2024-03-23T23:25:11,931 Created temporary directory: /tmp/pip-build-tracker-mjyi3rwg
2024-03-23T23:25:11,935 Initialized build tracking at /tmp/pip-build-tracker-mjyi3rwg
2024-03-23T23:25:11,935 Created build tracker: /tmp/pip-build-tracker-mjyi3rwg
2024-03-23T23:25:11,936 Entered build tracker: /tmp/pip-build-tracker-mjyi3rwg
2024-03-23T23:25:11,937 Created temporary directory: /tmp/pip-wheel-tm4gu6di
2024-03-23T23:25:11,947 Created temporary directory: /tmp/pip-ephem-wheel-cache-vqa0lc2_
2024-03-23T23:25:12,002 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-03-23T23:25:12,016 2 location(s) to search for versions of cryodrgn:
2024-03-23T23:25:12,016 * https://pypi.org/simple/cryodrgn/
2024-03-23T23:25:12,016 * https://www.piwheels.org/simple/cryodrgn/
2024-03-23T23:25:12,017 Fetching project page and analyzing links: https://pypi.org/simple/cryodrgn/
2024-03-23T23:25:12,018 Getting page https://pypi.org/simple/cryodrgn/
2024-03-23T23:25:12,022 Found index url https://pypi.org/simple/
2024-03-23T23:25:12,133 Fetched page https://pypi.org/simple/cryodrgn/ as application/vnd.pypi.simple.v1+json
2024-03-23T23:25:12,147   Skipping link: No binaries permitted for cryodrgn: https://files.pythonhosted.org/packages/50/91/1306b78002812cfa9932e2691070f765b75d4385e4bbf559d211a4e71025/cryodrgn-1.1.1-py3-none-any.whl (from https://pypi.org/simple/cryodrgn/) (requires-python:>=3.7)
2024-03-23T23:25:12,149   Found link https://files.pythonhosted.org/packages/24/08/8de601e5f4fe8a5177c4191c0be1848d2952dad0ef149820aadadbee2e08/cryodrgn-1.1.1.tar.gz (from https://pypi.org/simple/cryodrgn/) (requires-python:>=3.7), version: 1.1.1
2024-03-23T23:25:12,149   Skipping link: No binaries permitted for cryodrgn: https://files.pythonhosted.org/packages/e9/78/bdf1fd8d9394a0025206a4d1478b21170d7392e35132522c5ef87855fe73/cryodrgn-2.1.0b5-py3-none-any.whl (from https://pypi.org/simple/cryodrgn/) (requires-python:>=3.7)
2024-03-23T23:25:12,151   Found link https://files.pythonhosted.org/packages/68/26/6669e39abe77e36bd49d1f21f68ed04961bdd0a76f909b497c96ce78b60b/cryodrgn-2.1.0b5.tar.gz (from https://pypi.org/simple/cryodrgn/) (requires-python:>=3.7), version: 2.1.0b5
2024-03-23T23:25:12,151   Skipping link: No binaries permitted for cryodrgn: https://files.pythonhosted.org/packages/7d/d8/dae369c30a1b908f5713f7b46f4948aed0253f9e7e124c98e6c7b15d7e57/cryodrgn-2.2.0b0-py3-none-any.whl (from https://pypi.org/simple/cryodrgn/) (requires-python:>=3.7)
2024-03-23T23:25:12,153   Found link https://files.pythonhosted.org/packages/6f/19/b950e5eb7a6d3c8d122bec56e59c447d3585a660a7605112a5346816014e/cryodrgn-2.2.0b0.tar.gz (from https://pypi.org/simple/cryodrgn/) (requires-python:>=3.7), version: 2.2.0b0
2024-03-23T23:25:12,153   Skipping link: No binaries permitted for cryodrgn: https://files.pythonhosted.org/packages/6d/79/97a3f0118ef0c156bf5eaf931f4a5855a5c5d27dedd04aaa0bcf57fe1f7c/cryodrgn-2.2.0-py3-none-any.whl (from https://pypi.org/simple/cryodrgn/) (requires-python:>=3.7)
2024-03-23T23:25:12,155   Found link https://files.pythonhosted.org/packages/03/50/3259e1a4efc92c945d1ae88fd5765a0ba4db77f0a742fc0e0a206cd781ac/cryodrgn-2.2.0.tar.gz (from https://pypi.org/simple/cryodrgn/) (requires-python:>=3.7), version: 2.2.0
2024-03-23T23:25:12,155   Skipping link: No binaries permitted for cryodrgn: https://files.pythonhosted.org/packages/03/29/f9750c89414937c8700d9d5aa167d9ed1e3157ebb6a9971effb4bcbe8bec/cryodrgn-2.3.0-py3-none-any.whl (from https://pypi.org/simple/cryodrgn/) (requires-python:>=3.7)
2024-03-23T23:25:12,157   Found link https://files.pythonhosted.org/packages/d2/69/c5d8c6da2da86575a985307f67f214a0f56a7f79d73492a5184170ea7036/cryodrgn-2.3.0.tar.gz (from https://pypi.org/simple/cryodrgn/) (requires-python:>=3.7), version: 2.3.0
2024-03-23T23:25:12,157   Skipping link: No binaries permitted for cryodrgn: https://files.pythonhosted.org/packages/08/8d/d0ff2954b5825e3b771a943b40423d57195aec5c30d4b770250ac822c7fe/cryodrgn-3.0.0b0-py3-none-any.whl (from https://pypi.org/simple/cryodrgn/) (requires-python:>=3.7)
2024-03-23T23:25:12,159   Found link https://files.pythonhosted.org/packages/74/92/6ca0ee245ed52438a0f471cfb29de766b9822010f760da08875be946e827/cryodrgn-3.0.0b0.tar.gz (from https://pypi.org/simple/cryodrgn/) (requires-python:>=3.7), version: 3.0.0b0
2024-03-23T23:25:12,159   Skipping link: No binaries permitted for cryodrgn: https://files.pythonhosted.org/packages/ec/e4/6ed8adf3e7b526a69e850b7e5d1b7f6fceede2b3683b35c81944321149a7/cryodrgn-3.0.1b0-py3-none-any.whl (from https://pypi.org/simple/cryodrgn/) (requires-python:>=3.7)
2024-03-23T23:25:12,161   Found link https://files.pythonhosted.org/packages/9d/05/4215fddb0e1cce3525690435efa36cef19ad50c1808b1d48771ea3b7ff37/cryodrgn-3.0.1b0.tar.gz (from https://pypi.org/simple/cryodrgn/) (requires-python:>=3.7), version: 3.0.1b0
2024-03-23T23:25:12,161   Skipping link: No binaries permitted for cryodrgn: https://files.pythonhosted.org/packages/f4/5b/054660b4368ce3eaf45f8301c941cf2e5ee0ba92b1f76dd1503c64d9d156/cryodrgn-3.1.0b0-py3-none-any.whl (from https://pypi.org/simple/cryodrgn/) (requires-python:>=3.7)
2024-03-23T23:25:12,163   Found link https://files.pythonhosted.org/packages/fa/81/02d79980623ec3e72fe0a381ab2953b96b71bcd81937ff54943dd2c85054/cryodrgn-3.1.0b0.tar.gz (from https://pypi.org/simple/cryodrgn/) (requires-python:>=3.7), version: 3.1.0b0
2024-03-23T23:25:12,163   Skipping link: No binaries permitted for cryodrgn: https://files.pythonhosted.org/packages/7b/90/4d4442c4ef959de675c6815995a483c1da8c840ce73da4a2208463548db7/cryodrgn-3.2.0a0-py3-none-any.whl (from https://pypi.org/simple/cryodrgn/) (requires-python:<3.11,>=3.7)
2024-03-23T23:25:12,165   Found link https://files.pythonhosted.org/packages/f2/8b/00d75ab0c8fb63f1bf59c2322d38b3e63c79882cfc9071792af0800b9c8c/cryodrgn-3.2.0a0.tar.gz (from https://pypi.org/simple/cryodrgn/) (requires-python:<3.11,>=3.7), version: 3.2.0a0
2024-03-23T23:25:12,166   Skipping link: No binaries permitted for cryodrgn: https://files.pythonhosted.org/packages/06/24/d655857f07fcb5600f36cec129e365e86492b0a97de029b99f3d83615f5d/cryodrgn-3.2.0a1-py3-none-any.whl (from https://pypi.org/simple/cryodrgn/) (requires-python:<3.11,>=3.7)
