2024-03-27T10:32:26,302 Created temporary directory: /tmp/pip-build-tracker-69q2maln
2024-03-27T10:32:26,303 Initialized build tracking at /tmp/pip-build-tracker-69q2maln
2024-03-27T10:32:26,303 Created build tracker: /tmp/pip-build-tracker-69q2maln
2024-03-27T10:32:26,303 Entered build tracker: /tmp/pip-build-tracker-69q2maln
2024-03-27T10:32:26,304 Created temporary directory: /tmp/pip-wheel-v_g34oqg
2024-03-27T10:32:26,308 Created temporary directory: /tmp/pip-ephem-wheel-cache-tmrdawpw
2024-03-27T10:32:26,334 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-03-27T10:32:26,337 2 location(s) to search for versions of moleculekit:
2024-03-27T10:32:26,337 * https://pypi.org/simple/moleculekit/
2024-03-27T10:32:26,337 * https://www.piwheels.org/simple/moleculekit/
2024-03-27T10:32:26,338 Fetching project page and analyzing links: https://pypi.org/simple/moleculekit/
2024-03-27T10:32:26,339 Getting page https://pypi.org/simple/moleculekit/
2024-03-27T10:32:26,340 Found index url https://pypi.org/simple/
2024-03-27T10:32:26,479 Fetched page https://pypi.org/simple/moleculekit/ as application/vnd.pypi.simple.v1+json
2024-03-27T10:32:26,522   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/91/e6/25b6853357dfef8a4026325e420d8213d34c17c078a2f13b60cbb6213ea3/moleculekit-0.1.4-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,523   Found link https://files.pythonhosted.org/packages/13/0f/a200e8e7632d3a521cfc7c15fa4d0270802efce40f98ac5a5cae58385b7e/moleculekit-0.1.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.4
2024-03-27T10:32:26,523   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/9f/a5/eac32fcb2e9ff0d30298aa4cec8e152c95d675c4dd1a1a5d7676986d4d75/moleculekit-0.1.5-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,523   Found link https://files.pythonhosted.org/packages/c5/6f/ae7d1b8513eb23ec0fa8e153c42fda0ee96f9e29c6e4808c5ff78c115e89/moleculekit-0.1.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.5
2024-03-27T10:32:26,523   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/e2/51/0f4e4b95d0d5c16664ede7f2cd31e6d6003e9c940a8fbe28c74de91de627/moleculekit-0.1.6-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,524   Found link https://files.pythonhosted.org/packages/08/fa/bc1b5918a1715901fd0ea1e796de9e6647276943983962616f2ddceb1c3b/moleculekit-0.1.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.6
2024-03-27T10:32:26,524   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/49/59/ddf780e7a574dde727d5db8b93c41bcc3d19436a8ae9f468bad5ea48529e/moleculekit-0.1.7-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,524   Found link https://files.pythonhosted.org/packages/c7/cb/d1b609de2d59d10a60ca74c9d1a044534f608e323dc16a87e5bd77ee0eb0/moleculekit-0.1.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.7
2024-03-27T10:32:26,524   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/5b/a4/59e6017c4e5b99be72d8e0eb6b6442061f338e309d91c25d607162298d11/moleculekit-0.1.8-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,525   Found link https://files.pythonhosted.org/packages/c0/1d/753c7461942457e39fb069504cdc381518a4ef18f486de0a42572236095e/moleculekit-0.1.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.8
2024-03-27T10:32:26,525   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/28/39/e4219020234475a17077f38ebcbdff236872d8e3a0455b376edb847f4141/moleculekit-0.1.9-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,525   Found link https://files.pythonhosted.org/packages/e0/c6/5d47b6257a3d1aca76d635d1dc8fffd6ed712fbe324bfeb2f2da47edda09/moleculekit-0.1.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.9
2024-03-27T10:32:26,525   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/3c/12/42a0a156c8a51b2ef9de7c720cbcd226c1b0a7d13dce7dcdd4c34480e05f/moleculekit-0.1.12-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,526   Found link https://files.pythonhosted.org/packages/12/9d/ef12aeb7165210a6d06f5a735640db6c49cda2597bebb3584e72f7a2aee5/moleculekit-0.1.12.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.12
2024-03-27T10:32:26,526   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/e0/de/ddea29e806547e8743801bd5b44f5f4b62e96a3b6aa1b59e7ae3c183e65d/moleculekit-0.1.14-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,526   Found link https://files.pythonhosted.org/packages/0f/b8/5dce8ade2a03ba18558275d58f1f586fc78b76442ca923e02e05b7aa4638/moleculekit-0.1.14.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.14
2024-03-27T10:32:26,526   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/98/67/c911fd0aab052ed8866739c282be96070bcafee75cad331165f356d0bf11/moleculekit-0.1.15-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,527   Found link https://files.pythonhosted.org/packages/be/5c/b803aa60ac93136e6fce9ab52ec50aec246481c5db76892780152f769d75/moleculekit-0.1.15.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.15
2024-03-27T10:32:26,527   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/4f/30/78d34f8541a5e0e7488b6d59c43b29cf4d9f42467553fb0cee41312409c7/moleculekit-0.1.16-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,527   Found link https://files.pythonhosted.org/packages/d3/39/0774efc740b7e6a6969e084e0eb126483049a60229de80cc09a1a4b78011/moleculekit-0.1.16.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.16
2024-03-27T10:32:26,527   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/ca/d8/f9dd491ee5984f59dbd1206bb41062543e1a1664bb002d4b2675ec3f882c/moleculekit-0.1.17-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,528   Found link https://files.pythonhosted.org/packages/f6/27/b820e1158e448f35830265eeb023ec7d7cc72272136a31ec5365a893174f/moleculekit-0.1.17.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.17
2024-03-27T10:32:26,528   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/0d/df/1d0dfd734e1d67c6ba1a1291b6f530c60eb3a65c25e2990d0fb62c73dbea/moleculekit-0.1.19-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,528   Found link https://files.pythonhosted.org/packages/6e/55/28d041ad7324e063e00ed2e0a5cd91d4c67e6cda3e62c24ab9c3ea2ad5dc/moleculekit-0.1.19.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.19
2024-03-27T10:32:26,528   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/f0/f3/18f3b015e5fdf04c0243d63132d4d29ab807b608bda9cab6de505c060196/moleculekit-0.1.21-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,528   Found link https://files.pythonhosted.org/packages/d7/2f/510d466d4e507523c6f8bb5323a03351e0a9e6422b29ab7a9d7b34101484/moleculekit-0.1.21.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.21
2024-03-27T10:32:26,529   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/2c/83/5bdc26bbc9c0dc6b7fa54260134f5545c6f8c01e50b4cc94de02d0a2f295/moleculekit-0.1.22-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,529   Found link https://files.pythonhosted.org/packages/28/80/3c053d293b0aad5df512b8c7bf1ef111c621ee80bbe08ea83763ca004a85/moleculekit-0.1.22.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.22
2024-03-27T10:32:26,529   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/5d/ec/9e6438a424607cba93fe71b89ef89dbff35369f133ed76ded895861ab290/moleculekit-0.1.23-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,529   Found link https://files.pythonhosted.org/packages/6d/c3/680633af7541d2c7ecf2fde4dc9661f107efaf55688d3f41d15407cb2248/moleculekit-0.1.23.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.23
2024-03-27T10:32:26,530   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/0b/02/f2bbd133b7e76a60bdc1d92d10621ce9f60f8eeaf97ed7dacae2e216cb2b/moleculekit-0.1.24-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,530   Found link https://files.pythonhosted.org/packages/7f/f7/48b8b09fbf6e368925a186ef4cb874ae0abfae6d5b81bd2656502290add5/moleculekit-0.1.24.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.24
2024-03-27T10:32:26,530   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/1e/bd/24146e575547d1fc8bd24b4b7d9a57cbe14c357ebf85d638df6421412465/moleculekit-0.1.26-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,530   Found link https://files.pythonhosted.org/packages/f5/6e/a9dafd4b3b109011d156a6f7c726925669e42435b6049859f3a0a050a87f/moleculekit-0.1.26.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.26
2024-03-27T10:32:26,531   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/fe/63/a0e65b18866805186e3a4ba2b8ece20b73b85ec1ce6b3f8597e0c2508178/moleculekit-0.1.27-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,531   Found link https://files.pythonhosted.org/packages/70/7e/a01a54d9e88eaf00ec47989f360fb98d58e871d500aa28c44b9c7b8bd7ff/moleculekit-0.1.27.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.27
2024-03-27T10:32:26,531   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/f1/db/8f0879b07acae5356393297640e1116c459d28b59d19e1bd328da94e4b7a/moleculekit-0.1.29-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,531   Found link https://files.pythonhosted.org/packages/dc/10/67c6720423554f257425330caf21342c13c59bc86aee634f369b481dad7b/moleculekit-0.1.29.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.29
2024-03-27T10:32:26,532   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/83/f1/2cb963c0a74d919761e8516fe969330c122c9874426ff8eef7834b9b0c62/moleculekit-0.1.30-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,532   Found link https://files.pythonhosted.org/packages/a9/87/cd070158b979d89c02edf2a1deb98ced11e6a442952ed67ebb4f281d6700/moleculekit-0.1.30.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.30
2024-03-27T10:32:26,532   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/cf/c4/f211cc80e281f1ee01040cfa490a65e874a54b5bedf2dfd73e3be6e72d93/moleculekit-0.1.31-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,532   Found link https://files.pythonhosted.org/packages/d7/8b/2b012f3371e5fceb875601e16c83a0ddfd5602d1cdceb953a4b36fc12200/moleculekit-0.1.31.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.31
2024-03-27T10:32:26,532   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/bf/2e/56178883cad4d2429d5cb5fb23d17be42663dea6da428df98f2b70be67a3/moleculekit-0.1.32-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,533   Found link https://files.pythonhosted.org/packages/97/34/992324fd9f1bb4d151b3383f601e3b69810e62c9d3530580ae8b43c4dcca/moleculekit-0.1.32.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.32
2024-03-27T10:32:26,533   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/7e/84/8e678afbcbd29c9b462973571bf3a043a7b5dbf7a98f1ac3dc82c3f5fc91/moleculekit-0.2.0-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,533   Found link https://files.pythonhosted.org/packages/10/f8/dfc9b84d16081239c0b6e3a2896e59db9f8b8617a67b7585e98789942324/moleculekit-0.2.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.0
2024-03-27T10:32:26,533   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/cb/a7/e706e1daa9d60d9ca9a96436564ec0612fe5fc850fdabad6e0c5174d52c5/moleculekit-0.2.1-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,534   Found link https://files.pythonhosted.org/packages/a8/ad/3c01c094324fcaf3a516aa3ab376ae4bec251dc2005f172217368e97b1db/moleculekit-0.2.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.1
2024-03-27T10:32:26,534   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/30/c3/e618404cdeb463f4f5f8fbfa1d5d45a81ea3c31cef86e9c6ca14a3d64589/moleculekit-0.2.2-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,534   Found link https://files.pythonhosted.org/packages/ce/2a/e4f0ea22c4e3be055409fbe8cda7802bd2cd1095926f62f2c78b7f447b46/moleculekit-0.2.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.2
2024-03-27T10:32:26,534   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/3c/c6/baf4c6dafa42a7f055cd29cad8a79b2e99baaf474e8ddcff833e02a8c9a2/moleculekit-0.2.3-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,534   Found link https://files.pythonhosted.org/packages/92/3b/d42fa900fbc359ad0b7806344c2eb303f06336fc6bad439db5550483ce5c/moleculekit-0.2.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.3
2024-03-27T10:32:26,535   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/d7/72/5674ef2a697583774eb66559f23b37026098badcc7e14bb09247c112baec/moleculekit-0.2.4-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,535   Found link https://files.pythonhosted.org/packages/7c/f3/5372063ddc10f57f1ea1aa29ab3f06d98d3d29c22d2a3d0c7c318ff7dc4a/moleculekit-0.2.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.4
2024-03-27T10:32:26,535   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/35/99/9bc21e28d9d4007623055b30fc43d18464649dfa39703ea80e9c32ba4607/moleculekit-0.2.5-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,535   Found link https://files.pythonhosted.org/packages/dd/7a/f6d8ac771d9e4c9117ab098a281231e6c4c3fadbbeafce69ac5b8370f2bd/moleculekit-0.2.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.5
2024-03-27T10:32:26,536   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/97/2d/1b5aeecf49f225f13c39534c7a93181f14bbb295f4b0bb50019d7efda717/moleculekit-0.2.6-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,536   Found link https://files.pythonhosted.org/packages/8a/04/f032c25621eac9ccab21dd25c0cb5d7150a21a5b0cde5ae21adb3e2be933/moleculekit-0.2.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.6
2024-03-27T10:32:26,536   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/7b/c3/6023b75cb8d60607d1932a6f3fa1fee5c99e88b692f25e3ed0072a4812a5/moleculekit-0.2.7-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,536   Found link https://files.pythonhosted.org/packages/a6/68/1eb4fb904763839ec4df4eab490702bd7245a6848ebfb693b165d5fbb153/moleculekit-0.2.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.7
2024-03-27T10:32:26,537   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/a3/85/452591c89b66659eaf24e216aef7818e3061a78bb1fc832f8616808949d4/moleculekit-0.2.8-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,537   Found link https://files.pythonhosted.org/packages/68/e0/0fe1302790061ea9e59370a988d67b877642c45a9e6d725819118cc3aae1/moleculekit-0.2.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.8
2024-03-27T10:32:26,537   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/90/90/238209bf8023d0779c0d4a9592786cc94e69d3dde60b5b17473d57c97b60/moleculekit-0.2.9-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,537   Found link https://files.pythonhosted.org/packages/bd/ad/aa7f2c7343506e17f61f2c4223dc912d4f099fdcc3e1736f393c9c31e118/moleculekit-0.2.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.9
2024-03-27T10:32:26,537   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/40/39/e7c3ea68289cf49ac58a53a55de11c71471a26c55268ce2a11dd3d0f4b1d/moleculekit-0.3.0-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,538   Found link https://files.pythonhosted.org/packages/9d/1e/99ffa0d73766a735c3e91d591c92537e37b0024cd9b1d745c4e5933563c1/moleculekit-0.3.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.3.0
2024-03-27T10:32:26,538   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/0e/6f/a11697b46e26552b60513aad11c1862ea314d1628ed83b3d1ea7cb552d51/moleculekit-0.3.1-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,538   Found link https://files.pythonhosted.org/packages/13/f9/af3d7677c2eb61bb310ddad301ab47b9c1db2f923b0efad9ce605112aafb/moleculekit-0.3.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.3.1
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2024-03-27T10:32:26,539   Found link https://files.pythonhosted.org/packages/0d/3f/7743a3ec8c6ed58c5f0c12bf19654ba6275d473044861d9479ff346f8859/moleculekit-0.3.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.3.2
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2024-03-27T10:32:26,539   Found link https://files.pythonhosted.org/packages/a1/bf/2b3762bf7738dd1850a06eb6330cd8d17c49acaa272d43fc80c7c9c44a04/moleculekit-0.3.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.3.3
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2024-03-27T10:32:26,540   Found link https://files.pythonhosted.org/packages/7e/e0/d4abeaf42102abf8d132168518d29b8fec430608a3bb484a3254b63e9d37/moleculekit-0.3.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.3.4
2024-03-27T10:32:26,540   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/94/5a/b800d3737fc73a0197bf983ce179f8bedaa71a331029a733aefedc2a8a0c/moleculekit-0.3.5-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,540   Found link https://files.pythonhosted.org/packages/18/8a/a376ec94bd0c414528774a510846e3a34afec6356cda3d31d3a044a74a15/moleculekit-0.3.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.3.5
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2024-03-27T10:32:26,540   Found link https://files.pythonhosted.org/packages/29/c4/2af9ce826d6a8d2327401dd1a05b3beff8e1f96911d0e334db20410975ee/moleculekit-0.3.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.3.7
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2024-03-27T10:32:26,541   Found link https://files.pythonhosted.org/packages/b0/8f/652d19d5bd69898632ed95d0a37095d2a1ed754d4147d20e1076d0b88e87/moleculekit-0.3.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.3.8
2024-03-27T10:32:26,541   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/1f/d2/4da1254f5b07bedf974fdb9f19ab694a6cf553dc50ab700e3b09ec000031/moleculekit-0.3.9-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,541   Found link https://files.pythonhosted.org/packages/ac/14/2cef434c3bdc911ca4e7aabce48b50f869cf8f829f24958037f9dbb6521e/moleculekit-0.3.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.3.9
2024-03-27T10:32:26,542   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/18/d2/3565f29e52927e9cc0e9a6e77908f7bcd39bb25cc6a953ef326ebb0b920f/moleculekit-0.4.0-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,542   Found link https://files.pythonhosted.org/packages/67/47/5f9440683e69c1612d117c957044f665b4e025bffab93251e31444529fa6/moleculekit-0.4.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.4.0
2024-03-27T10:32:26,542   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/45/48/d6f7e3ff07d4e04aced25dc1e28790e8d1d2aa95ccd0db0f0043e354f0de/moleculekit-0.4.2-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,542   Found link https://files.pythonhosted.org/packages/5c/8c/e37b37f907a6d009fbc458764ab561b9fe758cf0e0d349b7d19908820ab1/moleculekit-0.4.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.4.2
2024-03-27T10:32:26,543   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/ed/8c/cf4a2f026f7b867bcc33cfac6c1fede5ee244c962112f0dc245fcac0939b/moleculekit-0.4.3-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,543   Found link https://files.pythonhosted.org/packages/40/e2/a9ce14fedc2bf7c9b1678a21e860878b5ea4f37b9820ef299ccc70634094/moleculekit-0.4.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.4.3
2024-03-27T10:32:26,543   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/4b/f0/8b8df48948c27171f2db632801a49bd08f3f222d1c6e69abc9281962eb29/moleculekit-0.4.4-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,543   Found link https://files.pythonhosted.org/packages/a4/6d/cdf319e5cf1cbe68e02ce15c36001cf739b9ca932fcafa2bff354c581560/moleculekit-0.4.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.4.4
2024-03-27T10:32:26,544   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/26/45/55b970222953abfaff88d3ee5bbe64b544af8e686254b80f9dbcdc027754/moleculekit-0.4.6-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,544   Found link https://files.pythonhosted.org/packages/8f/22/90193aaf5014419463425cf48b2857ffb08d1a85df3af6407f370ea39358/moleculekit-0.4.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.4.6
2024-03-27T10:32:26,544   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/24/38/72e6ecc3ee5ad4463161bfbba8c4ee06716a2d393eee3dfcbecfc6566ad4/moleculekit-0.4.7-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,544   Found link https://files.pythonhosted.org/packages/eb/7f/e4e084eaf2a6e4af0d1ce91c0b210836fc244592155000f92383528d20e4/moleculekit-0.4.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.4.7
2024-03-27T10:32:26,544   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/3f/a5/68b5af554f766d3dceef94275a75af28358200e0f741a86d38db878c60e1/moleculekit-0.4.8-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,545   Found link https://files.pythonhosted.org/packages/e1/2c/f4b752620b3f00be07e0f661bb3364e220e8b26bb0ce59e95aab7809b0a8/moleculekit-0.4.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.4.8
2024-03-27T10:32:26,545   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/5c/75/2a9151eb7a9fbbd8b36c5283452449e596f081188d25c07f33a176783e8e/moleculekit-0.5.2-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,545   Found link https://files.pythonhosted.org/packages/31/e6/a052ad91265d7e72fcf32d9335d746bba3c06b23fc5a163960bd36e6dde6/moleculekit-0.5.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.5.2
2024-03-27T10:32:26,545   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/b0/15/bc106c1d99e2b235c80427b4d70f6392bf76a9fe17d2c8df562a03a79aaf/moleculekit-0.5.3-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,546   Found link https://files.pythonhosted.org/packages/16/e8/a60ecf23c91f1248aaeca4c5a3aacb14887fa3785e061ab5e225e06d7de3/moleculekit-0.5.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.5.3
2024-03-27T10:32:26,546   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/11/34/1eef198a596de2bbe11b5d156183d4e8853296cee4f6eccb1e93f1acfe6b/moleculekit-0.5.4-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,546   Found link https://files.pythonhosted.org/packages/b1/30/da12019468d39b9fc72b300f6bc0cbc4045ad8ccc1b8f25aa9fb7dced289/moleculekit-0.5.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.5.4
2024-03-27T10:32:26,546   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/c2/ae/6dcb36295ba009458f4ac17d3099f65f30ef7b52ee289ce857eaa09901e9/moleculekit-0.5.5-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
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2024-03-27T10:32:26,547   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/3a/53/7ae8cc33411c0f5f83d245abfeabfd81ed123a3cfbf8a500ec4d96648275/moleculekit-0.5.7-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,547   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/33/cb/c92c01bcbe6721a0de0efc2a6000170f30941c58471578d25966f935c655/moleculekit-0.5.8-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,547   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/13/6a/e73e6d343e35473a200e0744ab09efaa39adeebbbe191f752bc23d7a9b3a/moleculekit-0.5.9-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,547   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/ee/29/022155d624fde59e89cecd4a7f95e2a183d3ec0a12251cf730661ae38179/moleculekit-0.6.0-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,547   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/65/8e/ec9922bc8930ae3a78e0a98af4fe053e8c359ccedceb54ced12bb1954815/moleculekit-0.6.1-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-03-27T10:32:26,548   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/4e/11/e6c8a945d9e7bc12d1829930ad91a9ee548611b7c26387a5bb7bfc3f10f9/moleculekit-0.6.3-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
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2024-03-27T10:32:26,548   Found link https://files.pythonhosted.org/packages/ab/f4/62f8b76e0a25ee6b464bdbc1091fcd00f7a573f812621a25dd317ba75abc/moleculekit-0.6.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.6.8
2024-03-27T10:32:26,549   Found link https://files.pythonhosted.org/packages/17/1c/02715b1ba7af95549df42e637af515cc5f062c0a6fb8bdeca03404949043/moleculekit-0.7.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.7.0
2024-03-27T10:32:26,549   Found link https://files.pythonhosted.org/packages/11/db/cacac96b0834f91112e6f5773f2cab9f455deaabbc5daf37d43a7b384e30/moleculekit-0.7.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.7.1
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2024-03-27T10:32:26,555   Found link https://files.pythonhosted.org/packages/b9/00/f8d458320556166424a904edf41546e5d55d31743c27c8f63467f607ac62/moleculekit-0.9.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.5
2024-03-27T10:32:26,555   Found link https://files.pythonhosted.org/packages/c7/e6/72a4be7c3db86704ca264e68de620327a6c292f01b2fb9a9a186e0909622/moleculekit-0.9.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.6
2024-03-27T10:32:26,555   Found link https://files.pythonhosted.org/packages/5c/b2/944d529319db190e13234dd2337bff23b7a7c3c1a98b2a95eb08fc802530/moleculekit-0.9.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.7
2024-03-27T10:32:26,555   Found link https://files.pythonhosted.org/packages/42/0a/fbfa3d5c838ad716fdcb9b5ad55bddb6dccd74c5c281ac171be93b0f58e2/moleculekit-0.9.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.8
2024-03-27T10:32:26,556   Found link https://files.pythonhosted.org/packages/15/e0/93b4cc5e997a9e4e01fd39f00548f04e3f068961abba30f82fc04aa828ac/moleculekit-0.9.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.9
2024-03-27T10:32:26,556   Found link https://files.pythonhosted.org/packages/7f/58/2f04c5387c3c23e5c46f71741f7655c380b01c6f88aad7b5e945943c3fd1/moleculekit-0.9.12.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.12
2024-03-27T10:32:26,556   Found link https://files.pythonhosted.org/packages/b5/7c/fde4b7b8c9cd6683036e87727f341a0c9de5dae09f324dfa1bc2aa2a6de0/moleculekit-0.9.13.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.13
2024-03-27T10:32:26,556   Found link https://files.pythonhosted.org/packages/8e/f7/39a1290893da55d759e629ea6d9e2509fe6c3a06538d3f80cca590859647/moleculekit-0.9.14.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.14
2024-03-27T10:32:26,557   Found link https://files.pythonhosted.org/packages/02/6e/108b002ecb68c789d690492a02ced311cea625fdd642348e5cd75bd25fdb/moleculekit-0.9.15.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.15
2024-03-27T10:32:26,557   Found link https://files.pythonhosted.org/packages/62/51/f195a9d66dab99b8f6bd30fe5f65f63c65e65ded97c8fd20bf0cda822ee1/moleculekit-0.10.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.10.0
2024-03-27T10:32:26,557   Found link https://files.pythonhosted.org/packages/19/73/98bfd38e7d5823dc1d21ca3557d9f599b09926d252b22e215688677fe1eb/moleculekit-1.0.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.0
2024-03-27T10:32:26,557   Found link https://files.pythonhosted.org/packages/fc/d7/f3aa2dd40f165c1b67401587414deb33e80764835dfe2abb16b9b1d167bf/moleculekit-1.0.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.1
2024-03-27T10:32:26,558   Found link https://files.pythonhosted.org/packages/19/54/5ec72761331cfeea3e48a65f0dc30f7c21ec586f6d2b904339c262abafd8/moleculekit-1.0.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.2
2024-03-27T10:32:26,558   Found link https://files.pythonhosted.org/packages/f9/12/d8febc3aa79b72ffa0ea8efb978370f58db848fba030df47ae546bccb298/moleculekit-1.0.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.3
2024-03-27T10:32:26,558   Found link https://files.pythonhosted.org/packages/07/ab/e6c8a654329cb5fc7cf2d91d47934a6f53ec8b34276e96128f9961147a6a/moleculekit-1.0.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.4
2024-03-27T10:32:26,558   Found link https://files.pythonhosted.org/packages/d3/02/1e965b08593af843878d5bc3f7cc49cf61d4c9ca3a1e07e796923fbdb65e/moleculekit-1.0.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.5
2024-03-27T10:32:26,559   Found link https://files.pythonhosted.org/packages/28/2f/61d6e171e7b0309a94b3920b2743e5b6990d24a4870a5b1caf39f0e34338/moleculekit-1.0.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.6
2024-03-27T10:32:26,559   Found link https://files.pythonhosted.org/packages/6d/1e/bbd2d882b353e673f44897179ab0b6e76df9c2a657d25d47090dbdce76d3/moleculekit-1.0.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.7
2024-03-27T10:32:26,559   Found link https://files.pythonhosted.org/packages/61/45/acbe2272378c87f0796b1ebcba0673a13acc5ed87eb0d29fa16e1bfe54cf/moleculekit-1.0.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.8
2024-03-27T10:32:26,559   Found link https://files.pythonhosted.org/packages/72/48/3df4bcf3a3e5ca9c0e05e5486c0a7da3b7d6b3ff49830d473b6e72f02443/moleculekit-1.0.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.9
2024-03-27T10:32:26,560   Found link https://files.pythonhosted.org/packages/09/29/7e58bdf57dda487be8ab4c3719ebbf31db17ad65232fc9305a20eaa3c90c/moleculekit-1.1.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.0
2024-03-27T10:32:26,560   Found link https://files.pythonhosted.org/packages/3c/b6/64b6ae76e4b562d453b31fd28678232838949d56f1dafabd12531362de23/moleculekit-1.1.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.1
2024-03-27T10:32:26,560   Found link https://files.pythonhosted.org/packages/15/f8/fb94ef622b57eea44916cbed8a838efcbbd62c9732879ec4864c3abaf3d0/moleculekit-1.1.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.2
2024-03-27T10:32:26,560   Found link https://files.pythonhosted.org/packages/85/87/2264a91838fc8d44f1661b9ae462976e2b9b23f002591db7be9287f51d43/moleculekit-1.1.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.4
2024-03-27T10:32:26,561   Found link https://files.pythonhosted.org/packages/f4/53/156ee257b5781f55228ef884eec2b57cc368dbf37c4654315347af0e7a71/moleculekit-1.1.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.6
2024-03-27T10:32:26,561   Found link https://files.pythonhosted.org/packages/71/3c/15df00803c890b9d17390a31c60fa2c070a88e8a8c33c79ef10ddf023159/moleculekit-1.1.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.7
2024-03-27T10:32:26,561   Found link https://files.pythonhosted.org/packages/eb/2e/c50f42aefc5f3510073bd5059723baff738a5ee171174441586000c444dc/moleculekit-1.1.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.8
2024-03-27T10:32:26,562   Found link https://files.pythonhosted.org/packages/59/b9/6e9913fc67fa6321d5c441eb59a93e257f1fba383848a6bd645a7d427045/moleculekit-1.1.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.9
2024-03-27T10:32:26,562   Found link https://files.pythonhosted.org/packages/06/90/69685dad023515e231d8da7747793f33c497bb62496c4075e518f230da55/moleculekit-1.2.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.0
2024-03-27T10:32:26,562   Found link https://files.pythonhosted.org/packages/1a/07/36426e9820ea0ecff884e15fc9ebe413735a2b22a9212cdcbb9b62e56744/moleculekit-1.2.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.1
2024-03-27T10:32:26,562   Found link https://files.pythonhosted.org/packages/a1/56/2e1ac2fac4f566abf327baf326d17421047e363138c1c132a537a3eaf5ec/moleculekit-1.2.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.2
2024-03-27T10:32:26,563   Found link https://files.pythonhosted.org/packages/cb/28/b8fa8b94edf207d206627fcb18753ce3fad1450d7d5e5b052daa211b226b/moleculekit-1.2.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.4
2024-03-27T10:32:26,563   Found link https://files.pythonhosted.org/packages/cb/c9/8d7c9c427863a8e1be9e5487520f26a4ea63a34e735a3c5598f1e8b43cb4/moleculekit-1.2.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.5
2024-03-27T10:32:26,563   Found link https://files.pythonhosted.org/packages/39/b3/50e46e2780075c4adf93bba603ad047457f3d9cd70a77f4909776ec446b3/moleculekit-1.2.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.7
2024-03-27T10:32:26,564   Found link https://files.pythonhosted.org/packages/29/f1/10cd916b3024b2efe08c06413dff5938859e01c8bc671cde8bf070758031/moleculekit-1.2.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.8
2024-03-27T10:32:26,564   Found link https://files.pythonhosted.org/packages/47/55/207179562e46a3cba4a1cb813c1754be6c5a1664a11d1dcffe89b51c1ca4/moleculekit-1.2.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.9
2024-03-27T10:32:26,564   Found link https://files.pythonhosted.org/packages/2e/1c/a07b4d5f471fc90ba12e88e44675ddbf0ba4b0a658c2fc014491a7a27092/moleculekit-1.3.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.0
2024-03-27T10:32:26,564   Found link https://files.pythonhosted.org/packages/80/9b/d0375ea58246506494224acf560e8d2da623d1635047089316a01ab146a0/moleculekit-1.3.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.1
2024-03-27T10:32:26,565   Found link https://files.pythonhosted.org/packages/f9/f6/5808fddfaeeb3c021514c45f1b896329245c2e1c6218a86b9bc9f1904d7d/moleculekit-1.3.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.3
2024-03-27T10:32:26,565   Found link https://files.pythonhosted.org/packages/0f/87/45be2661273532639b9aef46f7335ef962ac0f4d5a022cad9fae46b3ed76/moleculekit-1.3.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.4
2024-03-27T10:32:26,565   Found link https://files.pythonhosted.org/packages/0b/c2/d5b36c664c2d4f8736b5dbf06b05d9efeeacd4d488125c8feb0e4efb3594/moleculekit-1.3.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.5
2024-03-27T10:32:26,566   Found link https://files.pythonhosted.org/packages/30/3d/7f0577f2f4fd87df9160c6c80c49fe7d025f40b9f25c6b6d9ed0bcd2341f/moleculekit-1.3.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.7
2024-03-27T10:32:26,566   Found link https://files.pythonhosted.org/packages/1a/fd/3788664397288c8169d713da13ae2419a0534a9ee826d1ce718811e27569/moleculekit-1.3.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.8
2024-03-27T10:32:26,566   Found link https://files.pythonhosted.org/packages/fe/a6/b9b3e9ec27de783731911f111354a9d1e6cd766e47aeff934b769a415311/moleculekit-1.3.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.9
2024-03-27T10:32:26,566   Found link https://files.pythonhosted.org/packages/fd/8d/5420b8fc8713c9a27e74eb85aab9b758169f739c0d6aca1540d73582aba6/moleculekit-1.4.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.4.0
2024-03-27T10:32:26,567   Found link https://files.pythonhosted.org/packages/68/7e/cd023ea3b0a765a65611a8b103d51dbb55fc97bb9df335095d520ad46deb/moleculekit-1.4.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.4.1
2024-03-27T10:32:26,567   Found link https://files.pythonhosted.org/packages/21/ce/d98ddf9106565632f876b1b853bb23c64534e65884b9d3d73208c7fe17e6/moleculekit-1.4.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.4.2
2024-03-27T10:32:26,567   Found link https://files.pythonhosted.org/packages/f9/12/68450058da1b4f39328ce41f22cfb5a38717147b3e624cb76b225318dd96/moleculekit-1.4.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.4.3
2024-03-27T10:32:26,567   Found link https://files.pythonhosted.org/packages/a1/9c/61a877e38393372a16746096dc836e3a24d0fe31240644258396f6ec1dd5/moleculekit-1.4.5-1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.4.5-1
2024-03-27T10:32:26,568   Found link https://files.pythonhosted.org/packages/65/2b/f8fbac2b196d899066e4d26b78e62adc1f2356734b3de63da153e9b18e44/moleculekit-1.4.6.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.4.6
2024-03-27T10:32:26,569   Found link https://files.pythonhosted.org/packages/6b/80/69b1d49f78060edafdb9a5e49080f189c6d72a7a2a83f2567f7abfaf9fcb/moleculekit-1.4.7.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.4.7
2024-03-27T10:32:26,569   Found link https://files.pythonhosted.org/packages/91/bd/4e692bc271e6a957732a20347e43f0388e12ab60df6717a178b628f18fce/moleculekit-1.4.8.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.4.8
2024-03-27T10:32:26,570   Found link https://files.pythonhosted.org/packages/0b/22/49372d8ecca8baa50e08ca3971786e207825556920bd5b19697d085bf681/moleculekit-1.4.9.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.4.9
2024-03-27T10:32:26,570   Found link https://files.pythonhosted.org/packages/3a/52/c87b6f8651063e38a723e8506788475ecf32f2b2e67fcf42739e8737f120/moleculekit-1.5.0.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.0
2024-03-27T10:32:26,571   Found link https://files.pythonhosted.org/packages/e9/64/50b82745c79e8f28fb8c1615e637221dceb4af565af8e785b04b5c9bd7f0/moleculekit-1.5.1.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.1
2024-03-27T10:32:26,571   Found link https://files.pythonhosted.org/packages/3d/18/e249854f20e449b9890eca08ef37ccdb87f719b6ac0db8e9d2ca9c4eb890/moleculekit-1.5.2.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.2
2024-03-27T10:32:26,572   Found link https://files.pythonhosted.org/packages/3f/e8/860f3b89afd29b5ba405ab028f3d49ac22e95557b6b906e475c2f6558df5/moleculekit-1.5.3.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.3
2024-03-27T10:32:26,572   Found link https://files.pythonhosted.org/packages/e7/1e/8f982d3446852e3778250fc8af491eb3ceaf081b891eb7a4936776dfe730/moleculekit-1.5.4.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.4
2024-03-27T10:32:26,573   Found link https://files.pythonhosted.org/packages/46/81/f7be4e086eb469d0fda5d9be51c6fe2107d39c4127f64218774c40f5923a/moleculekit-1.5.5.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.5
2024-03-27T10:32:26,574   Found link https://files.pythonhosted.org/packages/d1/99/5866f661f25b1168804a5c26ab38edd26a7239d91b84c13fb129c1f84ab6/moleculekit-1.5.6.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.6
2024-03-27T10:32:26,574   Found link https://files.pythonhosted.org/packages/25/45/e228ef66e7b03b1613382490f07c3db31c9713e3878eb9766781076b8209/moleculekit-1.5.7.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.7
2024-03-27T10:32:26,575   Found link https://files.pythonhosted.org/packages/5e/4a/8e20ee9556cfcdc8c51aac44a054b76db1b9abf8c83124f51521397f7673/moleculekit-1.5.8.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.8
2024-03-27T10:32:26,575   Found link https://files.pythonhosted.org/packages/00/79/eafaf1a45594ebe0f5e3e3a775bb8e4635dd46e63a048cc577a4e3c4c29b/moleculekit-1.6.0.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.0
2024-03-27T10:32:26,576   Found link https://files.pythonhosted.org/packages/c2/66/b802cbaa73639d3fb24d7aca0a21b932bd6b781103c3aa0662fd27dd64e0/moleculekit-1.6.1.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.1
2024-03-27T10:32:26,576   Found link https://files.pythonhosted.org/packages/01/31/1debf4b7c89e0060dc1f7d19ab348e627b9183890a8e443c1ee54ee3bd6c/moleculekit-1.6.4.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.4
2024-03-27T10:32:26,577   Found link https://files.pythonhosted.org/packages/d6/3a/77427acaba2c2b4670a4b94ce5cd161b60ac547e812a6337374265f3272d/moleculekit-1.6.5.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.5
2024-03-27T10:32:26,577   Found link https://files.pythonhosted.org/packages/75/c9/3ed46001d1cc28d02ee2ee30de3377bc39f9545ea0a7b7932b6c31770879/moleculekit-1.6.6.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.6
2024-03-27T10:32:26,578   Found link https://files.pythonhosted.org/packages/b0/eb/47f199ab494f4a3929e1265222e24dcfce4dc2dde54923d1be8e513bf765/moleculekit-1.6.7.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.7
2024-03-27T10:32:26,578   Found link https://files.pythonhosted.org/packages/02/62/8710bf8c331f6c5d3320bcd99ce1f53fd72c8ed39767e69fe09127926c58/moleculekit-1.6.8.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.8
2024-03-27T10:32:26,579   Found link https://files.pythonhosted.org/packages/bd/54/7eaec59ff225b186934cbe0ea2e709af1864cac674dc9c8f2e7cf2d8adeb/moleculekit-1.6.9.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.9
2024-03-27T10:32:26,579   Found link https://files.pythonhosted.org/packages/3d/e9/5d17d4e81b5894b9ace33d43b373881813b8a68b0a1365d7590990c5c370/moleculekit-1.7.0.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.0
2024-03-27T10:32:26,580   Found link https://files.pythonhosted.org/packages/4e/3a/29fb1aa0e3792fef88348885348370f39af453fb75d5505a208068d1c4ac/moleculekit-1.7.1.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.1
2024-03-27T10:32:26,581   Found link https://files.pythonhosted.org/packages/4a/13/dd6711d592d27e604c48830300f5596aafa1bbc479dc5eb49ed9797085eb/moleculekit-1.7.2.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.2
2024-03-27T10:32:26,581   Found link https://files.pythonhosted.org/packages/c7/cb/205d8925276863e2892c2c1ae2747cd4834cd3f174521172670ce43b50b8/moleculekit-1.7.3.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.3
2024-03-27T10:32:26,582   Found link https://files.pythonhosted.org/packages/6f/9e/2bce5993679a3666fd12803b93bb9a4daa59922f0ecdd26e9726df5d7f73/moleculekit-1.7.4.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.4
2024-03-27T10:32:26,582   Found link https://files.pythonhosted.org/packages/fa/63/993d55964a5afc9417ca31ab06a7d08f10b8fb38c63157bef0f350b4bb49/moleculekit-1.7.6.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.6
2024-03-27T10:32:26,583   Found link https://files.pythonhosted.org/packages/9b/3d/351d6444550ae455f20139e1d71ab138449c75b4a9782ac831dc9c6daa76/moleculekit-1.7.7.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.7
2024-03-27T10:32:26,583   Found link https://files.pythonhosted.org/packages/1b/7a/80d740239c506d7eea7cdba7576c503012556338861c10d5d2908e1912f7/moleculekit-1.7.8.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.8
2024-03-27T10:32:26,584   Found link https://files.pythonhosted.org/packages/05/e0/64dd3801f9b9cd011f8093d85201df3b259bab3502b87b6e37edadea0f21/moleculekit-1.7.9.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.9
2024-03-27T10:32:26,584   Found link https://files.pythonhosted.org/packages/0e/fd/650680f6dcf164b179c8a334c56fc7ba97d71519330f03bdc485307b6a0d/moleculekit-1.7.10.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.10
2024-03-27T10:32:26,585   Found link https://files.pythonhosted.org/packages/37/05/3105db0d4a63b49d0f4534b5e9d6a488b96b83b3aac621224338f3a6aa6b/moleculekit-1.7.12.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.12
2024-03-27T10:32:26,585   Found link https://files.pythonhosted.org/packages/08/ec/48d8122fea93c59592ae22dc29f16496087cdf31064793e6da173fcf2e36/moleculekit-1.7.13.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.13
2024-03-27T10:32:26,586   Found link https://files.pythonhosted.org/packages/46/79/442f4846c44e99a4e5d61b09e65cb57ec69b24ae4bf7e8b704f125238c6c/moleculekit-1.7.14.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.14
2024-03-27T10:32:26,587   Found link https://files.pythonhosted.org/packages/fa/fd/aa5c1911df4cf3bee9575fbc1cdbd39bcb1d9164e77c772fa938be672cc0/moleculekit-1.7.15.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.15
2024-03-27T10:32:26,587   Found link https://files.pythonhosted.org/packages/38/fe/74b265e75deb09844035690d506614163cd262a2d6bc7c83b4e2f28d4bb9/moleculekit-1.7.16.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.16
2024-03-27T10:32:26,588   Found link https://files.pythonhosted.org/packages/8b/2f/56c308933a9652bc40c41a53d57509ef38cc3c21d55b6f5570c2d9a865ed/moleculekit-1.7.17.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.17
2024-03-27T10:32:26,588   Found link https://files.pythonhosted.org/packages/96/a3/11b655506ce842ebea0b6d4c86883a538095687cb7bc9c4a179420971bd7/moleculekit-1.8.1.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.1
2024-03-27T10:32:26,589   Found link https://files.pythonhosted.org/packages/9d/d3/ead35117c0f3b3b1be847d561ff31bf59dfde0c49982bff106a3cc3876f0/moleculekit-1.8.2.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.2
2024-03-27T10:32:26,589   Found link https://files.pythonhosted.org/packages/23/e8/3ebe2bfb667296b1c79d4e59fdfb487116bfd8bec579ca242eec7ecad0c2/moleculekit-1.8.3.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.3
2024-03-27T10:32:26,590   Found link https://files.pythonhosted.org/packages/6f/4d/4a0e90a65d79829ae0bec8d857de2f8b7e18b6d60e05daa99cdbed0061c0/moleculekit-1.8.4.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.4
2024-03-27T10:32:26,590   Found link https://files.pythonhosted.org/packages/15/bb/f88884d7710aeb6290c69f180df912ce73beb4975ceea9f58aa28250737c/moleculekit-1.8.5.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.5
2024-03-27T10:32:26,591   Found link https://files.pythonhosted.org/packages/e4/a8/ef9f25e6e42436ceaecfd8bb0aadbf40855976374a46b8cf8d55000fa0a8/moleculekit-1.8.6.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.6
2024-03-27T10:32:26,591   Found link https://files.pythonhosted.org/packages/67/c5/ed682f5ea9a16915b98612e0b274b50303bb912ccb71ab106247e01be8c2/moleculekit-1.8.7.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.7
2024-03-27T10:32:26,592   Found link https://files.pythonhosted.org/packages/23/cd/efd06d75f4a0e866e23156ca3c771c99a22bcfb5f2d1b0f42f853b9cfd27/moleculekit-1.8.10.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.10
2024-03-27T10:32:26,592   Found link https://files.pythonhosted.org/packages/d2/1a/935247798d3097c5093e33b026729b2e218fefd40f58c4b8b8bd3fcf93b4/moleculekit-1.8.13.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.13
2024-03-27T10:32:26,593   Found link https://files.pythonhosted.org/packages/b0/1c/de17759f3cbae5b6b06b60242724a93570b332f657fdeff9e582b6bda391/moleculekit-1.8.14.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.14
2024-03-27T10:32:26,594   Found link https://files.pythonhosted.org/packages/20/a3/7476dceb769dd7bb318d84590a372f1974e978cefb204da16f2b4d99a34e/moleculekit-1.8.15.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.15
2024-03-27T10:32:26,594   Found link https://files.pythonhosted.org/packages/ce/8d/e060616d8e4e03f56d544939f3ccea7f3d665038a66bbf57ba0bcd1f4711/moleculekit-1.8.17.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.17
2024-03-27T10:32:26,595   Found link https://files.pythonhosted.org/packages/36/66/5b4a8da5461b4547e9b3e58f477ddf359701865a7e2ca5b0348fa20f54ae/moleculekit-1.8.18.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.18
2024-03-27T10:32:26,595   Found link https://files.pythonhosted.org/packages/51/33/5a8b10a29ca3c7a893f4a727341611121bc5ec9e2e0004e0c0d4748e33f7/moleculekit-1.8.19.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.19
2024-03-27T10:32:26,596   Found link https://files.pythonhosted.org/packages/0c/02/8cb68afa12c5dac1a7e486d39e9017883f51e17c4fd781898edf79cd2f00/moleculekit-1.8.20.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.20
2024-03-27T10:32:26,596   Found link https://files.pythonhosted.org/packages/65/3f/75e14ea7f71098018974144579774255fc66d1b7f7dae2ff858a87aac1e7/moleculekit-1.8.21.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.21
2024-03-27T10:32:26,597   Found link https://files.pythonhosted.org/packages/2c/2f/d00d1cf86239c509fb4dce470fcaf771e332724034b7db1846332924366a/moleculekit-1.8.22.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.22
2024-03-27T10:32:26,597   Found link https://files.pythonhosted.org/packages/55/ad/3c392a8ef92f6437da30769f6b9770591c79b77604db9aa264d5c0291edf/moleculekit-1.8.23.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.23
2024-03-27T10:32:26,598   Found link https://files.pythonhosted.org/packages/64/72/c2549970c717c236688863287da25f453fbf8b3ea3dee071af9e96be6592/moleculekit-1.8.24.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.24
2024-03-27T10:32:26,598   Found link https://files.pythonhosted.org/packages/f2/d0/2c92a559a74562405f0628bc7880908412790a87c494c9b73e3962c7baa9/moleculekit-1.8.26.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.26
2024-03-27T10:32:26,599   Found link https://files.pythonhosted.org/packages/0e/be/42a9eff89e9e0c3bc08940ead6c991f366ce109bb75ece11cc3b2996d001/moleculekit-1.8.27.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.27
2024-03-27T10:32:26,600   Found link https://files.pythonhosted.org/packages/30/bd/5ed4ddd1b8934c0594027c765bab0013b8081e818e92c2a98462f64d4dcd/moleculekit-1.8.28.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.28
2024-03-27T10:32:26,600   Found link https://files.pythonhosted.org/packages/2a/f9/1d7fe1a09e04049ace7db33faf27c26478ba9674a3cb39d1115fcd1d0679/moleculekit-1.8.29.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.29
2024-03-27T10:32:26,601 Fetching project page and analyzing links: https://www.piwheels.org/simple/moleculekit/
2024-03-27T10:32:26,601 Getting page https://www.piwheels.org/simple/moleculekit/
2024-03-27T10:32:26,602 Found index url https://www.piwheels.org/simple/
2024-03-27T10:32:26,673 Fetched page https://www.piwheels.org/simple/moleculekit/ as text/html
2024-03-27T10:32:26,766   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.28-cp311-cp311-linux_armv6l.whl#sha256=0bd78844c5d2c1631992bbe75050af4b5c6a7c95431e8637867fb30717804582 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-03-27T10:32:26,766   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.28-cp311-cp311-linux_armv7l.whl#sha256=0bd78844c5d2c1631992bbe75050af4b5c6a7c95431e8637867fb30717804582 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-03-27T10:32:26,767   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.27-cp311-cp311-linux_armv6l.whl#sha256=8a573033f33f4f16ba75cf9a05329b6842b25a3947b5cfd1a5c439e7a837fa1a (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-03-27T10:32:26,767   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.27-cp311-cp311-linux_armv7l.whl#sha256=8a573033f33f4f16ba75cf9a05329b6842b25a3947b5cfd1a5c439e7a837fa1a (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-03-27T10:32:26,767   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.27-cp39-cp39-linux_armv6l.whl#sha256=0e7b2ee30b7a5ead76d5e0591629b4c746dd586ec0da5b68f13ab66169217a9a (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-03-27T10:32:26,767   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.27-cp39-cp39-linux_armv7l.whl#sha256=0e7b2ee30b7a5ead76d5e0591629b4c746dd586ec0da5b68f13ab66169217a9a (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-03-27T10:32:26,767   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.26-cp311-cp311-linux_armv6l.whl#sha256=49f97c74078233f9b9c45b8e685536e701ae768f527b1c4a6c6a09be4faa18e9 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-03-27T10:32:26,768   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.26-cp311-cp311-linux_armv7l.whl#sha256=49f97c74078233f9b9c45b8e685536e701ae768f527b1c4a6c6a09be4faa18e9 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-03-27T10:32:26,768   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.26-cp39-cp39-linux_armv6l.whl#sha256=383042586b9089491f7fb534cdbcab48294ebddbd0a60b4a87bd929a5a47d553 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-03-27T10:32:26,768   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.26-cp39-cp39-linux_armv7l.whl#sha256=383042586b9089491f7fb534cdbcab48294ebddbd0a60b4a87bd929a5a47d553 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-03-27T10:32:26,768   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.24-cp311-cp311-linux_armv6l.whl#sha256=4c7c0ad147877ad9858b28bbf91bac3c9c52fc1b86d17b5cbb395816826d5795 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-03-27T10:32:26,768   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.24-cp311-cp311-linux_armv7l.whl#sha256=4c7c0ad147877ad9858b28bbf91bac3c9c52fc1b86d17b5cbb395816826d5795 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-03-27T10:32:26,768   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.24-cp39-cp39-linux_armv6l.whl#sha256=fc16c6b9060deb49db4377faa53c9889cbab863b3abe9c4ed14a551a51d9cd2d (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-03-27T10:32:26,769   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.24-cp39-cp39-linux_armv7l.whl#sha256=fc16c6b9060deb49db4377faa53c9889cbab863b3abe9c4ed14a551a51d9cd2d (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-03-27T10:32:26,769   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.23-cp311-cp311-linux_armv6l.whl#sha256=877765dd6aa49fb42e14a561a757833a39111f4f01238ad7b2d0297d4c4a48e5 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-03-27T10:32:26,769   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.23-cp311-cp311-linux_armv7l.whl#sha256=877765dd6aa49fb42e14a561a757833a39111f4f01238ad7b2d0297d4c4a48e5 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-03-27T10:32:26,769   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.23-cp39-cp39-linux_armv6l.whl#sha256=e41ba043b751ba58de8540c1979ac62e2673162ec1f06d8d94b8864df41a51da (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-03-27T10:32:26,769   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.23-cp39-cp39-linux_armv7l.whl#sha256=e41ba043b751ba58de8540c1979ac62e2673162ec1f06d8d94b8864df41a51da (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-03-27T10:32:26,770   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.22-cp311-cp311-linux_armv6l.whl#sha256=d8ea2f2f8a098e1d7c5fadaf1388bb018198ab94f1c54c9664724654a10d60f7 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-03-27T10:32:26,770   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.22-cp311-cp311-linux_armv7l.whl#sha256=d8ea2f2f8a098e1d7c5fadaf1388bb018198ab94f1c54c9664724654a10d60f7 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-03-27T10:32:26,770   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.22-cp39-cp39-linux_armv6l.whl#sha256=cf4ada47c2ea30339425f65c3707cc59e00ed62cca2560b1aebadd2639a198ab (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-03-27T10:32:26,770   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.22-cp39-cp39-linux_armv7l.whl#sha256=cf4ada47c2ea30339425f65c3707cc59e00ed62cca2560b1aebadd2639a198ab (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-03-27T10:32:26,770   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.21-cp311-cp311-linux_armv6l.whl#sha256=03de975f4606a6b37e60bcdb2357aa334c90c398875557283fe7c02b4f65dbc9 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
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2024-03-27T10:32:26,802   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.12-cp37-cp37m-linux_armv7l.whl#sha256=a871d3b206f986ddc16b14a1e59904384aea1d6936948be45d6d3d05211637c4 (from https://www.piwheels.org/simple/moleculekit/)
