732   Found link https://files.pythonhosted.org/packages/4c/eb/12819f9693b0577aca06c70648619a0a5b10bffa368c64c226471cdb1bd8/uta-align-0.3.0a4.tar.gz (from https://pypi.org/simple/uta-align/) (requires-python:>=3.9), version: 0.3.0a4
2024-03-19T20:30:58,733   Found link https://files.pythonhosted.org/packages/f6/03/56ded4004b41fb7710600127a8f67c647a5295a70abdf40f9a09d605a55d/uta-align-0.3.0a5.tar.gz (from https://pypi.org/simple/uta-align/) (requires-python:>=3.9), version: 0.3.0a5
2024-03-19T20:30:58,734   Found link https://files.pythonhosted.org/packages/d6/b5/00fdbe4f2fb1b734bc5bbc0ae26ae7562b5c202fdd72457d8cf3bdd36b79/uta-align-0.3.0.tar.gz (from https://pypi.org/simple/uta-align/) (requires-python:>=3.9), version: 0.3.0
2024-03-19T20:30:58,736 Fetching project page and analyzing links: https://www.piwheels.org/simple/uta-align/
2024-03-19T20:30:58,736 Getting page https://www.piwheels.org/simple/uta-align/
2024-03-19T20:30:58,738 Found index url https://www.piwheels.org/simple/
2024-03-19T20:30:58,911 Fetched page https://www.piwheels.org/simple/uta-align/ as text/html
2024-03-19T20:30:58,923   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.3.0a5-cp311-cp311-linux_armv6l.whl#sha256=309ace9d1efadd04a97f2bb603a7b92e01e45befbe26d88ec69c1d2edc6de0d2 (from https://www.piwheels.org/simple/uta-align/) (requires-python:>=3.9)
2024-03-19T20:30:58,923   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.3.0a5-cp311-cp311-linux_armv7l.whl#sha256=309ace9d1efadd04a97f2bb603a7b92e01e45befbe26d88ec69c1d2edc6de0d2 (from https://www.piwheels.org/simple/uta-align/) (requires-python:>=3.9)
2024-03-19T20:30:58,924   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.3.0a5-cp39-cp39-linux_armv6l.whl#sha256=da2fba02612890e0e4ec7145b6d882ba415fb27df6379a136fb4b9a1e6dbdebf (from https://www.piwheels.org/simple/uta-align/) (requires-python:>=3.9)
2024-03-19T20:30:58,924   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.3.0a5-cp39-cp39-linux_armv7l.whl#sha256=da2fba02612890e0e4ec7145b6d882ba415fb27df6379a136fb4b9a1e6dbdebf (from https://www.piwheels.org/simple/uta-align/) (requires-python:>=3.9)
2024-03-19T20:30:58,925   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.3.0a4-cp311-cp311-linux_armv6l.whl#sha256=55c053bcb3639f53ac55f28761fc6676766b52e9db33a83d9fdf891e0513cfc3 (from https://www.piwheels.org/simple/uta-align/) (requires-python:>=3.9)
2024-03-19T20:30:58,925   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.3.0a4-cp311-cp311-linux_armv7l.whl#sha256=55c053bcb3639f53ac55f28761fc6676766b52e9db33a83d9fdf891e0513cfc3 (from https://www.piwheels.org/simple/uta-align/) (requires-python:>=3.9)
2024-03-19T20:30:58,926   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.3.0a4-cp39-cp39-linux_armv6l.whl#sha256=95623d57a62ac3ac725c26ba4d646ec86a4b9a592e65808c17a830112d27a179 (from https://www.piwheels.org/simple/uta-align/) (requires-python:>=3.9)
2024-03-19T20:30:58,926   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.3.0a4-cp39-cp39-linux_armv7l.whl#sha256=95623d57a62ac3ac725c26ba4d646ec86a4b9a592e65808c17a830112d27a179 (from https://www.piwheels.org/simple/uta-align/) (requires-python:>=3.9)
2024-03-19T20:30:58,927   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.3.0a0-cp311-cp311-linux_armv6l.whl#sha256=fc65db985e03837e737b03c0a36b910e0cec18b21b731f3a33e84a74149707db (from https://www.piwheels.org/simple/uta-align/)
2024-03-19T20:30:58,927   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.3.0a0-cp311-cp311-linux_armv7l.whl#sha256=fc65db985e03837e737b03c0a36b910e0cec18b21b731f3a33e84a74149707db (from https://www.piwheels.org/simple/uta-align/)
2024-03-19T20:30:58,928   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.3.0a0-cp37-cp37m-linux_armv6l.whl#sha256=364a1ba4e603e17e767fccc392bfb7aef78095000a7b7ab28227147010441d34 (from https://www.piwheels.org/simple/uta-align/)
2024-03-19T20:30:58,928   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.3.0a0-cp37-cp37m-linux_armv7l.whl#sha256=364a1ba4e603e17e767fccc392bfb7aef78095000a7b7ab28227147010441d34 (from https://www.piwheels.org/simple/uta-align/)
2024-03-19T20:30:58,929   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.3.0a0-cp39-cp39-linux_armv6l.whl#sha256=ea88b398d93f9315873ae8e5829936a4ea7757178fe88808b4994bd4f0a84082 (from https://www.piwheels.org/simple/uta-align/)
2024-03-19T20:30:58,930   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.3.0a0-cp39-cp39-linux_armv7l.whl#sha256=ea88b398d93f9315873ae8e5829936a4ea7757178fe88808b4994bd4f0a84082 (from https://www.piwheels.org/simple/uta-align/)
2024-03-19T20:30:58,930   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.2.0-cp35-cp35m-linux_armv6l.whl#sha256=dae4936aefa1312d72056637cd86114fe7343d74171802cfd626b4df74e3fc1e (from https://www.piwheels.org/simple/uta-align/)
