2024-03-23T09:28:25,896 Created temporary directory: /tmp/pip-build-tracker-rfkns33c 2024-03-23T09:28:25,897 Initialized build tracking at /tmp/pip-build-tracker-rfkns33c 2024-03-23T09:28:25,898 Created build tracker: /tmp/pip-build-tracker-rfkns33c 2024-03-23T09:28:25,898 Entered build tracker: /tmp/pip-build-tracker-rfkns33c 2024-03-23T09:28:25,899 Created temporary directory: /tmp/pip-wheel-becutji9 2024-03-23T09:28:25,903 Created temporary directory: /tmp/pip-ephem-wheel-cache-_00edemf 2024-03-23T09:28:25,927 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-03-23T09:28:25,931 2 location(s) to search for versions of rna-fm: 2024-03-23T09:28:25,931 * https://pypi.org/simple/rna-fm/ 2024-03-23T09:28:25,931 * https://www.piwheels.org/simple/rna-fm/ 2024-03-23T09:28:25,932 Fetching project page and analyzing links: https://pypi.org/simple/rna-fm/ 2024-03-23T09:28:25,932 Getting page https://pypi.org/simple/rna-fm/ 2024-03-23T09:28:25,934 Found index url https://pypi.org/simple/ 2024-03-23T09:28:26,149 Fetched page https://pypi.org/simple/rna-fm/ as application/vnd.pypi.simple.v1+json 2024-03-23T09:28:26,152 Found link https://files.pythonhosted.org/packages/9e/51/35430b11dccb5116032abee50a8f12014a6334a0814d437c8685cc0b814f/rna-fm-0.1.0.tar.gz (from https://pypi.org/simple/rna-fm/), version: 0.1.0 2024-03-23T09:28:26,152 Found link https://files.pythonhosted.org/packages/32/33/609fe4bb731c1054d24d92a8e5573b898f5d2b8f8338c69cdf3a885b202f/rna-fm-0.1.2.tar.gz (from https://pypi.org/simple/rna-fm/), version: 0.1.2 2024-03-23T09:28:26,153 Found link https://files.pythonhosted.org/packages/40/2c/e15eadcc21c8cbcf324fb44cddca0f2014a6d1e0b566e2c3f61bee10ad1d/rna-fm-0.2.0.tar.gz (from https://pypi.org/simple/rna-fm/), version: 0.2.0 2024-03-23T09:28:26,154 Skipping link: No binaries permitted for rna-fm: https://files.pythonhosted.org/packages/94/da/d6f9eab6c1211aff033ca5879752219f6dcf83b68c36eee8bb5e04f0c827/rna_fm-0.2.0-py3-none-any.whl (from https://pypi.org/simple/rna-fm/) 2024-03-23T09:28:26,154 Found link https://files.pythonhosted.org/packages/67/36/04fcd112b2ce9b2da3a66d1fb00933491903d24405315d2f5e86599e0df3/rna-fm-0.2.1.tar.gz (from https://pypi.org/simple/rna-fm/), version: 0.2.1 2024-03-23T09:28:26,155 Skipping link: No binaries permitted for rna-fm: https://files.pythonhosted.org/packages/32/e2/ef14f788df7fafb092c6f7abdc552b43ec1069d14387e4d0d0638cad09b2/rna_fm-0.2.1-py3-none-any.whl (from https://pypi.org/simple/rna-fm/) 2024-03-23T09:28:26,155 Found link https://files.pythonhosted.org/packages/8c/25/fb07eb9505144453533c9785d941779b4dc795ff4eca98e09b523b2c8ef3/rna-fm-0.2.2.tar.gz (from https://pypi.org/simple/rna-fm/), version: 0.2.2 2024-03-23T09:28:26,156 Skipping link: No binaries permitted for rna-fm: https://files.pythonhosted.org/packages/0b/1d/7edd5a84a0790e503d773e9872d48323eb53a3f4df70efbc3ad2b413c7f5/rna_fm-0.2.2-py3-none-any.whl (from https://pypi.org/simple/rna-fm/) 2024-03-23T09:28:26,157 Fetching project page and analyzing links: https://www.piwheels.org/simple/rna-fm/ 2024-03-23T09:28:26,157 Getting page https://www.piwheels.org/simple/rna-fm/ 2024-03-23T09:28:26,159 Found index url https://www.piwheels.org/simple/ 2024-03-23T09:28:26,460 Fetched page https://www.piwheels.org/simple/rna-fm/ as text/html 2024-03-23T09:28:26,462 Skipping link: No binaries permitted for rna-fm: https://www.piwheels.org/simple/rna-fm/rna_fm-0.2.1-py3-none-any.whl#sha256=a9c4d2e45a94663e84f67663d3d17d444681cdbe40ac0330671024df5ff112da (from https://www.piwheels.org/simple/rna-fm/) 2024-03-23T09:28:26,463 Skipping link: No binaries permitted for rna-fm: https://www.piwheels.org/simple/rna-fm/rna_fm-0.2.0-py3-none-any.whl#sha256=b5bcaeca67c48ea69865c514c3955626650732f4e1e44ec894a636c4948e24f8 (from https://www.piwheels.org/simple/rna-fm/) 2024-03-23T09:28:26,463 Skipping link: No binaries permitted for rna-fm: https://www.piwheels.org/simple/rna-fm/rna_fm-0.1.2-py3-none-any.whl#sha256=d8e6a21e21d0847d8dbcbcdd2981c7c1604ad5a98595582fd91499a9f15b6065 (from https://www.piwheels.org/simple/rna-fm/) 2024-03-23T09:28:26,464 Skipping link: No binaries permitted for rna-fm: https://www.piwheels.org/simple/rna-fm/rna_fm-0.1.0-py3-none-any.whl#sha256=cd824beb1d2767fbc78d3b06b7bda248f6ba1170804dc04c967b9b0b3b4d5012 (from https://www.piwheels.org/simple/rna-fm/) 2024-03-23T09:28:26,465 Skipping link: not a file: https://www.piwheels.org/simple/rna-fm/ 2024-03-23T09:28:26,466 Skipping link: not a file: https://pypi.org/simple/rna-fm/ 2024-03-23T09:28:26,484 Given no hashes to check 1 links for project 'rna-fm': discarding no candidates 2024-03-23T09:28:26,502 Collecting rna-fm==0.2.2 2024-03-23T09:28:26,504 Created temporary directory: /tmp/pip-unpack-q5o1w2dh 2024-03-23T09:28:26,719 Downloading rna-fm-0.2.2.tar.gz (37 kB) 2024-03-23T09:28:26,815 Added rna-fm==0.2.2 from https://files.pythonhosted.org/packages/8c/25/fb07eb9505144453533c9785d941779b4dc795ff4eca98e09b523b2c8ef3/rna-fm-0.2.2.tar.gz to build tracker '/tmp/pip-build-tracker-rfkns33c' 2024-03-23T09:28:26,817 Running setup.py (path:/tmp/pip-wheel-becutji9/rna-fm_c1af99480f904a2485cf2a22ede25a02/setup.py) egg_info for package rna-fm 2024-03-23T09:28:26,818 Created temporary directory: /tmp/pip-pip-egg-info-j8t2zyjg 2024-03-23T09:28:26,818 Preparing metadata (setup.py): started 2024-03-23T09:28:26,819 Running command python setup.py egg_info 2024-03-23T09:28:27,925 running egg_info 2024-03-23T09:28:27,926 creating /tmp/pip-pip-egg-info-j8t2zyjg/rna_fm.egg-info 2024-03-23T09:28:27,952 writing /tmp/pip-pip-egg-info-j8t2zyjg/rna_fm.egg-info/PKG-INFO 2024-03-23T09:28:27,956 writing dependency_links to /tmp/pip-pip-egg-info-j8t2zyjg/rna_fm.egg-info/dependency_links.txt 2024-03-23T09:28:27,958 writing requirements to /tmp/pip-pip-egg-info-j8t2zyjg/rna_fm.egg-info/requires.txt 2024-03-23T09:28:27,959 writing top-level names to /tmp/pip-pip-egg-info-j8t2zyjg/rna_fm.egg-info/top_level.txt 2024-03-23T09:28:27,961 writing manifest file '/tmp/pip-pip-egg-info-j8t2zyjg/rna_fm.egg-info/SOURCES.txt' 2024-03-23T09:28:28,047 reading manifest file '/tmp/pip-pip-egg-info-j8t2zyjg/rna_fm.egg-info/SOURCES.txt' 2024-03-23T09:28:28,048 adding license file 'LICENSE' 2024-03-23T09:28:28,050 writing manifest file '/tmp/pip-pip-egg-info-j8t2zyjg/rna_fm.egg-info/SOURCES.txt' 2024-03-23T09:28:28,158 Preparing metadata (setup.py): finished with status 'done' 2024-03-23T09:28:28,162 Source in /tmp/pip-wheel-becutji9/rna-fm_c1af99480f904a2485cf2a22ede25a02 has version 0.2.2, which satisfies requirement rna-fm==0.2.2 from https://files.pythonhosted.org/packages/8c/25/fb07eb9505144453533c9785d941779b4dc795ff4eca98e09b523b2c8ef3/rna-fm-0.2.2.tar.gz 2024-03-23T09:28:28,163 Removed rna-fm==0.2.2 from