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2024-03-27T10:32:26,802   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.12-cp39-cp39-linux_armv7l.whl#sha256=d75d99aa397ece4f4d163fff8e78e6868ccbab4190016befc567c5f08d1cbbd4 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,803   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.9-cp37-cp37m-linux_armv6l.whl#sha256=66dbff1fb6cecaa00851b6b78480b3d8eb3f5f5d9aae539ad9397ec3dc9b22d8 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,803   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.9-cp37-cp37m-linux_armv7l.whl#sha256=66dbff1fb6cecaa00851b6b78480b3d8eb3f5f5d9aae539ad9397ec3dc9b22d8 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,803   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.9-cp39-cp39-linux_armv6l.whl#sha256=0d0004615c5da8823417816aa8e72f2ac2a2993c01c9ffa07540521dd44cdeb9 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,803   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.9-cp39-cp39-linux_armv7l.whl#sha256=0d0004615c5da8823417816aa8e72f2ac2a2993c01c9ffa07540521dd44cdeb9 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,803   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.8-cp37-cp37m-linux_armv6l.whl#sha256=e8d8fc1d3f31a50afae4252a2c403fb5b928eff4452d3954322d0d9b2d5383c5 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,804   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.8-cp37-cp37m-linux_armv7l.whl#sha256=e8d8fc1d3f31a50afae4252a2c403fb5b928eff4452d3954322d0d9b2d5383c5 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,804   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.8-cp39-cp39-linux_armv6l.whl#sha256=72aada7099cf1c7fbed38107b64c08622659cb763f35e5f2b75052a08f5cb853 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,804   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.8-cp39-cp39-linux_armv7l.whl#sha256=72aada7099cf1c7fbed38107b64c08622659cb763f35e5f2b75052a08f5cb853 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,804   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp39-cp39-linux_armv6l.whl#sha256=b1bfb9de96ef11fdd768cccd1b894300c470a7389f83c8cca3f42ac636f3dcb7 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,804   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp39-cp39-linux_armv7l.whl#sha256=b1bfb9de96ef11fdd768cccd1b894300c470a7389f83c8cca3f42ac636f3dcb7 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,804   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp37-cp37m-linux_armv6l.whl#sha256=8e98ed7e4f43a05739fbb98f22bc0aeabe5d6a76673b8883a4fa88c3762ba080 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,805   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp37-cp37m-linux_armv7l.whl#sha256=8e98ed7e4f43a05739fbb98f22bc0aeabe5d6a76673b8883a4fa88c3762ba080 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,805   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp37-cp37m-linux_armv6l.whl#sha256=881a09b6497cca181f77a3388648b0ec90974f79d8c81513666ac38dbed69842 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,805   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp37-cp37m-linux_armv7l.whl#sha256=881a09b6497cca181f77a3388648b0ec90974f79d8c81513666ac38dbed69842 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,805   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp39-cp39-linux_armv6l.whl#sha256=de2e9946d86d3e6deb732605b7b9804d3ee229e0d1e869093c26731ff1cf6e49 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,805   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp39-cp39-linux_armv7l.whl#sha256=de2e9946d86d3e6deb732605b7b9804d3ee229e0d1e869093c26731ff1cf6e49 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,806   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp37-cp37m-linux_armv6l.whl#sha256=30013f87dd3dc0c9b99cc9862ac0d0be618fe63faa7c7c4623be9cdd86396624 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,806   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp37-cp37m-linux_armv7l.whl#sha256=30013f87dd3dc0c9b99cc9862ac0d0be618fe63faa7c7c4623be9cdd86396624 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,806   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp39-cp39-linux_armv6l.whl#sha256=f42eb6c315d3242355c8e36090f1f77ed92b768cefb595178e81eb89fa5a79d5 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,806   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp39-cp39-linux_armv7l.whl#sha256=f42eb6c315d3242355c8e36090f1f77ed92b768cefb595178e81eb89fa5a79d5 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,806   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp37-cp37m-linux_armv6l.whl#sha256=a30adf43b2972eb0763ce00b18dc4dffb61a74ac1da2391652cf53f73dba67ce (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,807   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp37-cp37m-linux_armv7l.whl#sha256=a30adf43b2972eb0763ce00b18dc4dffb61a74ac1da2391652cf53f73dba67ce (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,807   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp39-cp39-linux_armv6l.whl#sha256=e123a257574ee84a677c70d154c26fb75cdf29cfb3f9491b309d8ad47e37f3c0 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,807   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp39-cp39-linux_armv7l.whl#sha256=e123a257574ee84a677c70d154c26fb75cdf29cfb3f9491b309d8ad47e37f3c0 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,807   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp39-cp39-linux_armv6l.whl#sha256=c666ea91f79ecf6c6d99ca251e7f938e7e82208a01a91d39b827ba64eee4ce41 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,807   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp39-cp39-linux_armv7l.whl#sha256=c666ea91f79ecf6c6d99ca251e7f938e7e82208a01a91d39b827ba64eee4ce41 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,807   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp37-cp37m-linux_armv6l.whl#sha256=286faceca4683f35ce8e9aeefefdecee1c02150dfc9b7deb62015ce17f3f557c (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,808   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp37-cp37m-linux_armv7l.whl#sha256=286faceca4683f35ce8e9aeefefdecee1c02150dfc9b7deb62015ce17f3f557c (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,808   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp37-cp37m-linux_armv6l.whl#sha256=e7e709fde2552ca5cb602bf420ed89d740b1e75bd32c879ee33ffe3b747b109a (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,808   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp37-cp37m-linux_armv7l.whl#sha256=e7e709fde2552ca5cb602bf420ed89d740b1e75bd32c879ee33ffe3b747b109a (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,808   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp39-cp39-linux_armv6l.whl#sha256=390edc2399f77605c97d9fc8db3b63f282ba297c67fe9514db91ebec945fa2d7 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,808   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp39-cp39-linux_armv7l.whl#sha256=390edc2399f77605c97d9fc8db3b63f282ba297c67fe9514db91ebec945fa2d7 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,809   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp39-cp39-linux_armv6l.whl#sha256=aed227f0c49804421d71b6c949c0d24367a74207b8f855c59e4e73a89b5a93ed (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,809   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp39-cp39-linux_armv7l.whl#sha256=aed227f0c49804421d71b6c949c0d24367a74207b8f855c59e4e73a89b5a93ed (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,809   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp37-cp37m-linux_armv6l.whl#sha256=ad67f1f622d2a2a49358691e3e784e48277aa09cf1f984ed60e847892a3413d7 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,809   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp37-cp37m-linux_armv7l.whl#sha256=ad67f1f622d2a2a49358691e3e784e48277aa09cf1f984ed60e847892a3413d7 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,809   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp37-cp37m-linux_armv6l.whl#sha256=ab05d1bc06d0d249cbb4871d51e6dca4b9e8474288d86326bd7dd603b9b99820 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,809   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp37-cp37m-linux_armv7l.whl#sha256=ab05d1bc06d0d249cbb4871d51e6dca4b9e8474288d86326bd7dd603b9b99820 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,810   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp39-cp39-linux_armv6l.whl#sha256=7f76858d50e6bb4611f32f053be82003c583d01ad83aa44b6f220dce89a7856f (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,810   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp39-cp39-linux_armv7l.whl#sha256=7f76858d50e6bb4611f32f053be82003c583d01ad83aa44b6f220dce89a7856f (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,810   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp37-cp37m-linux_armv6l.whl#sha256=34809734c61c1fcc4c4de1857dadfb84e726cbfe0dd0b60fce249166d29a3bb2 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,810   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp37-cp37m-linux_armv7l.whl#sha256=34809734c61c1fcc4c4de1857dadfb84e726cbfe0dd0b60fce249166d29a3bb2 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,810   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp39-cp39-linux_armv6l.whl#sha256=0f20a256b92c66dbaac370cf1a01b885b10f1371beacaec65ec35ce8ac935afb (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,811   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp39-cp39-linux_armv7l.whl#sha256=0f20a256b92c66dbaac370cf1a01b885b10f1371beacaec65ec35ce8ac935afb (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,811   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp37-cp37m-linux_armv6l.whl#sha256=93f57ab9c01697fb9f28ed39e4c5c32828e862bf410f556fdbc43c7a72825cb2 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,811   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp37-cp37m-linux_armv7l.whl#sha256=93f57ab9c01697fb9f28ed39e4c5c32828e862bf410f556fdbc43c7a72825cb2 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,811   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp39-cp39-linux_armv6l.whl#sha256=a8a1cb7f5b851f5f58273e5d12aa871e5086f6bfd844f33f0b4bf20c83f429ec (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,811   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp39-cp39-linux_armv7l.whl#sha256=a8a1cb7f5b851f5f58273e5d12aa871e5086f6bfd844f33f0b4bf20c83f429ec (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,811   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp37-cp37m-linux_armv6l.whl#sha256=25d1bdfd25f377e21e8a522d9f3cd2ce3896cf857957c8ec876c69f4de8d53f5 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,812   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp37-cp37m-linux_armv7l.whl#sha256=25d1bdfd25f377e21e8a522d9f3cd2ce3896cf857957c8ec876c69f4de8d53f5 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,812   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp39-cp39-linux_armv6l.whl#sha256=de79a8099ce28793ecc89cf8dfbcb6542a270d00290c96903280f704e2ec22e7 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,812   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp39-cp39-linux_armv7l.whl#sha256=de79a8099ce28793ecc89cf8dfbcb6542a270d00290c96903280f704e2ec22e7 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,812   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp37-cp37m-linux_armv6l.whl#sha256=2d64935710bb05965f486f3bd9f258d8d479dc5c00dc1535ba5e285c8786dcf1 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,812   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp37-cp37m-linux_armv7l.whl#sha256=2d64935710bb05965f486f3bd9f258d8d479dc5c00dc1535ba5e285c8786dcf1 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,813   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp39-cp39-linux_armv6l.whl#sha256=c1983524eecc8638287c4a1e09dda961635e861bf6f9342dc566a9f9a4c0b771 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,813   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp39-cp39-linux_armv7l.whl#sha256=c1983524eecc8638287c4a1e09dda961635e861bf6f9342dc566a9f9a4c0b771 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,813   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp39-cp39-linux_armv6l.whl#sha256=24cfa04ff95ecb68f6d261ba4176e979846a0424ba781a1e314ca233c5206ae7 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,813   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp39-cp39-linux_armv7l.whl#sha256=24cfa04ff95ecb68f6d261ba4176e979846a0424ba781a1e314ca233c5206ae7 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,813   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp37-cp37m-linux_armv6l.whl#sha256=3fa03496ffbd230b85c032f9e1ba3129efbd4c37f6509c6cfef258ce69ed6925 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,814   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp37-cp37m-linux_armv7l.whl#sha256=3fa03496ffbd230b85c032f9e1ba3129efbd4c37f6509c6cfef258ce69ed6925 (from https://www.piwheels.org/simple/moleculekit/)
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2024-03-27T10:32:26,815   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp37-cp37m-linux_armv7l.whl#sha256=b0ac5fea57fee9d962de25688ffde053c705daa15588886ea6aa7d5ab0986077 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,815   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp39-cp39-linux_armv6l.whl#sha256=1b6361e98ea6ec0f3a7a4cce9ec9569a117c26deb95d0ce2bcea9d6f1f38d503 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,815   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp39-cp39-linux_armv7l.whl#sha256=1b6361e98ea6ec0f3a7a4cce9ec9569a117c26deb95d0ce2bcea9d6f1f38d503 (from https://www.piwheels.org/simple/moleculekit/)
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2024-03-27T10:32:26,816   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.9-cp39-cp39-linux_armv6l.whl#sha256=223cbac9f53d732be3d157f8e68c124c79439d057ec079594c681d7c5327f342 (from https://www.piwheels.org/simple/moleculekit/)
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2024-03-27T10:32:26,816   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.8-cp37-cp37m-linux_armv7l.whl#sha256=19e3b710f4af1a0cb530060979c4216d87f0bd8a71e9f41824cf3565abbcbbdb (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,816   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.8-cp39-cp39-linux_armv6l.whl#sha256=c18e44dbd9cf047134d440ff4fbb18722a3fdb0f348d431e8b7bed7dd398bd6e (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,816   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.8-cp39-cp39-linux_armv7l.whl#sha256=c18e44dbd9cf047134d440ff4fbb18722a3fdb0f348d431e8b7bed7dd398bd6e (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,817   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.7-cp37-cp37m-linux_armv6l.whl#sha256=8e63b6afb6715f46aae20e77b81958cdc652a7b1b6d294c5d559f7f06d5a5106 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,817   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.7-cp37-cp37m-linux_armv7l.whl#sha256=8e63b6afb6715f46aae20e77b81958cdc652a7b1b6d294c5d559f7f06d5a5106 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,817   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.7-cp39-cp39-linux_armv6l.whl#sha256=53a48e2a1781a9ae00e1f905778bad58715b08cff2ed4605148de1e481c9d50e (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,817   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.7-cp39-cp39-linux_armv7l.whl#sha256=53a48e2a1781a9ae00e1f905778bad58715b08cff2ed4605148de1e481c9d50e (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,817   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.6-cp37-cp37m-linux_armv6l.whl#sha256=a85d0cfa7da9e3593e97f1c63822eb0a9733744fdeb19c3bbd09e1f4242e1d91 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,818   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.6-cp37-cp37m-linux_armv7l.whl#sha256=a85d0cfa7da9e3593e97f1c63822eb0a9733744fdeb19c3bbd09e1f4242e1d91 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,818   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.6-cp39-cp39-linux_armv6l.whl#sha256=d5e470ed8514697a92a69cccdc99ddf6da22ddde2cc24b3e6ed949645778116f (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,818   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.6-cp39-cp39-linux_armv7l.whl#sha256=d5e470ed8514697a92a69cccdc99ddf6da22ddde2cc24b3e6ed949645778116f (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,818   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.5-cp311-cp311-linux_armv6l.whl#sha256=901c091adc4fc8b89c9de8f139d92aeffbfb6dc91799f2f9019f61646044ddd7 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,818   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.5-cp311-cp311-linux_armv7l.whl#sha256=901c091adc4fc8b89c9de8f139d92aeffbfb6dc91799f2f9019f61646044ddd7 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,819   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.5-cp37-cp37m-linux_armv6l.whl#sha256=2670c23b960766e0d52c54881bf4a8a663345f17190e380f84a273d51c8cdb3f (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,819   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.5-cp37-cp37m-linux_armv7l.whl#sha256=2670c23b960766e0d52c54881bf4a8a663345f17190e380f84a273d51c8cdb3f (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,819   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.5-cp39-cp39-linux_armv6l.whl#sha256=55bb6252b29c31ce9b46ca6dc68ed50a4fbe0e44a1b3f8f6f57b13faf1c939c1 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,819   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.5-cp39-cp39-linux_armv7l.whl#sha256=55bb6252b29c31ce9b46ca6dc68ed50a4fbe0e44a1b3f8f6f57b13faf1c939c1 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,819   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.4-cp37-cp37m-linux_armv6l.whl#sha256=c59aab79b14443a5c4194c3a08c69a2f1a98abedfda3217c0b15e5f694cb8dc3 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,819   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.4-cp37-cp37m-linux_armv7l.whl#sha256=c59aab79b14443a5c4194c3a08c69a2f1a98abedfda3217c0b15e5f694cb8dc3 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,820   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.4-cp39-cp39-linux_armv6l.whl#sha256=8c575ac103cbab0a21e8ac9ee5d64f45634da6dcfa639e87f54e4afd333fe22f (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,820   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.4-cp39-cp39-linux_armv7l.whl#sha256=8c575ac103cbab0a21e8ac9ee5d64f45634da6dcfa639e87f54e4afd333fe22f (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,820   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.6.7-cp37-cp37m-linux_armv6l.whl#sha256=e6497cd1fa524aee3c9d431fc1556e29e1ff896a6c49eca8572fb6ffc399cd6c (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,820   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.6.7-cp37-cp37m-linux_armv7l.whl#sha256=e6497cd1fa524aee3c9d431fc1556e29e1ff896a6c49eca8572fb6ffc399cd6c (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,820   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.6.7-cp39-cp39-linux_armv6l.whl#sha256=6975400d079ca432444a3145d286b6b9c52b60c61acfbb1ad67be92f2b7a4585 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,821   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.6.7-cp39-cp39-linux_armv7l.whl#sha256=6975400d079ca432444a3145d286b6b9c52b60c61acfbb1ad67be92f2b7a4585 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,821   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.5.4-py3-none-any.whl#sha256=9ea33917985ebf7bdfdbb276c83c4b2b1be17adbefb6062cc28c7ac037e3fab8 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,821   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.5.3-py3-none-any.whl#sha256=60b48ad38d8567be173c2a4a384dd7d742cf0b9f80eac5510c5987a9e1b668b6 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,821   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.5.2-py3-none-any.whl#sha256=89c944d279cde5c1d1ea898c4495e8076b1a1c477f1594f024110adcb137070e (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,821   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.4.8-py3-none-any.whl#sha256=9f728761688514ebb5e7fbd00f93960d862d928411f697f3beaf5c05b55bcd29 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,821   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.4.7-py3-none-any.whl#sha256=0167204d0c1ad4269753d9981920d6d47d0936fa85f5a709716abe11f2f63924 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,822   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.4.6-py3-none-any.whl#sha256=aa0c660454f157d45a5709a2fe3ec7e6c79af7be1dc5866ab3497475f2197d8d (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,822   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.4.4-py3-none-any.whl#sha256=328348766e2960fdf270fdf395fcb1b60acc7f8741927b76535453e8f3731f03 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,822   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.4.3-py3-none-any.whl#sha256=cd086bf69fafb879119d434964d0fd0920aa414c2b72fd29628920d6b5615e44 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,822   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.3.4-py3-none-any.whl#sha256=a5284594c607376665fb0592efa0f7696a9d1b437641b385a939bb6e171e5b58 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,822   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.3.3-py3-none-any.whl#sha256=c7787bffc57340080dbc84bbc30cf3adbec8c10947b34a038b821fd98f93e138 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,823   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.3.2-py3-none-any.whl#sha256=0f9deb57395d35af8d9e4300bd57eb6fb5537feb62576b4df5611326e007a946 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,823   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.3.1-py3-none-any.whl#sha256=b5d47dfce102b3af0001276b5d6fda0f055e2ef4f0076a06286d3b5e4f2361b4 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,823   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.3.0-py3-none-any.whl#sha256=864f229abf24e864927569f3a17c74c39b977d8b7ba63cf2792e71f2c925eebd (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,823   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.2.9-py3-none-any.whl#sha256=76a22c44b710351a9d3c94d7e7c1d96c61e90251004b2a34cdcc92280d423a09 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,823   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.2.8-py3-none-any.whl#sha256=6bb04aee6023e232156e64c6b7dc4510dc0dd6ccc5a0ff5150e2de459d264da4 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,824   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.2.7-py3-none-any.whl#sha256=ff4f13b39afd18f94633a4d933baf6fee5e9836a09d545b8bcca21de12600b24 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,824   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.2.6-py3-none-any.whl#sha256=1642c66ce5ad47055acb7eaa76a2c208cf2e5b69c53ba3d24e4b79ebe27dc84d (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,824   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.2.5-py3-none-any.whl#sha256=bc056cd58574a951b4acf332b139c10194619398cd922d83d45906c41aab9c61 (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,824   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.2.4-py3-none-any.whl#sha256=1687bee36b78979fa8b86f947d79aaaa7781c7131df7e26128b2bfd587b790fb (from https://www.piwheels.org/simple/moleculekit/)
2024-03-27T10:32:26,824   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.2.3-py3-none-any.whl#sha256=f659548ebfafd77ecafad558800c797d4d23e6fcdb9d58e3248da593fd4d7fe7 (from https://www.piwheels.org/simple/moleculekit/)
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2024-03-27T10:32:26,829 Skipping link: not a file: https://www.piwheels.org/simple/moleculekit/
2024-03-27T10:32:26,829 Skipping link: not a file: https://pypi.org/simple/moleculekit/
2024-03-27T10:32:26,871 Given no hashes to check 1 links for project 'moleculekit': discarding no candidates
2024-03-27T10:32:26,888 Collecting moleculekit==1.8.28
2024-03-27T10:32:26,890   Created temporary directory: /tmp/pip-unpack-46up4q61
2024-03-27T10:32:26,935   Downloading moleculekit-1.8.28.tar.gz (6.8 MB)
2024-03-27T10:32:29,102   Added moleculekit==1.8.28 from https://files.pythonhosted.org/packages/30/bd/5ed4ddd1b8934c0594027c765bab0013b8081e818e92c2a98462f64d4dcd/moleculekit-1.8.28.tar.gz to build tracker '/tmp/pip-build-tracker-69q2maln'
2024-03-27T10:32:29,110   Created temporary directory: /tmp/pip-build-env-05s5fda2
2024-03-27T10:32:29,120   Installing build dependencies: started
2024-03-27T10:32:29,121   Running command pip subprocess to install build dependencies
2024-03-27T10:32:30,311   Using pip 24.0 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9)
2024-03-27T10:32:30,843   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-03-27T10:32:32,292   Collecting setuptools
2024-03-27T10:32:34,929     Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.2.0-py3-none-any.whl (821 kB)
2024-03-27T10:32:36,278   Collecting numpy>=1.18.5
2024-03-27T10:32:37,557     Using cached https://www.piwheels.org/simple/numpy/numpy-1.26.4-cp39-cp39-linux_armv7l.whl (5.6 MB)
2024-03-27T10:32:39,423   Collecting Cython>=0.29.21
2024-03-27T10:32:41,021     Using cached https://www.piwheels.org/simple/cython/Cython-3.0.9-cp39-cp39-linux_armv7l.whl (10.7 MB)
2024-03-27T10:32:41,469   Collecting toml
2024-03-27T10:32:44,216     Using cached https://www.piwheels.org/simple/toml/toml-0.10.2-py2.py3-none-any.whl (16 kB)
2024-03-27T10:32:44,351   Collecting versioneer==0.28 (from versioneer[toml]==0.28)
2024-03-27T10:32:46,962     Using cached https://www.piwheels.org/simple/versioneer/versioneer-0.28-py3-none-any.whl (45 kB)
2024-03-27T10:32:47,140   Collecting tomli (from versioneer[toml]==0.28)
2024-03-27T10:32:50,010     Using cached https://www.piwheels.org/simple/tomli/tomli-2.0.1-py3-none-any.whl (12 kB)
2024-03-27T10:32:51,908   Installing collected packages: versioneer, tomli, toml, setuptools, numpy, Cython
2024-03-27T10:32:51,945     Creating /tmp/pip-build-env-05s5fda2/overlay/bin
2024-03-27T10:32:51,947     changing mode of /tmp/pip-build-env-05s5fda2/overlay/bin/versioneer to 755
2024-03-27T10:33:01,919     changing mode of /tmp/pip-build-env-05s5fda2/overlay/bin/f2py to 755
2024-03-27T10:33:05,330     changing mode of /tmp/pip-build-env-05s5fda2/overlay/bin/cygdb to 755
2024-03-27T10:33:05,332     changing mode of /tmp/pip-build-env-05s5fda2/overlay/bin/cython to 755
2024-03-27T10:33:05,334     changing mode of /tmp/pip-build-env-05s5fda2/overlay/bin/cythonize to 755
2024-03-27T10:33:05,358   Successfully installed Cython-3.0.9 numpy-1.26.4 setuptools-69.2.0 toml-0.10.2 tomli-2.0.1 versioneer-0.28
2024-03-27T10:33:06,011   Installing build dependencies: finished with status 'done'
2024-03-27T10:33:06,015   Getting requirements to build wheel: started
2024-03-27T10:33:06,016   Running command Getting requirements to build wheel
2024-03-27T10:33:44,324   warning: moleculekit/wrapping/wrapping.pyx:47:4: Unreachable code
2024-03-27T10:33:53,366   Compiling moleculekit/interactions/hbonds/hbonds.pyx because it depends on /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2024-03-27T10:33:53,366   Compiling moleculekit/interactions/pipi/pipi.pyx because it depends on /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2024-03-27T10:33:53,367   Compiling moleculekit/interactions/cationpi/cationpi.pyx because it depends on /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2024-03-27T10:33:53,367   Compiling moleculekit/interactions/sigmahole/sigmahole.pyx because it depends on /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2024-03-27T10:33:53,367   Compiling moleculekit/wrapping/wrapping.pyx because it depends on /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2024-03-27T10:33:53,367   Compiling moleculekit/bondguesser_utils/bondguesser_utils.pyx because it depends on /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2024-03-27T10:33:53,367   Compiling moleculekit/atomselect_utils/atomselect_utils.pyx because it depends on /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2024-03-27T10:33:53,367   Compiling moleculekit/distance_utils/distance_utils.pyx because it depends on /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2024-03-27T10:33:53,367   Compiling moleculekit/occupancy_utils/occupancy_utils.pyx because it depends on /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2024-03-27T10:33:53,368   Compiling moleculekit/cython_utils/cython_utils.pyx because it depends on /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2024-03-27T10:33:53,368   Compiling moleculekit/fileformats/xtc/xtc.pyx because it depends on /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd.
2024-03-27T10:33:53,368   Compiling moleculekit/fileformats/xtc/trr.pyx because it depends on /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd.
2024-03-27T10:33:53,368   Compiling moleculekit/fileformats/dcd/dcd.pyx because it depends on /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd.
2024-03-27T10:33:53,368   Compiling moleculekit/fileformats/binpos/binpos.pyx because it depends on /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/Cython/Includes/libc/string.pxd.
2024-03-27T10:33:53,368   Compiling moleculekit/tmalign/tmalign_util.pyx because it depends on /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/Cython/Includes/libcpp/vector.pxd.
2024-03-27T10:33:53,368   [ 1/15] Cythonizing moleculekit/atomselect_utils/atomselect_utils.pyx
2024-03-27T10:33:53,369   [ 2/15] Cythonizing moleculekit/bondguesser_utils/bondguesser_utils.pyx
2024-03-27T10:33:53,369   [ 3/15] Cythonizing moleculekit/cython_utils/cython_utils.pyx
2024-03-27T10:33:53,369   [ 4/15] Cythonizing moleculekit/distance_utils/distance_utils.pyx
2024-03-27T10:33:53,369   [ 5/15] Cythonizing moleculekit/fileformats/dcd/dcd.pyx
2024-03-27T10:33:53,369   [ 6/15] Cythonizing moleculekit/interactions/cationpi/cationpi.pyx
2024-03-27T10:33:53,369   [ 7/15] Cythonizing moleculekit/interactions/hbonds/hbonds.pyx
2024-03-27T10:33:53,369   [ 8/15] Cythonizing moleculekit/interactions/pipi/pipi.pyx
2024-03-27T10:33:53,370   [ 9/15] Cythonizing moleculekit/interactions/sigmahole/sigmahole.pyx
2024-03-27T10:33:53,370   [10/15] Cythonizing moleculekit/occupancy_utils/occupancy_utils.pyx
2024-03-27T10:33:53,370   [11/15] Cythonizing moleculekit/tmalign/tmalign_util.pyx
2024-03-27T10:33:53,370   [12/15] Cythonizing moleculekit/wrapping/wrapping.pyx
2024-03-27T10:33:53,370   [13/15] Cythonizing moleculekit/fileformats/binpos/binpos.pyx
2024-03-27T10:33:53,370   [14/15] Cythonizing moleculekit/fileformats/xtc/trr.pyx
2024-03-27T10:33:53,370   [15/15] Cythonizing moleculekit/fileformats/xtc/xtc.pyx
2024-03-27T10:33:53,660   running egg_info
2024-03-27T10:33:53,666   writing moleculekit.egg-info/PKG-INFO
2024-03-27T10:33:53,670   writing dependency_links to moleculekit.egg-info/dependency_links.txt
2024-03-27T10:33:53,672   writing requirements to moleculekit.egg-info/requires.txt
2024-03-27T10:33:53,673   writing top-level names to moleculekit.egg-info/top_level.txt
2024-03-27T10:33:53,704   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,705   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,705   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,705   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,705   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,705   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,705   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,705   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,706   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,706   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,706   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,706   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,706   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,706   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,706   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,706   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,707   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,707   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,707   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,707   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,707   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,707   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,707   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,708   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,708   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,708   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,708   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,708   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,708   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,708   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,708   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,709   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,709   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,709   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,709   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,709   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,709   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,709   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,709   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,710   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,710   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,710   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,710   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,710   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,710   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,710   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,710   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
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2024-03-27T10:33:53,711   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,711   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,711   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,711   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
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2024-03-27T10:33:53,711   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,712   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,712   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,712   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,712   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,712   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,712   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
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2024-03-27T10:33:53,714   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,714   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,714   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,714   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
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2024-03-27T10:33:53,715   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
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2024-03-27T10:33:53,716   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,716   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,716   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,717   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
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2024-03-27T10:33:53,717   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:33:53,727   reading manifest file 'moleculekit.egg-info/SOURCES.txt'
2024-03-27T10:33:53,761   reading manifest template 'MANIFEST.in'
2024-03-27T10:33:54,021   no previously-included directories found matching 'moleculekit/test-data'
2024-03-27T10:33:54,022   no previously-included directories found matching 'moleculekit/tests'
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2024-03-27T10:33:54,024   adding license file 'LICENSE'
2024-03-27T10:33:54,043   writing manifest file 'moleculekit.egg-info/SOURCES.txt'
2024-03-27T10:33:55,450   Getting requirements to build wheel: finished with status 'done'
2024-03-27T10:33:55,465   Installing backend dependencies: started
2024-03-27T10:33:55,466   Running command pip subprocess to install backend dependencies
2024-03-27T10:33:56,731   Using pip 24.0 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9)
2024-03-27T10:33:57,295   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-03-27T10:33:58,093   Collecting wheel
2024-03-27T10:33:59,162     Using cached https://www.piwheels.org/simple/wheel/wheel-0.43.0-py3-none-any.whl (65 kB)
2024-03-27T10:34:00,660   Installing collected packages: wheel
2024-03-27T10:34:00,888     Creating /tmp/pip-build-env-05s5fda2/normal/bin
2024-03-27T10:34:00,890     changing mode of /tmp/pip-build-env-05s5fda2/normal/bin/wheel to 755
2024-03-27T10:34:00,903   Successfully installed wheel-0.43.0
2024-03-27T10:34:01,302   Installing backend dependencies: finished with status 'done'
2024-03-27T10:34:01,305   Created temporary directory: /tmp/pip-modern-metadata-slb_uy00
2024-03-27T10:34:01,308   Preparing metadata (pyproject.toml): started
2024-03-27T10:34:01,309   Running command Preparing metadata (pyproject.toml)
2024-03-27T10:34:03,799   running dist_info
2024-03-27T10:34:03,801   creating /tmp/pip-modern-metadata-slb_uy00/moleculekit.egg-info
2024-03-27T10:34:03,807   writing /tmp/pip-modern-metadata-slb_uy00/moleculekit.egg-info/PKG-INFO
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2024-03-27T10:34:03,851   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,851   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,851   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,852   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,852   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,852   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,852   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,852   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,852   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,852   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,852   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,853   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,853   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,853   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,853   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,853   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,853   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,853   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,853   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,854   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,854   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,854   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,854   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,854   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,855   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,856   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,856   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,856   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,856   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,857   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,857   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,857   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,857   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,857   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,858   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,858   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,858   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,858   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,859   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:03,866   reading manifest file '/tmp/pip-modern-metadata-slb_uy00/moleculekit.egg-info/SOURCES.txt'
2024-03-27T10:34:03,868   reading manifest template 'MANIFEST.in'
2024-03-27T10:34:04,142   no previously-included directories found matching 'moleculekit/test-data'
2024-03-27T10:34:04,143   no previously-included directories found matching 'moleculekit/tests'
2024-03-27T10:34:04,143   no previously-included directories found matching 'package'
2024-03-27T10:34:04,144   adding license file 'LICENSE'
2024-03-27T10:34:04,157   writing manifest file '/tmp/pip-modern-metadata-slb_uy00/moleculekit.egg-info/SOURCES.txt'
2024-03-27T10:34:04,166   creating '/tmp/pip-modern-metadata-slb_uy00/moleculekit-1.8.28.dist-info'
2024-03-27T10:34:04,364   Preparing metadata (pyproject.toml): finished with status 'done'
2024-03-27T10:34:04,370   Source in /tmp/pip-wheel-v_g34oqg/moleculekit_73613ac031384358a84c4f687358fb3a has version 1.8.28, which satisfies requirement moleculekit==1.8.28 from https://files.pythonhosted.org/packages/30/bd/5ed4ddd1b8934c0594027c765bab0013b8081e818e92c2a98462f64d4dcd/moleculekit-1.8.28.tar.gz
2024-03-27T10:34:04,371   Removed moleculekit==1.8.28 from https://files.pythonhosted.org/packages/30/bd/5ed4ddd1b8934c0594027c765bab0013b8081e818e92c2a98462f64d4dcd/moleculekit-1.8.28.tar.gz from build tracker '/tmp/pip-build-tracker-69q2maln'
2024-03-27T10:34:04,377 Created temporary directory: /tmp/pip-unpack-c5tgc94v
2024-03-27T10:34:04,378 Created temporary directory: /tmp/pip-unpack-2mzddfhr
2024-03-27T10:34:04,386 Building wheels for collected packages: moleculekit
2024-03-27T10:34:04,390   Created temporary directory: /tmp/pip-wheel-sd_f87kq
2024-03-27T10:34:04,391   Destination directory: /tmp/pip-wheel-sd_f87kq
2024-03-27T10:34:04,393   Building wheel for moleculekit (pyproject.toml): started
2024-03-27T10:34:04,394   Running command Building wheel for moleculekit (pyproject.toml)
2024-03-27T10:34:06,759   running bdist_wheel
2024-03-27T10:34:06,776   running build
2024-03-27T10:34:06,776   running build_py
2024-03-27T10:34:06,784   creating build
2024-03-27T10:34:06,784   creating build/lib.linux-armv7l-cpython-39
2024-03-27T10:34:06,785   creating build/lib.linux-armv7l-cpython-39/moleculekit
2024-03-27T10:34:06,787   copying moleculekit/distance.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2024-03-27T10:34:06,788   copying moleculekit/bondguesser.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2024-03-27T10:34:06,791   copying moleculekit/rcsb.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2024-03-27T10:34:06,792   copying moleculekit/_version.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2024-03-27T10:34:06,794   copying moleculekit/rdkitintegration.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2024-03-27T10:34:06,795   copying moleculekit/readers.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2024-03-27T10:34:06,799   copying moleculekit/vmdviewer.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2024-03-27T10:34:06,802   copying moleculekit/vmdgraphics.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2024-03-27T10:34:06,804   copying moleculekit/periodictable.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2024-03-27T10:34:06,806   copying moleculekit/version.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2024-03-27T10:34:06,808   copying moleculekit/align.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2024-03-27T10:34:06,810   copying moleculekit/viewer.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2024-03-27T10:34:06,812   copying moleculekit/molecule.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2024-03-27T10:34:06,816   copying moleculekit/writers.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2024-03-27T10:34:06,819   copying moleculekit/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2024-03-27T10:34:06,820   copying moleculekit/config.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2024-03-27T10:34:06,822   copying moleculekit/pymolgraphics.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2024-03-27T10:34:06,823   copying moleculekit/util.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2024-03-27T10:34:06,826   copying moleculekit/home.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2024-03-27T10:34:06,827   copying moleculekit/dihedral.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2024-03-27T10:34:06,829   copying moleculekit/opm.py -> build/lib.linux-armv7l-cpython-39/moleculekit
2024-03-27T10:34:06,832   creating build/lib.linux-armv7l-cpython-39/moleculekit/interactions
2024-03-27T10:34:06,832   copying moleculekit/interactions/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions
2024-03-27T10:34:06,834   copying moleculekit/interactions/interactions.py -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions
2024-03-27T10:34:06,837   creating build/lib.linux-armv7l-cpython-39/moleculekit/fileformats
2024-03-27T10:34:06,838   copying moleculekit/fileformats/netcdf.py -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats
2024-03-27T10:34:06,841   copying moleculekit/fileformats/utils.py -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats
2024-03-27T10:34:06,843   copying moleculekit/fileformats/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats
2024-03-27T10:34:06,845   creating build/lib.linux-armv7l-cpython-39/moleculekit/pdbx
2024-03-27T10:34:06,845   copying moleculekit/pdbx/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx
2024-03-27T10:34:06,848   creating build/lib.linux-armv7l-cpython-39/moleculekit/ply
2024-03-27T10:34:06,848   copying moleculekit/ply/lex.py -> build/lib.linux-armv7l-cpython-39/moleculekit/ply
2024-03-27T10:34:06,851   copying moleculekit/ply/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/ply
2024-03-27T10:34:06,853   copying moleculekit/ply/yacc.py -> build/lib.linux-armv7l-cpython-39/moleculekit/ply
2024-03-27T10:34:06,858   creating build/lib.linux-armv7l-cpython-39/moleculekit/atomselect
2024-03-27T10:34:06,858   copying moleculekit/atomselect/analyze.py -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect
2024-03-27T10:34:06,861   copying moleculekit/atomselect/languageparser.py -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect
2024-03-27T10:34:06,863   copying moleculekit/atomselect/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect
2024-03-27T10:34:06,864   copying moleculekit/atomselect/atomselect.py -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect
2024-03-27T10:34:06,867   creating build/lib.linux-armv7l-cpython-39/moleculekit/tools
2024-03-27T10:34:06,868   copying moleculekit/tools/preparation.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2024-03-27T10:34:06,871   copying moleculekit/tools/atomtyper.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2024-03-27T10:34:06,874   copying moleculekit/tools/crystalpacking.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2024-03-27T10:34:06,876   copying moleculekit/tools/hhblitsprofile.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2024-03-27T10:34:06,878   copying moleculekit/tools/preparation_customres.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2024-03-27T10:34:06,880   copying moleculekit/tools/sequencestructuralalignment.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2024-03-27T10:34:06,882   copying moleculekit/tools/voxeldescriptors.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2024-03-27T10:34:06,885   copying moleculekit/tools/autosegment.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2024-03-27T10:34:06,887   copying moleculekit/tools/docking.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2024-03-27T10:34:06,889   copying moleculekit/tools/moleculechecks.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2024-03-27T10:34:06,891   copying moleculekit/tools/detect.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2024-03-27T10:34:06,893   copying moleculekit/tools/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2024-03-27T10:34:06,895   copying moleculekit/tools/graphalignment.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2024-03-27T10:34:06,897   copying moleculekit/tools/modelling.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools
2024-03-27T10:34:06,900   creating build/lib.linux-armv7l-cpython-39/moleculekit/projections
2024-03-27T10:34:06,901   copying moleculekit/projections/metrictmscore.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2024-03-27T10:34:06,903   copying moleculekit/projections/metricplumed2.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2024-03-27T10:34:06,906   copying moleculekit/projections/metricrmsd.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2024-03-27T10:34:06,908   copying moleculekit/projections/metricdihedral.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2024-03-27T10:34:06,910   copying moleculekit/projections/projection.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2024-03-27T10:34:06,912   copying moleculekit/projections/metriccoordinate.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2024-03-27T10:34:06,914   copying moleculekit/projections/metricsecondarystructure.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2024-03-27T10:34:06,916   copying moleculekit/projections/metricgyration.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2024-03-27T10:34:06,918   copying moleculekit/projections/metricdistance.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2024-03-27T10:34:06,921   copying moleculekit/projections/metricshell.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2024-03-27T10:34:06,923   copying moleculekit/projections/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2024-03-27T10:34:06,924   copying moleculekit/projections/metricfluctuation.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2024-03-27T10:34:06,927   copying moleculekit/projections/metricsasa.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2024-03-27T10:34:06,929   copying moleculekit/projections/util.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2024-03-27T10:34:06,931   copying moleculekit/projections/metricsphericalcoordinate.py -> build/lib.linux-armv7l-cpython-39/moleculekit/projections
2024-03-27T10:34:06,934   creating build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2024-03-27T10:34:06,934   copying moleculekit/smallmol/test_smallmollib.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2024-03-27T10:34:06,937   copying moleculekit/smallmol/test_smallmol.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2024-03-27T10:34:06,939   copying moleculekit/smallmol/smallmollib.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2024-03-27T10:34:06,941   copying moleculekit/smallmol/smallmol.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2024-03-27T10:34:06,944   copying moleculekit/smallmol/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2024-03-27T10:34:06,946   copying moleculekit/smallmol/util.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol
2024-03-27T10:34:06,948   creating build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader
2024-03-27T10:34:06,949   copying moleculekit/pdbx/reader/PdbxContainers.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader
2024-03-27T10:34:06,952   copying moleculekit/pdbx/reader/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader
2024-03-27T10:34:06,953   copying moleculekit/pdbx/reader/PdbxReader.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader
2024-03-27T10:34:06,956   copying moleculekit/pdbx/reader/PdbxParser.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader
2024-03-27T10:34:06,958   creating build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/writer
2024-03-27T10:34:06,959   copying moleculekit/pdbx/writer/PdbxWriter.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/writer
2024-03-27T10:34:06,961   copying moleculekit/pdbx/writer/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/writer
2024-03-27T10:34:06,963   creating build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests
2024-03-27T10:34:06,964   copying moleculekit/pdbx/tests/PdbxReaderTests.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests
2024-03-27T10:34:06,966   copying moleculekit/pdbx/tests/PdbxReadWriteTests.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests
2024-03-27T10:34:06,968   copying moleculekit/pdbx/tests/PdbxWriterTests.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests
2024-03-27T10:34:06,970   copying moleculekit/pdbx/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests
2024-03-27T10:34:06,972   creating build/lib.linux-armv7l-cpython-39/moleculekit/tools/obabel_tools
2024-03-27T10:34:06,973   copying moleculekit/tools/obabel_tools/obabel_cli.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools/obabel_tools
2024-03-27T10:34:06,975   copying moleculekit/tools/obabel_tools/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/tools/obabel_tools
2024-03-27T10:34:06,977   creating build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools
2024-03-27T10:34:06,978   copying moleculekit/smallmol/tools/clustering.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools
2024-03-27T10:34:06,980   copying moleculekit/smallmol/tools/restrainedembed.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools
2024-03-27T10:34:06,982   copying moleculekit/smallmol/tools/__init__.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools
2024-03-27T10:34:06,983   copying moleculekit/smallmol/tools/test_tools.py -> build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools
2024-03-27T10:34:06,985   running egg_info
2024-03-27T10:34:06,991   writing moleculekit.egg-info/PKG-INFO
2024-03-27T10:34:06,994   writing dependency_links to moleculekit.egg-info/dependency_links.txt
2024-03-27T10:34:06,995   writing requirements to moleculekit.egg-info/requires.txt
2024-03-27T10:34:06,996   writing top-level names to moleculekit.egg-info/top_level.txt
2024-03-27T10:34:07,015   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,015   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,015   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,015   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,015   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,016   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,016   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,016   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,016   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,016   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,016   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,016   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,017   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,017   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,017   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,017   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,017   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,017   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,017   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,017   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,018   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,018   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,018   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,018   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,018   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,018   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,018   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,019   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,019   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,019   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,019   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,019   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,019   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,019   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,019   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,020   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,020   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,020   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,020   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,020   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,020   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,020   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,021   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,021   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,021   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,021   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,021   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,021   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,021   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,022   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,022   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,022   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,022   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,022   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,022   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,022   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,023   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,023   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,023   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,023   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,024   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,025   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,025   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,025   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,025   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,026   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,026   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,026   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,026   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,026   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,027   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,027   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,027   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,027   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,028   dependency /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-03-27T10:34:07,034   reading manifest file 'moleculekit.egg-info/SOURCES.txt'
2024-03-27T10:34:07,044   reading manifest template 'MANIFEST.in'
2024-03-27T10:34:07,285   no previously-included directories found matching 'moleculekit/test-data'
2024-03-27T10:34:07,287   no previously-included directories found matching 'moleculekit/tests'
2024-03-27T10:34:07,288   no previously-included directories found matching 'package'
2024-03-27T10:34:07,288   adding license file 'LICENSE'
2024-03-27T10:34:07,306   writing manifest file 'moleculekit.egg-info/SOURCES.txt'
2024-03-27T10:34:07,317   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.atomselect_utils' is absent from the `packages` configuration.
2024-03-27T10:34:07,317   !!