2024-03-19T20:30:58,931   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.2.0-cp35-cp35m-linux_armv7l.whl#sha256=dae4936aefa1312d72056637cd86114fe7343d74171802cfd626b4df74e3fc1e (from https://www.piwheels.org/simple/uta-align/)
2024-03-19T20:30:58,931   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.2.0-cp37-cp37m-linux_armv7l.whl#sha256=42d546e097c14adde7bcdc285512044c928ccf557dc96029a4205f3c86f271a3 (from https://www.piwheels.org/simple/uta-align/)
2024-03-19T20:30:58,932   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.2.0-cp37-cp37m-linux_armv6l.whl#sha256=42d546e097c14adde7bcdc285512044c928ccf557dc96029a4205f3c86f271a3 (from https://www.piwheels.org/simple/uta-align/)
2024-03-19T20:30:58,932   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.2.0-cp39-cp39-linux_armv6l.whl#sha256=63c55627e235d6e95ecee14361b3e51f02fc7dbe1257875f66bd870a2d86e251 (from https://www.piwheels.org/simple/uta-align/)
2024-03-19T20:30:58,933   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.2.0-cp39-cp39-linux_armv7l.whl#sha256=63c55627e235d6e95ecee14361b3e51f02fc7dbe1257875f66bd870a2d86e251 (from https://www.piwheels.org/simple/uta-align/)
2024-03-19T20:30:58,934   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.2.0a3-cp35-cp35m-linux_armv6l.whl#sha256=3cb8658cec7e6bb1820937b5b58d040d7bcdafeae9fd8d1d0efe5f32c532e4cf (from https://www.piwheels.org/simple/uta-align/)
2024-03-19T20:30:58,934   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.2.0a3-cp35-cp35m-linux_armv7l.whl#sha256=3cb8658cec7e6bb1820937b5b58d040d7bcdafeae9fd8d1d0efe5f32c532e4cf (from https://www.piwheels.org/simple/uta-align/)
2024-03-19T20:30:58,935   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.2.0a3-cp37-cp37m-linux_armv6l.whl#sha256=b6eb04dfeab677556b95759aee55039d3e8d1bc2a65eaa0b266248cfd5300992 (from https://www.piwheels.org/simple/uta-align/)
2024-03-19T20:30:58,935   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.2.0a3-cp37-cp37m-linux_armv7l.whl#sha256=b6eb04dfeab677556b95759aee55039d3e8d1bc2a65eaa0b266248cfd5300992 (from https://www.piwheels.org/simple/uta-align/)
2024-03-19T20:30:58,936   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.2.0a3-cp39-cp39-linux_armv6l.whl#sha256=f07b67d97fc9a29b300ced5f81b287e6a0fd8638ce93e936705a2c184af86865 (from https://www.piwheels.org/simple/uta-align/)
2024-03-19T20:30:58,936   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.2.0a3-cp39-cp39-linux_armv7l.whl#sha256=f07b67d97fc9a29b300ced5f81b287e6a0fd8638ce93e936705a2c184af86865 (from https://www.piwheels.org/simple/uta-align/)
2024-03-19T20:30:58,937   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.2.0a2-cp35-cp35m-linux_armv7l.whl#sha256=8792ceb53aedebed753c74410a34ed1c5ad088acc434f4527f4158c05e1f6033 (from https://www.piwheels.org/simple/uta-align/)
2024-03-19T20:30:58,938   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.2.0a2-cp35-cp35m-linux_armv6l.whl#sha256=8792ceb53aedebed753c74410a34ed1c5ad088acc434f4527f4158c05e1f6033 (from https://www.piwheels.org/simple/uta-align/)
2024-03-19T20:30:58,938   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.2.0a2-cp37-cp37m-linux_armv6l.whl#sha256=0decd7a6fdbfca278e7d48d0c4365fe413ba471b43c3e9c8ad023bf91157be34 (from https://www.piwheels.org/simple/uta-align/)
2024-03-19T20:30:58,939   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.2.0a2-cp37-cp37m-linux_armv7l.whl#sha256=0decd7a6fdbfca278e7d48d0c4365fe413ba471b43c3e9c8ad023bf91157be34 (from https://www.piwheels.org/simple/uta-align/)
2024-03-19T20:30:58,939   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.2.0a2-cp39-cp39-linux_armv6l.whl#sha256=fc0523694bebe8202661746996848de4787dd23c86aedac17cc56d3958f26d54 (from https://www.piwheels.org/simple/uta-align/)
2024-03-19T20:30:58,940   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.2.0a2-cp39-cp39-linux_armv7l.whl#sha256=fc0523694bebe8202661746996848de4787dd23c86aedac17cc56d3958f26d54 (from https://www.piwheels.org/simple/uta-align/)
2024-03-19T20:30:58,940   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.2.0a1-cp35-cp35m-linux_armv7l.whl#sha256=9557dfb5280a0929438f9a71f5bf321a29ce6a090b4e6242baf364fa80204c54 (from https://www.piwheels.org/simple/uta-align/)
2024-03-19T20:30:58,941   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.2.0a1-cp35-cp35m-linux_armv6l.whl#sha256=9557dfb5280a0929438f9a71f5bf321a29ce6a090b4e6242baf364fa80204c54 (from https://www.piwheels.org/simple/uta-align/)
2024-03-19T20:30:58,941   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.2.0a1-cp37-cp37m-linux_armv7l.whl#sha256=66ebdb1248c86c01cc3714d7c0ec736ebf9c6934dd3ae0c581b54d58d3088331 (from https://www.piwheels.org/simple/uta-align/)
2024-03-19T20:30:58,942   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.2.0a1-cp37-cp37m-linux_armv6l.whl#sha256=66ebdb1248c86c01cc3714d7c0ec736ebf9c6934dd3ae0c581b54d58d3088331 (from https://www.piwheels.org/simple/uta-align/)