2024-03-23T23:25:12,167   Found link https://files.pythonhosted.org/packages/3d/7e/6f69becd5004ad87380939fd7438a730a9a723a76012e918731f58e8355c/cryodrgn-3.2.0a1.tar.gz (from https://pypi.org/simple/cryodrgn/) (requires-python:<3.11,>=3.7), version: 3.2.0a1
2024-03-23T23:25:12,168   Skipping link: No binaries permitted for cryodrgn: https://files.pythonhosted.org/packages/f6/33/67c3f1227b7798d9cade4a14dd8a16aaa0d537531f6e41d9d11b30c2895c/cryodrgn-3.2.0b0-py3-none-any.whl (from https://pypi.org/simple/cryodrgn/) (requires-python:<3.11,>=3.7)
2024-03-23T23:25:12,170   Found link https://files.pythonhosted.org/packages/d8/29/f6b3a3cb3463d56218319de48999e2cc281499e3afa8505f495ac1d4c201/cryodrgn-3.2.0b0.tar.gz (from https://pypi.org/simple/cryodrgn/) (requires-python:<3.11,>=3.7), version: 3.2.0b0
2024-03-23T23:25:12,170   Skipping link: No binaries permitted for cryodrgn: https://files.pythonhosted.org/packages/fe/ef/d8c8d77c2bf45d99401b20e790c767733d30e82e99ffa698327b3f1a81c7/cryodrgn-4.0.0a0-py3-none-any.whl (from https://pypi.org/simple/cryodrgn/) (requires-python:<3.11,>=3.7)
2024-03-23T23:25:12,172   Found link https://files.pythonhosted.org/packages/2e/e9/d5f77d44cd25ad5ed2c6eeee0a0f7a606253b19b159bb4829cadce641e9f/cryodrgn-4.0.0a0.tar.gz (from https://pypi.org/simple/cryodrgn/) (requires-python:<3.11,>=3.7), version: 4.0.0a0
2024-03-23T23:25:12,173 Fetching project page and analyzing links: https://www.piwheels.org/simple/cryodrgn/
2024-03-23T23:25:12,174 Getting page https://www.piwheels.org/simple/cryodrgn/
2024-03-23T23:25:12,176 Found index url https://www.piwheels.org/simple/
2024-03-23T23:25:12,345 Fetched page https://www.piwheels.org/simple/cryodrgn/ as text/html
2024-03-23T23:25:12,354   Skipping link: No binaries permitted for cryodrgn: https://www.piwheels.org/simple/cryodrgn/cryodrgn-3.2.0b0-py3-none-any.whl#sha256=9be035b539a141bdf9a3a5e223ab2d5eac88e2e8342e4fbdf2aa106b91dd220b (from https://www.piwheels.org/simple/cryodrgn/) (requires-python:<3.11,>=3.7)
2024-03-23T23:25:12,355   Skipping link: No binaries permitted for cryodrgn: https://www.piwheels.org/simple/cryodrgn/cryodrgn-3.2.0a0-py3-none-any.whl#sha256=ea2d2f810968f04912365abdce1cf74f011e1b5be2b671a741a705ef827f2d4a (from https://www.piwheels.org/simple/cryodrgn/) (requires-python:<3.11,>=3.7)
2024-03-23T23:25:12,356   Skipping link: No binaries permitted for cryodrgn: https://www.piwheels.org/simple/cryodrgn/cryodrgn-3.1.0b0-py3-none-any.whl#sha256=929d0ff6af693745b3d438a6e7462cc2845e60d49457cd383b6b17b01778017c (from https://www.piwheels.org/simple/cryodrgn/) (requires-python:>=3.7)
2024-03-23T23:25:12,356   Skipping link: No binaries permitted for cryodrgn: https://www.piwheels.org/simple/cryodrgn/cryodrgn-3.0.1b0-py3-none-any.whl#sha256=c5aa67408ca576f776a9b8a331b966eb87343cb2d3713e29768705555e85f930 (from https://www.piwheels.org/simple/cryodrgn/) (requires-python:>=3.7)
2024-03-23T23:25:12,357   Skipping link: No binaries permitted for cryodrgn: https://www.piwheels.org/simple/cryodrgn/cryodrgn-3.0.0b0-py3-none-any.whl#sha256=498fba8644092d42d124e88b81d7209e358d25ea05720b664bd44c454eb221a2 (from https://www.piwheels.org/simple/cryodrgn/) (requires-python:>=3.7)
2024-03-23T23:25:12,357   Skipping link: No binaries permitted for cryodrgn: https://www.piwheels.org/simple/cryodrgn/cryodrgn-2.3.0-py3-none-any.whl#sha256=d3f519ed4819eac7456ccee2c974e41070b80d0e895797cf940ea8b8ca729631 (from https://www.piwheels.org/simple/cryodrgn/) (requires-python:>=3.7)
2024-03-23T23:25:12,358   Skipping link: No binaries permitted for cryodrgn: https://www.piwheels.org/simple/cryodrgn/cryodrgn-2.2.0-py3-none-any.whl#sha256=6d705695a229d236db29c0b847f18e336bc53358ef3bc125cb158bd743f53bc9 (from https://www.piwheels.org/simple/cryodrgn/) (requires-python:>=3.7)
2024-03-23T23:25:12,358   Skipping link: No binaries permitted for cryodrgn: https://www.piwheels.org/simple/cryodrgn/cryodrgn-2.2.0b0-py3-none-any.whl#sha256=ded8ccf2e343961488fc50ee73479e8c5a9bc61dd79a83f509f96e86c01e9306 (from https://www.piwheels.org/simple/cryodrgn/) (requires-python:>=3.7)
2024-03-23T23:25:12,359   Skipping link: No binaries permitted for cryodrgn: https://www.piwheels.org/simple/cryodrgn/cryodrgn-2.1.0b5-py3-none-any.whl#sha256=f43221397e48ac64c02c3009e927ea1212a8ad59ed1e20421a65287c9e853652 (from https://www.piwheels.org/simple/cryodrgn/) (requires-python:>=3.7)
2024-03-23T23:25:12,359   Skipping link: No binaries permitted for cryodrgn: https://www.piwheels.org/simple/cryodrgn/cryodrgn-1.1.1-py3-none-any.whl#sha256=b3cc3928fe1cc0f347265449cd329a61f3b7eadb9f833c26748b681c220cb4ad (from https://www.piwheels.org/simple/cryodrgn/) (requires-python:>=3.7)
2024-03-23T23:25:12,360 Skipping link: not a file: https://www.piwheels.org/simple/cryodrgn/
2024-03-23T23:25:12,360 Skipping link: not a file: https://pypi.org/simple/cryodrgn/
2024-03-23T23:25:12,398 Given no hashes to check 1 links for project 'cryodrgn': discarding no candidates
2024-03-23T23:25:12,429 Collecting cryodrgn==3.2.0a1
2024-03-23T23:25:12,434   Created temporary directory: /tmp/pip-unpack-jfzgeq3l
2024-03-23T23:25:12,701   Downloading cryodrgn-3.2.0a1.tar.gz (36.3 MB)
2024-03-23T23:25:31,686   Added cryodrgn==3.2.0a1 from https://files.pythonhosted.org/packages/3d/7e/6f69becd5004ad87380939fd7438a730a9a723a76012e918731f58e8355c/cryodrgn-3.2.0a1.tar.gz to build tracker '/tmp/pip-build-tracker-mjyi3rwg'
2024-03-23T23:25:31,700   Created temporary directory: /tmp/pip-build-env-p9zb1nbi
2024-03-23T23:25:31,720   Installing build dependencies: started
2024-03-23T23:25:31,723   Running command pip subprocess to install build dependencies
2024-03-23T23:25:34,440   Using pip 24.0 from /usr/local/lib/python3.7/dist-packages/pip (python 3.7)
2024-03-23T23:25:35,611   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-03-23T23:25:37,446     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/b8/49/b3b29c52b09075fb77f69309763a563b4054d5808a3f3b95df3a62ef3d3f/setuptools-68.1.0-py3-none-any.whl (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8)