2024-03-27T10:34:07,317           ********************************************************************************
2024-03-27T10:34:07,317           ############################
2024-03-27T10:34:07,318           # Package would be ignored #
2024-03-27T10:34:07,318           ############################
2024-03-27T10:34:07,318           Python recognizes 'moleculekit.atomselect_utils' as an importable package[^1],
2024-03-27T10:34:07,318           but it is absent from setuptools' `packages` configuration.

2024-03-27T10:34:07,318           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-27T10:34:07,318           package, please make sure that 'moleculekit.atomselect_utils' is explicitly added
2024-03-27T10:34:07,318           to the `packages` configuration field.

2024-03-27T10:34:07,319           Alternatively, you can also rely on setuptools' discovery methods
2024-03-27T10:34:07,319           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-27T10:34:07,319           instead of `find_packages(...)`/`find:`).

2024-03-27T10:34:07,319           You can read more about "package discovery" on setuptools documentation page:

2024-03-27T10:34:07,319           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-27T10:34:07,319           If you don't want 'moleculekit.atomselect_utils' to be distributed and are
2024-03-27T10:34:07,320           already explicitly excluding 'moleculekit.atomselect_utils' via
2024-03-27T10:34:07,320           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-27T10:34:07,320           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-27T10:34:07,320           combination with a more fine grained `package-data` configuration.

2024-03-27T10:34:07,320           You can read more about "package data files" on setuptools documentation page:

2024-03-27T10:34:07,320           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-27T10:34:07,321           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-27T10:34:07,321                 even if it does not contain any `.py` files.
2024-03-27T10:34:07,321                 On the other hand, currently there is no concept of package data
2024-03-27T10:34:07,321                 directory, all directories are treated like packages.
2024-03-27T10:34:07,321           ********************************************************************************

2024-03-27T10:34:07,322   !!
2024-03-27T10:34:07,322     check.warn(importable)
2024-03-27T10:34:07,322   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.bondguesser_utils' is absent from the `packages` configuration.
2024-03-27T10:34:07,322   !!

2024-03-27T10:34:07,322           ********************************************************************************
2024-03-27T10:34:07,322           ############################
2024-03-27T10:34:07,322           # Package would be ignored #
2024-03-27T10:34:07,323           ############################
2024-03-27T10:34:07,323           Python recognizes 'moleculekit.bondguesser_utils' as an importable package[^1],
2024-03-27T10:34:07,323           but it is absent from setuptools' `packages` configuration.

2024-03-27T10:34:07,323           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-27T10:34:07,323           package, please make sure that 'moleculekit.bondguesser_utils' is explicitly added
2024-03-27T10:34:07,323           to the `packages` configuration field.

2024-03-27T10:34:07,323           Alternatively, you can also rely on setuptools' discovery methods
2024-03-27T10:34:07,324           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-27T10:34:07,324           instead of `find_packages(...)`/`find:`).

2024-03-27T10:34:07,324           You can read more about "package discovery" on setuptools documentation page:

2024-03-27T10:34:07,324           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-27T10:34:07,324           If you don't want 'moleculekit.bondguesser_utils' to be distributed and are
2024-03-27T10:34:07,325           already explicitly excluding 'moleculekit.bondguesser_utils' via
2024-03-27T10:34:07,325           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-27T10:34:07,325           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-27T10:34:07,325           combination with a more fine grained `package-data` configuration.

2024-03-27T10:34:07,325           You can read more about "package data files" on setuptools documentation page:

2024-03-27T10:34:07,325           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-27T10:34:07,326           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-27T10:34:07,326                 even if it does not contain any `.py` files.
2024-03-27T10:34:07,326                 On the other hand, currently there is no concept of package data
2024-03-27T10:34:07,326                 directory, all directories are treated like packages.
2024-03-27T10:34:07,326           ********************************************************************************

2024-03-27T10:34:07,326   !!
2024-03-27T10:34:07,326     check.warn(importable)
2024-03-27T10:34:07,327   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.cython_utils' is absent from the `packages` configuration.
2024-03-27T10:34:07,327   !!

2024-03-27T10:34:07,327           ********************************************************************************
2024-03-27T10:34:07,327           ############################
2024-03-27T10:34:07,327           # Package would be ignored #
2024-03-27T10:34:07,327           ############################
2024-03-27T10:34:07,327           Python recognizes 'moleculekit.cython_utils' as an importable package[^1],
2024-03-27T10:34:07,327           but it is absent from setuptools' `packages` configuration.

2024-03-27T10:34:07,328           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-27T10:34:07,328           package, please make sure that 'moleculekit.cython_utils' is explicitly added
2024-03-27T10:34:07,328           to the `packages` configuration field.

2024-03-27T10:34:07,328           Alternatively, you can also rely on setuptools' discovery methods
2024-03-27T10:34:07,328           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-27T10:34:07,328           instead of `find_packages(...)`/`find:`).