2024-03-19T20:30:58,943   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.2.0a1-cp39-cp39-linux_armv6l.whl#sha256=18908072448c5f15e1b8cefb1071b1b6782fe15aca7f97830a79a154fb4d9e19 (from https://www.piwheels.org/simple/uta-align/)
2024-03-19T20:30:58,943   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.2.0a1-cp39-cp39-linux_armv7l.whl#sha256=18908072448c5f15e1b8cefb1071b1b6782fe15aca7f97830a79a154fb4d9e19 (from https://www.piwheels.org/simple/uta-align/)
2024-03-19T20:30:58,944   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.1.11-cp39-cp39-linux_armv6l.whl#sha256=827c85ef70c500f1f1043097ddab023e02a866f3aa00719c37f486bb07bdc76f (from https://www.piwheels.org/simple/uta-align/)
2024-03-19T20:30:58,944   Skipping link: No binaries permitted for uta-align: https://www.piwheels.org/simple/uta-align/uta_align-0.1.11-cp39-cp39-linux_armv7l.whl#sha256=827c85ef70c500f1f1043097ddab023e02a866f3aa00719c37f486bb07bdc76f (from https://www.piwheels.org/simple/uta-align/)
2024-03-19T20:30:58,945 Skipping link: not a file: https://www.piwheels.org/simple/uta-align/
2024-03-19T20:30:58,946 Skipping link: not a file: https://pypi.org/simple/uta-align/
2024-03-19T20:30:58,966 Given no hashes to check 1 links for project 'uta-align': discarding no candidates
2024-03-19T20:30:58,983 Collecting uta-align==0.3.0
2024-03-19T20:30:58,985   Created temporary directory: /tmp/pip-unpack-nqwyyjo0
2024-03-19T20:30:59,354   Downloading uta-align-0.3.0.tar.gz (340 kB)
2024-03-19T20:30:59,629   Added uta-align==0.3.0 from https://files.pythonhosted.org/packages/d6/b5/00fdbe4f2fb1b734bc5bbc0ae26ae7562b5c202fdd72457d8cf3bdd36b79/uta-align-0.3.0.tar.gz to build tracker '/tmp/pip-build-tracker-5u86qek1'
2024-03-19T20:30:59,639   Created temporary directory: /tmp/pip-build-env-bs99v68m
2024-03-19T20:30:59,643   Installing build dependencies: started
2024-03-19T20:30:59,644   Running command pip subprocess to install build dependencies
2024-03-19T20:31:01,283   Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2024-03-19T20:31:01,784   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-03-19T20:31:02,314   Collecting wheel
2024-03-19T20:31:05,782     Using cached https://www.piwheels.org/simple/wheel/wheel-0.43.0-py3-none-any.whl (65 kB)
2024-03-19T20:31:07,880   Collecting Cython~=3.0
2024-03-19T20:31:08,173     Using cached https://www.piwheels.org/simple/cython/Cython-3.0.9-cp311-cp311-linux_armv7l.whl (11.7 MB)
2024-03-19T20:31:10,020   Collecting pysam~=0.22
2024-03-19T20:31:10,213     Downloading https://www.piwheels.org/simple/pysam/pysam-0.22.0-cp311-cp311-linux_armv7l.whl (17.8 MB)
2024-03-19T20:31:29,404        ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 17.8/17.8 MB 908.0 kB/s eta 0:00:00
2024-03-19T20:31:31,243   Collecting setuptools~=69.0
2024-03-19T20:31:31,312     Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.2.0-py3-none-any.whl (821 kB)
2024-03-19T20:31:31,779   Collecting setuptools_scm~=8.0
2024-03-19T20:31:31,800     Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-8.0.4-py3-none-any.whl (42 kB)
2024-03-19T20:31:32,221   Collecting packaging>=20 (from setuptools_scm~=8.0)
2024-03-19T20:31:32,235     Using cached https://www.piwheels.org/simple/packaging/packaging-24.0-py3-none-any.whl (53 kB)
2024-03-19T20:31:32,349   Collecting typing-extensions (from setuptools_scm~=8.0)
2024-03-19T20:31:32,363     Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.10.0-py3-none-any.whl (33 kB)
2024-03-19T20:31:34,873   Installing collected packages: wheel, typing-extensions, setuptools, pysam, packaging, Cython, setuptools_scm
2024-03-19T20:31:35,097     Creating /tmp/pip-build-env-bs99v68m/overlay/local/bin
2024-03-19T20:31:35,100     changing mode of /tmp/pip-build-env-bs99v68m/overlay/local/bin/wheel to 755
2024-03-19T20:31:43,492     changing mode of /tmp/pip-build-env-bs99v68m/overlay/local/bin/cygdb to 755
2024-03-19T20:31:43,494     changing mode of /tmp/pip-build-env-bs99v68m/overlay/local/bin/cython to 755
2024-03-19T20:31:43,496     changing mode of /tmp/pip-build-env-bs99v68m/overlay/local/bin/cythonize to 755
2024-03-19T20:31:43,737   Successfully installed Cython-3.0.9 packaging-24.0 pysam-0.22.0 setuptools-69.2.0 setuptools_scm-8.0.4 typing-extensions-4.10.0 wheel-0.43.0
2024-03-19T20:31:44,370   Installing build dependencies: finished with status 'done'
2024-03-19T20:31:44,374   Getting requirements to build wheel: started
2024-03-19T20:31:44,375   Running command Getting requirements to build wheel
2024-03-19T20:31:52,637   Compiling uta_align/align/algorithms.pyx because it depends on /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/Cython/Includes/posix/types.pxd.
2024-03-19T20:31:52,637   Compiling uta_align/align/cigar_utils.pyx because it depends on /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/Cython/Includes/posix/types.pxd.