2024-03-23T23:25:37,449     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/83/b0/18310b45f6eec3757c0554dbc1e03f2f7685c8a87831aea6adc1276faacc/setuptools-68.1.0.tar.gz (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8)
2024-03-23T23:25:37,452     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/4f/ab/0bcfebdfc3bfa8554b2b2c97a555569c4c1ebc74ea288741ea8326c51906/setuptools-68.1.2-py3-none-any.whl (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8)
2024-03-23T23:25:37,455     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/19/20/d8dd9d8becaf3e2d6fdc17cc41870d5ada5ceda518996cf5968c2ca71bd8/setuptools-68.1.2.tar.gz (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8)
2024-03-23T23:25:37,459     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/82/3b/0715493246eb08e93506f4da0efe1d05a3c9d9ac3b76e97cc362890e6adf/setuptools-68.2.0-py3-none-any.whl (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8)
2024-03-23T23:25:37,462     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/ac/e0/4ccbb616e5f30d3595fa44ccc66ba5ac38e68885bcd888916d39f8ba480a/setuptools-68.2.0.tar.gz (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8)
2024-03-23T23:25:37,465     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/95/79/6b47c6a872b40743a480687dc0c79ffb4202710789f3e4d54a84fff8b550/setuptools-68.2.1-py3-none-any.whl (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8)
2024-03-23T23:25:37,468     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/e9/37/c6a6eb1ebeea919e4f394d811f234322d8a99eb58d5ee0f6089dbf06c488/setuptools-68.2.1.tar.gz (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8)
2024-03-23T23:25:37,471     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/bb/26/7945080113158354380a12ce26873dd6c1ebd88d47f5bc24e2c5bb38c16a/setuptools-68.2.2-py3-none-any.whl (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8)
2024-03-23T23:25:37,474     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/ef/cc/93f7213b2ab5ed383f98ce8020e632ef256b406b8569606c3f160ed8e1c9/setuptools-68.2.2.tar.gz (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8)
2024-03-23T23:25:37,477     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/0f/93/daae527a7ad3ea3a4f7d84d05fd74b7cc637360a7e7b4df1df9a5046be17/setuptools-69.0.0-py3-none-any.whl (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8)
2024-03-23T23:25:37,480     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/91/43/4121cf96ed3a2d68d862663552d8044e1d987d716b6a065ab53cd4d4640f/setuptools-69.0.0.tar.gz (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8)
2024-03-23T23:25:37,483     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/f9/59/701df637517d6af0434cbb580bfc35a9c536aa7f47e0c2e222f1ef83547c/setuptools-69.0.1-py3-none-any.whl (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8)
2024-03-23T23:25:37,486     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/fb/d0/d5744a7190a984ab728c7d2bd7e39bae2ff523538b233246fd34e2148566/setuptools-69.0.1.tar.gz (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8)
2024-03-23T23:25:37,489     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/bb/e1/ed2dd0850446b8697ad28d118df885ad04140c64ace06c4bd559f7c8a94f/setuptools-69.0.2-py3-none-any.whl (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8)
2024-03-23T23:25:37,492     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/4b/d9/d0cf66484b7e28a9c42db7e3929caed46f8b80478cd8c9bd38b7be059150/setuptools-69.0.2.tar.gz (from https://pypi.org/simple/setuptools/) (requires-python:>=3.8)
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2024-03-23T23:25:48,257     Link requires a different Python (3.7.3 not in: '>=3.8'): https://www.piwheels.org/simple/importlib-metadata/importlib_metadata-7.0.0-py3-none-any.whl#sha256=86e9f6517d7b24e0907d9288022b3e310a30acad4128caae4fe6a5cbab10c4c7 (from https://www.piwheels.org/simple/importlib-metadata/) (requires-python:>=3.8)
2024-03-23T23:25:48,260     Link requires a different Python (3.7.3 not in: '>=3.8'): https://www.piwheels.org/simple/importlib-metadata/importlib_metadata-6.11.0-py3-none-any.whl#sha256=e4569c20026d0650a751c35a96a3df60b81496dfbe3e9f8f5a449bfe79a4fd20 (from https://www.piwheels.org/simple/importlib-metadata/) (requires-python:>=3.8)
2024-03-23T23:25:48,263     Link requires a different Python (3.7.3 not in: '>=3.8'): https://www.piwheels.org/simple/importlib-metadata/importlib_metadata-6.10.0-py3-none-any.whl#sha256=a80998d2f1e7c7e333680c7284c8ef1b0b0c4df786348782f79087d92fe4270a (from https://www.piwheels.org/simple/importlib-metadata/) (requires-python:>=3.8)
2024-03-23T23:25:48,267     Link requires a different Python (3.7.3 not in: '>=3.8'): https://www.piwheels.org/simple/importlib-metadata/importlib_metadata-6.9.0-py3-none-any.whl#sha256=f32ad35a883eae724e7f2aec6b7c3f177cb3974611ee611bd88e1ccdc16dd21c (from https://www.piwheels.org/simple/importlib-metadata/) (requires-python:>=3.8)
2024-03-23T23:25:48,270     Link requires a different Python (3.7.3 not in: '>=3.8'): https://www.piwheels.org/simple/importlib-metadata/importlib_metadata-6.8.0-py3-none-any.whl#sha256=eee927b02daa5ef8a9da352c7edb8d87e3b0fb0ac03c36ec3b0c16a735819c74 (from https://www.piwheels.org/simple/importlib-metadata/) (requires-python:>=3.8)
2024-03-23T23:25:48,632   Collecting importlib-metadata (from setuptools_scm>=6.2)
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2024-03-23T23:25:49,075     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/a1/3b/385e3b43200af0b9a13d03c234efbd9d40c6d73ab63fde1c097a2daacdea/zipp-3.16.1-py3-none-any.whl (from https://pypi.org/simple/zipp/) (requires-python:>=3.8)
2024-03-23T23:25:49,079     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/ef/76/5a9e1553f00ee55a6de6b3c176aa4c859c7f64b9bbdc48804df174dee890/zipp-3.16.1.tar.gz (from https://pypi.org/simple/zipp/) (requires-python:>=3.8)
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2024-03-23T23:25:49,093     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/58/03/dd5ccf4e06dec9537ecba8fcc67bbd4ea48a2791773e469e73f94c3ba9a6/zipp-3.17.0.tar.gz (from https://pypi.org/simple/zipp/) (requires-python:>=3.8)