2024-03-27T10:34:07,329           You can read more about "package discovery" on setuptools documentation page:

2024-03-27T10:34:07,329           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-27T10:34:07,329           If you don't want 'moleculekit.cython_utils' to be distributed and are
2024-03-27T10:34:07,329           already explicitly excluding 'moleculekit.cython_utils' via
2024-03-27T10:34:07,329           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-27T10:34:07,329           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-27T10:34:07,329           combination with a more fine grained `package-data` configuration.

2024-03-27T10:34:07,330           You can read more about "package data files" on setuptools documentation page:

2024-03-27T10:34:07,330           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-27T10:34:07,330           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-27T10:34:07,330                 even if it does not contain any `.py` files.
2024-03-27T10:34:07,330                 On the other hand, currently there is no concept of package data
2024-03-27T10:34:07,330                 directory, all directories are treated like packages.
2024-03-27T10:34:07,331           ********************************************************************************

2024-03-27T10:34:07,331   !!
2024-03-27T10:34:07,331     check.warn(importable)
2024-03-27T10:34:07,331   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.distance_utils' is absent from the `packages` configuration.
2024-03-27T10:34:07,331   !!

2024-03-27T10:34:07,331           ********************************************************************************
2024-03-27T10:34:07,331           ############################
2024-03-27T10:34:07,332           # Package would be ignored #
2024-03-27T10:34:07,332           ############################
2024-03-27T10:34:07,332           Python recognizes 'moleculekit.distance_utils' as an importable package[^1],
2024-03-27T10:34:07,332           but it is absent from setuptools' `packages` configuration.

2024-03-27T10:34:07,332           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-27T10:34:07,332           package, please make sure that 'moleculekit.distance_utils' is explicitly added
2024-03-27T10:34:07,332           to the `packages` configuration field.

2024-03-27T10:34:07,332           Alternatively, you can also rely on setuptools' discovery methods
2024-03-27T10:34:07,333           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-27T10:34:07,333           instead of `find_packages(...)`/`find:`).

2024-03-27T10:34:07,333           You can read more about "package discovery" on setuptools documentation page:

2024-03-27T10:34:07,333           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-27T10:34:07,333           If you don't want 'moleculekit.distance_utils' to be distributed and are
2024-03-27T10:34:07,333           already explicitly excluding 'moleculekit.distance_utils' via
2024-03-27T10:34:07,333           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-27T10:34:07,334           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-27T10:34:07,334           combination with a more fine grained `package-data` configuration.

2024-03-27T10:34:07,334           You can read more about "package data files" on setuptools documentation page:

2024-03-27T10:34:07,334           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-27T10:34:07,334           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-27T10:34:07,334                 even if it does not contain any `.py` files.
2024-03-27T10:34:07,335                 On the other hand, currently there is no concept of package data
2024-03-27T10:34:07,335                 directory, all directories are treated like packages.
2024-03-27T10:34:07,335           ********************************************************************************

2024-03-27T10:34:07,335   !!
2024-03-27T10:34:07,335     check.warn(importable)
2024-03-27T10:34:07,335   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.fileformats.binpos' is absent from the `packages` configuration.
2024-03-27T10:34:07,335   !!

2024-03-27T10:34:07,336           ********************************************************************************
2024-03-27T10:34:07,336           ############################
2024-03-27T10:34:07,336           # Package would be ignored #
2024-03-27T10:34:07,336           ############################
2024-03-27T10:34:07,336           Python recognizes 'moleculekit.fileformats.binpos' as an importable package[^1],
2024-03-27T10:34:07,336           but it is absent from setuptools' `packages` configuration.

2024-03-27T10:34:07,336           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-27T10:34:07,336           package, please make sure that 'moleculekit.fileformats.binpos' is explicitly added
2024-03-27T10:34:07,336           to the `packages` configuration field.

2024-03-27T10:34:07,337           Alternatively, you can also rely on setuptools' discovery methods
2024-03-27T10:34:07,337           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-27T10:34:07,337           instead of `find_packages(...)`/`find:`).

2024-03-27T10:34:07,337           You can read more about "package discovery" on setuptools documentation page:

2024-03-27T10:34:07,337           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-27T10:34:07,337           If you don't want 'moleculekit.fileformats.binpos' to be distributed and are
2024-03-27T10:34:07,338           already explicitly excluding 'moleculekit.fileformats.binpos' via
2024-03-27T10:34:07,338           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-27T10:34:07,338           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-27T10:34:07,338           combination with a more fine grained `package-data` configuration.

2024-03-27T10:34:07,338           You can read more about "package data files" on setuptools documentation page:

2024-03-27T10:34:07,338           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-27T10:34:07,339           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-27T10:34:07,339                 even if it does not contain any `.py` files.
2024-03-27T10:34:07,339                 On the other hand, currently there is no concept of package data
2024-03-27T10:34:07,339                 directory, all directories are treated like packages.
2024-03-27T10:34:07,339           ********************************************************************************

2024-03-27T10:34:07,339   !!
2024-03-27T10:34:07,339     check.warn(importable)
2024-03-27T10:34:07,340   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.fileformats.binpos.include' is absent from the `packages` configuration.
2024-03-27T10:34:07,340   !!

2024-03-27T10:34:07,340           ********************************************************************************
2024-03-27T10:34:07,340           ############################
2024-03-27T10:34:07,340           # Package would be ignored #
2024-03-27T10:34:07,340           ############################
2024-03-27T10:34:07,340           Python recognizes 'moleculekit.fileformats.binpos.include' as an importable package[^1],
2024-03-27T10:34:07,341           but it is absent from setuptools' `packages` configuration.

2024-03-27T10:34:07,341           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-27T10:34:07,341           package, please make sure that 'moleculekit.fileformats.binpos.include' is explicitly added
2024-03-27T10:34:07,341           to the `packages` configuration field.

2024-03-27T10:34:07,341           Alternatively, you can also rely on setuptools' discovery methods
2024-03-27T10:34:07,341           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-27T10:34:07,341           instead of `find_packages(...)`/`find:`).

2024-03-27T10:34:07,342           You can read more about "package discovery" on setuptools documentation page:

2024-03-27T10:34:07,342           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-27T10:34:07,342           If you don't want 'moleculekit.fileformats.binpos.include' to be distributed and are
2024-03-27T10:34:07,342           already explicitly excluding 'moleculekit.fileformats.binpos.include' via
2024-03-27T10:34:07,342           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-27T10:34:07,342           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-27T10:34:07,343           combination with a more fine grained `package-data` configuration.

2024-03-27T10:34:07,343           You can read more about "package data files" on setuptools documentation page:

2024-03-27T10:34:07,343           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-27T10:34:07,343           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-27T10:34:07,343                 even if it does not contain any `.py` files.
2024-03-27T10:34:07,344                 On the other hand, currently there is no concept of package data
2024-03-27T10:34:07,344                 directory, all directories are treated like packages.
2024-03-27T10:34:07,344           ********************************************************************************

2024-03-27T10:34:07,344   !!
2024-03-27T10:34:07,344     check.warn(importable)
2024-03-27T10:34:07,344   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.fileformats.binpos.src' is absent from the `packages` configuration.
2024-03-27T10:34:07,344   !!

2024-03-27T10:34:07,345           ********************************************************************************
2024-03-27T10:34:07,345           ############################
2024-03-27T10:34:07,345           # Package would be ignored #
2024-03-27T10:34:07,345           ############################
2024-03-27T10:34:07,345           Python recognizes 'moleculekit.fileformats.binpos.src' as an importable package[^1],
2024-03-27T10:34:07,345           but it is absent from setuptools' `packages` configuration.

2024-03-27T10:34:07,345           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-27T10:34:07,345           package, please make sure that 'moleculekit.fileformats.binpos.src' is explicitly added
2024-03-27T10:34:07,345           to the `packages` configuration field.

2024-03-27T10:34:07,346           Alternatively, you can also rely on setuptools' discovery methods
2024-03-27T10:34:07,346           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-27T10:34:07,346           instead of `find_packages(...)`/`find:`).

2024-03-27T10:34:07,346           You can read more about "package discovery" on setuptools documentation page:

2024-03-27T10:34:07,346           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-27T10:34:07,347           If you don't want 'moleculekit.fileformats.binpos.src' to be distributed and are
2024-03-27T10:34:07,347           already explicitly excluding 'moleculekit.fileformats.binpos.src' via
2024-03-27T10:34:07,347           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-27T10:34:07,347           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-27T10:34:07,347           combination with a more fine grained `package-data` configuration.

2024-03-27T10:34:07,347           You can read more about "package data files" on setuptools documentation page:

2024-03-27T10:34:07,347           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-27T10:34:07,348           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-27T10:34:07,348                 even if it does not contain any `.py` files.
2024-03-27T10:34:07,348                 On the other hand, currently there is no concept of package data
2024-03-27T10:34:07,348                 directory, all directories are treated like packages.
2024-03-27T10:34:07,348           ********************************************************************************

2024-03-27T10:34:07,348   !!
2024-03-27T10:34:07,349     check.warn(importable)
2024-03-27T10:34:07,349   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.fileformats.dcd' is absent from the `packages` configuration.
2024-03-27T10:34:07,349   !!

2024-03-27T10:34:07,349           ********************************************************************************
2024-03-27T10:34:07,349           ############################
2024-03-27T10:34:07,349           # Package would be ignored #
2024-03-27T10:34:07,349           ############################
2024-03-27T10:34:07,349           Python recognizes 'moleculekit.fileformats.dcd' as an importable package[^1],
2024-03-27T10:34:07,350           but it is absent from setuptools' `packages` configuration.

2024-03-27T10:34:07,350           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-27T10:34:07,350           package, please make sure that 'moleculekit.fileformats.dcd' is explicitly added
2024-03-27T10:34:07,350           to the `packages` configuration field.

2024-03-27T10:34:07,350           Alternatively, you can also rely on setuptools' discovery methods
2024-03-27T10:34:07,350           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-27T10:34:07,350           instead of `find_packages(...)`/`find:`).

2024-03-27T10:34:07,351           You can read more about "package discovery" on setuptools documentation page:

2024-03-27T10:34:07,351           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-27T10:34:07,351           If you don't want 'moleculekit.fileformats.dcd' to be distributed and are
2024-03-27T10:34:07,351           already explicitly excluding 'moleculekit.fileformats.dcd' via
2024-03-27T10:34:07,351           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-27T10:34:07,351           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-27T10:34:07,352           combination with a more fine grained `package-data` configuration.

2024-03-27T10:34:07,352           You can read more about "package data files" on setuptools documentation page:

2024-03-27T10:34:07,352           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-27T10:34:07,352           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-27T10:34:07,352                 even if it does not contain any `.py` files.
2024-03-27T10:34:07,353                 On the other hand, currently there is no concept of package data
2024-03-27T10:34:07,353                 directory, all directories are treated like packages.
2024-03-27T10:34:07,353           ********************************************************************************

2024-03-27T10:34:07,353   !!
2024-03-27T10:34:07,353     check.warn(importable)
2024-03-27T10:34:07,353   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.fileformats.dcd.include' is absent from the `packages` configuration.
2024-03-27T10:34:07,353   !!

2024-03-27T10:34:07,354           ********************************************************************************
2024-03-27T10:34:07,354           ############################
2024-03-27T10:34:07,354           # Package would be ignored #
2024-03-27T10:34:07,354           ############################
2024-03-27T10:34:07,354           Python recognizes 'moleculekit.fileformats.dcd.include' as an importable package[^1],
2024-03-27T10:34:07,354           but it is absent from setuptools' `packages` configuration.

2024-03-27T10:34:07,354           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-27T10:34:07,354           package, please make sure that 'moleculekit.fileformats.dcd.include' is explicitly added
2024-03-27T10:34:07,355           to the `packages` configuration field.

2024-03-27T10:34:07,355           Alternatively, you can also rely on setuptools' discovery methods
2024-03-27T10:34:07,355           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-27T10:34:07,355           instead of `find_packages(...)`/`find:`).

2024-03-27T10:34:07,355           You can read more about "package discovery" on setuptools documentation page:

2024-03-27T10:34:07,355           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-27T10:34:07,356           If you don't want 'moleculekit.fileformats.dcd.include' to be distributed and are
2024-03-27T10:34:07,356           already explicitly excluding 'moleculekit.fileformats.dcd.include' via
2024-03-27T10:34:07,356           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-27T10:34:07,356           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-27T10:34:07,356           combination with a more fine grained `package-data` configuration.

2024-03-27T10:34:07,356           You can read more about "package data files" on setuptools documentation page:

2024-03-27T10:34:07,357           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-27T10:34:07,357           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-27T10:34:07,357                 even if it does not contain any `.py` files.
2024-03-27T10:34:07,357                 On the other hand, currently there is no concept of package data
2024-03-27T10:34:07,357                 directory, all directories are treated like packages.
2024-03-27T10:34:07,358           ********************************************************************************

2024-03-27T10:34:07,358   !!
2024-03-27T10:34:07,358     check.warn(importable)
2024-03-27T10:34:07,358   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.fileformats.dcd.src' is absent from the `packages` configuration.
2024-03-27T10:34:07,358   !!

2024-03-27T10:34:07,358           ********************************************************************************
2024-03-27T10:34:07,358           ############################
2024-03-27T10:34:07,359           # Package would be ignored #
2024-03-27T10:34:07,359           ############################
2024-03-27T10:34:07,359           Python recognizes 'moleculekit.fileformats.dcd.src' as an importable package[^1],
2024-03-27T10:34:07,359           but it is absent from setuptools' `packages` configuration.

2024-03-27T10:34:07,359           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-27T10:34:07,359           package, please make sure that 'moleculekit.fileformats.dcd.src' is explicitly added
2024-03-27T10:34:07,359           to the `packages` configuration field.

2024-03-27T10:34:07,360           Alternatively, you can also rely on setuptools' discovery methods
2024-03-27T10:34:07,360           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-27T10:34:07,360           instead of `find_packages(...)`/`find:`).

2024-03-27T10:34:07,360           You can read more about "package discovery" on setuptools documentation page:

2024-03-27T10:34:07,360           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-27T10:34:07,360           If you don't want 'moleculekit.fileformats.dcd.src' to be distributed and are
2024-03-27T10:34:07,361           already explicitly excluding 'moleculekit.fileformats.dcd.src' via
2024-03-27T10:34:07,361           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-27T10:34:07,361           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-27T10:34:07,361           combination with a more fine grained `package-data` configuration.

2024-03-27T10:34:07,361           You can read more about "package data files" on setuptools documentation page:

2024-03-27T10:34:07,361           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-27T10:34:07,362           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-27T10:34:07,362                 even if it does not contain any `.py` files.
2024-03-27T10:34:07,362                 On the other hand, currently there is no concept of package data
2024-03-27T10:34:07,362                 directory, all directories are treated like packages.
2024-03-27T10:34:07,362           ********************************************************************************

2024-03-27T10:34:07,362   !!
2024-03-27T10:34:07,362     check.warn(importable)
2024-03-27T10:34:07,363   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.fileformats.xtc' is absent from the `packages` configuration.
2024-03-27T10:34:07,363   !!

2024-03-27T10:34:07,363           ********************************************************************************
2024-03-27T10:34:07,363           ############################
2024-03-27T10:34:07,363           # Package would be ignored #
2024-03-27T10:34:07,363           ############################
2024-03-27T10:34:07,363           Python recognizes 'moleculekit.fileformats.xtc' as an importable package[^1],
2024-03-27T10:34:07,363           but it is absent from setuptools' `packages` configuration.

2024-03-27T10:34:07,364           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-27T10:34:07,364           package, please make sure that 'moleculekit.fileformats.xtc' is explicitly added
2024-03-27T10:34:07,364           to the `packages` configuration field.

2024-03-27T10:34:07,364           Alternatively, you can also rely on setuptools' discovery methods
2024-03-27T10:34:07,364           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-27T10:34:07,364           instead of `find_packages(...)`/`find:`).

2024-03-27T10:34:07,364           You can read more about "package discovery" on setuptools documentation page:

2024-03-27T10:34:07,365           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-27T10:34:07,365           If you don't want 'moleculekit.fileformats.xtc' to be distributed and are
2024-03-27T10:34:07,365           already explicitly excluding 'moleculekit.fileformats.xtc' via
2024-03-27T10:34:07,365           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-27T10:34:07,365           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-27T10:34:07,365           combination with a more fine grained `package-data` configuration.

2024-03-27T10:34:07,366           You can read more about "package data files" on setuptools documentation page:

2024-03-27T10:34:07,366           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-27T10:34:07,366           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-27T10:34:07,366                 even if it does not contain any `.py` files.
2024-03-27T10:34:07,366                 On the other hand, currently there is no concept of package data
2024-03-27T10:34:07,366                 directory, all directories are treated like packages.
2024-03-27T10:34:07,367           ********************************************************************************

2024-03-27T10:34:07,367   !!
2024-03-27T10:34:07,367     check.warn(importable)
2024-03-27T10:34:07,367   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.fileformats.xtc.include' is absent from the `packages` configuration.
2024-03-27T10:34:07,367   !!

2024-03-27T10:34:07,367           ********************************************************************************
2024-03-27T10:34:07,367           ############################
2024-03-27T10:34:07,367           # Package would be ignored #
2024-03-27T10:34:07,368           ############################
2024-03-27T10:34:07,368           Python recognizes 'moleculekit.fileformats.xtc.include' as an importable package[^1],
2024-03-27T10:34:07,368           but it is absent from setuptools' `packages` configuration.

2024-03-27T10:34:07,368           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-27T10:34:07,368           package, please make sure that 'moleculekit.fileformats.xtc.include' is explicitly added
2024-03-27T10:34:07,368           to the `packages` configuration field.

2024-03-27T10:34:07,368           Alternatively, you can also rely on setuptools' discovery methods
2024-03-27T10:34:07,369           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-27T10:34:07,369           instead of `find_packages(...)`/`find:`).

2024-03-27T10:34:07,369           You can read more about "package discovery" on setuptools documentation page:

2024-03-27T10:34:07,369           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-27T10:34:07,369           If you don't want 'moleculekit.fileformats.xtc.include' to be distributed and are
2024-03-27T10:34:07,369           already explicitly excluding 'moleculekit.fileformats.xtc.include' via
2024-03-27T10:34:07,370           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-27T10:34:07,370           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-27T10:34:07,370           combination with a more fine grained `package-data` configuration.

2024-03-27T10:34:07,370           You can read more about "package data files" on setuptools documentation page:

2024-03-27T10:34:07,370           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-27T10:34:07,370           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-27T10:34:07,371                 even if it does not contain any `.py` files.
2024-03-27T10:34:07,371                 On the other hand, currently there is no concept of package data
2024-03-27T10:34:07,371                 directory, all directories are treated like packages.
2024-03-27T10:34:07,371           ********************************************************************************

2024-03-27T10:34:07,371   !!
2024-03-27T10:34:07,371     check.warn(importable)
2024-03-27T10:34:07,371   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.fileformats.xtc.src' is absent from the `packages` configuration.
2024-03-27T10:34:07,371   !!

2024-03-27T10:34:07,372           ********************************************************************************
2024-03-27T10:34:07,372           ############################
2024-03-27T10:34:07,372           # Package would be ignored #
2024-03-27T10:34:07,372           ############################
2024-03-27T10:34:07,372           Python recognizes 'moleculekit.fileformats.xtc.src' as an importable package[^1],
2024-03-27T10:34:07,372           but it is absent from setuptools' `packages` configuration.

2024-03-27T10:34:07,373           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-27T10:34:07,373           package, please make sure that 'moleculekit.fileformats.xtc.src' is explicitly added
2024-03-27T10:34:07,373           to the `packages` configuration field.

2024-03-27T10:34:07,373           Alternatively, you can also rely on setuptools' discovery methods
2024-03-27T10:34:07,373           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-27T10:34:07,373           instead of `find_packages(...)`/`find:`).

2024-03-27T10:34:07,373           You can read more about "package discovery" on setuptools documentation page:

2024-03-27T10:34:07,374           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-27T10:34:07,374           If you don't want 'moleculekit.fileformats.xtc.src' to be distributed and are
2024-03-27T10:34:07,374           already explicitly excluding 'moleculekit.fileformats.xtc.src' via
2024-03-27T10:34:07,374           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-27T10:34:07,374           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-27T10:34:07,375           combination with a more fine grained `package-data` configuration.

2024-03-27T10:34:07,375           You can read more about "package data files" on setuptools documentation page:

2024-03-27T10:34:07,375           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-27T10:34:07,375           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-27T10:34:07,375                 even if it does not contain any `.py` files.
2024-03-27T10:34:07,375                 On the other hand, currently there is no concept of package data
2024-03-27T10:34:07,376                 directory, all directories are treated like packages.
2024-03-27T10:34:07,376           ********************************************************************************

2024-03-27T10:34:07,376   !!
2024-03-27T10:34:07,376     check.warn(importable)
2024-03-27T10:34:07,376   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.interactions.cationpi' is absent from the `packages` configuration.
2024-03-27T10:34:07,376   !!

2024-03-27T10:34:07,376           ********************************************************************************
2024-03-27T10:34:07,377           ############################
2024-03-27T10:34:07,377           # Package would be ignored #
2024-03-27T10:34:07,377           ############################
2024-03-27T10:34:07,377           Python recognizes 'moleculekit.interactions.cationpi' as an importable package[^1],
2024-03-27T10:34:07,377           but it is absent from setuptools' `packages` configuration.

2024-03-27T10:34:07,377           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-27T10:34:07,377           package, please make sure that 'moleculekit.interactions.cationpi' is explicitly added
2024-03-27T10:34:07,378           to the `packages` configuration field.

2024-03-27T10:34:07,378           Alternatively, you can also rely on setuptools' discovery methods
2024-03-27T10:34:07,378           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-27T10:34:07,378           instead of `find_packages(...)`/`find:`).

2024-03-27T10:34:07,378           You can read more about "package discovery" on setuptools documentation page:

2024-03-27T10:34:07,379           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-27T10:34:07,379           If you don't want 'moleculekit.interactions.cationpi' to be distributed and are
2024-03-27T10:34:07,379           already explicitly excluding 'moleculekit.interactions.cationpi' via
2024-03-27T10:34:07,379           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-27T10:34:07,379           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-27T10:34:07,379           combination with a more fine grained `package-data` configuration.

2024-03-27T10:34:07,380           You can read more about "package data files" on setuptools documentation page:

2024-03-27T10:34:07,380           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-27T10:34:07,380           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-27T10:34:07,380                 even if it does not contain any `.py` files.
2024-03-27T10:34:07,381                 On the other hand, currently there is no concept of package data
2024-03-27T10:34:07,381                 directory, all directories are treated like packages.
2024-03-27T10:34:07,381           ********************************************************************************

2024-03-27T10:34:07,381   !!
2024-03-27T10:34:07,381     check.warn(importable)
2024-03-27T10:34:07,381   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.interactions.hbonds' is absent from the `packages` configuration.
2024-03-27T10:34:07,381   !!

2024-03-27T10:34:07,382           ********************************************************************************
2024-03-27T10:34:07,382           ############################
2024-03-27T10:34:07,382           # Package would be ignored #
2024-03-27T10:34:07,382           ############################
2024-03-27T10:34:07,382           Python recognizes 'moleculekit.interactions.hbonds' as an importable package[^1],
2024-03-27T10:34:07,382           but it is absent from setuptools' `packages` configuration.

2024-03-27T10:34:07,383           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-27T10:34:07,383           package, please make sure that 'moleculekit.interactions.hbonds' is explicitly added
2024-03-27T10:34:07,383           to the `packages` configuration field.

2024-03-27T10:34:07,383           Alternatively, you can also rely on setuptools' discovery methods
2024-03-27T10:34:07,383           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-27T10:34:07,383           instead of `find_packages(...)`/`find:`).

2024-03-27T10:34:07,384           You can read more about "package discovery" on setuptools documentation page:

2024-03-27T10:34:07,384           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-27T10:34:07,384           If you don't want 'moleculekit.interactions.hbonds' to be distributed and are
2024-03-27T10:34:07,384           already explicitly excluding 'moleculekit.interactions.hbonds' via
2024-03-27T10:34:07,384           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-27T10:34:07,385           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-27T10:34:07,385           combination with a more fine grained `package-data` configuration.

2024-03-27T10:34:07,385           You can read more about "package data files" on setuptools documentation page:

2024-03-27T10:34:07,385           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-27T10:34:07,386           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-27T10:34:07,386                 even if it does not contain any `.py` files.
2024-03-27T10:34:07,386                 On the other hand, currently there is no concept of package data
2024-03-27T10:34:07,386                 directory, all directories are treated like packages.
2024-03-27T10:34:07,386           ********************************************************************************

2024-03-27T10:34:07,386   !!
2024-03-27T10:34:07,386     check.warn(importable)
2024-03-27T10:34:07,387   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.interactions.pipi' is absent from the `packages` configuration.
2024-03-27T10:34:07,387   !!

2024-03-27T10:34:07,387           ********************************************************************************
2024-03-27T10:34:07,387           ############################
2024-03-27T10:34:07,387           # Package would be ignored #
2024-03-27T10:34:07,387           ############################
2024-03-27T10:34:07,387           Python recognizes 'moleculekit.interactions.pipi' as an importable package[^1],
2024-03-27T10:34:07,388           but it is absent from setuptools' `packages` configuration.

2024-03-27T10:34:07,388           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-27T10:34:07,388           package, please make sure that 'moleculekit.interactions.pipi' is explicitly added
2024-03-27T10:34:07,388           to the `packages` configuration field.

2024-03-27T10:34:07,388           Alternatively, you can also rely on setuptools' discovery methods
2024-03-27T10:34:07,388           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-27T10:34:07,389           instead of `find_packages(...)`/`find:`).

2024-03-27T10:34:07,389           You can read more about "package discovery" on setuptools documentation page:

2024-03-27T10:34:07,389           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-27T10:34:07,389           If you don't want 'moleculekit.interactions.pipi' to be distributed and are
2024-03-27T10:34:07,389           already explicitly excluding 'moleculekit.interactions.pipi' via
2024-03-27T10:34:07,389           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-27T10:34:07,390           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-27T10:34:07,390           combination with a more fine grained `package-data` configuration.

2024-03-27T10:34:07,390           You can read more about "package data files" on setuptools documentation page:

2024-03-27T10:34:07,390           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-27T10:34:07,391           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-27T10:34:07,391                 even if it does not contain any `.py` files.
2024-03-27T10:34:07,391                 On the other hand, currently there is no concept of package data
2024-03-27T10:34:07,391                 directory, all directories are treated like packages.
2024-03-27T10:34:07,391           ********************************************************************************

2024-03-27T10:34:07,391   !!
2024-03-27T10:34:07,391     check.warn(importable)
2024-03-27T10:34:07,391   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.interactions.sigmahole' is absent from the `packages` configuration.
2024-03-27T10:34:07,392   !!

2024-03-27T10:34:07,392           ********************************************************************************
2024-03-27T10:34:07,392           ############################
2024-03-27T10:34:07,392           # Package would be ignored #
2024-03-27T10:34:07,392           ############################
2024-03-27T10:34:07,392           Python recognizes 'moleculekit.interactions.sigmahole' as an importable package[^1],
2024-03-27T10:34:07,392           but it is absent from setuptools' `packages` configuration.

2024-03-27T10:34:07,393           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-27T10:34:07,393           package, please make sure that 'moleculekit.interactions.sigmahole' is explicitly added
2024-03-27T10:34:07,393           to the `packages` configuration field.

2024-03-27T10:34:07,393           Alternatively, you can also rely on setuptools' discovery methods
2024-03-27T10:34:07,393           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-27T10:34:07,394           instead of `find_packages(...)`/`find:`).

2024-03-27T10:34:07,394           You can read more about "package discovery" on setuptools documentation page:

2024-03-27T10:34:07,394           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-27T10:34:07,394           If you don't want 'moleculekit.interactions.sigmahole' to be distributed and are
2024-03-27T10:34:07,395           already explicitly excluding 'moleculekit.interactions.sigmahole' via
2024-03-27T10:34:07,395           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-27T10:34:07,395           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-27T10:34:07,395           combination with a more fine grained `package-data` configuration.

2024-03-27T10:34:07,395           You can read more about "package data files" on setuptools documentation page:

2024-03-27T10:34:07,396           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-27T10:34:07,396           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-27T10:34:07,396                 even if it does not contain any `.py` files.
2024-03-27T10:34:07,396                 On the other hand, currently there is no concept of package data
2024-03-27T10:34:07,396                 directory, all directories are treated like packages.
2024-03-27T10:34:07,397           ********************************************************************************

2024-03-27T10:34:07,397   !!
2024-03-27T10:34:07,397     check.warn(importable)
2024-03-27T10:34:07,397   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.occupancy_utils' is absent from the `packages` configuration.
2024-03-27T10:34:07,397   !!

2024-03-27T10:34:07,398           ********************************************************************************
2024-03-27T10:34:07,398           ############################
2024-03-27T10:34:07,398           # Package would be ignored #
2024-03-27T10:34:07,398           ############################
2024-03-27T10:34:07,398           Python recognizes 'moleculekit.occupancy_utils' as an importable package[^1],
2024-03-27T10:34:07,398           but it is absent from setuptools' `packages` configuration.

2024-03-27T10:34:07,399           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-27T10:34:07,399           package, please make sure that 'moleculekit.occupancy_utils' is explicitly added
2024-03-27T10:34:07,399           to the `packages` configuration field.

2024-03-27T10:34:07,399           Alternatively, you can also rely on setuptools' discovery methods
2024-03-27T10:34:07,399           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-27T10:34:07,399           instead of `find_packages(...)`/`find:`).

2024-03-27T10:34:07,400           You can read more about "package discovery" on setuptools documentation page:

2024-03-27T10:34:07,400           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-27T10:34:07,400           If you don't want 'moleculekit.occupancy_utils' to be distributed and are
2024-03-27T10:34:07,400           already explicitly excluding 'moleculekit.occupancy_utils' via
2024-03-27T10:34:07,400           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-27T10:34:07,401           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-27T10:34:07,401           combination with a more fine grained `package-data` configuration.

2024-03-27T10:34:07,401           You can read more about "package data files" on setuptools documentation page:

2024-03-27T10:34:07,401           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-27T10:34:07,402           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-27T10:34:07,402                 even if it does not contain any `.py` files.
2024-03-27T10:34:07,402                 On the other hand, currently there is no concept of package data
2024-03-27T10:34:07,402                 directory, all directories are treated like packages.
2024-03-27T10:34:07,402           ********************************************************************************

2024-03-27T10:34:07,403   !!
2024-03-27T10:34:07,403     check.warn(importable)
2024-03-27T10:34:07,403   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.share' is absent from the `packages` configuration.
2024-03-27T10:34:07,403   !!

2024-03-27T10:34:07,403           ********************************************************************************
2024-03-27T10:34:07,403           ############################
2024-03-27T10:34:07,404           # Package would be ignored #
2024-03-27T10:34:07,404           ############################
2024-03-27T10:34:07,404           Python recognizes 'moleculekit.share' as an importable package[^1],
2024-03-27T10:34:07,404           but it is absent from setuptools' `packages` configuration.

2024-03-27T10:34:07,404           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-27T10:34:07,404           package, please make sure that 'moleculekit.share' is explicitly added
2024-03-27T10:34:07,405           to the `packages` configuration field.

2024-03-27T10:34:07,405           Alternatively, you can also rely on setuptools' discovery methods
2024-03-27T10:34:07,405           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-27T10:34:07,405           instead of `find_packages(...)`/`find:`).

2024-03-27T10:34:07,405           You can read more about "package discovery" on setuptools documentation page:

2024-03-27T10:34:07,406           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-27T10:34:07,406           If you don't want 'moleculekit.share' to be distributed and are
2024-03-27T10:34:07,406           already explicitly excluding 'moleculekit.share' via
2024-03-27T10:34:07,406           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-27T10:34:07,406           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-27T10:34:07,406           combination with a more fine grained `package-data` configuration.

2024-03-27T10:34:07,407           You can read more about "package data files" on setuptools documentation page:

2024-03-27T10:34:07,407           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-27T10:34:07,407           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-27T10:34:07,408                 even if it does not contain any `.py` files.
2024-03-27T10:34:07,408                 On the other hand, currently there is no concept of package data
2024-03-27T10:34:07,408                 directory, all directories are treated like packages.
2024-03-27T10:34:07,408           ********************************************************************************

2024-03-27T10:34:07,408   !!
2024-03-27T10:34:07,408     check.warn(importable)
2024-03-27T10:34:07,408   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.share.atomselect' is absent from the `packages` configuration.
2024-03-27T10:34:07,409   !!

2024-03-27T10:34:07,409           ********************************************************************************
2024-03-27T10:34:07,409           ############################
2024-03-27T10:34:07,409           # Package would be ignored #
2024-03-27T10:34:07,409           ############################
2024-03-27T10:34:07,409           Python recognizes 'moleculekit.share.atomselect' as an importable package[^1],
2024-03-27T10:34:07,410           but it is absent from setuptools' `packages` configuration.

2024-03-27T10:34:07,410           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-27T10:34:07,410           package, please make sure that 'moleculekit.share.atomselect' is explicitly added
2024-03-27T10:34:07,410           to the `packages` configuration field.

2024-03-27T10:34:07,410           Alternatively, you can also rely on setuptools' discovery methods
2024-03-27T10:34:07,411           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-27T10:34:07,411           instead of `find_packages(...)`/`find:`).

2024-03-27T10:34:07,411           You can read more about "package discovery" on setuptools documentation page:

2024-03-27T10:34:07,411           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-27T10:34:07,412           If you don't want 'moleculekit.share.atomselect' to be distributed and are
2024-03-27T10:34:07,412           already explicitly excluding 'moleculekit.share.atomselect' via
2024-03-27T10:34:07,412           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-27T10:34:07,412           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-27T10:34:07,412           combination with a more fine grained `package-data` configuration.