2024-03-19T20:31:52,638   [1/2] Cythonizing uta_align/align/algorithms.pyx
2024-03-19T20:31:52,639   [2/2] Cythonizing uta_align/align/cigar_utils.pyx
2024-03-19T20:31:53,050   running egg_info
2024-03-19T20:31:53,056   writing uta_align.egg-info/PKG-INFO
2024-03-19T20:31:53,069   writing dependency_links to uta_align.egg-info/dependency_links.txt
2024-03-19T20:31:53,074   writing requirements to uta_align.egg-info/requires.txt
2024-03-19T20:31:53,075   writing top-level names to uta_align.egg-info/top_level.txt
2024-03-19T20:31:53,097   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/htslib_util.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:53,098   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/bgzf.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:53,099   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/cram.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:53,099   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/faidx.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:53,100   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/hfile.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:53,100   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/hts.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:53,101   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/kstring.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:53,101   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/sam.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:53,102   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/tbx.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:53,103   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/vcf.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:53,103   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/vcfutils.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:53,104   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/pysam_stream.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:53,105   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/htslib_util.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:53,105   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/bgzf.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:53,106   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/cram.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:53,106   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/faidx.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:53,107   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/hfile.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:53,108   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/hts.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:53,108   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/kstring.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:53,109   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/sam.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:53,109   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/tbx.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:53,110   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/vcf.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:53,110   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/vcfutils.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:53,111   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/pysam_stream.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:53,136   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2024-03-19T20:31:53,140   reading manifest file 'uta_align.egg-info/SOURCES.txt'
2024-03-19T20:31:53,145   adding license file 'LICENSE.txt'
2024-03-19T20:31:53,148   writing manifest file 'uta_align.egg-info/SOURCES.txt'
2024-03-19T20:31:53,694   Getting requirements to build wheel: finished with status 'done'
2024-03-19T20:31:53,704   Created temporary directory: /tmp/pip-modern-metadata-xv2a4fig
2024-03-19T20:31:53,706   Preparing metadata (pyproject.toml): started
2024-03-19T20:31:53,707   Running command Preparing metadata (pyproject.toml)
2024-03-19T20:31:56,039   running dist_info
2024-03-19T20:31:56,047   creating /tmp/pip-modern-metadata-xv2a4fig/uta_align.egg-info
2024-03-19T20:31:56,053   writing /tmp/pip-modern-metadata-xv2a4fig/uta_align.egg-info/PKG-INFO
2024-03-19T20:31:56,062   writing dependency_links to /tmp/pip-modern-metadata-xv2a4fig/uta_align.egg-info/dependency_links.txt
2024-03-19T20:31:56,068   writing requirements to /tmp/pip-modern-metadata-xv2a4fig/uta_align.egg-info/requires.txt
2024-03-19T20:31:56,069   writing top-level names to /tmp/pip-modern-metadata-xv2a4fig/uta_align.egg-info/top_level.txt
2024-03-19T20:31:56,071   writing manifest file '/tmp/pip-modern-metadata-xv2a4fig/uta_align.egg-info/SOURCES.txt'
2024-03-19T20:31:56,090   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/htslib_util.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:56,091   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/bgzf.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:56,092   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/cram.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:56,092   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/faidx.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:56,093   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/hfile.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:56,093   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/hts.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:56,094   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/kstring.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:56,095   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/sam.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:56,095   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/tbx.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:56,095   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/vcf.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:56,096   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/vcfutils.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:56,096   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/pysam_stream.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:56,097   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/htslib_util.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:56,097   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/bgzf.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:56,098   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/cram.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:56,098   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/faidx.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:56,099   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/hfile.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:56,099   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/hts.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:56,100   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/kstring.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:56,101   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/sam.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:56,102   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/tbx.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:56,102   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/vcf.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:56,103   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/vcfutils.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:56,103   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/pysam_stream.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:56,126   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2024-03-19T20:31:56,130   reading manifest file '/tmp/pip-modern-metadata-xv2a4fig/uta_align.egg-info/SOURCES.txt'
2024-03-19T20:31:56,132   adding license file 'LICENSE.txt'
2024-03-19T20:31:56,135   writing manifest file '/tmp/pip-modern-metadata-xv2a4fig/uta_align.egg-info/SOURCES.txt'
2024-03-19T20:31:56,136   creating '/tmp/pip-modern-metadata-xv2a4fig/uta_align-0.3.0.dist-info'
2024-03-19T20:31:56,352   Preparing metadata (pyproject.toml): finished with status 'done'
2024-03-19T20:31:56,359   Source in /tmp/pip-wheel-2x3olj1s/uta-align_600e25e783b548589b410599d470f989 has version 0.3.0, which satisfies requirement uta-align==0.3.0 from https://files.pythonhosted.org/packages/d6/b5/00fdbe4f2fb1b734bc5bbc0ae26ae7562b5c202fdd72457d8cf3bdd36b79/uta-align-0.3.0.tar.gz
2024-03-19T20:31:56,360   Removed uta-align==0.3.0 from https://files.pythonhosted.org/packages/d6/b5/00fdbe4f2fb1b734bc5bbc0ae26ae7562b5c202fdd72457d8cf3bdd36b79/uta-align-0.3.0.tar.gz from build tracker '/tmp/pip-build-tracker-5u86qek1'
2024-03-19T20:31:56,369 Created temporary directory: /tmp/pip-unpack-w0kd6hzp
2024-03-19T20:31:56,370 Created temporary directory: /tmp/pip-unpack-agi1w6ki
2024-03-19T20:31:56,422 Building wheels for collected packages: uta-align
2024-03-19T20:31:56,427   Created temporary directory: /tmp/pip-wheel-4i5yunj7
2024-03-19T20:31:56,427   Destination directory: /tmp/pip-wheel-4i5yunj7
2024-03-19T20:31:56,429   Building wheel for uta-align (pyproject.toml): started
2024-03-19T20:31:56,430   Running command Building wheel for uta-align (pyproject.toml)
2024-03-19T20:31:58,688   running bdist_wheel
2024-03-19T20:31:58,714   running build
2024-03-19T20:31:58,715   running build_py
2024-03-19T20:31:58,721   creating build
2024-03-19T20:31:58,721   creating build/lib.linux-armv7l-cpython-311
2024-03-19T20:31:58,722   creating build/lib.linux-armv7l-cpython-311/uta_align
2024-03-19T20:31:58,723   copying uta_align/__init__.py -> build/lib.linux-armv7l-cpython-311/uta_align
2024-03-19T20:31:58,724   running egg_info
2024-03-19T20:31:58,730   writing uta_align.egg-info/PKG-INFO
2024-03-19T20:31:58,739   writing dependency_links to uta_align.egg-info/dependency_links.txt
2024-03-19T20:31:58,743   writing requirements to uta_align.egg-info/requires.txt
2024-03-19T20:31:58,744   writing top-level names to uta_align.egg-info/top_level.txt
2024-03-19T20:31:58,749   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/htslib_util.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:58,750   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/bgzf.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:58,750   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/cram.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:58,751   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/faidx.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:58,751   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/hfile.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:58,752   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/hts.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:58,752   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/kstring.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:58,753   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/sam.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:58,754   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/tbx.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:58,754   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/vcf.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:58,755   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/vcfutils.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:58,755   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/pysam_stream.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:58,756   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/htslib_util.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:58,756   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/bgzf.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:58,757   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/cram.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:58,757   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/faidx.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:58,758   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/hfile.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:58,758   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/hts.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:58,759   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/kstring.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:58,759   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/sam.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:58,760   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/tbx.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:58,761   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/vcf.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:58,761   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/vcfutils.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:58,762   dependency /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/pysam_stream.h won't be automatically included in the manifest: the path must be relative
2024-03-19T20:31:58,776   ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any
2024-03-19T20:31:58,779   reading manifest file 'uta_align.egg-info/SOURCES.txt'
2024-03-19T20:31:58,781   adding license file 'LICENSE.txt'
2024-03-19T20:31:58,784   writing manifest file 'uta_align.egg-info/SOURCES.txt'
2024-03-19T20:31:58,787   /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'uta_align.align' is absent from the `packages` configuration.