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2024-03-23T23:25:49,199     Link requires a different Python (3.7.3 not in: '>=3.8'): https://www.piwheels.org/simple/zipp/zipp-3.18.0-py3-none-any.whl#sha256=c08e21e8e335a7a168cb939929dfdcb1b40c3d7d656e3c72bcc71d78bea38c05 (from https://www.piwheels.org/simple/zipp/) (requires-python:>=3.8)
2024-03-23T23:25:49,203     Link requires a different Python (3.7.3 not in: '>=3.8'): https://www.piwheels.org/simple/zipp/zipp-3.17.0-py3-none-any.whl#sha256=03618401c9ad1f41bd0e471f319f1ee79147a2e38f6bc4566b4de609ab87fe11 (from https://www.piwheels.org/simple/zipp/) (requires-python:>=3.8)
2024-03-23T23:25:49,207     Link requires a different Python (3.7.3 not in: '>=3.8'): https://www.piwheels.org/simple/zipp/zipp-3.16.2-py3-none-any.whl#sha256=ffebb2bccce49efecaa7b6d4d273d64e047c4d0ea72b6f04c05a11a9f49a753d (from https://www.piwheels.org/simple/zipp/) (requires-python:>=3.8)
2024-03-23T23:25:49,211     Link requires a different Python (3.7.3 not in: '>=3.8'): https://www.piwheels.org/simple/zipp/zipp-3.16.1-py3-none-any.whl#sha256=8ba47289cfe5ead30d0cda58334ebb39b0e27609aaa680c24d2323927fd8696e (from https://www.piwheels.org/simple/zipp/) (requires-python:>=3.8)
2024-03-23T23:25:49,215     Link requires a different Python (3.7.3 not in: '>=3.8'): https://www.piwheels.org/simple/zipp/zipp-3.16.0-py3-none-any.whl#sha256=1338e8df1aff24947954617867855699925e8e9e87e75e0853a68fe6cc2b646b (from https://www.piwheels.org/simple/zipp/) (requires-python:>=3.8)
2024-03-23T23:25:49,380   Collecting zipp>=0.5 (from importlib-metadata->setuptools_scm>=6.2)
2024-03-23T23:25:49,430     Using cached https://www.piwheels.org/simple/zipp/zipp-3.15.0-py3-none-any.whl (6.8 kB)
2024-03-23T23:25:54,033   Installing collected packages: zipp, typing-extensions, tomli, setuptools, packaging, importlib-metadata, setuptools_scm
2024-03-23T23:25:59,371   Successfully installed importlib-metadata-6.7.0 packaging-24.0 setuptools-68.0.0 setuptools_scm-7.1.0 tomli-2.0.1 typing-extensions-4.7.1 zipp-3.15.0
2024-03-23T23:26:00,357   Installing build dependencies: finished with status 'done'
2024-03-23T23:26:00,368   Getting requirements to build wheel: started
2024-03-23T23:26:00,370   Running command Getting requirements to build wheel
2024-03-23T23:26:02,546   running egg_info
2024-03-23T23:26:02,560   writing cryodrgn.egg-info/PKG-INFO
2024-03-23T23:26:02,566   writing dependency_links to cryodrgn.egg-info/dependency_links.txt
2024-03-23T23:26:02,570   writing entry points to cryodrgn.egg-info/entry_points.txt
2024-03-23T23:26:02,574   writing requirements to cryodrgn.egg-info/requires.txt
2024-03-23T23:26:02,576   writing top-level names to cryodrgn.egg-info/top_level.txt
2024-03-23T23:26:02,691   /tmp/pip-build-env-p9zb1nbi/overlay/lib/python3.7/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*.
2024-03-23T23:26:02,692     config = read_configuration(filepath, True, ignore_option_errors, dist)
2024-03-23T23:26:02,692   listing git files failed - pretending there aren't any
2024-03-23T23:26:02,711   reading manifest file 'cryodrgn.egg-info/SOURCES.txt'
2024-03-23T23:26:02,733   reading manifest template 'MANIFEST.in'
2024-03-23T23:26:02,738   adding license file 'LICENSE.txt'
2024-03-23T23:26:02,770   writing manifest file 'cryodrgn.egg-info/SOURCES.txt'
2024-03-23T23:26:02,975   Getting requirements to build wheel: finished with status 'done'
2024-03-23T23:26:03,013   Installing backend dependencies: started
2024-03-23T23:26:03,016   Running command pip subprocess to install backend dependencies
2024-03-23T23:26:05,870   Using pip 24.0 from /usr/local/lib/python3.7/dist-packages/pip (python 3.7)
2024-03-23T23:26:07,088   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-03-23T23:26:07,492     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/7d/cd/d7460c9a869b16c3dd4e1e403cce337df165368c71d6af229a74699622ce/wheel-0.43.0-py3-none-any.whl (from https://pypi.org/simple/wheel/) (requires-python:>=3.8)
2024-03-23T23:26:07,495     Link requires a different Python (3.7.3 not in: '>=3.8'): https://files.pythonhosted.org/packages/b8/d6/ac9cd92ea2ad502ff7c1ab683806a9deb34711a1e2bd8a59814e8fc27e69/wheel-0.43.0.tar.gz (from https://pypi.org/simple/wheel/) (requires-python:>=3.8)
2024-03-23T23:26:08,609     Link requires a different Python (3.7.3 not in: '>=3.8'): https://www.piwheels.org/simple/wheel/wheel-0.43.0-py3-none-any.whl#sha256=55c570405f142630c6b9f72fe09d9b67cf1477fcf543ae5b8dcb1f5b7377da81 (from https://www.piwheels.org/simple/wheel/) (requires-python:>=3.8)
2024-03-23T23:26:08,813   Collecting wheel
2024-03-23T23:26:08,847     Using cached https://www.piwheels.org/simple/wheel/wheel-0.42.0-py3-none-any.whl (65 kB)
2024-03-23T23:26:12,395   Installing collected packages: wheel
2024-03-23T23:26:12,838     Creating /tmp/pip-build-env-p9zb1nbi/normal/bin
2024-03-23T23:26:12,842     changing mode of /tmp/pip-build-env-p9zb1nbi/normal/bin/wheel to 755
2024-03-23T23:26:12,868   Successfully installed wheel-0.42.0
2024-03-23T23:26:13,698   Installing backend dependencies: finished with status 'done'
2024-03-23T23:26:13,704   Created temporary directory: /tmp/pip-modern-metadata-sil0fecs
2024-03-23T23:26:13,710   Preparing metadata (pyproject.toml): started
2024-03-23T23:26:13,712   Running command Preparing metadata (pyproject.toml)
2024-03-23T23:26:15,878   running dist_info
2024-03-23T23:26:15,895   creating /tmp/pip-modern-metadata-sil0fecs/cryodrgn.egg-info
2024-03-23T23:26:15,909   writing /tmp/pip-modern-metadata-sil0fecs/cryodrgn.egg-info/PKG-INFO
2024-03-23T23:26:15,916   writing dependency_links to /tmp/pip-modern-metadata-sil0fecs/cryodrgn.egg-info/dependency_links.txt
2024-03-23T23:26:15,920   writing entry points to /tmp/pip-modern-metadata-sil0fecs/cryodrgn.egg-info/entry_points.txt
2024-03-23T23:26:15,923   writing requirements to /tmp/pip-modern-metadata-sil0fecs/cryodrgn.egg-info/requires.txt
2024-03-23T23:26:15,925   writing top-level names to /tmp/pip-modern-metadata-sil0fecs/cryodrgn.egg-info/top_level.txt
2024-03-23T23:26:15,928   writing manifest file '/tmp/pip-modern-metadata-sil0fecs/cryodrgn.egg-info/SOURCES.txt'
2024-03-23T23:26:16,067   /tmp/pip-build-env-p9zb1nbi/overlay/lib/python3.7/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*.