https://files.pythonhosted.org/packages/8c/25/fb07eb9505144453533c9785d941779b4dc795ff4eca98e09b523b2c8ef3/rna-fm-0.2.2.tar.gz from build tracker '/tmp/pip-build-tracker-rfkns33c' 2024-03-23T09:28:28,168 Created temporary directory: /tmp/pip-unpack-3fhf_euz 2024-03-23T09:28:28,170 Created temporary directory: /tmp/pip-unpack-dy_o9riv 2024-03-23T09:28:28,178 Building wheels for collected packages: rna-fm 2024-03-23T09:28:28,183 Created temporary directory: /tmp/pip-wheel-kpgb1z48 2024-03-23T09:28:28,183 Building wheel for rna-fm (setup.py): started 2024-03-23T09:28:28,185 Destination directory: /tmp/pip-wheel-kpgb1z48 2024-03-23T09:28:28,185 Running command python setup.py bdist_wheel 2024-03-23T09:28:29,225 running bdist_wheel 2024-03-23T09:28:29,325 running build 2024-03-23T09:28:29,326 running build_py 2024-03-23T09:28:29,355 creating build 2024-03-23T09:28:29,356 creating build/lib 2024-03-23T09:28:29,357 creating build/lib/fm 2024-03-23T09:28:29,358 copying fm/__init__.py -> build/lib/fm 2024-03-23T09:28:29,360 copying fm/model.py -> build/lib/fm 2024-03-23T09:28:29,364 copying fm/multihead_attention.py -> build/lib/fm 2024-03-23T09:28:29,367 copying fm/modules.py -> build/lib/fm 2024-03-23T09:28:29,369 copying fm/constants.py -> build/lib/fm 2024-03-23T09:28:29,371 copying fm/pretrained.py -> build/lib/fm 2024-03-23T09:28:29,374 copying fm/axial_attention.py -> build/lib/fm 2024-03-23T09:28:29,376 copying fm/data.py -> build/lib/fm 2024-03-23T09:28:29,379 copying fm/version.py -> build/lib/fm 2024-03-23T09:28:29,380 creating build/lib/fm/model 2024-03-23T09:28:29,382 copying fm/model/__init__.py -> build/lib/fm/model 2024-03-23T09:28:29,384 copying fm/model/esm1.py -> build/lib/fm/model 2024-03-23T09:28:29,387 creating build/lib/fm/downstream 2024-03-23T09:28:29,388 copying fm/downstream/__init__.py -> build/lib/fm/downstream 2024-03-23T09:28:29,390 copying fm/downstream/downstream_module.py -> build/lib/fm/downstream 2024-03-23T09:28:29,392 copying fm/downstream/weights_load.py -> build/lib/fm/downstream 2024-03-23T09:28:29,395 copying fm/downstream/baseline.py -> build/lib/fm/downstream 2024-03-23T09:28:29,398 copying fm/downstream/backbones.py -> build/lib/fm/downstream 2024-03-23T09:28:29,400 copying fm/downstream/weights_init.py -> build/lib/fm/downstream 2024-03-23T09:28:29,403 creating build/lib/fm/downstream/pairwise_predictor 2024-03-23T09:28:29,404 copying fm/downstream/pairwise_predictor/__init__.py -> build/lib/fm/downstream/pairwise_predictor 2024-03-23T09:28:29,407 copying fm/downstream/pairwise_predictor/linear_dot_product.py -> build/lib/fm/downstream/pairwise_predictor 2024-03-23T09:28:29,409 copying fm/downstream/pairwise_predictor/pairwise_concat.py -> build/lib/fm/downstream/pairwise_predictor 2024-03-23T09:28:29,442 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-03-23T09:28:29,443 !! 2024-03-23T09:28:29,444 ******************************************************************************** 2024-03-23T09:28:29,445 Please avoid running ``setup.py`` directly. 2024-03-23T09:28:29,445 Instead, use pypa/build, pypa/installer or other 2024-03-23T09:28:29,446 standards-based tools. 2024-03-23T09:28:29,447 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-03-23T09:28:29,448 ******************************************************************************** 2024-03-23T09:28:29,449 !! 