2024-03-19T20:31:58,787   !!

2024-03-19T20:31:58,789           ********************************************************************************
2024-03-19T20:31:58,789           ############################
2024-03-19T20:31:58,790           # Package would be ignored #
2024-03-19T20:31:58,790           ############################
2024-03-19T20:31:58,790           Python recognizes 'uta_align.align' as an importable package[^1],
2024-03-19T20:31:58,791           but it is absent from setuptools' `packages` configuration.

2024-03-19T20:31:58,792           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-19T20:31:58,792           package, please make sure that 'uta_align.align' is explicitly added
2024-03-19T20:31:58,792           to the `packages` configuration field.

2024-03-19T20:31:58,793           Alternatively, you can also rely on setuptools' discovery methods
2024-03-19T20:31:58,794           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-19T20:31:58,794           instead of `find_packages(...)`/`find:`).

2024-03-19T20:31:58,795           You can read more about "package discovery" on setuptools documentation page:

2024-03-19T20:31:58,796           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-19T20:31:58,797           If you don't want 'uta_align.align' to be distributed and are
2024-03-19T20:31:58,798           already explicitly excluding 'uta_align.align' via
2024-03-19T20:31:58,799           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-19T20:31:58,801           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-19T20:31:58,802           combination with a more fine grained `package-data` configuration.

2024-03-19T20:31:58,810           You can read more about "package data files" on setuptools documentation page:

2024-03-19T20:31:58,811           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-19T20:31:58,812           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-19T20:31:58,813                 even if it does not contain any `.py` files.
2024-03-19T20:31:58,813                 On the other hand, currently there is no concept of package data
2024-03-19T20:31:58,814                 directory, all directories are treated like packages.
2024-03-19T20:31:58,815           ********************************************************************************

2024-03-19T20:31:58,815   !!
2024-03-19T20:31:58,816     check.warn(importable)
2024-03-19T20:31:58,817   creating build/lib.linux-armv7l-cpython-311/uta_align/align
2024-03-19T20:31:58,817   copying uta_align/align/__init__.py -> build/lib.linux-armv7l-cpython-311/uta_align/align
2024-03-19T20:31:58,818   copying uta_align/align/algorithms.c -> build/lib.linux-armv7l-cpython-311/uta_align/align
2024-03-19T20:31:58,818   copying uta_align/align/algorithms.pyx -> build/lib.linux-armv7l-cpython-311/uta_align/align
2024-03-19T20:31:58,819   copying uta_align/align/cigar_utils.c -> build/lib.linux-armv7l-cpython-311/uta_align/align
2024-03-19T20:31:58,842   copying uta_align/align/cigar_utils.pxd -> build/lib.linux-armv7l-cpython-311/uta_align/align
2024-03-19T20:31:58,844   copying uta_align/align/cigar_utils.pyx -> build/lib.linux-armv7l-cpython-311/uta_align/align
2024-03-19T20:31:58,847   running build_ext
2024-03-19T20:31:58,853   building 'uta_align.align.algorithms' extension
2024-03-19T20:31:58,854   creating build/temp.linux-armv7l-cpython-311
2024-03-19T20:31:58,854   creating build/temp.linux-armv7l-cpython-311/uta_align
2024-03-19T20:31:58,855   creating build/temp.linux-armv7l-cpython-311/uta_align/align
2024-03-19T20:31:58,856   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam -I/tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib -I/tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/samtools -I/usr/include/python3.11 -c uta_align/align/algorithms.c -o build/temp.linux-armv7l-cpython-311/uta_align/align/algorithms.o
2024-03-19T20:31:59,593   uta_align/align/algorithms.c: In function ‘__pyx_pf_9uta_align_5align_10algorithms_8needleman_wunsch_altshul_erikson’:
2024-03-19T20:31:59,606   uta_align/align/algorithms.c:15298:33: warning: comparison of integer expressions of different signedness: ‘int32_t’ {aka ‘int’} and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2024-03-19T20:31:59,607   15298 |   for (__pyx_t_5 = 1; __pyx_t_5 < __pyx_t_4; __pyx_t_5+=1) {
2024-03-19T20:31:59,607         |                                 ^
2024-03-19T20:31:59,620   uta_align/align/algorithms.c:15335:28: warning: comparison of integer expressions of different signedness: ‘int32_t’ {aka ‘int’} and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2024-03-19T20:31:59,620   15335 |     __pyx_t_6 = (__pyx_v_j < __pyx_v_m);
2024-03-19T20:31:59,621         |                            ^
2024-03-19T20:31:59,633   uta_align/align/algorithms.c:15367:33: warning: comparison of integer expressions of different signedness: ‘int32_t’ {aka ‘int’} and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2024-03-19T20:31:59,634   15367 |   for (__pyx_t_5 = 1; __pyx_t_5 < __pyx_t_4; __pyx_t_5+=1) {
2024-03-19T20:31:59,634         |                                 ^
2024-03-19T20:31:59,647   uta_align/align/algorithms.c:15450:28: warning: comparison of integer expressions of different signedness: ‘int32_t’ {aka ‘int’} and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2024-03-19T20:31:59,648   15450 |     __pyx_t_6 = (__pyx_v_i < __pyx_v_n);
2024-03-19T20:31:59,648         |                            ^
2024-03-19T20:31:59,661   uta_align/align/algorithms.c:15481:35: warning: comparison of integer expressions of different signedness: ‘int32_t’ {aka ‘int’} and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2024-03-19T20:31:59,661   15481 |     for (__pyx_t_7 = 1; __pyx_t_7 < __pyx_t_9; __pyx_t_7+=1) {