2024-03-23T23:26:16,067     config = read_configuration(filepath, True, ignore_option_errors, dist)
2024-03-23T23:26:16,067   listing git files failed - pretending there aren't any
2024-03-23T23:26:16,087   reading manifest file '/tmp/pip-modern-metadata-sil0fecs/cryodrgn.egg-info/SOURCES.txt'
2024-03-23T23:26:16,094   reading manifest template 'MANIFEST.in'
2024-03-23T23:26:16,100   adding license file 'LICENSE.txt'
2024-03-23T23:26:16,114   writing manifest file '/tmp/pip-modern-metadata-sil0fecs/cryodrgn.egg-info/SOURCES.txt'
2024-03-23T23:26:16,116   creating '/tmp/pip-modern-metadata-sil0fecs/cryodrgn-3.2.0a1.dist-info'
2024-03-23T23:26:16,443   Preparing metadata (pyproject.toml): finished with status 'done'
2024-03-23T23:26:16,463   Source in /tmp/pip-wheel-tm4gu6di/cryodrgn_a28593cc17cf488b84bdbcdd8f964ac7 has version 3.2.0a1, which satisfies requirement cryodrgn==3.2.0a1 from https://files.pythonhosted.org/packages/3d/7e/6f69becd5004ad87380939fd7438a730a9a723a76012e918731f58e8355c/cryodrgn-3.2.0a1.tar.gz
2024-03-23T23:26:16,465   Removed cryodrgn==3.2.0a1 from https://files.pythonhosted.org/packages/3d/7e/6f69becd5004ad87380939fd7438a730a9a723a76012e918731f58e8355c/cryodrgn-3.2.0a1.tar.gz from build tracker '/tmp/pip-build-tracker-mjyi3rwg'
2024-03-23T23:26:16,486 Created temporary directory: /tmp/pip-unpack-nsu9vexx
2024-03-23T23:26:16,488 Created temporary directory: /tmp/pip-unpack-y0zimcpw
2024-03-23T23:26:16,599 Building wheels for collected packages: cryodrgn
2024-03-23T23:26:16,608   Created temporary directory: /tmp/pip-wheel-notvco0g
2024-03-23T23:26:16,609   Destination directory: /tmp/pip-wheel-notvco0g
2024-03-23T23:26:16,614   Building wheel for cryodrgn (pyproject.toml): started
2024-03-23T23:26:16,616   Running command Building wheel for cryodrgn (pyproject.toml)
2024-03-23T23:26:18,669   running bdist_wheel
2024-03-23T23:26:18,733   running build
2024-03-23T23:26:18,734   running build_py
2024-03-23T23:26:18,752   creating build
2024-03-23T23:26:18,754   creating build/lib
2024-03-23T23:26:18,756   creating build/lib/cryodrgn
2024-03-23T23:26:18,758   copying cryodrgn/lattice.py -> build/lib/cryodrgn
2024-03-23T23:26:18,763   copying cryodrgn/_version.py -> build/lib/cryodrgn
2024-03-23T23:26:18,767   copying cryodrgn/losses.py -> build/lib/cryodrgn
2024-03-23T23:26:18,771   copying cryodrgn/ctf.py -> build/lib/cryodrgn
2024-03-23T23:26:18,776   copying cryodrgn/fft.py -> build/lib/cryodrgn
2024-03-23T23:26:18,780   copying cryodrgn/__init__.py -> build/lib/cryodrgn
2024-03-23T23:26:18,783   copying cryodrgn/starfile.py -> build/lib/cryodrgn
2024-03-23T23:26:18,787   copying cryodrgn/source.py -> build/lib/cryodrgn
2024-03-23T23:26:18,791   copying cryodrgn/so3_grid.py -> build/lib/cryodrgn
2024-03-23T23:26:18,795   copying cryodrgn/mrc.py -> build/lib/cryodrgn
2024-03-23T23:26:18,799   copying cryodrgn/utils.py -> build/lib/cryodrgn
2024-03-23T23:26:18,803   copying cryodrgn/pose.py -> build/lib/cryodrgn
2024-03-23T23:26:18,807   copying cryodrgn/dataset.py -> build/lib/cryodrgn
2024-03-23T23:26:18,811   copying cryodrgn/beta_schedule.py -> build/lib/cryodrgn
2024-03-23T23:26:18,815   copying cryodrgn/shift_grid3.py -> build/lib/cryodrgn
2024-03-23T23:26:18,818   copying cryodrgn/pose_search.py -> build/lib/cryodrgn
2024-03-23T23:26:18,823   copying cryodrgn/make_healpy.py -> build/lib/cryodrgn
2024-03-23T23:26:18,826   copying cryodrgn/lie_tools.py -> build/lib/cryodrgn
2024-03-23T23:26:18,830   copying cryodrgn/command_line.py -> build/lib/cryodrgn
2024-03-23T23:26:18,833   copying cryodrgn/config.py -> build/lib/cryodrgn
2024-03-23T23:26:18,837   copying cryodrgn/models.py -> build/lib/cryodrgn
2024-03-23T23:26:18,842   copying cryodrgn/shift_grid.py -> build/lib/cryodrgn
2024-03-23T23:26:18,846   copying cryodrgn/analysis.py -> build/lib/cryodrgn
2024-03-23T23:26:18,854   creating build/lib/cryodrgn/commands_utils
2024-03-23T23:26:18,856   copying cryodrgn/commands_utils/concat_pkls.py -> build/lib/cryodrgn/commands_utils
2024-03-23T23:26:18,860   copying cryodrgn/commands_utils/write_star.py -> build/lib/cryodrgn/commands_utils
2024-03-23T23:26:18,863   copying cryodrgn/commands_utils/flip_hand.py -> build/lib/cryodrgn/commands_utils
2024-03-23T23:26:18,867   copying cryodrgn/commands_utils/phase_flip.py -> build/lib/cryodrgn/commands_utils
2024-03-23T23:26:18,870   copying cryodrgn/commands_utils/filter_pkl.py -> build/lib/cryodrgn/commands_utils
2024-03-23T23:26:18,873   copying cryodrgn/commands_utils/add_psize.py -> build/lib/cryodrgn/commands_utils
2024-03-23T23:26:18,877   copying cryodrgn/commands_utils/__init__.py -> build/lib/cryodrgn/commands_utils
2024-03-23T23:26:18,879   copying cryodrgn/commands_utils/select_clusters.py -> build/lib/cryodrgn/commands_utils
2024-03-23T23:26:18,883   copying cryodrgn/commands_utils/translate_mrcs.py -> build/lib/cryodrgn/commands_utils
2024-03-23T23:26:18,886   copying cryodrgn/commands_utils/view_cs_header.py -> build/lib/cryodrgn/commands_utils
2024-03-23T23:26:18,889   copying cryodrgn/commands_utils/select_random.py -> build/lib/cryodrgn/commands_utils
2024-03-23T23:26:18,892   copying cryodrgn/commands_utils/view_header.py -> build/lib/cryodrgn/commands_utils
2024-03-23T23:26:18,895   copying cryodrgn/commands_utils/clean.py -> build/lib/cryodrgn/commands_utils
2024-03-23T23:26:18,899   copying cryodrgn/commands_utils/fsc.py -> build/lib/cryodrgn/commands_utils
2024-03-23T23:26:18,903   copying cryodrgn/commands_utils/write_cs.py -> build/lib/cryodrgn/commands_utils
2024-03-23T23:26:18,906   copying cryodrgn/commands_utils/filter_star.py -> build/lib/cryodrgn/commands_utils
2024-03-23T23:26:18,909   copying cryodrgn/commands_utils/invert_contrast.py -> build/lib/cryodrgn/commands_utils
2024-03-23T23:26:18,912   copying cryodrgn/commands_utils/filter_mrcs.py -> build/lib/cryodrgn/commands_utils
2024-03-23T23:26:18,915   copying cryodrgn/commands_utils/gen_mask.py -> build/lib/cryodrgn/commands_utils
2024-03-23T23:26:18,919   copying cryodrgn/commands_utils/view_mrcs.py -> build/lib/cryodrgn/commands_utils
2024-03-23T23:26:18,926   creating build/lib/cryodrgn/commands
2024-03-23T23:26:18,927   copying cryodrgn/commands/downsample.py -> build/lib/cryodrgn/commands
2024-03-23T23:26:18,931   copying cryodrgn/commands/parse_ctf_csparc.py -> build/lib/cryodrgn/commands
2024-03-23T23:26:18,935   copying cryodrgn/commands/parse_ctf_star.py -> build/lib/cryodrgn/commands
2024-03-23T23:26:18,938   copying cryodrgn/commands/eval_vol.py -> build/lib/cryodrgn/commands