2024-03-27T10:34:07,412           You can read more about "package data files" on setuptools documentation page:

2024-03-27T10:34:07,413           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-27T10:34:07,413           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-27T10:34:07,413                 even if it does not contain any `.py` files.
2024-03-27T10:34:07,413                 On the other hand, currently there is no concept of package data
2024-03-27T10:34:07,413                 directory, all directories are treated like packages.
2024-03-27T10:34:07,414           ********************************************************************************

2024-03-27T10:34:07,414   !!
2024-03-27T10:34:07,414     check.warn(importable)
2024-03-27T10:34:07,414   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.share.pdb2pqr.residues' is absent from the `packages` configuration.
2024-03-27T10:34:07,414   !!

2024-03-27T10:34:07,415           ********************************************************************************
2024-03-27T10:34:07,415           ############################
2024-03-27T10:34:07,415           # Package would be ignored #
2024-03-27T10:34:07,415           ############################
2024-03-27T10:34:07,415           Python recognizes 'moleculekit.share.pdb2pqr.residues' as an importable package[^1],
2024-03-27T10:34:07,415           but it is absent from setuptools' `packages` configuration.

2024-03-27T10:34:07,416           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-27T10:34:07,416           package, please make sure that 'moleculekit.share.pdb2pqr.residues' is explicitly added
2024-03-27T10:34:07,416           to the `packages` configuration field.

2024-03-27T10:34:07,416           Alternatively, you can also rely on setuptools' discovery methods
2024-03-27T10:34:07,416           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-27T10:34:07,416           instead of `find_packages(...)`/`find:`).

2024-03-27T10:34:07,417           You can read more about "package discovery" on setuptools documentation page:

2024-03-27T10:34:07,417           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-27T10:34:07,417           If you don't want 'moleculekit.share.pdb2pqr.residues' to be distributed and are
2024-03-27T10:34:07,417           already explicitly excluding 'moleculekit.share.pdb2pqr.residues' via
2024-03-27T10:34:07,417           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-27T10:34:07,418           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-27T10:34:07,418           combination with a more fine grained `package-data` configuration.

2024-03-27T10:34:07,418           You can read more about "package data files" on setuptools documentation page:

2024-03-27T10:34:07,418           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-27T10:34:07,419           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-27T10:34:07,419                 even if it does not contain any `.py` files.
2024-03-27T10:34:07,419                 On the other hand, currently there is no concept of package data
2024-03-27T10:34:07,419                 directory, all directories are treated like packages.
2024-03-27T10:34:07,419           ********************************************************************************

2024-03-27T10:34:07,419   !!
2024-03-27T10:34:07,419     check.warn(importable)
2024-03-27T10:34:07,420   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.tmalign' is absent from the `packages` configuration.
2024-03-27T10:34:07,420   !!

2024-03-27T10:34:07,420           ********************************************************************************
2024-03-27T10:34:07,420           ############################
2024-03-27T10:34:07,420           # Package would be ignored #
2024-03-27T10:34:07,420           ############################
2024-03-27T10:34:07,420           Python recognizes 'moleculekit.tmalign' as an importable package[^1],
2024-03-27T10:34:07,420           but it is absent from setuptools' `packages` configuration.

2024-03-27T10:34:07,421           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-27T10:34:07,421           package, please make sure that 'moleculekit.tmalign' is explicitly added
2024-03-27T10:34:07,421           to the `packages` configuration field.

2024-03-27T10:34:07,421           Alternatively, you can also rely on setuptools' discovery methods
2024-03-27T10:34:07,421           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-27T10:34:07,421           instead of `find_packages(...)`/`find:`).

2024-03-27T10:34:07,422           You can read more about "package discovery" on setuptools documentation page:

2024-03-27T10:34:07,422           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-27T10:34:07,422           If you don't want 'moleculekit.tmalign' to be distributed and are
2024-03-27T10:34:07,422           already explicitly excluding 'moleculekit.tmalign' via
2024-03-27T10:34:07,422           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-27T10:34:07,423           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-27T10:34:07,423           combination with a more fine grained `package-data` configuration.

2024-03-27T10:34:07,423           You can read more about "package data files" on setuptools documentation page:

2024-03-27T10:34:07,423           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-27T10:34:07,424           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-27T10:34:07,424                 even if it does not contain any `.py` files.
2024-03-27T10:34:07,424                 On the other hand, currently there is no concept of package data
2024-03-27T10:34:07,424                 directory, all directories are treated like packages.
2024-03-27T10:34:07,424           ********************************************************************************

2024-03-27T10:34:07,424   !!
2024-03-27T10:34:07,424     check.warn(importable)
2024-03-27T10:34:07,425   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.tmalign.include' is absent from the `packages` configuration.
2024-03-27T10:34:07,425   !!

2024-03-27T10:34:07,425           ********************************************************************************
2024-03-27T10:34:07,425           ############################
2024-03-27T10:34:07,425           # Package would be ignored #
2024-03-27T10:34:07,425           ############################
2024-03-27T10:34:07,426           Python recognizes 'moleculekit.tmalign.include' as an importable package[^1],
2024-03-27T10:34:07,426           but it is absent from setuptools' `packages` configuration.

2024-03-27T10:34:07,426           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-27T10:34:07,426           package, please make sure that 'moleculekit.tmalign.include' is explicitly added
2024-03-27T10:34:07,426           to the `packages` configuration field.

2024-03-27T10:34:07,426           Alternatively, you can also rely on setuptools' discovery methods
2024-03-27T10:34:07,427           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-27T10:34:07,427           instead of `find_packages(...)`/`find:`).

2024-03-27T10:34:07,427           You can read more about "package discovery" on setuptools documentation page:

2024-03-27T10:34:07,427           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-27T10:34:07,427           If you don't want 'moleculekit.tmalign.include' to be distributed and are
2024-03-27T10:34:07,427           already explicitly excluding 'moleculekit.tmalign.include' via
2024-03-27T10:34:07,428           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-27T10:34:07,428           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-27T10:34:07,428           combination with a more fine grained `package-data` configuration.

2024-03-27T10:34:07,428           You can read more about "package data files" on setuptools documentation page:

2024-03-27T10:34:07,428           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-27T10:34:07,429           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-27T10:34:07,429                 even if it does not contain any `.py` files.
2024-03-27T10:34:07,429                 On the other hand, currently there is no concept of package data
2024-03-27T10:34:07,429                 directory, all directories are treated like packages.
2024-03-27T10:34:07,429           ********************************************************************************

2024-03-27T10:34:07,429   !!
2024-03-27T10:34:07,429     check.warn(importable)
2024-03-27T10:34:07,430   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.tmalign.src' is absent from the `packages` configuration.
2024-03-27T10:34:07,430   !!

2024-03-27T10:34:07,430           ********************************************************************************
2024-03-27T10:34:07,430           ############################
2024-03-27T10:34:07,430           # Package would be ignored #
2024-03-27T10:34:07,430           ############################
2024-03-27T10:34:07,430           Python recognizes 'moleculekit.tmalign.src' as an importable package[^1],
2024-03-27T10:34:07,431           but it is absent from setuptools' `packages` configuration.

2024-03-27T10:34:07,431           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-27T10:34:07,431           package, please make sure that 'moleculekit.tmalign.src' is explicitly added
2024-03-27T10:34:07,431           to the `packages` configuration field.

2024-03-27T10:34:07,431           Alternatively, you can also rely on setuptools' discovery methods
2024-03-27T10:34:07,431           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-27T10:34:07,432           instead of `find_packages(...)`/`find:`).

2024-03-27T10:34:07,432           You can read more about "package discovery" on setuptools documentation page:

2024-03-27T10:34:07,432           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-27T10:34:07,432           If you don't want 'moleculekit.tmalign.src' to be distributed and are
2024-03-27T10:34:07,433           already explicitly excluding 'moleculekit.tmalign.src' via
2024-03-27T10:34:07,433           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-27T10:34:07,433           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-27T10:34:07,433           combination with a more fine grained `package-data` configuration.

2024-03-27T10:34:07,433           You can read more about "package data files" on setuptools documentation page:

2024-03-27T10:34:07,434           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-27T10:34:07,434           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-27T10:34:07,434                 even if it does not contain any `.py` files.
2024-03-27T10:34:07,434                 On the other hand, currently there is no concept of package data
2024-03-27T10:34:07,434                 directory, all directories are treated like packages.
2024-03-27T10:34:07,435           ********************************************************************************

2024-03-27T10:34:07,435   !!
2024-03-27T10:34:07,435     check.warn(importable)
2024-03-27T10:34:07,435   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.wrapping' is absent from the `packages` configuration.
2024-03-27T10:34:07,435   !!

2024-03-27T10:34:07,436           ********************************************************************************
2024-03-27T10:34:07,436           ############################
2024-03-27T10:34:07,436           # Package would be ignored #
2024-03-27T10:34:07,436           ############################
2024-03-27T10:34:07,436           Python recognizes 'moleculekit.wrapping' as an importable package[^1],
2024-03-27T10:34:07,436           but it is absent from setuptools' `packages` configuration.

2024-03-27T10:34:07,437           This leads to an ambiguous overall configuration. If you want to distribute this
2024-03-27T10:34:07,437           package, please make sure that 'moleculekit.wrapping' is explicitly added
2024-03-27T10:34:07,437           to the `packages` configuration field.

2024-03-27T10:34:07,437           Alternatively, you can also rely on setuptools' discovery methods
2024-03-27T10:34:07,437           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-03-27T10:34:07,438           instead of `find_packages(...)`/`find:`).

2024-03-27T10:34:07,438           You can read more about "package discovery" on setuptools documentation page:

2024-03-27T10:34:07,438           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-03-27T10:34:07,438           If you don't want 'moleculekit.wrapping' to be distributed and are
2024-03-27T10:34:07,439           already explicitly excluding 'moleculekit.wrapping' via
2024-03-27T10:34:07,439           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-03-27T10:34:07,439           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-03-27T10:34:07,439           combination with a more fine grained `package-data` configuration.

2024-03-27T10:34:07,439           You can read more about "package data files" on setuptools documentation page:

2024-03-27T10:34:07,439           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-03-27T10:34:07,440           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-03-27T10:34:07,440                 even if it does not contain any `.py` files.
2024-03-27T10:34:07,440                 On the other hand, currently there is no concept of package data
2024-03-27T10:34:07,440                 directory, all directories are treated like packages.
2024-03-27T10:34:07,440           ********************************************************************************