2024-03-19T20:31:59,662         |                                   ^
2024-03-19T20:32:01,164   In file included from /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/pysam_stream.h:4,
2024-03-19T20:32:01,164                    from uta_align/align/algorithms.c:1269:
2024-03-19T20:32:01,165   /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/pysam_stream.h: At top level:
2024-03-19T20:32:01,166   /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/kseq.h:190:19: warning: ‘kseq_read’ defined but not used [-Wunused-function]
2024-03-19T20:32:01,167     190 |         SCOPE int kseq_read(kseq_t *seq) \
2024-03-19T20:32:01,168         |                   ^~~~~~~~~
2024-03-19T20:32:01,168   /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/kseq.h:244:9: note: in expansion of macro ‘__KSEQ_READ’
2024-03-19T20:32:01,169     244 |         __KSEQ_READ(SCOPE)
2024-03-19T20:32:01,170         |         ^~~~~~~~~~~
2024-03-19T20:32:01,170   /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/kseq.h:246:35: note: in expansion of macro ‘KSEQ_INIT2’
2024-03-19T20:32:01,171     246 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read)
2024-03-19T20:32:01,171         |                                   ^~~~~~~~~~
2024-03-19T20:32:01,172   /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’
2024-03-19T20:32:01,173       9 | KSEQ_INIT(BGZF *, bgzf_read)
2024-03-19T20:32:01,173         | ^~~~~~~~~
2024-03-19T20:32:01,174   /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/kseq.h:174:20: warning: ‘kseq_destroy’ defined but not used [-Wunused-function]
2024-03-19T20:32:01,175     174 |         SCOPE void kseq_destroy(kseq_t *ks)                                                                     \
2024-03-19T20:32:01,176         |                    ^~~~~~~~~~~~
2024-03-19T20:32:01,177   /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/kseq.h:243:9: note: in expansion of macro ‘__KSEQ_BASIC’
2024-03-19T20:32:01,178     243 |         __KSEQ_BASIC(SCOPE, type_t)                                     \
2024-03-19T20:32:01,178         |         ^~~~~~~~~~~~
2024-03-19T20:32:01,179   /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/kseq.h:246:35: note: in expansion of macro ‘KSEQ_INIT2’
2024-03-19T20:32:01,180     246 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read)
2024-03-19T20:32:01,181         |                                   ^~~~~~~~~~
2024-03-19T20:32:01,182   /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’
2024-03-19T20:32:01,182       9 | KSEQ_INIT(BGZF *, bgzf_read)
2024-03-19T20:32:01,183         | ^~~~~~~~~
2024-03-19T20:32:01,183   /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/kseq.h:168:23: warning: ‘kseq_init’ defined but not used [-Wunused-function]
2024-03-19T20:32:01,184     168 |         SCOPE kseq_t *kseq_init(type_t fd)                                                                      \
2024-03-19T20:32:01,184         |                       ^~~~~~~~~
2024-03-19T20:32:01,185   /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/kseq.h:243:9: note: in expansion of macro ‘__KSEQ_BASIC’
2024-03-19T20:32:01,185     243 |         __KSEQ_BASIC(SCOPE, type_t)                                     \
2024-03-19T20:32:01,186         |         ^~~~~~~~~~~~
2024-03-19T20:32:01,187   /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/kseq.h:246:35: note: in expansion of macro ‘KSEQ_INIT2’
2024-03-19T20:32:01,187     246 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read)
2024-03-19T20:32:01,188         |                                   ^~~~~~~~~~
2024-03-19T20:32:01,189   /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’
2024-03-19T20:32:01,190       9 | KSEQ_INIT(BGZF *, bgzf_read)
2024-03-19T20:32:01,190         | ^~~~~~~~~
2024-03-19T20:32:23,145   arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/uta_align/align/algorithms.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/uta_align/align/algorithms.cpython-311-arm-linux-gnueabihf.so
2024-03-19T20:32:23,272   building 'uta_align.align.cigar_utils' extension
2024-03-19T20:32:23,273   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam -I/tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib -I/tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/samtools -I/usr/include/python3.11 -c uta_align/align/cigar_utils.c -o build/temp.linux-armv7l-cpython-311/uta_align/align/cigar_utils.o
2024-03-19T20:32:23,835   In file included from /usr/include/python3.11/Python.h:74,
2024-03-19T20:32:23,836                    from uta_align/align/cigar_utils.c:47:
2024-03-19T20:32:23,837   uta_align/align/cigar_utils.c: In function ‘__pyx_f_9uta_align_5align_11cigar_utils_13CigarSequence__extend_from_cigar_slice’:
2024-03-19T20:32:23,839   uta_align/align/cigar_utils.c:8817:37: warning: passing argument 1 of ‘PySlice_Unpack’ from incompatible pointer type [-Wincompatible-pointer-types]
2024-03-19T20:32:23,840    8817 |   __pyx_t_1 = PySlice_GetIndicesEx(((PySliceObject *)__pyx_v_sliceobj), __pyx_v_other->cigar_len, (&__pyx_v_start), (&__pyx_v_stop), (&__pyx_v_step), (&__pyx_v_slicelen)); if (unlikely(__pyx_t_1 == ((int)-1))) __PYX_ERR(0, 222, __pyx_L1_error)
2024-03-19T20:32:23,841   /usr/include/python3.11/sliceobject.h:51:21: note: in definition of macro ‘PySlice_GetIndicesEx’
2024-03-19T20:32:23,841      51 |     PySlice_Unpack((slice), (start), (stop), (step)) < 0 ?                  \
2024-03-19T20:32:23,842         |                     ^~~~~