2024-03-23T23:26:18,942   copying cryodrgn/commands/analyze.py -> build/lib/cryodrgn/commands
2024-03-23T23:26:18,947   copying cryodrgn/commands/__init__.py -> build/lib/cryodrgn/commands
2024-03-23T23:26:18,949   copying cryodrgn/commands/abinit_het.py -> build/lib/cryodrgn/commands
2024-03-23T23:26:18,955   copying cryodrgn/commands/eval_images.py -> build/lib/cryodrgn/commands
2024-03-23T23:26:18,959   copying cryodrgn/commands/train_vae.py -> build/lib/cryodrgn/commands
2024-03-23T23:26:18,964   copying cryodrgn/commands/backproject_voxel.py -> build/lib/cryodrgn/commands
2024-03-23T23:26:18,968   copying cryodrgn/commands/preprocess.py -> build/lib/cryodrgn/commands
2024-03-23T23:26:18,972   copying cryodrgn/commands/direct_traversal.py -> build/lib/cryodrgn/commands
2024-03-23T23:26:18,976   copying cryodrgn/commands/pc_traversal.py -> build/lib/cryodrgn/commands
2024-03-23T23:26:18,980   copying cryodrgn/commands/graph_traversal.py -> build/lib/cryodrgn/commands
2024-03-23T23:26:18,983   copying cryodrgn/commands/train_nn.py -> build/lib/cryodrgn/commands
2024-03-23T23:26:18,988   copying cryodrgn/commands/analyze_landscape_full.py -> build/lib/cryodrgn/commands
2024-03-23T23:26:18,992   copying cryodrgn/commands/view_config.py -> build/lib/cryodrgn/commands
2024-03-23T23:26:18,995   copying cryodrgn/commands/filter.py -> build/lib/cryodrgn/commands
2024-03-23T23:26:19,000   copying cryodrgn/commands/parse_pose_star.py -> build/lib/cryodrgn/commands
2024-03-23T23:26:19,003   copying cryodrgn/commands/parse_pose_csparc.py -> build/lib/cryodrgn/commands
2024-03-23T23:26:19,007   copying cryodrgn/commands/analyze_landscape.py -> build/lib/cryodrgn/commands
2024-03-23T23:26:19,012   copying cryodrgn/commands/abinit_homo.py -> build/lib/cryodrgn/commands
2024-03-23T23:26:19,016   running egg_info
2024-03-23T23:26:19,029   writing cryodrgn.egg-info/PKG-INFO
2024-03-23T23:26:19,034   writing dependency_links to cryodrgn.egg-info/dependency_links.txt
2024-03-23T23:26:19,038   writing entry points to cryodrgn.egg-info/entry_points.txt
2024-03-23T23:26:19,041   writing requirements to cryodrgn.egg-info/requires.txt
2024-03-23T23:26:19,043   writing top-level names to cryodrgn.egg-info/top_level.txt
2024-03-23T23:26:19,130   /tmp/pip-build-env-p9zb1nbi/overlay/lib/python3.7/site-packages/setuptools/config/pyprojecttoml.py:66: _BetaConfiguration: Support for `[tool.setuptools]` in `pyproject.toml` is still *beta*.
2024-03-23T23:26:19,130     config = read_configuration(filepath, True, ignore_option_errors, dist)
2024-03-23T23:26:19,131   listing git files failed - pretending there aren't any
2024-03-23T23:26:19,149   reading manifest file 'cryodrgn.egg-info/SOURCES.txt'
2024-03-23T23:26:19,213   reading manifest template 'MANIFEST.in'
2024-03-23T23:26:19,218   adding license file 'LICENSE.txt'
2024-03-23T23:26:19,250   writing manifest file 'cryodrgn.egg-info/SOURCES.txt'
2024-03-23T23:26:19,279   copying cryodrgn/healpy_grid.json -> build/lib/cryodrgn
2024-03-23T23:26:19,696   creating build/lib/cryodrgn/templates
2024-03-23T23:26:19,698   copying cryodrgn/templates/cryoDRGN_ET_viz_template.ipynb -> build/lib/cryodrgn/templates
2024-03-23T23:26:19,703   copying cryodrgn/templates/cryoDRGN_analyze_landscape_template.ipynb -> build/lib/cryodrgn/templates
2024-03-23T23:26:19,709   copying cryodrgn/templates/cryoDRGN_figures_template.ipynb -> build/lib/cryodrgn/templates
2024-03-23T23:26:19,714   copying cryodrgn/templates/cryoDRGN_filtering_template.ipynb -> build/lib/cryodrgn/templates
2024-03-23T23:26:19,720   copying cryodrgn/templates/cryoDRGN_viz_template.ipynb -> build/lib/cryodrgn/templates
2024-03-23T23:26:19,768   installing to build/bdist.linux-armv7l/wheel
2024-03-23T23:26:19,769   running install
2024-03-23T23:26:19,833   running install_lib
2024-03-23T23:26:19,848   creating build/bdist.linux-armv7l
2024-03-23T23:26:19,848   creating build/bdist.linux-armv7l/wheel
2024-03-23T23:26:19,852   creating build/bdist.linux-armv7l/wheel/cryodrgn
2024-03-23T23:26:19,854   copying build/lib/cryodrgn/lattice.py -> build/bdist.linux-armv7l/wheel/cryodrgn
2024-03-23T23:26:19,859   copying build/lib/cryodrgn/_version.py -> build/bdist.linux-armv7l/wheel/cryodrgn
2024-03-23T23:26:19,863   copying build/lib/cryodrgn/losses.py -> build/bdist.linux-armv7l/wheel/cryodrgn
2024-03-23T23:26:19,866   copying build/lib/cryodrgn/ctf.py -> build/bdist.linux-armv7l/wheel/cryodrgn
2024-03-23T23:26:19,871   copying build/lib/cryodrgn/fft.py -> build/bdist.linux-armv7l/wheel/cryodrgn
2024-03-23T23:26:19,874   copying build/lib/cryodrgn/__init__.py -> build/bdist.linux-armv7l/wheel/cryodrgn
2024-03-23T23:26:19,878   copying build/lib/cryodrgn/starfile.py -> build/bdist.linux-armv7l/wheel/cryodrgn
2024-03-23T23:26:19,882   copying build/lib/cryodrgn/source.py -> build/bdist.linux-armv7l/wheel/cryodrgn
2024-03-23T23:26:19,888   copying build/lib/cryodrgn/so3_grid.py -> build/bdist.linux-armv7l/wheel/cryodrgn
2024-03-23T23:26:19,892   copying build/lib/cryodrgn/mrc.py -> build/bdist.linux-armv7l/wheel/cryodrgn
2024-03-23T23:26:19,896   copying build/lib/cryodrgn/utils.py -> build/bdist.linux-armv7l/wheel/cryodrgn
2024-03-23T23:26:19,901   copying build/lib/cryodrgn/pose.py -> build/bdist.linux-armv7l/wheel/cryodrgn
2024-03-23T23:26:19,906   creating build/bdist.linux-armv7l/wheel/cryodrgn/templates
2024-03-23T23:26:19,908   copying build/lib/cryodrgn/templates/cryoDRGN_ET_viz_template.ipynb -> build/bdist.linux-armv7l/wheel/cryodrgn/templates
2024-03-23T23:26:19,913   copying build/lib/cryodrgn/templates/cryoDRGN_viz_template.ipynb -> build/bdist.linux-armv7l/wheel/cryodrgn/templates
2024-03-23T23:26:19,919   copying build/lib/cryodrgn/templates/cryoDRGN_filtering_template.ipynb -> build/bdist.linux-armv7l/wheel/cryodrgn/templates
2024-03-23T23:26:19,925   copying build/lib/cryodrgn/templates/cryoDRGN_analyze_landscape_template.ipynb -> build/bdist.linux-armv7l/wheel/cryodrgn/templates
2024-03-23T23:26:19,930   copying build/lib/cryodrgn/templates/cryoDRGN_figures_template.ipynb -> build/bdist.linux-armv7l/wheel/cryodrgn/templates
2024-03-23T23:26:19,935   copying build/lib/cryodrgn/dataset.py -> build/bdist.linux-armv7l/wheel/cryodrgn
2024-03-23T23:26:19,940   copying build/lib/cryodrgn/beta_schedule.py -> build/bdist.linux-armv7l/wheel/cryodrgn
2024-03-23T23:26:19,943   copying build/lib/cryodrgn/shift_grid3.py -> build/bdist.linux-armv7l/wheel/cryodrgn
2024-03-23T23:26:19,946   copying build/lib/cryodrgn/healpy_grid.json -> build/bdist.linux-armv7l/wheel/cryodrgn