2024-03-23T09:28:29,450 self.initialize_options() 2024-03-23T09:28:29,471 installing to build/bdist.linux-armv7l/wheel 2024-03-23T09:28:29,472 running install 2024-03-23T09:28:29,495 running install_lib 2024-03-23T09:28:29,522 creating build/bdist.linux-armv7l 2024-03-23T09:28:29,523 creating build/bdist.linux-armv7l/wheel 2024-03-23T09:28:29,525 creating build/bdist.linux-armv7l/wheel/fm 2024-03-23T09:28:29,526 copying build/lib/fm/__init__.py -> build/bdist.linux-armv7l/wheel/fm 2024-03-23T09:28:29,529 copying build/lib/fm/model.py -> build/bdist.linux-armv7l/wheel/fm 2024-03-23T09:28:29,531 copying build/lib/fm/multihead_attention.py -> build/bdist.linux-armv7l/wheel/fm 2024-03-23T09:28:29,534 copying build/lib/fm/modules.py -> build/bdist.linux-armv7l/wheel/fm 2024-03-23T09:28:29,536 creating build/bdist.linux-armv7l/wheel/fm/model 2024-03-23T09:28:29,537 copying build/lib/fm/model/__init__.py -> build/bdist.linux-armv7l/wheel/fm/model 2024-03-23T09:28:29,539 copying build/lib/fm/model/esm1.py -> build/bdist.linux-armv7l/wheel/fm/model 2024-03-23T09:28:29,541 copying build/lib/fm/constants.py -> build/bdist.linux-armv7l/wheel/fm 2024-03-23T09:28:29,543 copying build/lib/fm/pretrained.py -> build/bdist.linux-armv7l/wheel/fm 2024-03-23T09:28:29,545 copying build/lib/fm/axial_attention.py -> build/bdist.linux-armv7l/wheel/fm 2024-03-23T09:28:29,548 copying build/lib/fm/data.py -> build/bdist.linux-armv7l/wheel/fm 2024-03-23T09:28:29,550 copying build/lib/fm/version.py -> build/bdist.linux-armv7l/wheel/fm 2024-03-23T09:28:29,553 creating build/bdist.linux-armv7l/wheel/fm/downstream 2024-03-23T09:28:29,554 copying build/lib/fm/downstream/__init__.py -> build/bdist.linux-armv7l/wheel/fm/downstream 2024-03-23T09:28:29,557 creating build/bdist.linux-armv7l/wheel/fm/downstream/pairwise_predictor 2024-03-23T09:28:29,558 copying build/lib/fm/downstream/pairwise_predictor/__init__.py -> build/bdist.linux-armv7l/wheel/fm/downstream/pairwise_predictor 2024-03-23T09:28:29,561 copying build/lib/fm/downstream/pairwise_predictor/linear_dot_product.py -> build/bdist.linux-armv7l/wheel/fm/downstream/pairwise_predictor 2024-03-23T09:28:29,563 copying build/lib/fm/downstream/pairwise_predictor/pairwise_concat.py -> build/bdist.linux-armv7l/wheel/fm/downstream/pairwise_predictor 2024-03-23T09:28:29,566 copying build/lib/fm/downstream/downstream_module.py -> build/bdist.linux-armv7l/wheel/fm/downstream 2024-03-23T09:28:29,568 copying build/lib/fm/downstream/weights_load.py -> build/bdist.linux-armv7l/wheel/fm/downstream 2024-03-23T09:28:29,570 copying build/lib/fm/downstream/baseline.py -> build/bdist.linux-armv7l/wheel/fm/downstream 2024-03-23T09:28:29,573 copying build/lib/fm/downstream/backbones.py -> build/bdist.linux-armv7l/wheel/fm/downstream 2024-03-23T09:28:29,574 copying build/lib/fm/downstream/weights_init.py -> build/bdist.linux-armv7l/wheel/fm/downstream 2024-03-23T09:28:29,576 running install_data 2024-03-23T09:28:29,602 creating build/bdist.linux-armv7l/wheel/rna_fm-0.2.2.data 2024-03-23T09:28:29,603 creating build/bdist.linux-armv7l/wheel/rna_fm-0.2.2.data/data 2024-03-23T09:28:29,604 creating build/bdist.linux-armv7l/wheel/rna_fm-0.2.2.data/data/source_docs 2024-03-23T09:28:29,605 creating build/bdist.linux-armv7l/wheel/rna_fm-0.2.2.data/data/source_docs/fm 2024-03-23T09:28:29,608 copying LICENSE -> build/bdist.linux-armv7l/wheel/rna_fm-0.2.2.data/data/source_docs/fm 2024-03-23T09:28:29,611 