2024-03-27T10:34:07,441   !!
2024-03-27T10:34:07,441     check.warn(importable)
2024-03-27T10:34:07,441   copying moleculekit/logging.ini -> build/lib.linux-armv7l-cpython-39/moleculekit
2024-03-27T10:34:07,441   copying moleculekit/vmd_wrapper -> build/lib.linux-armv7l-cpython-39/moleculekit
2024-03-27T10:34:07,441   creating build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils
2024-03-27T10:34:07,441   copying moleculekit/atomselect_utils/atomselect_utils.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils
2024-03-27T10:34:07,442   copying moleculekit/atomselect_utils/atomselect_utils.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils
2024-03-27T10:34:07,442   creating build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils
2024-03-27T10:34:07,442   copying moleculekit/bondguesser_utils/bondguesser_utils.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils
2024-03-27T10:34:07,453   copying moleculekit/bondguesser_utils/bondguesser_utils.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils
2024-03-27T10:34:07,456   creating build/lib.linux-armv7l-cpython-39/moleculekit/cython_utils
2024-03-27T10:34:07,456   copying moleculekit/cython_utils/cython_utils.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/cython_utils
2024-03-27T10:34:07,476   copying moleculekit/cython_utils/cython_utils.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/cython_utils
2024-03-27T10:34:07,478   creating build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils
2024-03-27T10:34:07,479   copying moleculekit/distance_utils/distance_utils.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils
2024-03-27T10:34:07,503   copying moleculekit/distance_utils/distance_utils.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils
2024-03-27T10:34:07,505   creating build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils
2024-03-27T10:34:07,506   copying moleculekit/occupancy_utils/occupancy_utils.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils
2024-03-27T10:34:07,525   copying moleculekit/occupancy_utils/occupancy_utils.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils
2024-03-27T10:34:07,527   creating build/lib.linux-armv7l-cpython-39/moleculekit/share
2024-03-27T10:34:07,528   copying moleculekit/share/ALA.cif -> build/lib.linux-armv7l-cpython-39/moleculekit/share
2024-03-27T10:34:07,531   copying moleculekit/share/backbone.cif -> build/lib.linux-armv7l-cpython-39/moleculekit/share
2024-03-27T10:34:07,533   copying moleculekit/share/opm_sequences.json -> build/lib.linux-armv7l-cpython-39/moleculekit/share
2024-03-27T10:34:07,722   creating build/lib.linux-armv7l-cpython-39/moleculekit/share/atomselect
2024-03-27T10:34:07,723   copying moleculekit/share/atomselect/atomselect.json -> build/lib.linux-armv7l-cpython-39/moleculekit/share/atomselect
2024-03-27T10:34:07,725   creating build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr
2024-03-27T10:34:07,725   creating build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,727   copying moleculekit/share/pdb2pqr/residues/.gitkeep -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,728   copying moleculekit/share/pdb2pqr/residues/004.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,730   copying moleculekit/share/pdb2pqr/residues/004.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,732   copying moleculekit/share/pdb2pqr/residues/03Y.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,734   copying moleculekit/share/pdb2pqr/residues/03Y.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,736   copying moleculekit/share/pdb2pqr/residues/0A1.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,738   copying moleculekit/share/pdb2pqr/residues/0A1.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,740   copying moleculekit/share/pdb2pqr/residues/0AF.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,742   copying moleculekit/share/pdb2pqr/residues/0AF.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,744   copying moleculekit/share/pdb2pqr/residues/0BN.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,745   copying moleculekit/share/pdb2pqr/residues/0BN.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,747   copying moleculekit/share/pdb2pqr/residues/1MH.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,749   copying moleculekit/share/pdb2pqr/residues/1MH.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,752   copying moleculekit/share/pdb2pqr/residues/2AS.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,753   copying moleculekit/share/pdb2pqr/residues/2AS.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,755   copying moleculekit/share/pdb2pqr/residues/2GX.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,757   copying moleculekit/share/pdb2pqr/residues/2GX.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,761   copying moleculekit/share/pdb2pqr/residues/2ML.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,763   copying moleculekit/share/pdb2pqr/residues/2ML.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,765   copying moleculekit/share/pdb2pqr/residues/2MR.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,767   copying moleculekit/share/pdb2pqr/residues/2MR.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,769   copying moleculekit/share/pdb2pqr/residues/4IN.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,771   copying moleculekit/share/pdb2pqr/residues/4IN.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,773   copying moleculekit/share/pdb2pqr/residues/4PH.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,776   copying moleculekit/share/pdb2pqr/residues/4PH.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,778   copying moleculekit/share/pdb2pqr/residues/4PQ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,779   copying moleculekit/share/pdb2pqr/residues/4PQ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,781   copying moleculekit/share/pdb2pqr/residues/5JP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,783   copying moleculekit/share/pdb2pqr/residues/5JP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,785   copying moleculekit/share/pdb2pqr/residues/AA4.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,787   copying moleculekit/share/pdb2pqr/residues/AA4.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,789   copying moleculekit/share/pdb2pqr/residues/ABA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,791   copying moleculekit/share/pdb2pqr/residues/ABA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,793   copying moleculekit/share/pdb2pqr/residues/AHP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,795   copying moleculekit/share/pdb2pqr/residues/AHP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,797   copying moleculekit/share/pdb2pqr/residues/ALC.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,799   copying moleculekit/share/pdb2pqr/residues/ALC.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,801   copying moleculekit/share/pdb2pqr/residues/ALN.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,803   copying moleculekit/share/pdb2pqr/residues/ALN.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,805   copying moleculekit/share/pdb2pqr/residues/ALY.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,807   copying moleculekit/share/pdb2pqr/residues/ALY.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,809   copying moleculekit/share/pdb2pqr/residues/APD.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,811   copying moleculekit/share/pdb2pqr/residues/APD.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,813   copying moleculekit/share/pdb2pqr/residues/BB8.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,815   copying moleculekit/share/pdb2pqr/residues/BB8.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,817   copying moleculekit/share/pdb2pqr/residues/BCS.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,819   copying moleculekit/share/pdb2pqr/residues/BCS.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,821   copying moleculekit/share/pdb2pqr/residues/BTK.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,823   copying moleculekit/share/pdb2pqr/residues/BTK.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,825   copying moleculekit/share/pdb2pqr/residues/CCS.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,827   copying moleculekit/share/pdb2pqr/residues/CCS.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,829   copying moleculekit/share/pdb2pqr/residues/CGU.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,831   copying moleculekit/share/pdb2pqr/residues/CGU.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,833   copying moleculekit/share/pdb2pqr/residues/CSA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,835   copying moleculekit/share/pdb2pqr/residues/CSA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,837   copying moleculekit/share/pdb2pqr/residues/CSO.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,839   copying moleculekit/share/pdb2pqr/residues/CSO.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,841   copying moleculekit/share/pdb2pqr/residues/CSP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,843   copying moleculekit/share/pdb2pqr/residues/CSP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,845   copying moleculekit/share/pdb2pqr/residues/CSS.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,847   copying moleculekit/share/pdb2pqr/residues/CSS.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,848   copying moleculekit/share/pdb2pqr/residues/D4P.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,850   copying moleculekit/share/pdb2pqr/residues/D4P.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,853   copying moleculekit/share/pdb2pqr/residues/DA2.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,854   copying moleculekit/share/pdb2pqr/residues/DA2.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,857   copying moleculekit/share/pdb2pqr/residues/DAB.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,859   copying moleculekit/share/pdb2pqr/residues/DAB.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,860   copying moleculekit/share/pdb2pqr/residues/DAH.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,862   copying moleculekit/share/pdb2pqr/residues/DAH.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,864   copying moleculekit/share/pdb2pqr/residues/DPP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,866   copying moleculekit/share/pdb2pqr/residues/DPP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,868   copying moleculekit/share/pdb2pqr/residues/ESC.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,869   copying moleculekit/share/pdb2pqr/residues/ESC.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,871   copying moleculekit/share/pdb2pqr/residues/FGL.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,873   copying moleculekit/share/pdb2pqr/residues/FGL.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,875   copying moleculekit/share/pdb2pqr/residues/GHG.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,877   copying moleculekit/share/pdb2pqr/residues/GHG.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,879   copying moleculekit/share/pdb2pqr/residues/GME.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,881   copying moleculekit/share/pdb2pqr/residues/GME.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,883   copying moleculekit/share/pdb2pqr/residues/GNC.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,884   copying moleculekit/share/pdb2pqr/residues/GNC.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,886   copying moleculekit/share/pdb2pqr/residues/HHK.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,888   copying moleculekit/share/pdb2pqr/residues/HHK.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,891   copying moleculekit/share/pdb2pqr/residues/HLU.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,892   copying moleculekit/share/pdb2pqr/residues/HLU.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,895   copying moleculekit/share/pdb2pqr/residues/HLX.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,896   copying moleculekit/share/pdb2pqr/residues/HLX.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,898   copying moleculekit/share/pdb2pqr/residues/HOX.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,900   copying moleculekit/share/pdb2pqr/residues/HOX.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,902   copying moleculekit/share/pdb2pqr/residues/HPE.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,904   copying moleculekit/share/pdb2pqr/residues/HPE.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,906   copying moleculekit/share/pdb2pqr/residues/HQA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,908   copying moleculekit/share/pdb2pqr/residues/HQA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,909   copying moleculekit/share/pdb2pqr/residues/HTR.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,911   copying moleculekit/share/pdb2pqr/residues/HTR.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,913   copying moleculekit/share/pdb2pqr/residues/HYP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,915   copying moleculekit/share/pdb2pqr/residues/HYP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,917   copying moleculekit/share/pdb2pqr/residues/I2M.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,919   copying moleculekit/share/pdb2pqr/residues/I2M.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,921   copying moleculekit/share/pdb2pqr/residues/IGL.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,923   copying moleculekit/share/pdb2pqr/residues/IGL.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,925   copying moleculekit/share/pdb2pqr/residues/IIL.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,927   copying moleculekit/share/pdb2pqr/residues/IIL.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,929   copying moleculekit/share/pdb2pqr/residues/IML.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,931   copying moleculekit/share/pdb2pqr/residues/IML.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,933   copying moleculekit/share/pdb2pqr/residues/KYN.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,935   copying moleculekit/share/pdb2pqr/residues/KYN.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,937   copying moleculekit/share/pdb2pqr/residues/LME.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,939   copying moleculekit/share/pdb2pqr/residues/LME.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,941   copying moleculekit/share/pdb2pqr/residues/LMQ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,943   copying moleculekit/share/pdb2pqr/residues/LMQ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,945   copying moleculekit/share/pdb2pqr/residues/LYZ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,946   copying moleculekit/share/pdb2pqr/residues/LYZ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,948   copying moleculekit/share/pdb2pqr/residues/M3L.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,950   copying moleculekit/share/pdb2pqr/residues/M3L.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,953   copying moleculekit/share/pdb2pqr/residues/ME0.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,954   copying moleculekit/share/pdb2pqr/residues/ME0.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,956   copying moleculekit/share/pdb2pqr/residues/MEA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,958   copying moleculekit/share/pdb2pqr/residues/MEA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,960   copying moleculekit/share/pdb2pqr/residues/MEN.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,962   copying moleculekit/share/pdb2pqr/residues/MEN.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,964   copying moleculekit/share/pdb2pqr/residues/MEQ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,966   copying moleculekit/share/pdb2pqr/residues/MEQ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,968   copying moleculekit/share/pdb2pqr/residues/MLE.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,969   copying moleculekit/share/pdb2pqr/residues/MLE.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,972   copying moleculekit/share/pdb2pqr/residues/MLY.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,973   copying moleculekit/share/pdb2pqr/residues/MLY.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,976   copying moleculekit/share/pdb2pqr/residues/MLZ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,977   copying moleculekit/share/pdb2pqr/residues/MLZ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,980   copying moleculekit/share/pdb2pqr/residues/MME.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,982   copying moleculekit/share/pdb2pqr/residues/MME.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,984   copying moleculekit/share/pdb2pqr/residues/MMO.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,986   copying moleculekit/share/pdb2pqr/residues/MMO.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,988   copying moleculekit/share/pdb2pqr/residues/MVA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,989   copying moleculekit/share/pdb2pqr/residues/MVA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,992   copying moleculekit/share/pdb2pqr/residues/NAL.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,993   copying moleculekit/share/pdb2pqr/residues/NAL.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,996   copying moleculekit/share/pdb2pqr/residues/NCY.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:07,998   copying moleculekit/share/pdb2pqr/residues/NCY.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,000   copying moleculekit/share/pdb2pqr/residues/NLE.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,001   copying moleculekit/share/pdb2pqr/residues/NLE.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,003   copying moleculekit/share/pdb2pqr/residues/NVA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,005   copying moleculekit/share/pdb2pqr/residues/NVA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,007   copying moleculekit/share/pdb2pqr/residues/NZC.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,009   copying moleculekit/share/pdb2pqr/residues/NZC.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,011   copying moleculekit/share/pdb2pqr/residues/OCY.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,013   copying moleculekit/share/pdb2pqr/residues/OCY.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,014   copying moleculekit/share/pdb2pqr/residues/OMX.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,016   copying moleculekit/share/pdb2pqr/residues/OMX.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,018   copying moleculekit/share/pdb2pqr/residues/ONL.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,020   copying moleculekit/share/pdb2pqr/residues/ONL.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,022   copying moleculekit/share/pdb2pqr/residues/ORM.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,024   copying moleculekit/share/pdb2pqr/residues/ORM.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,026   copying moleculekit/share/pdb2pqr/residues/P1L.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,028   copying moleculekit/share/pdb2pqr/residues/P1L.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,030   copying moleculekit/share/pdb2pqr/residues/PCA.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,032   copying moleculekit/share/pdb2pqr/residues/PCA.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,033   copying moleculekit/share/pdb2pqr/residues/PRK.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,035   copying moleculekit/share/pdb2pqr/residues/PRK.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,037   copying moleculekit/share/pdb2pqr/residues/PTR.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,039   copying moleculekit/share/pdb2pqr/residues/PTR.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,041   copying moleculekit/share/pdb2pqr/residues/SEP.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,043   copying moleculekit/share/pdb2pqr/residues/SEP.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,045   copying moleculekit/share/pdb2pqr/residues/TPO.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,047   copying moleculekit/share/pdb2pqr/residues/TPO.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,049   copying moleculekit/share/pdb2pqr/residues/TRO.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,051   copying moleculekit/share/pdb2pqr/residues/TRO.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,053   copying moleculekit/share/pdb2pqr/residues/TY2.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,054   copying moleculekit/share/pdb2pqr/residues/TY2.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,056   copying moleculekit/share/pdb2pqr/residues/TYQ.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,058   copying moleculekit/share/pdb2pqr/residues/TYQ.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,060   copying moleculekit/share/pdb2pqr/residues/YCM.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,062   copying moleculekit/share/pdb2pqr/residues/YCM.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,064   copying moleculekit/share/pdb2pqr/residues/YNM.dat -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,066   copying moleculekit/share/pdb2pqr/residues/YNM.xml -> build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues
2024-03-27T10:34:08,068   creating build/lib.linux-armv7l-cpython-39/moleculekit/tmalign
2024-03-27T10:34:08,068   copying moleculekit/tmalign/tmalign_util.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/tmalign
2024-03-27T10:34:08,091   copying moleculekit/tmalign/tmalign_util.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/tmalign
2024-03-27T10:34:08,093   copying moleculekit/tmalign/tmalignlib.pxd -> build/lib.linux-armv7l-cpython-39/moleculekit/tmalign
2024-03-27T10:34:08,095   creating build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/include
2024-03-27T10:34:08,096   copying moleculekit/tmalign/include/TMAlign.h -> build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/include
2024-03-27T10:34:08,098   creating build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/src
2024-03-27T10:34:08,098   copying moleculekit/tmalign/src/TMAlign.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/src
2024-03-27T10:34:08,104   creating build/lib.linux-armv7l-cpython-39/moleculekit/wrapping
2024-03-27T10:34:08,105   copying moleculekit/wrapping/wrapping.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/wrapping
2024-03-27T10:34:08,126   copying moleculekit/wrapping/wrapping.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/wrapping
2024-03-27T10:34:08,128   creating build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi
2024-03-27T10:34:08,129   copying moleculekit/interactions/cationpi/cationpi.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi
2024-03-27T10:34:08,152   copying moleculekit/interactions/cationpi/cationpi.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi
2024-03-27T10:34:08,155   creating build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds
2024-03-27T10:34:08,156   copying moleculekit/interactions/hbonds/hbonds.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds
2024-03-27T10:34:08,176   copying moleculekit/interactions/hbonds/hbonds.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds
2024-03-27T10:34:08,178   creating build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi
2024-03-27T10:34:08,179   copying moleculekit/interactions/pipi/pipi.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi
2024-03-27T10:34:08,206   copying moleculekit/interactions/pipi/pipi.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi
2024-03-27T10:34:08,208   creating build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole
2024-03-27T10:34:08,209   copying moleculekit/interactions/sigmahole/sigmahole.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole
2024-03-27T10:34:08,230   copying moleculekit/interactions/sigmahole/sigmahole.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole
2024-03-27T10:34:08,232   creating build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/binpos
2024-03-27T10:34:08,233   copying moleculekit/fileformats/binpos/binpos.c -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/binpos
2024-03-27T10:34:08,247   copying moleculekit/fileformats/binpos/binpos.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/binpos
2024-03-27T10:34:08,250   copying moleculekit/fileformats/binpos/binposlib.pxd -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/binpos
2024-03-27T10:34:08,252   creating build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/binpos/include
2024-03-27T10:34:08,252   copying moleculekit/fileformats/binpos/include/binposplugin.h -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/binpos/include
2024-03-27T10:34:08,254   copying moleculekit/fileformats/binpos/include/largefiles.h -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/binpos/include
2024-03-27T10:34:08,256   copying moleculekit/fileformats/binpos/include/molfile_plugin.h -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/binpos/include
2024-03-27T10:34:08,259   creating build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/binpos/src
2024-03-27T10:34:08,260   copying moleculekit/fileformats/binpos/src/binposplugin.c -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/binpos/src
2024-03-27T10:34:08,262   creating build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/dcd
2024-03-27T10:34:08,263   copying moleculekit/fileformats/dcd/dcd.c -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/dcd
2024-03-27T10:34:08,284   copying moleculekit/fileformats/dcd/dcd.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/dcd
2024-03-27T10:34:08,286   copying moleculekit/fileformats/dcd/dcdlib.pxd -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/dcd
2024-03-27T10:34:08,288   creating build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/dcd/include
2024-03-27T10:34:08,289   copying moleculekit/fileformats/dcd/include/dcdplugin.h -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/dcd/include
2024-03-27T10:34:08,292   copying moleculekit/fileformats/dcd/include/endianswap.h -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/dcd/include
2024-03-27T10:34:08,294   copying moleculekit/fileformats/dcd/include/fastio.h -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/dcd/include
2024-03-27T10:34:08,297   copying moleculekit/fileformats/dcd/include/largefiles.h -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/dcd/include
2024-03-27T10:34:08,299   copying moleculekit/fileformats/dcd/include/molfile_plugin.h -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/dcd/include
2024-03-27T10:34:08,302   creating build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/dcd/src
2024-03-27T10:34:08,303   copying moleculekit/fileformats/dcd/src/dcdplugin.c -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/dcd/src
2024-03-27T10:34:08,306   creating build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc
2024-03-27T10:34:08,307   copying moleculekit/fileformats/xtc/trr.c -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc
2024-03-27T10:34:08,336   copying moleculekit/fileformats/xtc/trr.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc
2024-03-27T10:34:08,339   copying moleculekit/fileformats/xtc/trrlib.pxd -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc
2024-03-27T10:34:08,341   copying moleculekit/fileformats/xtc/xdrlib.pxd -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc
2024-03-27T10:34:08,343   copying moleculekit/fileformats/xtc/xtc.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc
2024-03-27T10:34:08,364   copying moleculekit/fileformats/xtc/xtc.pyx -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc
2024-03-27T10:34:08,366   copying moleculekit/fileformats/xtc/xtclib.pxd -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc
2024-03-27T10:34:08,367   creating build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/include
2024-03-27T10:34:08,368   copying moleculekit/fileformats/xtc/include/trr_header.h -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/include
2024-03-27T10:34:08,370   copying moleculekit/fileformats/xtc/include/xdr_seek.h -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/include
2024-03-27T10:34:08,372   copying moleculekit/fileformats/xtc/include/xdrfile.h -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/include
2024-03-27T10:34:08,375   copying moleculekit/fileformats/xtc/include/xdrfile_trr.h -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/include
2024-03-27T10:34:08,376   copying moleculekit/fileformats/xtc/include/xdrfile_xtc.h -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/include
2024-03-27T10:34:08,378   copying moleculekit/fileformats/xtc/include/xtc.h -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/include
2024-03-27T10:34:08,380   creating build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/src
2024-03-27T10:34:08,381   copying moleculekit/fileformats/xtc/src/xdr_seek.c -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/src
2024-03-27T10:34:08,383   copying moleculekit/fileformats/xtc/src/xdrfile.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/src
2024-03-27T10:34:08,386   copying moleculekit/fileformats/xtc/src/xdrfile_trr.c -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/src
2024-03-27T10:34:08,389   copying moleculekit/fileformats/xtc/src/xdrfile_xtc.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/src
2024-03-27T10:34:08,391   copying moleculekit/fileformats/xtc/src/xtc.cpp -> build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/src
2024-03-27T10:34:08,403   UPDATING build/lib.linux-armv7l-cpython-39/moleculekit/_version.py
2024-03-27T10:34:08,404   set build/lib.linux-armv7l-cpython-39/moleculekit/_version.py to '1.8.28'
2024-03-27T10:34:08,404   running build_ext
2024-03-27T10:34:08,416   building 'moleculekit.interactions.hbonds' extension
2024-03-27T10:34:08,417   creating build/temp.linux-armv7l-cpython-39
2024-03-27T10:34:08,417   creating build/temp.linux-armv7l-cpython-39/moleculekit
2024-03-27T10:34:08,418   creating build/temp.linux-armv7l-cpython-39/moleculekit/interactions
2024-03-27T10:34:08,419   creating build/temp.linux-armv7l-cpython-39/moleculekit/interactions/hbonds
2024-03-27T10:34:08,420   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/interactions/hbonds/hbonds.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/interactions/hbonds/hbonds.o -O3
2024-03-27T10:34:08,713   In file included from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2024-03-27T10:34:08,713                    from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2024-03-27T10:34:08,713                    from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2024-03-27T10:34:08,713                    from moleculekit/interactions/hbonds/hbonds.cpp:1235:
2024-03-27T10:34:08,713   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-03-27T10:34:08,713      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-03-27T10:34:08,714         |  ^~~~~~~
2024-03-27T10:34:31,947   moleculekit/interactions/hbonds/hbonds.cpp: In function ‘PyObject* __pyx_pw_11moleculekit_12interactions_6hbonds_1calculate(PyObject*, PyObject* const*, Py_ssize_t, PyObject*)’:
2024-03-27T10:34:31,947   moleculekit/interactions/hbonds/hbonds.cpp:20989:52: warning: ‘__pyx_v_d_idx_h’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2024-03-27T10:34:31,947   20989 |             (__pyx_v_results[__pyx_v_f]).push_back(__pyx_v_d_idx_h);
2024-03-27T10:34:31,947         |                                                    ^~~~~~~~~~~~~~~
2024-03-27T10:34:31,948   moleculekit/interactions/hbonds/hbonds.cpp:20002:57: note: ‘__pyx_v_d_idx_h’ was declared here
2024-03-27T10:34:31,948   20002 |   __pyx_t_11moleculekit_12interactions_6hbonds_UINT32_t __pyx_v_d_idx_h;
2024-03-27T10:34:31,948         |                                                         ^~~~~~~~~~~~~~~
2024-03-27T10:34:35,172   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/interactions/hbonds/hbonds.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds.cpython-39-arm-linux-gnueabihf.so
2024-03-27T10:34:35,487   building 'moleculekit.interactions.pipi' extension
2024-03-27T10:34:35,488   creating build/temp.linux-armv7l-cpython-39/moleculekit/interactions/pipi
2024-03-27T10:34:35,489   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/interactions/pipi/pipi.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/interactions/pipi/pipi.o -O3
2024-03-27T10:34:35,754   In file included from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2024-03-27T10:34:35,755                    from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2024-03-27T10:34:35,755                    from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2024-03-27T10:34:35,755                    from moleculekit/interactions/pipi/pipi.cpp:1235:
2024-03-27T10:34:35,755   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-03-27T10:34:35,755      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-03-27T10:34:35,755         |  ^~~~~~~
2024-03-27T10:35:04,135   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/interactions/pipi/pipi.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi.cpython-39-arm-linux-gnueabihf.so
2024-03-27T10:35:04,464   building 'moleculekit.interactions.cationpi' extension
2024-03-27T10:35:04,465   creating build/temp.linux-armv7l-cpython-39/moleculekit/interactions/cationpi
2024-03-27T10:35:04,466   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/interactions/cationpi/cationpi.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/interactions/cationpi/cationpi.o -O3
2024-03-27T10:35:04,700   In file included from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2024-03-27T10:35:04,701                    from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2024-03-27T10:35:04,701                    from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2024-03-27T10:35:04,701                    from moleculekit/interactions/cationpi/cationpi.cpp:1235:
2024-03-27T10:35:04,701   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-03-27T10:35:04,701      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-03-27T10:35:04,701         |  ^~~~~~~
2024-03-27T10:35:32,698   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/interactions/cationpi/cationpi.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi.cpython-39-arm-linux-gnueabihf.so
2024-03-27T10:35:33,017   building 'moleculekit.interactions.sigmahole' extension
2024-03-27T10:35:33,018   creating build/temp.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole
2024-03-27T10:35:33,019   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/interactions/sigmahole/sigmahole.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole/sigmahole.o -O3
2024-03-27T10:35:33,256   In file included from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2024-03-27T10:35:33,256                    from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2024-03-27T10:35:33,257                    from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2024-03-27T10:35:33,257                    from moleculekit/interactions/sigmahole/sigmahole.cpp:1235:
2024-03-27T10:35:33,257   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-03-27T10:35:33,257      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-03-27T10:35:33,257         |  ^~~~~~~
2024-03-27T10:36:00,713   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole/sigmahole.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole.cpython-39-arm-linux-gnueabihf.so
2024-03-27T10:36:01,032   building 'moleculekit.wrapping' extension
2024-03-27T10:36:01,032   creating build/temp.linux-armv7l-cpython-39/moleculekit/wrapping
2024-03-27T10:36:01,033   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/wrapping/wrapping.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/wrapping/wrapping.o -O3
2024-03-27T10:36:01,266   In file included from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2024-03-27T10:36:01,266                    from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2024-03-27T10:36:01,266                    from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2024-03-27T10:36:01,266                    from moleculekit/wrapping/wrapping.cpp:1235:
2024-03-27T10:36:01,266   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-03-27T10:36:01,266      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-03-27T10:36:01,267         |  ^~~~~~~
2024-03-27T10:36:27,160   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/wrapping/wrapping.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/wrapping.cpython-39-arm-linux-gnueabihf.so
2024-03-27T10:36:27,374   building 'moleculekit.bondguesser_utils' extension
2024-03-27T10:36:27,375   creating build/temp.linux-armv7l-cpython-39/moleculekit/bondguesser_utils
2024-03-27T10:36:27,376   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/bondguesser_utils/bondguesser_utils.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/bondguesser_utils/bondguesser_utils.o -O3
2024-03-27T10:36:27,607   In file included from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2024-03-27T10:36:27,607                    from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2024-03-27T10:36:27,608                    from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2024-03-27T10:36:27,608                    from moleculekit/bondguesser_utils/bondguesser_utils.cpp:1235:
2024-03-27T10:36:27,608   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-03-27T10:36:27,608      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-03-27T10:36:27,608         |  ^~~~~~~
2024-03-27T10:36:29,156   moleculekit/bondguesser_utils/bondguesser_utils.cpp: In function ‘PyObject* __pyx_pf_11moleculekit_17bondguesser_utils_make_grid_neighborlist_nonperiodic(PyObject*, __Pyx_memviewslice, __pyx_t_11moleculekit_17bondguesser_utils_UINT32_t, __pyx_t_11moleculekit_17bondguesser_utils_UINT32_t, __pyx_t_11moleculekit_17bondguesser_utils_UINT32_t)’:
2024-03-27T10:36:29,156   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19771:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} [-Wsign-compare]
2024-03-27T10:36:29,156   19771 |   for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) {
2024-03-27T10:36:29,156         |                       ~~~~~~~~~~^~~~~~~~~~~
2024-03-27T10:36:29,157   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19783:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} [-Wsign-compare]
2024-03-27T10:36:29,157   19783 |     for (__pyx_t_6 = 0; __pyx_t_6 < __pyx_t_5; __pyx_t_6+=1) {
2024-03-27T10:36:29,157         |                         ~~~~~~~~~~^~~~~~~~~~~
2024-03-27T10:36:29,157   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19795:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} [-Wsign-compare]
2024-03-27T10:36:29,157   19795 |       for (__pyx_t_9 = 0; __pyx_t_9 < __pyx_t_8; __pyx_t_9+=1) {
2024-03-27T10:36:29,157         |                           ~~~~~~~~~~^~~~~~~~~~~
2024-03-27T10:36:29,157   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19834:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-03-27T10:36:29,158   19834 |         __pyx_t_12 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2024-03-27T10:36:29,158         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-03-27T10:36:29,158   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19873:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-03-27T10:36:29,158   19873 |         __pyx_t_12 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2024-03-27T10:36:29,158         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-03-27T10:36:29,158   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19912:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-03-27T10:36:29,158   19912 |         __pyx_t_12 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2024-03-27T10:36:29,159         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-03-27T10:36:29,159   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19951:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-03-27T10:36:29,159   19951 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2024-03-27T10:36:29,159         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-03-27T10:36:29,159   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19957:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-03-27T10:36:29,159   19957 |         __pyx_t_13 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2024-03-27T10:36:29,160         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-03-27T10:36:29,160   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19998:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-03-27T10:36:29,160   19998 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2024-03-27T10:36:29,160         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-03-27T10:36:29,160   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20004:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-03-27T10:36:29,160   20004 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2024-03-27T10:36:29,160         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-03-27T10:36:29,161   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20045:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-03-27T10:36:29,161   20045 |         __pyx_t_13 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2024-03-27T10:36:29,161         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-03-27T10:36:29,161   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20051:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-03-27T10:36:29,161   20051 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2024-03-27T10:36:29,161         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-03-27T10:36:29,161   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20092:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-03-27T10:36:29,162   20092 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2024-03-27T10:36:29,162         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-03-27T10:36:29,162   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20145:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-03-27T10:36:29,162   20145 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2024-03-27T10:36:29,162         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-03-27T10:36:29,162   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20192:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-03-27T10:36:29,162   20192 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2024-03-27T10:36:29,163         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-03-27T10:36:29,163   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20233:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-03-27T10:36:29,163   20233 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2024-03-27T10:36:29,163         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-03-27T10:36:29,163   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20239:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-03-27T10:36:29,163   20239 |         __pyx_t_13 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2024-03-27T10:36:29,163         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-03-27T10:36:29,164   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20245:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-03-27T10:36:29,164   20245 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2024-03-27T10:36:29,164         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-03-27T10:36:29,164   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20292:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-03-27T10:36:29,164   20292 |         __pyx_t_13 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2024-03-27T10:36:29,164         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-03-27T10:36:29,164   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20298:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-03-27T10:36:29,165   20298 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2024-03-27T10:36:29,165         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-03-27T10:36:29,165   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20339:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-03-27T10:36:29,165   20339 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2024-03-27T10:36:29,165         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-03-27T10:36:29,165   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20351:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-03-27T10:36:29,165   20351 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2024-03-27T10:36:29,166         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-03-27T10:36:29,166   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20404:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-03-27T10:36:29,166   20404 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2024-03-27T10:36:29,166         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-03-27T10:36:29,185   moleculekit/bondguesser_utils/bondguesser_utils.cpp: In function ‘PyObject* __pyx_pf_11moleculekit_17bondguesser_utils_2grid_bonds(PyObject*, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, float, int, __Pyx_memviewslice, __Pyx_memviewslice)’:
2024-03-27T10:36:29,185   moleculekit/bondguesser_utils/bondguesser_utils.cpp:21026:37: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2024-03-27T10:36:29,185   21026 |       __pyx_t_6 = (__pyx_v_boxneigh == __pyx_v_n_boxes);
2024-03-27T10:36:29,185         |                    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
2024-03-27T10:36:29,186   moleculekit/bondguesser_utils/bondguesser_utils.cpp:21063:37: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2024-03-27T10:36:29,186   21063 |       __pyx_t_6 = (__pyx_v_boxneigh == __pyx_v_boxidx);
2024-03-27T10:36:29,186         |                    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
2024-03-27T10:36:52,287   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/bondguesser_utils/bondguesser_utils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils.cpython-39-arm-linux-gnueabihf.so
2024-03-27T10:36:52,592   building 'moleculekit.atomselect_utils' extension
2024-03-27T10:36:52,592   creating build/temp.linux-armv7l-cpython-39/moleculekit/atomselect_utils
2024-03-27T10:36:52,593   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/atomselect_utils/atomselect_utils.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/atomselect_utils/atomselect_utils.o -O3
2024-03-27T10:36:52,830   In file included from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2024-03-27T10:36:52,830                    from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2024-03-27T10:36:52,830                    from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2024-03-27T10:36:52,830                    from moleculekit/atomselect_utils/atomselect_utils.cpp:1252:
2024-03-27T10:36:52,830   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-03-27T10:36:52,831      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-03-27T10:36:52,831         |  ^~~~~~~
2024-03-27T10:36:54,544   moleculekit/atomselect_utils/atomselect_utils.cpp: In function ‘bool __pyx_f_11moleculekit_16atomselect_utils__find_connected_subfragment(int, int, const char*, const char*, const char*, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, std::vector<std::__cxx11::basic_string<char> >&, __Pyx_memviewslice, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&)’:
2024-03-27T10:36:54,545   moleculekit/atomselect_utils/atomselect_utils.cpp:23225:161: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_16atomselect_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2024-03-27T10:36:54,545   23225 |       __pyx_t_3 = ((*((__pyx_t_11moleculekit_16atomselect_utils_UINT32_t *) ( /* dim=0 */ (__pyx_v_uq_resid.data + __pyx_t_2 * __pyx_v_uq_resid.strides[0]) ))) != __pyx_v_resnum);
2024-03-27T10:36:54,545         |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
2024-03-27T10:36:54,550   moleculekit/atomselect_utils/atomselect_utils.cpp: In function ‘bool __pyx_f_11moleculekit_16atomselect_utils__find_subfragments(int, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, std::vector<std::__cxx11::basic_string<char> >&, __Pyx_memviewslice, std::vector<std::vector<int> >&)’:
2024-03-27T10:36:54,550   moleculekit/atomselect_utils/atomselect_utils.cpp:23477:163: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_16atomselect_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2024-03-27T10:36:54,550   23477 |         __pyx_t_6 = ((*((__pyx_t_11moleculekit_16atomselect_utils_UINT32_t *) ( /* dim=0 */ (__pyx_v_uq_resid.data + __pyx_t_5 * __pyx_v_uq_resid.strides[0]) ))) != __pyx_v_i);
2024-03-27T10:36:54,550         |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2024-03-27T10:36:54,555   moleculekit/atomselect_utils/atomselect_utils.cpp: In function ‘bool __pyx_f_11moleculekit_16atomselect_utils__find_subfragments_topologically(int, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, std::vector<std::__cxx11::basic_string<char> >&, __Pyx_memviewslice, std::vector<std::vector<int> >&)’:
2024-03-27T10:36:54,555   moleculekit/atomselect_utils/atomselect_utils.cpp:23744:163: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_16atomselect_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2024-03-27T10:36:54,556   23744 |         __pyx_t_6 = ((*((__pyx_t_11moleculekit_16atomselect_utils_UINT32_t *) ( /* dim=0 */ (__pyx_v_uq_resid.data + __pyx_t_5 * __pyx_v_uq_resid.strides[0]) ))) != __pyx_v_i);
2024-03-27T10:36:54,556         |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2024-03-27T10:37:24,746   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/atomselect_utils/atomselect_utils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils.cpython-39-arm-linux-gnueabihf.so
2024-03-27T10:37:25,075   building 'moleculekit.distance_utils' extension
2024-03-27T10:37:25,076   creating build/temp.linux-armv7l-cpython-39/moleculekit/distance_utils
2024-03-27T10:37:25,076   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/distance_utils/distance_utils.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/distance_utils/distance_utils.o -O3
2024-03-27T10:37:25,311   In file included from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2024-03-27T10:37:25,311                    from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2024-03-27T10:37:25,311                    from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2024-03-27T10:37:25,311                    from moleculekit/distance_utils/distance_utils.cpp:1235:
2024-03-27T10:37:25,312   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-03-27T10:37:25,312      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-03-27T10:37:25,312         |  ^~~~~~~
2024-03-27T10:37:26,988   moleculekit/distance_utils/distance_utils.cpp: In function ‘PyObject* __pyx_pf_11moleculekit_14distance_utils_2get_collisions(PyObject*, __Pyx_memviewslice, __Pyx_memviewslice, float)’:
2024-03-27T10:37:26,988   moleculekit/distance_utils/distance_utils.cpp:21329:33: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_14distance_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2024-03-27T10:37:26,988   21329 |   for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) {
2024-03-27T10:37:26,988         |                       ~~~~~~~~~~^~~~~~~~~~~
2024-03-27T10:37:26,989   moleculekit/distance_utils/distance_utils.cpp:21341:35: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_14distance_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2024-03-27T10:37:26,989   21341 |     for (__pyx_t_6 = 0; __pyx_t_6 < __pyx_t_5; __pyx_t_6+=1) {
2024-03-27T10:37:26,989         |                         ~~~~~~~~~~^~~~~~~~~~~
2024-03-27T10:38:00,040   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/distance_utils/distance_utils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils.cpython-39-arm-linux-gnueabihf.so
2024-03-27T10:38:00,389   building 'moleculekit.occupancy_utils' extension
2024-03-27T10:38:00,390   creating build/temp.linux-armv7l-cpython-39/moleculekit/occupancy_utils
2024-03-27T10:38:00,391   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/occupancy_utils/occupancy_utils.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/occupancy_utils/occupancy_utils.o -O3
2024-03-27T10:38:00,631   In file included from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2024-03-27T10:38:00,631                    from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2024-03-27T10:38:00,632                    from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2024-03-27T10:38:00,632                    from moleculekit/occupancy_utils/occupancy_utils.cpp:1235:
2024-03-27T10:38:00,632   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-03-27T10:38:00,632      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-03-27T10:38:00,632         |  ^~~~~~~
2024-03-27T10:38:23,655   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/occupancy_utils/occupancy_utils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils.cpython-39-arm-linux-gnueabihf.so