2024-03-23T23:26:20,322   copying build/lib/cryodrgn/pose_search.py -> build/bdist.linux-armv7l/wheel/cryodrgn
2024-03-23T23:26:20,328   creating build/bdist.linux-armv7l/wheel/cryodrgn/commands_utils
2024-03-23T23:26:20,330   copying build/lib/cryodrgn/commands_utils/concat_pkls.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands_utils
2024-03-23T23:26:20,334   copying build/lib/cryodrgn/commands_utils/write_star.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands_utils
2024-03-23T23:26:20,338   copying build/lib/cryodrgn/commands_utils/flip_hand.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands_utils
2024-03-23T23:26:20,342   copying build/lib/cryodrgn/commands_utils/phase_flip.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands_utils
2024-03-23T23:26:20,346   copying build/lib/cryodrgn/commands_utils/filter_pkl.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands_utils
2024-03-23T23:26:20,349   copying build/lib/cryodrgn/commands_utils/add_psize.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands_utils
2024-03-23T23:26:20,353   copying build/lib/cryodrgn/commands_utils/__init__.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands_utils
2024-03-23T23:26:20,356   copying build/lib/cryodrgn/commands_utils/select_clusters.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands_utils
2024-03-23T23:26:20,359   copying build/lib/cryodrgn/commands_utils/translate_mrcs.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands_utils
2024-03-23T23:26:20,362   copying build/lib/cryodrgn/commands_utils/view_cs_header.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands_utils
2024-03-23T23:26:20,366   copying build/lib/cryodrgn/commands_utils/select_random.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands_utils
2024-03-23T23:26:20,369   copying build/lib/cryodrgn/commands_utils/view_header.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands_utils
2024-03-23T23:26:20,373   copying build/lib/cryodrgn/commands_utils/clean.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands_utils
2024-03-23T23:26:20,377   copying build/lib/cryodrgn/commands_utils/fsc.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands_utils
2024-03-23T23:26:20,380   copying build/lib/cryodrgn/commands_utils/write_cs.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands_utils
2024-03-23T23:26:20,384   copying build/lib/cryodrgn/commands_utils/filter_star.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands_utils
2024-03-23T23:26:20,387   copying build/lib/cryodrgn/commands_utils/invert_contrast.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands_utils
2024-03-23T23:26:20,391   copying build/lib/cryodrgn/commands_utils/filter_mrcs.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands_utils
2024-03-23T23:26:20,394   copying build/lib/cryodrgn/commands_utils/gen_mask.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands_utils
2024-03-23T23:26:20,398   copying build/lib/cryodrgn/commands_utils/view_mrcs.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands_utils
2024-03-23T23:26:20,401   copying build/lib/cryodrgn/make_healpy.py -> build/bdist.linux-armv7l/wheel/cryodrgn
2024-03-23T23:26:20,406   creating build/bdist.linux-armv7l/wheel/cryodrgn/commands
2024-03-23T23:26:20,408   copying build/lib/cryodrgn/commands/downsample.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands
2024-03-23T23:26:20,412   copying build/lib/cryodrgn/commands/parse_ctf_csparc.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands
2024-03-23T23:26:20,416   copying build/lib/cryodrgn/commands/parse_ctf_star.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands
2024-03-23T23:26:20,419   copying build/lib/cryodrgn/commands/eval_vol.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands
2024-03-23T23:26:20,423   copying build/lib/cryodrgn/commands/analyze.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands
2024-03-23T23:26:20,428   copying build/lib/cryodrgn/commands/__init__.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands
2024-03-23T23:26:20,431   copying build/lib/cryodrgn/commands/abinit_het.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands
2024-03-23T23:26:20,437   copying build/lib/cryodrgn/commands/eval_images.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands
2024-03-23T23:26:20,441   copying build/lib/cryodrgn/commands/train_vae.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands
2024-03-23T23:26:20,446   copying build/lib/cryodrgn/commands/backproject_voxel.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands
2024-03-23T23:26:20,451   copying build/lib/cryodrgn/commands/preprocess.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands
2024-03-23T23:26:20,455   copying build/lib/cryodrgn/commands/direct_traversal.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands
2024-03-23T23:26:20,459   copying build/lib/cryodrgn/commands/pc_traversal.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands
2024-03-23T23:26:20,463   copying build/lib/cryodrgn/commands/graph_traversal.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands
2024-03-23T23:26:20,467   copying build/lib/cryodrgn/commands/train_nn.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands
2024-03-23T23:26:20,473   copying build/lib/cryodrgn/commands/analyze_landscape_full.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands
2024-03-23T23:26:20,478   copying build/lib/cryodrgn/commands/view_config.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands
2024-03-23T23:26:20,482   copying build/lib/cryodrgn/commands/filter.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands
2024-03-23T23:26:20,487   copying build/lib/cryodrgn/commands/parse_pose_star.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands
2024-03-23T23:26:20,492   copying build/lib/cryodrgn/commands/parse_pose_csparc.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands
2024-03-23T23:26:20,496   copying build/lib/cryodrgn/commands/analyze_landscape.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands
2024-03-23T23:26:20,501   copying build/lib/cryodrgn/commands/abinit_homo.py -> build/bdist.linux-armv7l/wheel/cryodrgn/commands
2024-03-23T23:26:20,506   copying build/lib/cryodrgn/lie_tools.py -> build/bdist.linux-armv7l/wheel/cryodrgn
2024-03-23T23:26:20,511   copying build/lib/cryodrgn/command_line.py -> build/bdist.linux-armv7l/wheel/cryodrgn
2024-03-23T23:26:20,514   copying build/lib/cryodrgn/config.py -> build/bdist.linux-armv7l/wheel/cryodrgn