copying README.md -> build/bdist.linux-armv7l/wheel/rna_fm-0.2.2.data/data/source_docs/fm 2024-03-23T09:28:29,614 running install_egg_info 2024-03-23T09:28:29,681 running egg_info 2024-03-23T09:28:29,711 writing rna_fm.egg-info/PKG-INFO 2024-03-23T09:28:29,716 writing dependency_links to rna_fm.egg-info/dependency_links.txt 2024-03-23T09:28:29,719 writing requirements to rna_fm.egg-info/requires.txt 2024-03-23T09:28:29,722 writing top-level names to rna_fm.egg-info/top_level.txt 2024-03-23T09:28:29,755 reading manifest file 'rna_fm.egg-info/SOURCES.txt' 2024-03-23T09:28:29,757 adding license file 'LICENSE' 2024-03-23T09:28:29,760 writing manifest file 'rna_fm.egg-info/SOURCES.txt' 2024-03-23T09:28:29,762 Copying rna_fm.egg-info to build/bdist.linux-armv7l/wheel/rna_fm-0.2.2-py3.11.egg-info 2024-03-23T09:28:29,775 running install_scripts 2024-03-23T09:28:29,795 creating build/bdist.linux-armv7l/wheel/rna_fm-0.2.2.dist-info/WHEEL 2024-03-23T09:28:29,798 creating '/tmp/pip-wheel-kpgb1z48/rna_fm-0.2.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-03-23T09:28:29,801 adding 'fm/__init__.py' 2024-03-23T09:28:29,803 adding 'fm/axial_attention.py' 2024-03-23T09:28:29,805 adding 'fm/constants.py' 2024-03-23T09:28:29,808 adding 'fm/data.py' 2024-03-23T09:28:29,810 adding 'fm/model.py' 2024-03-23T09:28:29,813 adding 'fm/modules.py' 2024-03-23T09:28:29,816 adding 'fm/multihead_attention.py' 2024-03-23T09:28:29,818 adding 'fm/pretrained.py' 2024-03-23T09:28:29,820 adding 'fm/version.py' 2024-03-23T09:28:29,822 adding 'fm/downstream/__init__.py' 2024-03-23T09:28:29,823 adding 'fm/downstream/backbones.py' 2024-03-23T09:28:29,826 adding 'fm/downstream/baseline.py' 2024-03-23T09:28:29,828 adding 'fm/downstream/downstream_module.py' 2024-03-23T09:28:29,829 adding 'fm/downstream/weights_init.py' 2024-03-23T09:28:29,830 adding 'fm/downstream/weights_load.py' 2024-03-23T09:28:29,833 adding 'fm/downstream/pairwise_predictor/__init__.py' 2024-03-23T09:28:29,834 adding 'fm/downstream/pairwise_predictor/linear_dot_product.py' 2024-03-23T09:28:29,836 adding 'fm/downstream/pairwise_predictor/pairwise_concat.py' 2024-03-23T09:28:29,838 adding 'fm/model/__init__.py' 2024-03-23T09:28:29,840 adding 'fm/model/esm1.py' 2024-03-23T09:28:29,844 adding 'rna_fm-0.2.2.data/data/source_docs/fm/LICENSE' 2024-03-23T09:28:29,847 adding 'rna_fm-0.2.2.data/data/source_docs/fm/README.md' 2024-03-23T09:28:29,851 adding 'rna_fm-0.2.2.dist-info/LICENSE' 2024-03-23T09:28:29,854 adding 'rna_fm-0.2.2.dist-info/METADATA' 2024-03-23T09:28:29,855 adding 'rna_fm-0.2.2.dist-info/WHEEL' 2024-03-23T09:28:29,857 adding 'rna_fm-0.2.2.dist-info/top_level.txt' 2024-03-23T09:28:29,858 adding 'rna_fm-0.2.2.dist-info/zip-safe' 2024-03-23T09:28:29,860 adding 'rna_fm-0.2.2.dist-info/RECORD' 2024-03-23T09:28:29,863 removing build/bdist.linux-armv7l/wheel 2024-03-23T09:28:30,004 Building wheel for rna-fm (setup.py): finished with status 'done' 2024-03-23T09:28:30,007 Created wheel for rna-fm: filename=rna_fm-0.2.2-py3-none-any.whl size=46743 sha256=e0b6c40aee47be94adeb45e0144116b74e29789b30800e4e86bd6171c2902107 2024-03-23T09:28:30,008 Stored in directory: /tmp/pip-ephem-wheel-cache-_00edemf/wheels/77/39/3f/14493f576359e570aa4562a1d64f186bbf643c0304246e767f 2024-03-23T09:28:30,021 Successfully built rna-fm 2024-03-23T09:28:30,027 Removed build tracker: '/tmp/pip-build-tracker-rfkns33c'