2024-03-27T10:38:23,871   building 'moleculekit.cython_utils' extension
2024-03-27T10:38:23,872   creating build/temp.linux-armv7l-cpython-39/moleculekit/cython_utils
2024-03-27T10:38:23,873   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/cython_utils/cython_utils.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/cython_utils/cython_utils.o -O3
2024-03-27T10:38:24,108   In file included from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2024-03-27T10:38:24,108                    from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2024-03-27T10:38:24,108                    from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2024-03-27T10:38:24,108                    from moleculekit/cython_utils/cython_utils.cpp:1235:
2024-03-27T10:38:24,108   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-03-27T10:38:24,108      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-03-27T10:38:24,108         |  ^~~~~~~
2024-03-27T10:38:49,505   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/cython_utils/cython_utils.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/cython_utils.cpython-39-arm-linux-gnueabihf.so
2024-03-27T10:38:49,825   building 'moleculekit.xtc' extension
2024-03-27T10:38:49,826   creating build/temp.linux-armv7l-cpython-39/moleculekit/fileformats
2024-03-27T10:38:49,826   creating build/temp.linux-armv7l-cpython-39/moleculekit/fileformats/xtc
2024-03-27T10:38:49,827   creating build/temp.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/src
2024-03-27T10:38:49,828   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/fileformats/xtc -Imoleculekit/fileformats/xtc/include/ -Imoleculekit/fileformats/xtc/ -I/tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/fileformats/xtc/src/xdrfile.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/src/xdrfile.o
2024-03-27T10:38:50,069   moleculekit/fileformats/xtc/src/xdrfile.cpp:66:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-03-27T10:38:50,069      66 |  "OK",
2024-03-27T10:38:50,070         |  ^~~~
2024-03-27T10:38:50,070   moleculekit/fileformats/xtc/src/xdrfile.cpp:67:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-03-27T10:38:50,070      67 |  "Header",
2024-03-27T10:38:50,070         |  ^~~~~~~~
2024-03-27T10:38:50,070   moleculekit/fileformats/xtc/src/xdrfile.cpp:68:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-03-27T10:38:50,070      68 |  "String",
2024-03-27T10:38:50,071         |  ^~~~~~~~
2024-03-27T10:38:50,071   moleculekit/fileformats/xtc/src/xdrfile.cpp:69:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-03-27T10:38:50,071      69 |  "Double",
2024-03-27T10:38:50,071         |  ^~~~~~~~
2024-03-27T10:38:50,071   moleculekit/fileformats/xtc/src/xdrfile.cpp:70:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-03-27T10:38:50,071      70 |  "Integer",
2024-03-27T10:38:50,071         |  ^~~~~~~~~
2024-03-27T10:38:50,072   moleculekit/fileformats/xtc/src/xdrfile.cpp:71:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-03-27T10:38:50,072      71 |  "Float",
2024-03-27T10:38:50,072         |  ^~~~~~~
2024-03-27T10:38:50,072   moleculekit/fileformats/xtc/src/xdrfile.cpp:72:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-03-27T10:38:50,072      72 |  "Unsigned integer",
2024-03-27T10:38:50,072         |  ^~~~~~~~~~~~~~~~~~
2024-03-27T10:38:50,072   moleculekit/fileformats/xtc/src/xdrfile.cpp:73:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-03-27T10:38:50,073      73 |  "Compressed 3D coordinate",
2024-03-27T10:38:50,073         |  ^~~~~~~~~~~~~~~~~~~~~~~~~~
2024-03-27T10:38:50,073   moleculekit/fileformats/xtc/src/xdrfile.cpp:74:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-03-27T10:38:50,073      74 |  "Closing file",
2024-03-27T10:38:50,073         |  ^~~~~~~~~~~~~~
2024-03-27T10:38:50,073   moleculekit/fileformats/xtc/src/xdrfile.cpp:75:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-03-27T10:38:50,073      75 |  "Magic number",
2024-03-27T10:38:50,074         |  ^~~~~~~~~~~~~~
2024-03-27T10:38:50,074   moleculekit/fileformats/xtc/src/xdrfile.cpp:76:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-03-27T10:38:50,074      76 |  "Not enough memory",
2024-03-27T10:38:50,074         |  ^~~~~~~~~~~~~~~~~~~
2024-03-27T10:38:50,074   moleculekit/fileformats/xtc/src/xdrfile.cpp:77:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-03-27T10:38:50,074      77 |  "End of file",
2024-03-27T10:38:50,074         |  ^~~~~~~~~~~~~
2024-03-27T10:38:50,075   moleculekit/fileformats/xtc/src/xdrfile.cpp:78:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-03-27T10:38:50,075      78 |  "File not found"
2024-03-27T10:38:50,075         |  ^~~~~~~~~~~~~~~~
2024-03-27T10:38:50,079   moleculekit/fileformats/xtc/src/xdrfile.cpp: In function ‘int sizeofint(int)’:
2024-03-27T10:38:50,079   moleculekit/fileformats/xtc/src/xdrfile.cpp:459:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:38:50,079     459 |     while (size >= num && num_of_bits < 32)
2024-03-27T10:38:50,079         |            ~~~~~^~~~~~
2024-03-27T10:38:50,079   moleculekit/fileformats/xtc/src/xdrfile.cpp: In function ‘int sizeofints(int, unsigned int*)’:
2024-03-27T10:38:50,080   moleculekit/fileformats/xtc/src/xdrfile.cpp:505:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-03-27T10:38:50,080     505 |     while (bytes[num_of_bytes] >= num)
2024-03-27T10:38:50,080         |            ~~~~~~~~~~~~~~~~~~~~^~~~~~
2024-03-27T10:38:50,082   moleculekit/fileformats/xtc/src/xdrfile.cpp: In function ‘void encodeints(int*, int, int, unsigned int*, unsigned int*)’:
2024-03-27T10:38:50,082   moleculekit/fileformats/xtc/src/xdrfile.cpp:614:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:38:50,082     614 |     if (num_of_bits >= num_of_bytes * 8)
2024-03-27T10:38:50,082         |         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
2024-03-27T10:38:50,083   moleculekit/fileformats/xtc/src/xdrfile.cpp:616:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:38:50,083     616 |   for (i = 0; i < num_of_bytes; i++)
2024-03-27T10:38:50,083         |               ~~^~~~~~~~~~~~~~
2024-03-27T10:38:50,083   moleculekit/fileformats/xtc/src/xdrfile.cpp:624:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:38:50,083     624 |   for (i = 0; i < num_of_bytes-1; i++)
2024-03-27T10:38:50,083         |               ~~^~~~~~~~~~~~~~~~
2024-03-27T10:38:50,083   moleculekit/fileformats/xtc/src/xdrfile.cpp: In function ‘int decodebits(int*, int)’:
2024-03-27T10:38:50,084   moleculekit/fileformats/xtc/src/xdrfile.cpp:664:16: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-03-27T10:38:50,084     664 |   if (lastbits < num_of_bits)
2024-03-27T10:38:50,084         |       ~~~~~~~~~^~~~~~~~~~~~~
2024-03-27T10:38:50,087   moleculekit/fileformats/xtc/src/xdrfile.cpp: In function ‘int xdrfile_decompress_coord_float(float*, int*, float*, XDRFILE*)’:
2024-03-27T10:38:50,087   moleculekit/fileformats/xtc/src/xdrfile.cpp:785:10: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-03-27T10:38:50,087     785 |  if(size3>xfp->buf1size)
2024-03-27T10:38:50,088         |     ~~~~~^~~~~~~~~~~~~~
2024-03-27T10:38:50,089   moleculekit/fileformats/xtc/src/xdrfile.cpp:842:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-03-27T10:38:50,089     842 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2024-03-27T10:38:50,089         |                   ^
2024-03-27T10:38:50,092   moleculekit/fileformats/xtc/src/xdrfile.cpp:932:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:38:50,092     932 |     if(countmjh >= size3 ) { return -1; }
2024-03-27T10:38:50,092         |        ~~~~~~~~~^~~~~~~~
2024-03-27T10:38:50,092   moleculekit/fileformats/xtc/src/xdrfile.cpp:935:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:38:50,092     935 |     if(countmjh >= size3 ) { return -1; }
2024-03-27T10:38:50,093         |        ~~~~~~~~~^~~~~~~~
2024-03-27T10:38:50,093   moleculekit/fileformats/xtc/src/xdrfile.cpp:938:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:38:50,093     938 |     if(countmjh >= size3 ) { return -1; }
2024-03-27T10:38:50,093         |        ~~~~~~~~~^~~~~~~~
2024-03-27T10:38:50,093   moleculekit/fileformats/xtc/src/xdrfile.cpp:945:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:38:50,093     945 |     if(countmjh >= size3 ) { return -1; }
2024-03-27T10:38:50,093         |        ~~~~~~~~~^~~~~~~~
2024-03-27T10:38:50,093   moleculekit/fileformats/xtc/src/xdrfile.cpp:948:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:38:50,094     948 |     if(countmjh >= size3 ) { return -1; }
2024-03-27T10:38:50,094         |        ~~~~~~~~~^~~~~~~~
2024-03-27T10:38:50,094   moleculekit/fileformats/xtc/src/xdrfile.cpp:951:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:38:50,094     951 |     if(countmjh >= size3 ) { return -1; }
2024-03-27T10:38:50,094         |        ~~~~~~~~~^~~~~~~~
2024-03-27T10:38:50,094   moleculekit/fileformats/xtc/src/xdrfile.cpp:756:17: warning: variable ‘minidx’ set but not used [-Wunused-but-set-variable]
2024-03-27T10:38:50,094     756 |  int smallidx,  minidx, maxidx;
2024-03-27T10:38:50,095         |                 ^~~~~~
2024-03-27T10:38:50,095   moleculekit/fileformats/xtc/src/xdrfile.cpp:759:25: warning: variable ‘larger’ set but not used [-Wunused-but-set-variable]
2024-03-27T10:38:50,095     759 |  int smallnum, smaller, larger, i, is_smaller, run;
2024-03-27T10:38:50,095         |                         ^~~~~~
2024-03-27T10:38:50,095   moleculekit/fileformats/xtc/src/xdrfile.cpp:763:6: warning: unused variable ‘errval’ [-Wunused-variable]
2024-03-27T10:38:50,095     763 |  int errval=1;
2024-03-27T10:38:50,095         |      ^~~~~~
2024-03-27T10:38:50,096   moleculekit/fileformats/xtc/src/xdrfile.cpp: In function ‘int xdrfile_compress_coord_float(float*, int, float, XDRFILE*)’:
2024-03-27T10:38:50,096   moleculekit/fileformats/xtc/src/xdrfile.cpp:1011:10: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-03-27T10:38:50,096    1011 |  if(size3>xfp->buf1size)
2024-03-27T10:38:50,097         |     ~~~~~^~~~~~~~~~~~~~
2024-03-27T10:38:50,098   moleculekit/fileformats/xtc/src/xdrfile.cpp:1068:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:38:50,098    1068 |     countmjh++; if( countmjh> size3) { return -1; }
2024-03-27T10:38:50,099         |                     ~~~~~~~~^~~~~~~
2024-03-27T10:38:50,099   moleculekit/fileformats/xtc/src/xdrfile.cpp:1084:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:38:50,099    1084 |    countmjh++; if( countmjh> size3) { return -1; }
2024-03-27T10:38:50,099         |                    ~~~~~~~~^~~~~~~
2024-03-27T10:38:50,099   moleculekit/fileformats/xtc/src/xdrfile.cpp:1098:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:38:50,100    1098 |    countmjh++; if( countmjh> size3) { return -1; }
2024-03-27T10:38:50,100         |                    ~~~~~~~~^~~~~~~
2024-03-27T10:38:50,101   moleculekit/fileformats/xtc/src/xdrfile.cpp:1137:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:38:50,101    1137 |  while (smallidx < LASTIDX && magicints[smallidx] < mindiff)
2024-03-27T10:38:50,102         |                  ^
2024-03-27T10:38:50,102   moleculekit/fileformats/xtc/src/xdrfile.cpp:1143:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-03-27T10:38:50,102    1143 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2024-03-27T10:38:50,102         |                   ^
2024-03-27T10:38:50,105   moleculekit/fileformats/xtc/src/xdrfile.cpp:1275:8: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:38:50,106    1275 |  if(tmp==(unsigned int)buf2[0])
2024-03-27T10:38:50,106         |     ~~~^~~~~~~~~~~~~~~~~~~~~~~
2024-03-27T10:38:50,106   moleculekit/fileformats/xtc/src/xdrfile.cpp:1001:6: warning: variable ‘errval’ set but not used [-Wunused-but-set-variable]
2024-03-27T10:38:50,106    1001 |  int errval;
2024-03-27T10:38:50,106         |      ^~~~~~
2024-03-27T10:38:50,109   moleculekit/fileformats/xtc/src/xdrfile.cpp: In function ‘int xdrfile_decompress_coord_double(double*, int*, double*, XDRFILE*)’:
2024-03-27T10:38:50,109   moleculekit/fileformats/xtc/src/xdrfile.cpp:1316:10: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-03-27T10:38:50,109    1316 |  if(size3>xfp->buf1size)
2024-03-27T10:38:50,109         |     ~~~~~^~~~~~~~~~~~~~
2024-03-27T10:38:50,111   moleculekit/fileformats/xtc/src/xdrfile.cpp:1377:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-03-27T10:38:50,111    1377 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2024-03-27T10:38:50,111         |                   ^
2024-03-27T10:38:50,113   moleculekit/fileformats/xtc/src/xdrfile.cpp:1289:25: warning: variable ‘minidx’ set but not used [-Wunused-but-set-variable]
2024-03-27T10:38:50,114    1289 |  int smallidx,  maxidx, minidx;
2024-03-27T10:38:50,114         |                         ^~~~~~
2024-03-27T10:38:50,114   moleculekit/fileformats/xtc/src/xdrfile.cpp:1292:25: warning: variable ‘larger’ set but not used [-Wunused-but-set-variable]
2024-03-27T10:38:50,114    1292 |  int smallnum, smaller, larger, i, is_smaller, run;
2024-03-27T10:38:50,114         |                         ^~~~~~
2024-03-27T10:38:50,114   moleculekit/fileformats/xtc/src/xdrfile.cpp:1297:6: warning: unused variable ‘errval’ [-Wunused-variable]
2024-03-27T10:38:50,114    1297 |  int errval=1;
2024-03-27T10:38:50,115         |      ^~~~~~
2024-03-27T10:38:50,116   moleculekit/fileformats/xtc/src/xdrfile.cpp: In function ‘int xdrfile_compress_coord_double(double*, int, double, XDRFILE*)’:
2024-03-27T10:38:50,116   moleculekit/fileformats/xtc/src/xdrfile.cpp:1513:10: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-03-27T10:38:50,116    1513 |  if(size3>xfp->buf1size) {
2024-03-27T10:38:50,116         |     ~~~~~^~~~~~~~~~~~~~
2024-03-27T10:38:50,120   moleculekit/fileformats/xtc/src/xdrfile.cpp:1628:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:38:50,120    1628 |  while (smallidx < LASTIDX && magicints[smallidx] < mindiff) {
2024-03-27T10:38:50,120         |                  ^
2024-03-27T10:38:50,121   moleculekit/fileformats/xtc/src/xdrfile.cpp:1633:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-03-27T10:38:50,121    1633 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2024-03-27T10:38:50,121         |                   ^
2024-03-27T10:38:50,124   moleculekit/fileformats/xtc/src/xdrfile.cpp:1743:8: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:38:50,125    1743 |  if(tmp==(unsigned int)buf2[0])
2024-03-27T10:38:50,125         |     ~~~^~~~~~~~~~~~~~~~~~~~~~~
2024-03-27T10:38:50,125   moleculekit/fileformats/xtc/src/xdrfile.cpp:1504:6: warning: variable ‘errval’ set but not used [-Wunused-but-set-variable]
2024-03-27T10:38:50,125    1504 |  int errval=1;
2024-03-27T10:38:50,125         |      ^~~~~~
2024-03-27T10:38:52,377   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/fileformats/xtc -Imoleculekit/fileformats/xtc/include/ -Imoleculekit/fileformats/xtc/ -I/tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/fileformats/xtc/src/xdrfile_xtc.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/src/xdrfile_xtc.o
2024-03-27T10:38:52,634   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/fileformats/xtc -Imoleculekit/fileformats/xtc/include/ -Imoleculekit/fileformats/xtc/ -I/tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/fileformats/xtc/src/xtc.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/src/xtc.o
2024-03-27T10:38:53,213   moleculekit/fileformats/xtc/src/xtc.cpp: In function ‘void xtc_read_new(char*, float*, float*, float*, int*, int, int)’:
2024-03-27T10:38:53,213   moleculekit/fileformats/xtc/src/xtc.cpp:238:23: warning: comparison of integer expressions of different signedness: ‘long long unsigned int’ and ‘int’ [-Wsign-compare]
2024-03-27T10:38:53,213     238 |   for (aidx = 0; aidx < natoms; aidx++)
2024-03-27T10:38:53,213         |                  ~~~~~^~~~~~~~
2024-03-27T10:38:53,222   moleculekit/fileformats/xtc/src/xtc.cpp: In function ‘void xtc_read_frame(char*, float*, float*, float*, int*, int, int, int, int)’:
2024-03-27T10:38:53,222   moleculekit/fileformats/xtc/src/xtc.cpp:546:24: warning: comparison of integer expressions of different signedness: ‘long long unsigned int’ and ‘int’ [-Wsign-compare]
2024-03-27T10:38:53,222     546 |    for (aidx = 0; aidx < natoms; aidx++)
2024-03-27T10:38:53,222         |                   ~~~~~^~~~~~~~
2024-03-27T10:38:53,224   moleculekit/fileformats/xtc/src/xtc.cpp:615:24: warning: comparison of integer expressions of different signedness: ‘long long unsigned int’ and ‘int’ [-Wsign-compare]
2024-03-27T10:38:53,225     615 |    for (aidx = 0; aidx < natoms; aidx++)
2024-03-27T10:38:53,225         |                   ~~~~~^~~~~~~~
2024-03-27T10:38:54,000   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/fileformats/xtc -Imoleculekit/fileformats/xtc/include/ -Imoleculekit/fileformats/xtc/ -I/tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/fileformats/xtc/xtc.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/xtc.o
2024-03-27T10:38:54,239   In file included from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2024-03-27T10:38:54,240                    from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2024-03-27T10:38:54,240                    from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2024-03-27T10:38:54,240                    from moleculekit/fileformats/xtc/xtc.cpp:1239:
2024-03-27T10:38:54,240   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-03-27T10:38:54,240      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-03-27T10:38:54,241         |  ^~~~~~~
2024-03-27T10:39:14,357   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/src/xdrfile.o build/temp.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/src/xdrfile_xtc.o build/temp.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/src/xtc.o build/temp.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/xtc.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/xtc.cpython-39-arm-linux-gnueabihf.so
2024-03-27T10:39:14,681   building 'moleculekit.trr' extension
2024-03-27T10:39:14,683   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/fileformats/xtc -Imoleculekit/fileformats/xtc/include/ -Imoleculekit/fileformats/xtc/ -I/tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/fileformats/xtc/src/xdr_seek.c -o build/temp.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/src/xdr_seek.o
2024-03-27T10:39:14,801   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/fileformats/xtc -Imoleculekit/fileformats/xtc/include/ -Imoleculekit/fileformats/xtc/ -I/tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/fileformats/xtc/src/xdrfile.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/src/xdrfile.o
2024-03-27T10:39:15,033   moleculekit/fileformats/xtc/src/xdrfile.cpp:66:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-03-27T10:39:15,034      66 |  "OK",
2024-03-27T10:39:15,034         |  ^~~~
2024-03-27T10:39:15,034   moleculekit/fileformats/xtc/src/xdrfile.cpp:67:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-03-27T10:39:15,034      67 |  "Header",
2024-03-27T10:39:15,035         |  ^~~~~~~~
2024-03-27T10:39:15,035   moleculekit/fileformats/xtc/src/xdrfile.cpp:68:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-03-27T10:39:15,035      68 |  "String",
2024-03-27T10:39:15,035         |  ^~~~~~~~
2024-03-27T10:39:15,035   moleculekit/fileformats/xtc/src/xdrfile.cpp:69:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-03-27T10:39:15,036      69 |  "Double",
2024-03-27T10:39:15,036         |  ^~~~~~~~
2024-03-27T10:39:15,036   moleculekit/fileformats/xtc/src/xdrfile.cpp:70:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-03-27T10:39:15,036      70 |  "Integer",
2024-03-27T10:39:15,036         |  ^~~~~~~~~
2024-03-27T10:39:15,037   moleculekit/fileformats/xtc/src/xdrfile.cpp:71:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-03-27T10:39:15,037      71 |  "Float",
2024-03-27T10:39:15,037         |  ^~~~~~~
2024-03-27T10:39:15,037   moleculekit/fileformats/xtc/src/xdrfile.cpp:72:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-03-27T10:39:15,037      72 |  "Unsigned integer",
2024-03-27T10:39:15,038         |  ^~~~~~~~~~~~~~~~~~
2024-03-27T10:39:15,038   moleculekit/fileformats/xtc/src/xdrfile.cpp:73:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-03-27T10:39:15,038      73 |  "Compressed 3D coordinate",
2024-03-27T10:39:15,038         |  ^~~~~~~~~~~~~~~~~~~~~~~~~~
2024-03-27T10:39:15,038   moleculekit/fileformats/xtc/src/xdrfile.cpp:74:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-03-27T10:39:15,039      74 |  "Closing file",
2024-03-27T10:39:15,039         |  ^~~~~~~~~~~~~~
2024-03-27T10:39:15,039   moleculekit/fileformats/xtc/src/xdrfile.cpp:75:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-03-27T10:39:15,039      75 |  "Magic number",
2024-03-27T10:39:15,039         |  ^~~~~~~~~~~~~~
2024-03-27T10:39:15,040   moleculekit/fileformats/xtc/src/xdrfile.cpp:76:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-03-27T10:39:15,040      76 |  "Not enough memory",
2024-03-27T10:39:15,040         |  ^~~~~~~~~~~~~~~~~~~
2024-03-27T10:39:15,040   moleculekit/fileformats/xtc/src/xdrfile.cpp:77:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-03-27T10:39:15,040      77 |  "End of file",
2024-03-27T10:39:15,041         |  ^~~~~~~~~~~~~
2024-03-27T10:39:15,041   moleculekit/fileformats/xtc/src/xdrfile.cpp:78:2: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-03-27T10:39:15,041      78 |  "File not found"
2024-03-27T10:39:15,041         |  ^~~~~~~~~~~~~~~~
2024-03-27T10:39:15,047   moleculekit/fileformats/xtc/src/xdrfile.cpp: In function ‘int sizeofint(int)’:
2024-03-27T10:39:15,047   moleculekit/fileformats/xtc/src/xdrfile.cpp:459:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:39:15,047     459 |     while (size >= num && num_of_bits < 32)
2024-03-27T10:39:15,048         |            ~~~~~^~~~~~
2024-03-27T10:39:15,048   moleculekit/fileformats/xtc/src/xdrfile.cpp: In function ‘int sizeofints(int, unsigned int*)’:
2024-03-27T10:39:15,048   moleculekit/fileformats/xtc/src/xdrfile.cpp:505:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-03-27T10:39:15,049     505 |     while (bytes[num_of_bytes] >= num)
2024-03-27T10:39:15,049         |            ~~~~~~~~~~~~~~~~~~~~^~~~~~
2024-03-27T10:39:15,052   moleculekit/fileformats/xtc/src/xdrfile.cpp: In function ‘void encodeints(int*, int, int, unsigned int*, unsigned int*)’:
2024-03-27T10:39:15,052   moleculekit/fileformats/xtc/src/xdrfile.cpp:614:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:39:15,052     614 |     if (num_of_bits >= num_of_bytes * 8)
2024-03-27T10:39:15,052         |         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
2024-03-27T10:39:15,053   moleculekit/fileformats/xtc/src/xdrfile.cpp:616:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:39:15,053     616 |   for (i = 0; i < num_of_bytes; i++)
2024-03-27T10:39:15,053         |               ~~^~~~~~~~~~~~~~
2024-03-27T10:39:15,053   moleculekit/fileformats/xtc/src/xdrfile.cpp:624:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:39:15,053     624 |   for (i = 0; i < num_of_bytes-1; i++)
2024-03-27T10:39:15,053         |               ~~^~~~~~~~~~~~~~~~
2024-03-27T10:39:15,054   moleculekit/fileformats/xtc/src/xdrfile.cpp: In function ‘int decodebits(int*, int)’:
2024-03-27T10:39:15,054   moleculekit/fileformats/xtc/src/xdrfile.cpp:664:16: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-03-27T10:39:15,054     664 |   if (lastbits < num_of_bits)
2024-03-27T10:39:15,054         |       ~~~~~~~~~^~~~~~~~~~~~~
2024-03-27T10:39:15,059   moleculekit/fileformats/xtc/src/xdrfile.cpp: In function ‘int xdrfile_decompress_coord_float(float*, int*, float*, XDRFILE*)’:
2024-03-27T10:39:15,059   moleculekit/fileformats/xtc/src/xdrfile.cpp:785:10: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-03-27T10:39:15,059     785 |  if(size3>xfp->buf1size)
2024-03-27T10:39:15,060         |     ~~~~~^~~~~~~~~~~~~~
2024-03-27T10:39:15,062   moleculekit/fileformats/xtc/src/xdrfile.cpp:842:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-03-27T10:39:15,062     842 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2024-03-27T10:39:15,062         |                   ^
2024-03-27T10:39:15,066   moleculekit/fileformats/xtc/src/xdrfile.cpp:932:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:39:15,066     932 |     if(countmjh >= size3 ) { return -1; }
2024-03-27T10:39:15,066         |        ~~~~~~~~~^~~~~~~~
2024-03-27T10:39:15,066   moleculekit/fileformats/xtc/src/xdrfile.cpp:935:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:39:15,066     935 |     if(countmjh >= size3 ) { return -1; }
2024-03-27T10:39:15,067         |        ~~~~~~~~~^~~~~~~~
2024-03-27T10:39:15,067   moleculekit/fileformats/xtc/src/xdrfile.cpp:938:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:39:15,067     938 |     if(countmjh >= size3 ) { return -1; }
2024-03-27T10:39:15,067         |        ~~~~~~~~~^~~~~~~~
2024-03-27T10:39:15,067   moleculekit/fileformats/xtc/src/xdrfile.cpp:945:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:39:15,068     945 |     if(countmjh >= size3 ) { return -1; }
2024-03-27T10:39:15,068         |        ~~~~~~~~~^~~~~~~~
2024-03-27T10:39:15,068   moleculekit/fileformats/xtc/src/xdrfile.cpp:948:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:39:15,068     948 |     if(countmjh >= size3 ) { return -1; }
2024-03-27T10:39:15,068         |        ~~~~~~~~~^~~~~~~~
2024-03-27T10:39:15,069   moleculekit/fileformats/xtc/src/xdrfile.cpp:951:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:39:15,069     951 |     if(countmjh >= size3 ) { return -1; }
2024-03-27T10:39:15,069         |        ~~~~~~~~~^~~~~~~~
2024-03-27T10:39:15,069   moleculekit/fileformats/xtc/src/xdrfile.cpp:756:17: warning: variable ‘minidx’ set but not used [-Wunused-but-set-variable]
2024-03-27T10:39:15,069     756 |  int smallidx,  minidx, maxidx;
2024-03-27T10:39:15,070         |                 ^~~~~~
2024-03-27T10:39:15,070   moleculekit/fileformats/xtc/src/xdrfile.cpp:759:25: warning: variable ‘larger’ set but not used [-Wunused-but-set-variable]
2024-03-27T10:39:15,070     759 |  int smallnum, smaller, larger, i, is_smaller, run;
2024-03-27T10:39:15,070         |                         ^~~~~~
2024-03-27T10:39:15,070   moleculekit/fileformats/xtc/src/xdrfile.cpp:763:6: warning: unused variable ‘errval’ [-Wunused-variable]
2024-03-27T10:39:15,070     763 |  int errval=1;
2024-03-27T10:39:15,071         |      ^~~~~~
2024-03-27T10:39:15,072   moleculekit/fileformats/xtc/src/xdrfile.cpp: In function ‘int xdrfile_compress_coord_float(float*, int, float, XDRFILE*)’:
2024-03-27T10:39:15,072   moleculekit/fileformats/xtc/src/xdrfile.cpp:1011:10: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-03-27T10:39:15,072    1011 |  if(size3>xfp->buf1size)
2024-03-27T10:39:15,072         |     ~~~~~^~~~~~~~~~~~~~
2024-03-27T10:39:15,075   moleculekit/fileformats/xtc/src/xdrfile.cpp:1068:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:39:15,075    1068 |     countmjh++; if( countmjh> size3) { return -1; }
2024-03-27T10:39:15,075         |                     ~~~~~~~~^~~~~~~
2024-03-27T10:39:15,076   moleculekit/fileformats/xtc/src/xdrfile.cpp:1084:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:39:15,076    1084 |    countmjh++; if( countmjh> size3) { return -1; }
2024-03-27T10:39:15,076         |                    ~~~~~~~~^~~~~~~
2024-03-27T10:39:15,077   moleculekit/fileformats/xtc/src/xdrfile.cpp:1098:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:39:15,077    1098 |    countmjh++; if( countmjh> size3) { return -1; }
2024-03-27T10:39:15,077         |                    ~~~~~~~~^~~~~~~
2024-03-27T10:39:15,079   moleculekit/fileformats/xtc/src/xdrfile.cpp:1137:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:39:15,079    1137 |  while (smallidx < LASTIDX && magicints[smallidx] < mindiff)
2024-03-27T10:39:15,079         |                  ^
2024-03-27T10:39:15,080   moleculekit/fileformats/xtc/src/xdrfile.cpp:1143:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-03-27T10:39:15,080    1143 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2024-03-27T10:39:15,080         |                   ^
2024-03-27T10:39:15,085   moleculekit/fileformats/xtc/src/xdrfile.cpp:1275:8: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:39:15,085    1275 |  if(tmp==(unsigned int)buf2[0])
2024-03-27T10:39:15,085         |     ~~~^~~~~~~~~~~~~~~~~~~~~~~
2024-03-27T10:39:15,086   moleculekit/fileformats/xtc/src/xdrfile.cpp:1001:6: warning: variable ‘errval’ set but not used [-Wunused-but-set-variable]
2024-03-27T10:39:15,086    1001 |  int errval;
2024-03-27T10:39:15,086         |      ^~~~~~
2024-03-27T10:39:15,089   moleculekit/fileformats/xtc/src/xdrfile.cpp: In function ‘int xdrfile_decompress_coord_double(double*, int*, double*, XDRFILE*)’:
2024-03-27T10:39:15,090   moleculekit/fileformats/xtc/src/xdrfile.cpp:1316:10: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-03-27T10:39:15,090    1316 |  if(size3>xfp->buf1size)
2024-03-27T10:39:15,090         |     ~~~~~^~~~~~~~~~~~~~
2024-03-27T10:39:15,092   moleculekit/fileformats/xtc/src/xdrfile.cpp:1377:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-03-27T10:39:15,093    1377 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2024-03-27T10:39:15,093         |                   ^
2024-03-27T10:39:15,097   moleculekit/fileformats/xtc/src/xdrfile.cpp:1289:25: warning: variable ‘minidx’ set but not used [-Wunused-but-set-variable]
2024-03-27T10:39:15,097    1289 |  int smallidx,  maxidx, minidx;
2024-03-27T10:39:15,097         |                         ^~~~~~
2024-03-27T10:39:15,097   moleculekit/fileformats/xtc/src/xdrfile.cpp:1292:25: warning: variable ‘larger’ set but not used [-Wunused-but-set-variable]
2024-03-27T10:39:15,097    1292 |  int smallnum, smaller, larger, i, is_smaller, run;
2024-03-27T10:39:15,098         |                         ^~~~~~
2024-03-27T10:39:15,098   moleculekit/fileformats/xtc/src/xdrfile.cpp:1297:6: warning: unused variable ‘errval’ [-Wunused-variable]
2024-03-27T10:39:15,098    1297 |  int errval=1;
2024-03-27T10:39:15,098         |      ^~~~~~
2024-03-27T10:39:15,100   moleculekit/fileformats/xtc/src/xdrfile.cpp: In function ‘int xdrfile_compress_coord_double(double*, int, double, XDRFILE*)’:
2024-03-27T10:39:15,100   moleculekit/fileformats/xtc/src/xdrfile.cpp:1513:10: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-03-27T10:39:15,100    1513 |  if(size3>xfp->buf1size) {
2024-03-27T10:39:15,100         |     ~~~~~^~~~~~~~~~~~~~
2024-03-27T10:39:15,106   moleculekit/fileformats/xtc/src/xdrfile.cpp:1628:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:39:15,106    1628 |  while (smallidx < LASTIDX && magicints[smallidx] < mindiff) {
2024-03-27T10:39:15,106         |                  ^
2024-03-27T10:39:15,107   moleculekit/fileformats/xtc/src/xdrfile.cpp:1633:19: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-03-27T10:39:15,107    1633 |  maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2024-03-27T10:39:15,107         |                   ^
2024-03-27T10:39:15,112   moleculekit/fileformats/xtc/src/xdrfile.cpp:1743:8: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:39:15,112    1743 |  if(tmp==(unsigned int)buf2[0])
2024-03-27T10:39:15,113         |     ~~~^~~~~~~~~~~~~~~~~~~~~~~
2024-03-27T10:39:15,113   moleculekit/fileformats/xtc/src/xdrfile.cpp:1504:6: warning: variable ‘errval’ set but not used [-Wunused-but-set-variable]
2024-03-27T10:39:15,113    1504 |  int errval=1;
2024-03-27T10:39:15,113         |      ^~~~~~
2024-03-27T10:39:17,340   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/fileformats/xtc -Imoleculekit/fileformats/xtc/include/ -Imoleculekit/fileformats/xtc/ -I/tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/fileformats/xtc/src/xdrfile_trr.c -o build/temp.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/src/xdrfile_trr.o
2024-03-27T10:39:17,435   moleculekit/fileformats/xtc/src/xdrfile_trr.c: In function ‘do_trnheader’:
2024-03-27T10:39:17,435   moleculekit/fileformats/xtc/src/xdrfile_trr.c:111:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2024-03-27T10:39:17,436     111 |         if (slen != strlen(version)+1)
2024-03-27T10:39:17,436         |                  ^~
2024-03-27T10:39:17,436   moleculekit/fileformats/xtc/src/xdrfile_trr.c:121:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2024-03-27T10:39:17,436     121 |         if (xdrfile_write_string(version,xd) != (strlen(version)+1) )
2024-03-27T10:39:17,436         |                                              ^~
2024-03-27T10:39:18,002   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/fileformats/xtc -Imoleculekit/fileformats/xtc/include/ -Imoleculekit/fileformats/xtc/ -I/tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/fileformats/xtc/trr.c -o build/temp.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/trr.o
2024-03-27T10:39:18,318   In file included from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2024-03-27T10:39:18,318                    from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2024-03-27T10:39:18,319                    from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2024-03-27T10:39:18,319                    from moleculekit/fileformats/xtc/trr.c:1231:
2024-03-27T10:39:18,319   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-03-27T10:39:18,319      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-03-27T10:39:18,319         |  ^~~~~~~
2024-03-27T10:39:18,938   moleculekit/fileformats/xtc/trr.c: In function ‘__pyx_pf_11moleculekit_3trr_17TRRTrajectoryFile_22_calc_len_and_offsets’:
2024-03-27T10:39:18,946   moleculekit/fileformats/xtc/trr.c:16322:37: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘Py_ssize_t’ {aka ‘int’} [-Wsign-compare]
2024-03-27T10:39:18,946   16322 |       __pyx_t_6 = (__pyx_v_n_frames == __pyx_t_14);
2024-03-27T10:39:18,947         |                                     ^~
2024-03-27T10:39:39,178   moleculekit/fileformats/xtc/trr.c: In function ‘__pyx_pw_11moleculekit_3trr_17TRRTrajectoryFile_17_write’:
2024-03-27T10:39:39,179   moleculekit/fileformats/xtc/trr.c:1133:40: warning: ‘__pyx_v_status’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2024-03-27T10:39:39,179    1133 |   #define PyInt_FromLong               PyLong_FromLong
2024-03-27T10:39:39,179         |                                        ^~~~~~~~~~~~~~~
2024-03-27T10:39:39,187   moleculekit/fileformats/xtc/trr.c:14230:7: note: ‘__pyx_v_status’ was declared here
2024-03-27T10:39:39,187   14230 |   int __pyx_v_status;
2024-03-27T10:39:39,187         |       ^~~~~~~~~~~~~~
2024-03-27T10:39:49,534   moleculekit/fileformats/xtc/trr.c: In function ‘__pyx_pf_11moleculekit_3trr_17TRRTrajectoryFile_12_read’:
2024-03-27T10:39:49,541   moleculekit/fileformats/xtc/trr.c:11529:19: warning: ‘__pyx_pybuffernd_forces.diminfo[2].shape’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2024-03-27T10:39:49,541   11529 |         } else if (unlikely(__pyx_t_29 >= __pyx_pybuffernd_forces.diminfo[2].shape)) __pyx_t_4 = 2;
2024-03-27T10:39:49,542         |                   ^
2024-03-27T10:39:49,548   moleculekit/fileformats/xtc/trr.c:11525:19: warning: ‘__pyx_pybuffernd_forces.diminfo[1].shape’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2024-03-27T10:39:49,548   11525 |         } else if (unlikely(__pyx_t_30 >= __pyx_pybuffernd_forces.diminfo[1].shape)) __pyx_t_4 = 1;
2024-03-27T10:39:49,549         |                   ^
2024-03-27T10:39:49,549   moleculekit/fileformats/xtc/trr.c:2479:95: warning: ‘__pyx_pybuffernd_forces.diminfo[0].strides’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2024-03-27T10:39:49,549    2479 | #define __Pyx_BufPtrCContig3d(type, buf, i0, s0, i1, s1, i2, s2) ((type)((char*)buf + i0 * s0 + i1 * s1) + i2)
2024-03-27T10:39:49,550         |                                                                                               ^
2024-03-27T10:39:49,555   moleculekit/fileformats/xtc/trr.c:10061:21: note: ‘__pyx_pybuffernd_forces.diminfo[0].strides’ was declared here
2024-03-27T10:39:49,555   10061 |   __Pyx_LocalBuf_ND __pyx_pybuffernd_forces;
2024-03-27T10:39:49,555         |                     ^~~~~~~~~~~~~~~~~~~~~~~
2024-03-27T10:39:49,561   moleculekit/fileformats/xtc/trr.c:11519:59: warning: ‘__pyx_pybuffernd_forces.diminfo[0].shape’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2024-03-27T10:39:49,561   11519 |           __pyx_t_28 += __pyx_pybuffernd_forces.diminfo[0].shape;
2024-03-27T10:39:49,561         |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
2024-03-27T10:39:49,568   moleculekit/fileformats/xtc/trr.c:11472:19: warning: ‘__pyx_pybuffernd_vel.diminfo[2].shape’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2024-03-27T10:39:49,568   11472 |         } else if (unlikely(__pyx_t_30 >= __pyx_pybuffernd_vel.diminfo[2].shape)) __pyx_t_4 = 2;
2024-03-27T10:39:49,568         |                   ^
2024-03-27T10:39:49,575   moleculekit/fileformats/xtc/trr.c:11468:19: warning: ‘__pyx_pybuffernd_vel.diminfo[1].shape’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2024-03-27T10:39:49,575   11468 |         } else if (unlikely(__pyx_t_29 >= __pyx_pybuffernd_vel.diminfo[1].shape)) __pyx_t_4 = 1;
2024-03-27T10:39:49,575         |                   ^
2024-03-27T10:39:49,576   moleculekit/fileformats/xtc/trr.c:2479:95: warning: ‘__pyx_pybuffernd_vel.diminfo[0].strides’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2024-03-27T10:39:49,576    2479 | #define __Pyx_BufPtrCContig3d(type, buf, i0, s0, i1, s1, i2, s2) ((type)((char*)buf + i0 * s0 + i1 * s1) + i2)
2024-03-27T10:39:49,576         |                                                                                               ^
2024-03-27T10:39:49,582   moleculekit/fileformats/xtc/trr.c:10077:21: note: ‘__pyx_pybuffernd_vel.diminfo[0].strides’ was declared here
2024-03-27T10:39:49,582   10077 |   __Pyx_LocalBuf_ND __pyx_pybuffernd_vel;
2024-03-27T10:39:49,582         |                     ^~~~~~~~~~~~~~~~~~~~
2024-03-27T10:39:49,588   moleculekit/fileformats/xtc/trr.c:11462:56: warning: ‘__pyx_pybuffernd_vel.diminfo[0].shape’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2024-03-27T10:39:49,588   11462 |           __pyx_t_28 += __pyx_pybuffernd_vel.diminfo[0].shape;
2024-03-27T10:39:49,588         |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
2024-03-27T10:39:49,594   moleculekit/fileformats/xtc/trr.c:11861:17: warning: ‘__pyx_pybuffernd_xyz_buffer.diminfo[1].shape’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2024-03-27T10:39:49,594   11861 |       } else if (unlikely(__pyx_t_29 >= __pyx_pybuffernd_xyz_buffer.diminfo[1].shape)) __pyx_t_4 = 1;
2024-03-27T10:39:49,594         |                 ^
2024-03-27T10:39:49,601   moleculekit/fileformats/xtc/trr.c:11857:17: warning: ‘__pyx_pybuffernd_xyz_buffer.diminfo[0].shape’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2024-03-27T10:39:49,601   11857 |       } else if (unlikely(__pyx_t_30 >= __pyx_pybuffernd_xyz_buffer.diminfo[0].shape)) __pyx_t_4 = 0;
2024-03-27T10:39:49,601         |                 ^
2024-03-27T10:39:49,608   moleculekit/fileformats/xtc/trr.c:11702:19: warning: ‘__pyx_pybuffernd_vel_buffer.diminfo[1].shape’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2024-03-27T10:39:49,608   11702 |         } else if (unlikely(__pyx_t_35 >= __pyx_pybuffernd_vel_buffer.diminfo[1].shape)) __pyx_t_4 = 1;
2024-03-27T10:39:49,608         |                   ^
2024-03-27T10:39:49,615   moleculekit/fileformats/xtc/trr.c:11698:19: warning: ‘__pyx_pybuffernd_vel_buffer.diminfo[0].shape’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2024-03-27T10:39:49,615   11698 |         } else if (unlikely(__pyx_t_36 >= __pyx_pybuffernd_vel_buffer.diminfo[0].shape)) __pyx_t_4 = 0;
2024-03-27T10:39:49,615         |                   ^
2024-03-27T10:39:49,621   moleculekit/fileformats/xtc/trr.c:11754:19: warning: ‘__pyx_pybuffernd_forces_buffer.diminfo[1].shape’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2024-03-27T10:39:49,621   11754 |         } else if (unlikely(__pyx_t_36 >= __pyx_pybuffernd_forces_buffer.diminfo[1].shape)) __pyx_t_4 = 1;
2024-03-27T10:39:49,621         |                   ^
2024-03-27T10:39:49,628   moleculekit/fileformats/xtc/trr.c:11750:19: warning: ‘__pyx_pybuffernd_forces_buffer.diminfo[0].shape’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2024-03-27T10:39:49,628   11750 |         } else if (unlikely(__pyx_t_35 >= __pyx_pybuffernd_forces_buffer.diminfo[0].shape)) __pyx_t_4 = 0;
2024-03-27T10:39:49,628         |                   ^
2024-03-27T10:39:56,056   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/src/xdr_seek.o build/temp.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/src/xdrfile.o build/temp.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/src/xdrfile_trr.o build/temp.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/trr.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/trr.cpython-39-arm-linux-gnueabihf.so
2024-03-27T10:39:56,243   building 'moleculekit.dcd' extension
2024-03-27T10:39:56,244   creating build/temp.linux-armv7l-cpython-39/moleculekit/fileformats/dcd
2024-03-27T10:39:56,244   creating build/temp.linux-armv7l-cpython-39/moleculekit/fileformats/dcd/src
2024-03-27T10:39:56,245   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/fileformats/dcd -Imoleculekit/fileformats/dcd/include/ -Imoleculekit/fileformats/dcd/ -I/tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/fileformats/dcd/dcd.c -o build/temp.linux-armv7l-cpython-39/moleculekit/fileformats/dcd/dcd.o
2024-03-27T10:39:56,570   In file included from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2024-03-27T10:39:56,570                    from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2024-03-27T10:39:56,570                    from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2024-03-27T10:39:56,570                    from moleculekit/fileformats/dcd/dcd.c:1226:
2024-03-27T10:39:56,570   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-03-27T10:39:56,570      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-03-27T10:39:56,571         |  ^~~~~~~
2024-03-27T10:39:57,603   In file included from moleculekit/fileformats/dcd/include/dcdplugin.h:1,
2024-03-27T10:39:57,603                    from moleculekit/fileformats/dcd/dcd.c:1232:
2024-03-27T10:39:57,604   moleculekit/fileformats/dcd/include/fastio.h:474:12: warning: ‘fio_write_str’ defined but not used [-Wunused-function]
2024-03-27T10:39:57,604     474 | static int fio_write_str(fio_fd fd, const char *str) {
2024-03-27T10:39:57,604         |            ^~~~~~~~~~~~~
2024-03-27T10:39:57,604   moleculekit/fileformats/dcd/include/fastio.h:470:12: warning: ‘fio_read_int32’ defined but not used [-Wunused-function]
2024-03-27T10:39:57,604     470 | static int fio_read_int32(fio_fd fd, int *i) {
2024-03-27T10:39:57,605         |            ^~~~~~~~~~~~~~
2024-03-27T10:39:57,605   moleculekit/fileformats/dcd/include/fastio.h:466:12: warning: ‘fio_write_int32’ defined but not used [-Wunused-function]
2024-03-27T10:39:57,605     466 | static int fio_write_int32(fio_fd fd, int i) {
2024-03-27T10:39:57,605         |            ^~~~~~~~~~~~~~~
2024-03-27T10:39:57,605   moleculekit/fileformats/dcd/include/fastio.h:457:19: warning: ‘fio_ftell’ defined but not used [-Wunused-function]
2024-03-27T10:39:57,605     457 | static fio_size_t fio_ftell(fio_fd fd) {
2024-03-27T10:39:57,605         |                   ^~~~~~~~~
2024-03-27T10:39:57,606   moleculekit/fileformats/dcd/include/fastio.h:450:19: warning: ‘fio_fseek’ defined but not used [-Wunused-function]
2024-03-27T10:39:57,606     450 | static fio_size_t fio_fseek(fio_fd fd, fio_size_t offset, int whence) {
2024-03-27T10:39:57,606         |                   ^~~~~~~~~
2024-03-27T10:39:57,606   moleculekit/fileformats/dcd/include/fastio.h:415:19: warning: ‘fio_readv’ defined but not used [-Wunused-function]
2024-03-27T10:39:57,606     415 | static fio_size_t fio_readv(fio_fd fd, const fio_iovec * iov, int iovcnt) {
2024-03-27T10:39:57,606         |                   ^~~~~~~~~
2024-03-27T10:39:57,606   moleculekit/fileformats/dcd/include/fastio.h:394:12: warning: ‘fio_fclose’ defined but not used [-Wunused-function]
2024-03-27T10:39:57,606     394 | static int fio_fclose(fio_fd fd) {
2024-03-27T10:39:57,607         |            ^~~~~~~~~~
2024-03-27T10:39:57,607   moleculekit/fileformats/dcd/include/fastio.h:366:12: warning: ‘fio_open’ defined but not used [-Wunused-function]
2024-03-27T10:39:57,607     366 | static int fio_open(const char *filename, int mode, fio_fd *fd) {
2024-03-27T10:39:57,607         |            ^~~~~~~~
2024-03-27T10:40:10,334   moleculekit/fileformats/dcd/dcd.c: In function ‘__pyx_pf_11moleculekit_3dcd_17DCDTrajectoryFile_18read’:
2024-03-27T10:40:10,335   moleculekit/fileformats/dcd/dcd.c:1128:40: warning: ‘__pyx_v_i’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2024-03-27T10:40:10,335    1128 |   #define PyInt_FromLong               PyLong_FromLong
2024-03-27T10:40:10,335         |                                        ^~~~~~~~~~~~~~~
2024-03-27T10:40:10,339   moleculekit/fileformats/dcd/dcd.c:7992:7: note: ‘__pyx_v_i’ was declared here
2024-03-27T10:40:10,339    7992 |   int __pyx_v_i;
2024-03-27T10:40:10,339         |       ^~~~~~~~~
2024-03-27T10:40:13,591   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/fileformats/dcd -Imoleculekit/fileformats/dcd/include/ -Imoleculekit/fileformats/dcd/ -I/tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/fileformats/dcd/src/dcdplugin.c -o build/temp.linux-armv7l-cpython-39/moleculekit/fileformats/dcd/src/dcdplugin.o
2024-03-27T10:40:13,777   moleculekit/fileformats/dcd/src/dcdplugin.c: In function ‘read_dcdheader’:
2024-03-27T10:40:13,778   moleculekit/fileformats/dcd/src/dcdplugin.c:150:55: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-03-27T10:40:13,778     150 |   else if (input_integer[0] == 84 && input_integer[1] == dcdcordmagic)
2024-03-27T10:40:13,778         |                                                       ^~
2024-03-27T10:40:13,778   moleculekit/fileformats/dcd/src/dcdplugin.c:173:54: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-03-27T10:40:13,778     173 |       if (input_integer[0] == 84 && input_integer[1] == dcdcordmagic)
2024-03-27T10:40:13,779         |                                                      ^~
2024-03-27T10:40:13,779   moleculekit/fileformats/dcd/src/dcdplugin.c:194:26: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-03-27T10:40:13,779     194 |     if (input_integer[0] != dcdcordmagic)
2024-03-27T10:40:13,779         |                          ^~
2024-03-27T10:40:13,782   moleculekit/fileformats/dcd/src/dcdplugin.c:409:47: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-03-27T10:40:13,782     409 |     if ((input_integer[0] + input_integer[1]) != ((*N) - (*NAMNF)) * 4)
2024-03-27T10:40:13,782         |                                               ^~
2024-03-27T10:40:13,782   moleculekit/fileformats/dcd/src/dcdplugin.c:428:47: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-03-27T10:40:13,783     428 |     if ((input_integer[0] + input_integer[1]) != ((*N) - (*NAMNF)) * 4)
2024-03-27T10:40:13,783         |                                               ^~
2024-03-27T10:40:13,786   moleculekit/fileformats/dcd/src/dcdplugin.c: In function ‘read_dcdstep’:
2024-03-27T10:40:13,787   moleculekit/fileformats/dcd/src/dcdplugin.c:651:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:40:13,787     651 |         if (tmpbuf[i] != sizeof(float) * N)
2024-03-27T10:40:13,787         |                       ^~
2024-03-27T10:40:13,787   moleculekit/fileformats/dcd/src/dcdplugin.c:659:49: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-03-27T10:40:13,787     659 |         if ((tmpbuf[2 * i] + tmpbuf[2 * i + 1]) != sizeof(float) * N)
2024-03-27T10:40:13,787         |                                                 ^~
2024-03-27T10:40:13,810   In file included from moleculekit/fileformats/dcd/src/dcdplugin.c:55:
2024-03-27T10:40:13,810   At top level:
2024-03-27T10:40:13,810   moleculekit/fileformats/dcd/include/endianswap.h:96:13: warning: ‘swap2_aligned’ defined but not used [-Wunused-function]
2024-03-27T10:40:13,810      96 | static void swap2_aligned(void *v, long ndata) {
2024-03-27T10:40:13,811         |             ^~~~~~~~~~~~~
2024-03-27T10:40:13,811   moleculekit/fileformats/dcd/include/endianswap.h:32:13: warning: ‘swap2_unaligned’ defined but not used [-Wunused-function]
2024-03-27T10:40:13,811      32 | static void swap2_unaligned(void *v, long ndata) {
2024-03-27T10:40:13,811         |             ^~~~~~~~~~~~~~~
2024-03-27T10:40:13,811   In file included from moleculekit/fileformats/dcd/src/dcdplugin.c:46:
2024-03-27T10:40:13,811   moleculekit/fileformats/dcd/include/fastio.h:474:12: warning: ‘fio_write_str’ defined but not used [-Wunused-function]
2024-03-27T10:40:13,811     474 | static int fio_write_str(fio_fd fd, const char *str) {
2024-03-27T10:40:13,812         |            ^~~~~~~~~~~~~
2024-03-27T10:40:13,812   moleculekit/fileformats/dcd/include/fastio.h:470:12: warning: ‘fio_read_int32’ defined but not used [-Wunused-function]
2024-03-27T10:40:13,812     470 | static int fio_read_int32(fio_fd fd, int *i) {
2024-03-27T10:40:13,812         |            ^~~~~~~~~~~~~~
2024-03-27T10:40:14,920   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/fileformats/dcd/dcd.o build/temp.linux-armv7l-cpython-39/moleculekit/fileformats/dcd/src/dcdplugin.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/dcd.cpython-39-arm-linux-gnueabihf.so
2024-03-27T10:40:15,067   building 'moleculekit.binpos' extension
2024-03-27T10:40:15,068   creating build/temp.linux-armv7l-cpython-39/moleculekit/fileformats/binpos
2024-03-27T10:40:15,069   creating build/temp.linux-armv7l-cpython-39/moleculekit/fileformats/binpos/src
2024-03-27T10:40:15,070   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/fileformats/binpos -Imoleculekit/fileformats/binpos/include/ -Imoleculekit/fileformats/binpos/ -I/tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/fileformats/binpos/binpos.c -o build/temp.linux-armv7l-cpython-39/moleculekit/fileformats/binpos/binpos.o
2024-03-27T10:40:15,394   In file included from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2024-03-27T10:40:15,395                    from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2024-03-27T10:40:15,395                    from /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/arrayobject.h:5,
2024-03-27T10:40:15,395                    from moleculekit/fileformats/binpos/binpos.c:1226:
2024-03-27T10:40:15,395   /tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-03-27T10:40:15,395      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-03-27T10:40:15,395         |  ^~~~~~~
2024-03-27T10:40:28,771   moleculekit/fileformats/binpos/binpos.c: In function ‘__pyx_pw_11moleculekit_6binpos_20BINPOSTrajectoryFile_7_read’:
2024-03-27T10:40:28,776   moleculekit/fileformats/binpos/binpos.c:8015:6: warning: ‘__pyx_v_status’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2024-03-27T10:40:28,776    8015 |   if (__pyx_t_1) {
2024-03-27T10:40:28,776         |      ^
2024-03-27T10:40:28,780   moleculekit/fileformats/binpos/binpos.c:7492:7: note: ‘__pyx_v_status’ was declared here
2024-03-27T10:40:28,781    7492 |   int __pyx_v_status;
2024-03-27T10:40:28,781         |       ^~~~~~~~~~~~~~
2024-03-27T10:40:28,782   moleculekit/fileformats/binpos/binpos.c:1128:40: warning: ‘__pyx_v_i’ may be used uninitialized in this function [-Wmaybe-uninitialized]
2024-03-27T10:40:28,782    1128 |   #define PyInt_FromLong               PyLong_FromLong
2024-03-27T10:40:28,782         |                                        ^~~~~~~~~~~~~~~
2024-03-27T10:40:28,786   moleculekit/fileformats/binpos/binpos.c:7489:7: note: ‘__pyx_v_i’ was declared here
2024-03-27T10:40:28,787    7489 |   int __pyx_v_i;
2024-03-27T10:40:28,787         |       ^~~~~~~~~
2024-03-27T10:40:32,407   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/fileformats/binpos -Imoleculekit/fileformats/binpos/include/ -Imoleculekit/fileformats/binpos/ -I/tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/fileformats/binpos/src/binposplugin.c -o build/temp.linux-armv7l-cpython-39/moleculekit/fileformats/binpos/src/binposplugin.o
2024-03-27T10:40:32,776   arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/fileformats/binpos/binpos.o build/temp.linux-armv7l-cpython-39/moleculekit/fileformats/binpos/src/binposplugin.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/binpos.cpython-39-arm-linux-gnueabihf.so
2024-03-27T10:40:32,929   building 'moleculekit.tmalign' extension
2024-03-27T10:40:32,930   creating build/temp.linux-armv7l-cpython-39/moleculekit/tmalign
2024-03-27T10:40:32,931   creating build/temp.linux-armv7l-cpython-39/moleculekit/tmalign/src
2024-03-27T10:40:32,933   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/tmalign -Imoleculekit/tmalign/include/ -Imoleculekit/tmalign/ -I/tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/tmalign/src/TMAlign.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/tmalign/src/TMAlign.o -w
2024-03-27T10:41:04,380   arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/tmalign -Imoleculekit/tmalign/include/ -Imoleculekit/tmalign/ -I/tmp/pip-build-env-05s5fda2/overlay/lib/python3.9/site-packages/numpy/core/include -I/usr/include/python3.9 -c moleculekit/tmalign/tmalign_util.cpp -o build/temp.linux-armv7l-cpython-39/moleculekit/tmalign/tmalign_util.o -w