2024-03-23T23:26:20,518   copying build/lib/cryodrgn/models.py -> build/bdist.linux-armv7l/wheel/cryodrgn
2024-03-23T23:26:20,524   copying build/lib/cryodrgn/shift_grid.py -> build/bdist.linux-armv7l/wheel/cryodrgn
2024-03-23T23:26:20,528   copying build/lib/cryodrgn/analysis.py -> build/bdist.linux-armv7l/wheel/cryodrgn
2024-03-23T23:26:20,533   running install_egg_info
2024-03-23T23:26:20,547   Copying cryodrgn.egg-info to build/bdist.linux-armv7l/wheel/cryodrgn-3.2.0a1-py3.7.egg-info
2024-03-23T23:26:20,576   running install_scripts
2024-03-23T23:26:20,642   creating build/bdist.linux-armv7l/wheel/cryodrgn-3.2.0a1.dist-info/WHEEL
2024-03-23T23:26:20,647   creating '/tmp/pip-wheel-notvco0g/.tmp-b7khe1g2/cryodrgn-3.2.0a1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-03-23T23:26:20,653   adding 'cryodrgn/__init__.py'
2024-03-23T23:26:20,656   adding 'cryodrgn/_version.py'
2024-03-23T23:26:20,662   adding 'cryodrgn/analysis.py'
2024-03-23T23:26:20,665   adding 'cryodrgn/beta_schedule.py'
2024-03-23T23:26:20,668   adding 'cryodrgn/command_line.py'
2024-03-23T23:26:20,671   adding 'cryodrgn/config.py'
2024-03-23T23:26:20,674   adding 'cryodrgn/ctf.py'
2024-03-23T23:26:20,680   adding 'cryodrgn/dataset.py'
2024-03-23T23:26:20,682   adding 'cryodrgn/fft.py'
2024-03-23T23:26:22,626   adding 'cryodrgn/healpy_grid.json'
2024-03-23T23:26:22,836   adding 'cryodrgn/lattice.py'
2024-03-23T23:26:22,840   adding 'cryodrgn/lie_tools.py'
2024-03-23T23:26:22,842   adding 'cryodrgn/losses.py'
2024-03-23T23:26:22,845   adding 'cryodrgn/make_healpy.py'
2024-03-23T23:26:22,854   adding 'cryodrgn/models.py'
2024-03-23T23:26:22,859   adding 'cryodrgn/mrc.py'
2024-03-23T23:26:22,863   adding 'cryodrgn/pose.py'
2024-03-23T23:26:22,868   adding 'cryodrgn/pose_search.py'
2024-03-23T23:26:22,871   adding 'cryodrgn/shift_grid.py'
2024-03-23T23:26:22,874   adding 'cryodrgn/shift_grid3.py'
2024-03-23T23:26:22,877   adding 'cryodrgn/so3_grid.py'
2024-03-23T23:26:22,882   adding 'cryodrgn/source.py'
2024-03-23T23:26:22,886   adding 'cryodrgn/starfile.py'
2024-03-23T23:26:22,890   adding 'cryodrgn/utils.py'
2024-03-23T23:26:22,894   adding 'cryodrgn/commands/__init__.py'
2024-03-23T23:26:22,903   adding 'cryodrgn/commands/abinit_het.py'
2024-03-23T23:26:22,911   adding 'cryodrgn/commands/abinit_homo.py'
2024-03-23T23:26:22,916   adding 'cryodrgn/commands/analyze.py'
2024-03-23T23:26:22,922   adding 'cryodrgn/commands/analyze_landscape.py'
2024-03-23T23:26:22,927   adding 'cryodrgn/commands/analyze_landscape_full.py'
2024-03-23T23:26:22,931   adding 'cryodrgn/commands/backproject_voxel.py'
2024-03-23T23:26:22,934   adding 'cryodrgn/commands/direct_traversal.py'
2024-03-23T23:26:22,938   adding 'cryodrgn/commands/downsample.py'
2024-03-23T23:26:22,942   adding 'cryodrgn/commands/eval_images.py'
2024-03-23T23:26:22,946   adding 'cryodrgn/commands/eval_vol.py'
2024-03-23T23:26:22,951   adding 'cryodrgn/commands/filter.py'
2024-03-23T23:26:22,955   adding 'cryodrgn/commands/graph_traversal.py'
2024-03-23T23:26:22,958   adding 'cryodrgn/commands/parse_ctf_csparc.py'
2024-03-23T23:26:22,961   adding 'cryodrgn/commands/parse_ctf_star.py'
2024-03-23T23:26:22,964   adding 'cryodrgn/commands/parse_pose_csparc.py'
2024-03-23T23:26:22,967   adding 'cryodrgn/commands/parse_pose_star.py'
2024-03-23T23:26:22,970   adding 'cryodrgn/commands/pc_traversal.py'
2024-03-23T23:26:22,973   adding 'cryodrgn/commands/preprocess.py'
2024-03-23T23:26:22,979   adding 'cryodrgn/commands/train_nn.py'
2024-03-23T23:26:22,989   adding 'cryodrgn/commands/train_vae.py'
2024-03-23T23:26:22,992   adding 'cryodrgn/commands/view_config.py'
2024-03-23T23:26:22,996   adding 'cryodrgn/commands_utils/__init__.py'
2024-03-23T23:26:22,999   adding 'cryodrgn/commands_utils/add_psize.py'
2024-03-23T23:26:23,003   adding 'cryodrgn/commands_utils/clean.py'
2024-03-23T23:26:23,005   adding 'cryodrgn/commands_utils/concat_pkls.py'
2024-03-23T23:26:23,008   adding 'cryodrgn/commands_utils/filter_mrcs.py'
2024-03-23T23:26:23,011   adding 'cryodrgn/commands_utils/filter_pkl.py'
2024-03-23T23:26:23,013   adding 'cryodrgn/commands_utils/filter_star.py'
2024-03-23T23:26:23,016   adding 'cryodrgn/commands_utils/flip_hand.py'
2024-03-23T23:26:23,019   adding 'cryodrgn/commands_utils/fsc.py'
2024-03-23T23:26:23,022   adding 'cryodrgn/commands_utils/gen_mask.py'
2024-03-23T23:26:23,024   adding 'cryodrgn/commands_utils/invert_contrast.py'
2024-03-23T23:26:23,027   adding 'cryodrgn/commands_utils/phase_flip.py'
2024-03-23T23:26:23,030   adding 'cryodrgn/commands_utils/select_clusters.py'
2024-03-23T23:26:23,033   adding 'cryodrgn/commands_utils/select_random.py'
2024-03-23T23:26:23,035   adding 'cryodrgn/commands_utils/translate_mrcs.py'
2024-03-23T23:26:23,038   adding 'cryodrgn/commands_utils/view_cs_header.py'
2024-03-23T23:26:23,041   adding 'cryodrgn/commands_utils/view_header.py'
2024-03-23T23:26:23,043   adding 'cryodrgn/commands_utils/view_mrcs.py'
2024-03-23T23:26:23,047   adding 'cryodrgn/commands_utils/write_cs.py'
2024-03-23T23:26:23,050   adding 'cryodrgn/commands_utils/write_star.py'
2024-03-23T23:26:23,057   adding 'cryodrgn/templates/cryoDRGN_ET_viz_template.ipynb'
2024-03-23T23:26:23,061   adding 'cryodrgn/templates/cryoDRGN_analyze_landscape_template.ipynb'
2024-03-23T23:26:23,065   adding 'cryodrgn/templates/cryoDRGN_figures_template.ipynb'
2024-03-23T23:26:23,072   adding 'cryodrgn/templates/cryoDRGN_filtering_template.ipynb'
2024-03-23T23:26:23,078   adding 'cryodrgn/templates/cryoDRGN_viz_template.ipynb'
2024-03-23T23:26:23,095   adding 'cryodrgn-3.2.0a1.dist-info/LICENSE.txt'
2024-03-23T23:26:23,106   adding 'cryodrgn-3.2.0a1.dist-info/METADATA'
2024-03-23T23:26:23,108   adding 'cryodrgn-3.2.0a1.dist-info/WHEEL'
2024-03-23T23:26:23,110   adding 'cryodrgn-3.2.0a1.dist-info/entry_points.txt'
2024-03-23T23:26:23,112   adding 'cryodrgn-3.2.0a1.dist-info/top_level.txt'
2024-03-23T23:26:23,116   adding 'cryodrgn-3.2.0a1.dist-info/RECORD'
2024-03-23T23:26:23,163   removing build/bdist.linux-armv7l/wheel
2024-03-23T23:26:23,422   Building wheel for cryodrgn (pyproject.toml): finished with status 'done'
2024-03-23T23:26:23,501   Created wheel for cryodrgn: filename=cryodrgn-3.2.0a1-py3-none-any.whl size=1155327 sha256=a23e8245ce860c4122cef6f81db6fe3918ab253dab52b10afd0e4f65d9428b3e
2024-03-23T23:26:23,503   Stored in directory: /tmp/pip-ephem-wheel-cache-vqa0lc2_/wheels/46/8e/38/36d8cafbcbdcbb71f1da89149dd10287f3920d45455b312ed9
2024-03-23T23:26:23,546 Successfully built cryodrgn
2024-03-23T23:26:23,641 Removed build tracker: '/tmp/pip-build-tracker-mjyi3rwg'