2024-03-19T20:32:23,842   /usr/include/python3.11/sliceobject.h:55:42: note: expected ‘PyObject *’ {aka ‘struct _object *’} but argument is of type ‘PySliceObject *’
2024-03-19T20:32:23,843      55 | PyAPI_FUNC(int) PySlice_Unpack(PyObject *slice,
2024-03-19T20:32:23,843         |                                ~~~~~~~~~~^~~~~
2024-03-19T20:32:23,856   uta_align/align/cigar_utils.c: In function ‘__pyx_f_9uta_align_5align_11cigar_utils_13CigarSequence__alloc_buf’:
2024-03-19T20:32:23,865   uta_align/align/cigar_utils.c:9756:44: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘int’} and ‘uint32_t’ {aka ‘unsigned int’} [-Wsign-compare]
2024-03-19T20:32:23,865    9756 |   __pyx_t_1 = (__pyx_v_self->cigar_buf_len < __pyx_v_n);
2024-03-19T20:32:23,866         |                                            ^
2024-03-19T20:32:23,870   uta_align/align/cigar_utils.c: In function ‘__pyx_pf_9uta_align_5align_11cigar_utils_13CigarSequence_6__contains__’:
2024-03-19T20:32:23,878   uta_align/align/cigar_utils.c:10223:62: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2024-03-19T20:32:23,879   10223 |     __pyx_t_6 = (((__pyx_v_self->cigar_buf[__pyx_v_i]) & 15) == __pyx_v_op);
2024-03-19T20:32:23,880         |                                                              ^~
2024-03-19T20:32:23,884   uta_align/align/cigar_utils.c: In function ‘__pyx_f_9uta_align_5align_11cigar_utils_13CigarSequence_count’:
2024-03-19T20:32:23,893   uta_align/align/cigar_utils.c:10395:62: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2024-03-19T20:32:23,894   10395 |     __pyx_t_9 = (((__pyx_v_self->cigar_buf[__pyx_v_i]) & 15) == __pyx_v_op);
2024-03-19T20:32:23,895         |                                                              ^~
2024-03-19T20:32:23,914   uta_align/align/cigar_utils.c: In function ‘__pyx_f_9uta_align_5align_11cigar_utils_13CigarSequence_ref_len’:
2024-03-19T20:32:23,923   uta_align/align/cigar_utils.c:11117:48: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2024-03-19T20:32:23,924   11117 |       __pyx_t_9 = ((__pyx_v_query + __pyx_v_n) >= __pyx_v_query_bases);
2024-03-19T20:32:23,925         |                                                ^~
2024-03-19T20:32:23,934   uta_align/align/cigar_utils.c: In function ‘__pyx_f_9uta_align_5align_11cigar_utils_13CigarSequence_query_len’:
2024-03-19T20:32:23,944   uta_align/align/cigar_utils.c:11610:47: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
2024-03-19T20:32:23,945   11610 |       __pyx_t_10 = ((__pyx_v_ref + __pyx_v_n) >= __pyx_v_ref_bases);
2024-03-19T20:32:23,945         |                                               ^~
2024-03-19T20:32:24,062   uta_align/align/cigar_utils.c: In function ‘__pyx_pf_9uta_align_5align_11cigar_utils_13CigarSequence_38to_string’:
2024-03-19T20:32:24,075   uta_align/align/cigar_utils.c:14778:33: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘Py_ssize_t’ {aka ‘int’} [-Wsign-compare]
2024-03-19T20:32:24,075   14778 |   for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) {
2024-03-19T20:32:24,076         |                                 ^
2024-03-19T20:32:24,089   uta_align/align/cigar_utils.c:14827:33: warning: comparison of integer expressions of different signedness: ‘uint32_t’ {aka ‘unsigned int’} and ‘Py_ssize_t’ {aka ‘int’} [-Wsign-compare]
2024-03-19T20:32:24,089   14827 |   for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) {
2024-03-19T20:32:24,090         |                                 ^
2024-03-19T20:32:25,521   In file included from /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/pysam_stream.h:4,
2024-03-19T20:32:25,521                    from uta_align/align/cigar_utils.c:1268:
2024-03-19T20:32:25,522   /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/pysam_stream.h: At top level:
2024-03-19T20:32:25,522   /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/kseq.h:190:19: warning: ‘kseq_read’ defined but not used [-Wunused-function]
2024-03-19T20:32:25,523     190 |         SCOPE int kseq_read(kseq_t *seq) \
2024-03-19T20:32:25,523         |                   ^~~~~~~~~
2024-03-19T20:32:25,524   /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/kseq.h:244:9: note: in expansion of macro ‘__KSEQ_READ’
2024-03-19T20:32:25,524     244 |         __KSEQ_READ(SCOPE)
2024-03-19T20:32:25,525         |         ^~~~~~~~~~~
2024-03-19T20:32:25,525   /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/kseq.h:246:35: note: in expansion of macro ‘KSEQ_INIT2’
2024-03-19T20:32:25,526     246 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read)
2024-03-19T20:32:25,527         |                                   ^~~~~~~~~~
2024-03-19T20:32:25,527   /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’
2024-03-19T20:32:25,528       9 | KSEQ_INIT(BGZF *, bgzf_read)
2024-03-19T20:32:25,529         | ^~~~~~~~~
2024-03-19T20:32:25,529   /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/kseq.h:174:20: warning: ‘kseq_destroy’ defined but not used [-Wunused-function]
2024-03-19T20:32:25,530     174 |         SCOPE void kseq_destroy(kseq_t *ks)                                                                     \
2024-03-19T20:32:25,531         |                    ^~~~~~~~~~~~
2024-03-19T20:32:25,531   /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/kseq.h:243:9: note: in expansion of macro ‘__KSEQ_BASIC’
2024-03-19T20:32:25,532     243 |         __KSEQ_BASIC(SCOPE, type_t)                                     \
2024-03-19T20:32:25,533         |         ^~~~~~~~~~~~
2024-03-19T20:32:25,533   /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/kseq.h:246:35: note: in expansion of macro ‘KSEQ_INIT2’
2024-03-19T20:32:25,534     246 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read)
2024-03-19T20:32:25,535         |                                   ^~~~~~~~~~
2024-03-19T20:32:25,536   /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’
2024-03-19T20:32:25,536       9 | KSEQ_INIT(BGZF *, bgzf_read)
2024-03-19T20:32:25,538         | ^~~~~~~~~
2024-03-19T20:32:25,538   /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/kseq.h:168:23: warning: ‘kseq_init’ defined but not used [-Wunused-function]
2024-03-19T20:32:25,539     168 |         SCOPE kseq_t *kseq_init(type_t fd)                                                                      \
2024-03-19T20:32:25,540         |                       ^~~~~~~~~
2024-03-19T20:32:25,541   /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/kseq.h:243:9: note: in expansion of macro ‘__KSEQ_BASIC’
2024-03-19T20:32:25,541     243 |         __KSEQ_BASIC(SCOPE, type_t)                                     \
2024-03-19T20:32:25,542         |         ^~~~~~~~~~~~
2024-03-19T20:32:25,543   /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/include/htslib/htslib/kseq.h:246:35: note: in expansion of macro ‘KSEQ_INIT2’
2024-03-19T20:32:25,543     246 | #define KSEQ_INIT(type_t, __read) KSEQ_INIT2(static, type_t, __read)
2024-03-19T20:32:25,544         |                                   ^~~~~~~~~~
2024-03-19T20:32:25,544   /tmp/pip-build-env-bs99v68m/overlay/local/lib/python3.11/dist-packages/pysam/pysam_stream.h:9:1: note: in expansion of macro ‘KSEQ_INIT’
2024-03-19T20:32:25,545       9 | KSEQ_INIT(BGZF *, bgzf_read)
2024-03-19T20:32:25,545         | ^~~~~~~~~
2024-03-19T20:32:47,050   arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/uta_align/align/cigar_utils.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/uta_align/align/cigar_utils.cpython-311-arm-linux-gnueabihf.so
2024-03-19T20:32:47,185   installing to build/bdist.linux-armv7l/wheel
2024-03-19T20:32:47,185   running install
2024-03-19T20:32:47,210   running install_lib
2024-03-19T20:32:47,216   creating build/bdist.linux-armv7l
2024-03-19T20:32:47,217   creating build/bdist.linux-armv7l/wheel
2024-03-19T20:32:47,218   creating build/bdist.linux-armv7l/wheel/uta_align
2024-03-19T20:32:47,220   copying build/lib.linux-armv7l-cpython-311/uta_align/__init__.py -> build/bdist.linux-armv7l/wheel/uta_align
2024-03-19T20:32:47,222   creating build/bdist.linux-armv7l/wheel/uta_align/align
2024-03-19T20:32:47,224   copying build/lib.linux-armv7l-cpython-311/uta_align/align/algorithms.c -> build/bdist.linux-armv7l/wheel/uta_align/align
2024-03-19T20:32:47,241   copying build/lib.linux-armv7l-cpython-311/uta_align/align/cigar_utils.c -> build/bdist.linux-armv7l/wheel/uta_align/align
2024-03-19T20:32:47,263   copying build/lib.linux-armv7l-cpython-311/uta_align/align/cigar_utils.pyx -> build/bdist.linux-armv7l/wheel/uta_align/align
2024-03-19T20:32:47,266   copying build/lib.linux-armv7l-cpython-311/uta_align/align/cigar_utils.pxd -> build/bdist.linux-armv7l/wheel/uta_align/align
2024-03-19T20:32:47,268   copying build/lib.linux-armv7l-cpython-311/uta_align/align/algorithms.pyx -> build/bdist.linux-armv7l/wheel/uta_align/align
2024-03-19T20:32:47,271   copying build/lib.linux-armv7l-cpython-311/uta_align/align/cigar_utils.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/uta_align/align
2024-03-19T20:32:47,284   copying build/lib.linux-armv7l-cpython-311/uta_align/align/__init__.py -> build/bdist.linux-armv7l/wheel/uta_align/align
2024-03-19T20:32:47,286   copying build/lib.linux-armv7l-cpython-311/uta_align/align/algorithms.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/uta_align/align
2024-03-19T20:32:47,302   running install_egg_info
2024-03-19T20:32:47,310   Copying uta_align.egg-info to build/bdist.linux-armv7l/wheel/uta_align-0.3.0-py3.11.egg-info
2024-03-19T20:32:47,320   running install_scripts
2024-03-19T20:32:47,375   creating build/bdist.linux-armv7l/wheel/uta_align-0.3.0.dist-info/WHEEL
2024-03-19T20:32:47,378   creating '/tmp/pip-wheel-4i5yunj7/.tmp-_h9u2ana/uta_align-0.3.0-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-03-19T20:32:47,380   adding 'uta_align/__init__.py'
2024-03-19T20:32:47,383   adding 'uta_align/align/__init__.py'
2024-03-19T20:32:47,461   adding 'uta_align/align/algorithms.c'
2024-03-19T20:32:47,637   adding 'uta_align/align/algorithms.cpython-311-arm-linux-gnueabihf.so'
2024-03-19T20:32:47,647   adding 'uta_align/align/algorithms.pyx'
2024-03-19T20:32:47,722   adding 'uta_align/align/cigar_utils.c'
2024-03-19T20:32:47,902   adding 'uta_align/align/cigar_utils.cpython-311-arm-linux-gnueabihf.so'
2024-03-19T20:32:47,909   adding 'uta_align/align/cigar_utils.pxd'
2024-03-19T20:32:47,912   adding 'uta_align/align/cigar_utils.pyx'
2024-03-19T20:32:47,915   adding 'uta_align-0.3.0.dist-info/LICENSE.txt'
2024-03-19T20:32:47,918   adding 'uta_align-0.3.0.dist-info/METADATA'
2024-03-19T20:32:47,919   adding 'uta_align-0.3.0.dist-info/WHEEL'
2024-03-19T20:32:47,919   adding 'uta_align-0.3.0.dist-info/top_level.txt'
2024-03-19T20:32:47,920   adding 'uta_align-0.3.0.dist-info/RECORD'
2024-03-19T20:32:47,931   removing build/bdist.linux-armv7l/wheel
2024-03-19T20:32:48,118   Building wheel for uta-align (pyproject.toml): finished with status 'done'
2024-03-19T20:32:48,150   Created wheel for uta-align: filename=uta_align-0.3.0-cp311-cp311-linux_armv7l.whl size=986736 sha256=dfabe4d7035543dab5be585907828b56b67a362b12fcd9d8ee0d4617273cf90e
2024-03-19T20:32:48,151   Stored in directory: /tmp/pip-ephem-wheel-cache-5m2fophl/wheels/5a/58/a4/9899dbb226b3eb6801e1ce0c356244b7e17eb29a705406aeca
2024-03-19T20:32:48,168 Successfully built uta-align
2024-03-19T20:32:48,196 Removed build tracker: '/tmp/pip-build-tracker-5u86qek1'