2024-03-27T10:41:22,831   In file included from /usr/include/c++/10/vector:72,
2024-03-27T10:41:22,831                    from moleculekit/tmalign/tmalign_util.cpp:1250:
2024-03-27T10:41:22,831   /usr/include/c++/10/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]’:
2024-03-27T10:41:22,831   /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2024-03-27T10:41:22,831     426 |       vector<_Tp, _Alloc>::
2024-03-27T10:41:22,831         |       ^~~~~~~~~~~~~~~~~~~
2024-03-27T10:41:23,411   In file included from /usr/include/c++/10/vector:67,
2024-03-27T10:41:23,412                    from moleculekit/tmalign/tmalign_util.cpp:1250:
2024-03-27T10:41:23,412   /usr/include/c++/10/bits/stl_vector.h: In function ‘PyObject* __pyx_pw_11moleculekit_7tmalign_1tmalign(PyObject*, PyObject* const*, Py_ssize_t, PyObject*)’:
2024-03-27T10:41:23,412   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2024-03-27T10:41:23,412    1198 |    _M_realloc_insert(end(), __x);
2024-03-27T10:41:23,412         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2024-03-27T10:41:23,413   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2024-03-27T10:41:23,413    1198 |    _M_realloc_insert(end(), __x);
2024-03-27T10:41:23,413         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2024-03-27T10:41:23,413   /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2024-03-27T10:41:23,413    1198 |    _M_realloc_insert(end(), __x);
2024-03-27T10:41:23,414         |    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2024-03-27T10:41:25,875   arm-linux-gnueabihf-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/moleculekit/tmalign/src/TMAlign.o build/temp.linux-armv7l-cpython-39/moleculekit/tmalign/tmalign_util.o -L/usr/lib -o build/lib.linux-armv7l-cpython-39/moleculekit/tmalign.cpython-39-arm-linux-gnueabihf.so
2024-03-27T10:41:26,326   UPDATING build/lib.linux-armv7l-cpython-39/moleculekit/_version.py
2024-03-27T10:41:26,326   set build/lib.linux-armv7l-cpython-39/moleculekit/_version.py to '1.8.28'
2024-03-27T10:41:26,326   installing to build/bdist.linux-armv7l/wheel
2024-03-27T10:41:26,326   running install
2024-03-27T10:41:26,353   running install_lib
2024-03-27T10:41:26,359   creating build/bdist.linux-armv7l
2024-03-27T10:41:26,360   creating build/bdist.linux-armv7l/wheel
2024-03-27T10:41:26,363   creating build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:26,364   creating build/bdist.linux-armv7l/wheel/moleculekit/cython_utils
2024-03-27T10:41:26,365   copying build/lib.linux-armv7l-cpython-39/moleculekit/cython_utils/cython_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/cython_utils
2024-03-27T10:41:26,388   copying build/lib.linux-armv7l-cpython-39/moleculekit/cython_utils/cython_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/cython_utils
2024-03-27T10:41:26,390   creating build/bdist.linux-armv7l/wheel/moleculekit/bondguesser_utils
2024-03-27T10:41:26,392   copying build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils/bondguesser_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/bondguesser_utils
2024-03-27T10:41:26,394   copying build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils/bondguesser_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/bondguesser_utils
2024-03-27T10:41:26,415   copying build/lib.linux-armv7l-cpython-39/moleculekit/distance.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:26,417   copying build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:26,443   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions
2024-03-27T10:41:26,444   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2024-03-27T10:41:26,474   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/sigmahole
2024-03-27T10:41:26,476   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole/sigmahole.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/sigmahole
2024-03-27T10:41:26,519   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole/sigmahole.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/sigmahole
2024-03-27T10:41:26,523   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2024-03-27T10:41:26,558   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2024-03-27T10:41:26,594   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/pipi
2024-03-27T10:41:26,596   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi/pipi.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/pipi
2024-03-27T10:41:26,599   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/pipi/pipi.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/pipi
2024-03-27T10:41:26,629   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/sigmahole.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2024-03-27T10:41:26,659   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/hbonds
2024-03-27T10:41:26,660   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds/hbonds.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/hbonds
2024-03-27T10:41:26,682   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/hbonds/hbonds.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/hbonds
2024-03-27T10:41:26,684   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2024-03-27T10:41:26,686   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/cationpi
2024-03-27T10:41:26,687   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi/cationpi.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/cationpi
2024-03-27T10:41:26,707   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/cationpi/cationpi.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/cationpi
2024-03-27T10:41:26,709   copying build/lib.linux-armv7l-cpython-39/moleculekit/interactions/interactions.py -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2024-03-27T10:41:26,712   copying build/lib.linux-armv7l-cpython-39/moleculekit/dcd.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:26,729   creating build/bdist.linux-armv7l/wheel/moleculekit/wrapping
2024-03-27T10:41:26,730   copying build/lib.linux-armv7l-cpython-39/moleculekit/wrapping/wrapping.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/wrapping
2024-03-27T10:41:26,733   copying build/lib.linux-armv7l-cpython-39/moleculekit/wrapping/wrapping.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/wrapping
2024-03-27T10:41:26,756   copying build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:26,758   copying build/lib.linux-armv7l-cpython-39/moleculekit/rcsb.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:26,760   creating build/bdist.linux-armv7l/wheel/moleculekit/occupancy_utils
2024-03-27T10:41:26,761   copying build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils/occupancy_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/occupancy_utils
2024-03-27T10:41:26,763   copying build/lib.linux-armv7l-cpython-39/moleculekit/occupancy_utils/occupancy_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/occupancy_utils
2024-03-27T10:41:26,781   creating build/bdist.linux-armv7l/wheel/moleculekit/fileformats
2024-03-27T10:41:26,782   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/netcdf.py -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats
2024-03-27T10:41:26,785   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/utils.py -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats
2024-03-27T10:41:26,787   creating build/bdist.linux-armv7l/wheel/moleculekit/fileformats/binpos
2024-03-27T10:41:26,789   creating build/bdist.linux-armv7l/wheel/moleculekit/fileformats/binpos/include
2024-03-27T10:41:26,790   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/binpos/include/binposplugin.h -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/binpos/include
2024-03-27T10:41:26,792   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/binpos/include/molfile_plugin.h -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/binpos/include
2024-03-27T10:41:26,794   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/binpos/include/largefiles.h -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/binpos/include
2024-03-27T10:41:26,796   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/binpos/binpos.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/binpos
2024-03-27T10:41:26,798   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/binpos/binposlib.pxd -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/binpos
2024-03-27T10:41:26,800   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/binpos/binpos.c -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/binpos
2024-03-27T10:41:26,820   creating build/bdist.linux-armv7l/wheel/moleculekit/fileformats/binpos/src
2024-03-27T10:41:26,821   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/binpos/src/binposplugin.c -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/binpos/src
2024-03-27T10:41:26,823   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats
2024-03-27T10:41:26,825   creating build/bdist.linux-armv7l/wheel/moleculekit/fileformats/dcd
2024-03-27T10:41:26,826   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/dcd/dcd.c -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/dcd
2024-03-27T10:41:26,851   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/dcd/dcdlib.pxd -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/dcd
2024-03-27T10:41:26,854   creating build/bdist.linux-armv7l/wheel/moleculekit/fileformats/dcd/include
2024-03-27T10:41:26,855   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/dcd/include/dcdplugin.h -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/dcd/include
2024-03-27T10:41:26,857   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/dcd/include/endianswap.h -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/dcd/include
2024-03-27T10:41:26,859   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/dcd/include/fastio.h -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/dcd/include
2024-03-27T10:41:26,861   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/dcd/include/molfile_plugin.h -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/dcd/include
2024-03-27T10:41:26,863   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/dcd/include/largefiles.h -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/dcd/include
2024-03-27T10:41:26,865   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/dcd/dcd.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/dcd
2024-03-27T10:41:26,868   creating build/bdist.linux-armv7l/wheel/moleculekit/fileformats/dcd/src
2024-03-27T10:41:26,869   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/dcd/src/dcdplugin.c -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/dcd/src
2024-03-27T10:41:26,872   creating build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc
2024-03-27T10:41:26,873   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/xtc.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc
2024-03-27T10:41:26,894   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/trr.c -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc
2024-03-27T10:41:26,923   creating build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc/include
2024-03-27T10:41:26,924   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/include/xdrfile.h -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc/include
2024-03-27T10:41:26,927   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/include/xdrfile_trr.h -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc/include
2024-03-27T10:41:26,928   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/include/xdr_seek.h -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc/include
2024-03-27T10:41:26,930   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/include/xtc.h -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc/include
2024-03-27T10:41:26,932   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/include/xdrfile_xtc.h -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc/include
2024-03-27T10:41:26,933   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/include/trr_header.h -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc/include
2024-03-27T10:41:26,935   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/xtc.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc
2024-03-27T10:41:26,937   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/xtclib.pxd -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc
2024-03-27T10:41:26,938   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/xdrlib.pxd -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc
2024-03-27T10:41:26,940   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/trr.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc
2024-03-27T10:41:26,942   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/trrlib.pxd -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc
2024-03-27T10:41:26,944   creating build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc/src
2024-03-27T10:41:26,945   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/src/xtc.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc/src
2024-03-27T10:41:26,947   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/src/xdrfile_trr.c -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc/src
2024-03-27T10:41:26,950   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/src/xdrfile.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc/src
2024-03-27T10:41:26,953   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/src/xdrfile_xtc.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc/src
2024-03-27T10:41:26,955   copying build/lib.linux-armv7l-cpython-39/moleculekit/fileformats/xtc/src/xdr_seek.c -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc/src
2024-03-27T10:41:26,956   copying build/lib.linux-armv7l-cpython-39/moleculekit/_version.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:26,958   copying build/lib.linux-armv7l-cpython-39/moleculekit/rdkitintegration.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:26,960   copying build/lib.linux-armv7l-cpython-39/moleculekit/readers.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:26,964   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx
2024-03-27T10:41:26,966   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2024-03-27T10:41:26,967   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader/PdbxContainers.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2024-03-27T10:41:26,969   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2024-03-27T10:41:26,971   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader/PdbxReader.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2024-03-27T10:41:26,973   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/reader/PdbxParser.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2024-03-27T10:41:26,976   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx/writer
2024-03-27T10:41:26,977   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/writer/PdbxWriter.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/writer
2024-03-27T10:41:26,979   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/writer/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/writer
2024-03-27T10:41:26,980   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx
2024-03-27T10:41:26,982   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2024-03-27T10:41:26,983   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests/PdbxReaderTests.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2024-03-27T10:41:26,985   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests/PdbxReadWriteTests.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2024-03-27T10:41:26,987   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests/PdbxWriterTests.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2024-03-27T10:41:26,989   copying build/lib.linux-armv7l-cpython-39/moleculekit/pdbx/tests/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2024-03-27T10:41:26,991   creating build/bdist.linux-armv7l/wheel/moleculekit/ply
2024-03-27T10:41:26,992   copying build/lib.linux-armv7l-cpython-39/moleculekit/ply/lex.py -> build/bdist.linux-armv7l/wheel/moleculekit/ply
2024-03-27T10:41:26,995   copying build/lib.linux-armv7l-cpython-39/moleculekit/ply/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/ply
2024-03-27T10:41:26,997   copying build/lib.linux-armv7l-cpython-39/moleculekit/ply/yacc.py -> build/bdist.linux-armv7l/wheel/moleculekit/ply
2024-03-27T10:41:27,001   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:27,034   creating build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2024-03-27T10:41:27,036   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/tmalignlib.pxd -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2024-03-27T10:41:27,038   creating build/bdist.linux-armv7l/wheel/moleculekit/tmalign/include
2024-03-27T10:41:27,039   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/include/TMAlign.h -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign/include
2024-03-27T10:41:27,041   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/tmalign_util.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2024-03-27T10:41:27,044   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/tmalign_util.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2024-03-27T10:41:27,071   creating build/bdist.linux-armv7l/wheel/moleculekit/tmalign/src
2024-03-27T10:41:27,073   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign/src/TMAlign.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign/src
2024-03-27T10:41:27,164   creating build/bdist.linux-armv7l/wheel/moleculekit/atomselect_utils
2024-03-27T10:41:27,165   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils/atomselect_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect_utils
2024-03-27T10:41:27,197   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect_utils/atomselect_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect_utils
2024-03-27T10:41:27,200   copying build/lib.linux-armv7l-cpython-39/moleculekit/vmdviewer.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:27,202   copying build/lib.linux-armv7l-cpython-39/moleculekit/vmdgraphics.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:27,205   creating build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2024-03-27T10:41:27,206   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect/analyze.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2024-03-27T10:41:27,209   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect/languageparser.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2024-03-27T10:41:27,211   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2024-03-27T10:41:27,213   copying build/lib.linux-armv7l-cpython-39/moleculekit/atomselect/atomselect.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2024-03-27T10:41:27,216   copying build/lib.linux-armv7l-cpython-39/moleculekit/xtc.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:27,242   copying build/lib.linux-armv7l-cpython-39/moleculekit/periodictable.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:27,245   copying build/lib.linux-armv7l-cpython-39/moleculekit/tmalign.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:27,318   copying build/lib.linux-armv7l-cpython-39/moleculekit/version.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:27,321   creating build/bdist.linux-armv7l/wheel/moleculekit/tools
2024-03-27T10:41:27,322   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/preparation.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2024-03-27T10:41:27,325   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/atomtyper.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2024-03-27T10:41:27,328   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/crystalpacking.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2024-03-27T10:41:27,331   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/hhblitsprofile.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2024-03-27T10:41:27,333   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/preparation_customres.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2024-03-27T10:41:27,336   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/sequencestructuralalignment.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2024-03-27T10:41:27,339   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/voxeldescriptors.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2024-03-27T10:41:27,342   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/autosegment.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2024-03-27T10:41:27,345   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/docking.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2024-03-27T10:41:27,348   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/moleculechecks.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2024-03-27T10:41:27,350   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/detect.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2024-03-27T10:41:27,354   creating build/bdist.linux-armv7l/wheel/moleculekit/tools/obabel_tools
2024-03-27T10:41:27,355   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/obabel_tools/obabel_cli.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools/obabel_tools
2024-03-27T10:41:27,357   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/obabel_tools/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools/obabel_tools
2024-03-27T10:41:27,360   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2024-03-27T10:41:27,362   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/graphalignment.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2024-03-27T10:41:27,365   copying build/lib.linux-armv7l-cpython-39/moleculekit/tools/modelling.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2024-03-27T10:41:27,367   copying build/lib.linux-armv7l-cpython-39/moleculekit/cython_utils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:27,417   copying build/lib.linux-armv7l-cpython-39/moleculekit/align.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:27,420   copying build/lib.linux-armv7l-cpython-39/moleculekit/viewer.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:27,423   creating build/bdist.linux-armv7l/wheel/moleculekit/distance_utils
2024-03-27T10:41:27,425   copying build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils/distance_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/distance_utils
2024-03-27T10:41:27,460   copying build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils/distance_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/distance_utils
2024-03-27T10:41:27,463   creating build/bdist.linux-armv7l/wheel/moleculekit/projections
2024-03-27T10:41:27,464   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metrictmscore.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2024-03-27T10:41:27,467   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricplumed2.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2024-03-27T10:41:27,469   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricrmsd.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2024-03-27T10:41:27,472   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricdihedral.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2024-03-27T10:41:27,475   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/projection.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2024-03-27T10:41:27,476   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metriccoordinate.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2024-03-27T10:41:27,479   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricsecondarystructure.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2024-03-27T10:41:27,481   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricgyration.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2024-03-27T10:41:27,484   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricdistance.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2024-03-27T10:41:27,487   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricshell.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2024-03-27T10:41:27,489   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2024-03-27T10:41:27,491   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricfluctuation.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2024-03-27T10:41:27,493   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricsasa.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2024-03-27T10:41:27,496   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/util.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2024-03-27T10:41:27,498   copying build/lib.linux-armv7l-cpython-39/moleculekit/projections/metricsphericalcoordinate.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2024-03-27T10:41:27,500   copying build/lib.linux-armv7l-cpython-39/moleculekit/wrapping.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:27,574   copying build/lib.linux-armv7l-cpython-39/moleculekit/bondguesser_utils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:27,601   copying build/lib.linux-armv7l-cpython-39/moleculekit/molecule.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:27,606   copying build/lib.linux-armv7l-cpython-39/moleculekit/distance_utils.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:27,637   creating build/bdist.linux-armv7l/wheel/moleculekit/share
2024-03-27T10:41:27,639   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/ALA.cif -> build/bdist.linux-armv7l/wheel/moleculekit/share
2024-03-27T10:41:27,641   creating build/bdist.linux-armv7l/wheel/moleculekit/share/atomselect
2024-03-27T10:41:27,643   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/atomselect/atomselect.json -> build/bdist.linux-armv7l/wheel/moleculekit/share/atomselect
2024-03-27T10:41:27,645   creating build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr
2024-03-27T10:41:27,649   creating build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,650   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NLE.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,652   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/1MH.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,655   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,657   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LMQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,659   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HOX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,661   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/004.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,663   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MME.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,665   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/KYN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,667   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ESC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,669   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/0AF.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,671   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MEQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,673   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HYP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,676   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MVA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,678   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HPE.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,680   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2MR.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,682   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLZ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,684   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TYQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,686   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,688   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HQA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,690   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/P1L.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,692   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CGU.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,693   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,695   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/YNM.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,697   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IIL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,699   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLE.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,701   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2ML.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,704   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TY2.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,706   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GNC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,708   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/YCM.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,710   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NVA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,712   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/BTK.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,714   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,716   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/YCM.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,718   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,720   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GHG.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,722   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/BCS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,724   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DAB.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,726   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HTR.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,728   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PTR.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,729   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/AA4.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,732   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/BB8.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,734   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NAL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,736   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DPP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,738   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/BB8.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,740   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ESC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,742   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TRO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,744   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,745   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/0A1.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,748   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LYZ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,749   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2ML.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,751   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/M3L.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,754   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HYP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,756   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NVA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,758   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PTR.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,760   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GHG.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,762   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IGL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,764   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/I2M.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,766   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MME.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,768   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HQA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,770   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DAH.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,772   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GME.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,774   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,776   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ONL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,778   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IGL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,780   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PCA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,782   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CCS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,784   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NCY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,786   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/D4P.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,788   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/OMX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,790   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ABA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,793   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4IN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,795   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NLE.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,797   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,799   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LMQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,801   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/I2M.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,803   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CCS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,805   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2MR.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,807   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ME0.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,809   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/AHP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,811   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/YNM.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,814   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/FGL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,816   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,818   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MMO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,820   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PRK.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,822   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2GX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,825   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/OCY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,827   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PCA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,829   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DA2.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,831   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/BTK.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,833   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,835   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4PH.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,837   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/FGL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,839   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MEA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,841   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4PQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,843   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TPO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,845   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TPO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,847   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LME.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,849   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/PRK.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,851   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MEQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,853   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,855   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CGU.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,857   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4PQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,859   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/5JP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,861   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DAH.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,863   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MVA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,866   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TY2.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,868   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/004.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,871   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/SEP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,873   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TYQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,875   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HLU.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,877   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2AS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,879   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,881   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/APD.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,883   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/M3L.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,885   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HHK.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,887   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HTR.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,889   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ME0.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,891   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/TRO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,893   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,895   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NZC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,897   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ALN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,899   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2AS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,902   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NZC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,904   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MEA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,905   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLE.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,907   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MMO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,909   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/BCS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,912   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/APD.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,913   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/0BN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,916   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IIL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,917   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NCY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,920   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HLX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,922   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HOX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,924   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/5JP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,926   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IML.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,928   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4IN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,930   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/OCY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,932   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,934   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ONL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,936   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/OMX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,939   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/AA4.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,941   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/KYN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,943   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/.gitkeep -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,944   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HLU.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,946   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HHK.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,948   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/0BN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,950   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ORM.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,952   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/2GX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,955   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LME.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,956   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MEN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,959   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/IML.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,961   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ORM.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,963   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DPP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,965   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DA2.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,967   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/LYZ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,969   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/0A1.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,971   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/AHP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,973   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/0AF.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,976   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/4PH.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,978   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MEN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,980   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/DAB.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,982   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GNC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,984   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HPE.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,986   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/SEP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,988   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/D4P.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,990   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/CSP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,992   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/ABA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,994   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/P1L.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,997   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/MLZ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:27,999   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/03Y.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:28,001   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/GME.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:28,004   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/HLX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:28,006   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/03Y.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:28,008   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/NAL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:28,010   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/pdb2pqr/residues/1MH.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-03-27T10:41:28,012   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/backbone.cif -> build/bdist.linux-armv7l/wheel/moleculekit/share
2024-03-27T10:41:28,014   copying build/lib.linux-armv7l-cpython-39/moleculekit/share/opm_sequences.json -> build/bdist.linux-armv7l/wheel/moleculekit/share
2024-03-27T10:41:28,555   copying build/lib.linux-armv7l-cpython-39/moleculekit/writers.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:28,558   copying build/lib.linux-armv7l-cpython-39/moleculekit/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:28,560   copying build/lib.linux-armv7l-cpython-39/moleculekit/logging.ini -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:28,561   copying build/lib.linux-armv7l-cpython-39/moleculekit/config.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:28,563   copying build/lib.linux-armv7l-cpython-39/moleculekit/vmd_wrapper -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:28,565   copying build/lib.linux-armv7l-cpython-39/moleculekit/trr.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:28,597   copying build/lib.linux-armv7l-cpython-39/moleculekit/binpos.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:29,450   copying build/lib.linux-armv7l-cpython-39/moleculekit/pymolgraphics.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:29,454   copying build/lib.linux-armv7l-cpython-39/moleculekit/util.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:29,460   creating build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2024-03-27T10:41:29,463   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/test_smallmollib.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2024-03-27T10:41:29,468   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/test_smallmol.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2024-03-27T10:41:29,473   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/smallmollib.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2024-03-27T10:41:29,478   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/smallmol.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2024-03-27T10:41:29,485   creating build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2024-03-27T10:41:29,487   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools/clustering.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2024-03-27T10:41:29,492   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools/restrainedembed.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2024-03-27T10:41:29,495   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2024-03-27T10:41:29,499   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/tools/test_tools.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2024-03-27T10:41:29,505   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2024-03-27T10:41:29,509   copying build/lib.linux-armv7l-cpython-39/moleculekit/smallmol/util.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2024-03-27T10:41:29,514   copying build/lib.linux-armv7l-cpython-39/moleculekit/home.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:29,518   copying build/lib.linux-armv7l-cpython-39/moleculekit/dihedral.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:29,526   copying build/lib.linux-armv7l-cpython-39/moleculekit/opm.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-03-27T10:41:29,536   running install_egg_info
2024-03-27T10:41:29,548   Copying moleculekit.egg-info to build/bdist.linux-armv7l/wheel/moleculekit-1.8.28-py3.9.egg-info
2024-03-27T10:41:29,576   running install_scripts
2024-03-27T10:41:29,653   creating build/bdist.linux-armv7l/wheel/moleculekit-1.8.28.dist-info/WHEEL
2024-03-27T10:41:29,658   creating '/tmp/pip-wheel-sd_f87kq/.tmp-fuo1hvg4/moleculekit-1.8.28-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-03-27T10:41:29,663   adding 'moleculekit/__init__.py'
2024-03-27T10:41:29,667   adding 'moleculekit/_version.py'
2024-03-27T10:41:29,670   adding 'moleculekit/align.py'
2024-03-27T10:41:29,984   adding 'moleculekit/atomselect_utils.cpython-39-arm-linux-gnueabihf.so'
2024-03-27T10:41:30,147   adding 'moleculekit/binpos.cpython-39-arm-linux-gnueabihf.so'
2024-03-27T10:41:30,154   adding 'moleculekit/bondguesser.py'
2024-03-27T10:41:30,398   adding 'moleculekit/bondguesser_utils.cpython-39-arm-linux-gnueabihf.so'
2024-03-27T10:41:30,407   adding 'moleculekit/config.py'
2024-03-27T10:41:30,665   adding 'moleculekit/cython_utils.cpython-39-arm-linux-gnueabihf.so'
2024-03-27T10:41:30,839   adding 'moleculekit/dcd.cpython-39-arm-linux-gnueabihf.so'
2024-03-27T10:41:31,331   adding 'moleculekit/dihedral.py'
2024-03-27T10:41:31,543   adding 'moleculekit/distance.py'
2024-03-27T10:41:31,923   adding 'moleculekit/distance_utils.cpython-39-arm-linux-gnueabihf.so'
2024-03-27T10:41:32,411   adding 'moleculekit/home.py'
2024-03-27T10:41:32,662   adding 'moleculekit/logging.ini'
2024-03-27T10:41:33,121   adding 'moleculekit/molecule.py'
2024-03-27T10:41:33,562   adding 'moleculekit/occupancy_utils.cpython-39-arm-linux-gnueabihf.so'
2024-03-27T10:41:33,677   adding 'moleculekit/opm.py'
2024-03-27T10:41:33,683   adding 'moleculekit/periodictable.py'
2024-03-27T10:41:33,902   adding 'moleculekit/pymolgraphics.py'
2024-03-27T10:41:33,904   adding 'moleculekit/rcsb.py'
2024-03-27T10:41:33,906   adding 'moleculekit/rdkitintegration.py'
2024-03-27T10:41:33,920   adding 'moleculekit/readers.py'
2024-03-27T10:41:34,525   adding 'moleculekit/tmalign.cpython-39-arm-linux-gnueabihf.so'
2024-03-27T10:41:37,255   adding 'moleculekit/trr.cpython-39-arm-linux-gnueabihf.so'
2024-03-27T10:41:41,514   adding 'moleculekit/util.py'
2024-03-27T10:41:41,971   adding 'moleculekit/version.py'
2024-03-27T10:41:41,978   adding 'moleculekit/viewer.py'
2024-03-27T10:41:42,497   adding 'moleculekit/vmd_wrapper'
2024-03-27T10:41:42,814   adding 'moleculekit/vmdgraphics.py'
2024-03-27T10:41:43,271   adding 'moleculekit/vmdviewer.py'
2024-03-27T10:41:43,831   adding 'moleculekit/wrapping.cpython-39-arm-linux-gnueabihf.so'
2024-03-27T10:41:43,846   adding 'moleculekit/writers.py'
2024-03-27T10:41:44,114   adding 'moleculekit/xtc.cpython-39-arm-linux-gnueabihf.so'
2024-03-27T10:41:44,124   adding 'moleculekit/atomselect/__init__.py'
2024-03-27T10:41:44,126   adding 'moleculekit/atomselect/analyze.py'
2024-03-27T10:41:44,128   adding 'moleculekit/atomselect/atomselect.py'
2024-03-27T10:41:44,130   adding 'moleculekit/atomselect/languageparser.py'
2024-03-27T10:41:44,235   adding 'moleculekit/atomselect_utils/atomselect_utils.cpp'
2024-03-27T10:41:44,246   adding 'moleculekit/atomselect_utils/atomselect_utils.pyx'
2024-03-27T10:41:44,338   adding 'moleculekit/bondguesser_utils/bondguesser_utils.cpp'
2024-03-27T10:41:44,347   adding 'moleculekit/bondguesser_utils/bondguesser_utils.pyx'
2024-03-27T10:41:44,438   adding 'moleculekit/cython_utils/cython_utils.cpp'
2024-03-27T10:41:44,447   adding 'moleculekit/cython_utils/cython_utils.pyx'
2024-03-27T10:41:44,550   adding 'moleculekit/distance_utils/distance_utils.cpp'
2024-03-27T10:41:44,561   adding 'moleculekit/distance_utils/distance_utils.pyx'
2024-03-27T10:41:44,563   adding 'moleculekit/fileformats/__init__.py'
2024-03-27T10:41:44,569   adding 'moleculekit/fileformats/netcdf.py'
2024-03-27T10:41:44,571   adding 'moleculekit/fileformats/utils.py'
2024-03-27T10:41:44,632   adding 'moleculekit/fileformats/binpos/binpos.c'
2024-03-27T10:41:44,639   adding 'moleculekit/fileformats/binpos/binpos.pyx'
2024-03-27T10:41:44,641   adding 'moleculekit/fileformats/binpos/binposlib.pxd'
2024-03-27T10:41:44,642   adding 'moleculekit/fileformats/binpos/include/binposplugin.h'
2024-03-27T10:41:44,644   adding 'moleculekit/fileformats/binpos/include/largefiles.h'
2024-03-27T10:41:44,649   adding 'moleculekit/fileformats/binpos/include/molfile_plugin.h'
2024-03-27T10:41:44,652   adding 'moleculekit/fileformats/binpos/src/binposplugin.c'
2024-03-27T10:41:44,715   adding 'moleculekit/fileformats/dcd/dcd.c'
2024-03-27T10:41:44,723   adding 'moleculekit/fileformats/dcd/dcd.pyx'
2024-03-27T10:41:44,725   adding 'moleculekit/fileformats/dcd/dcdlib.pxd'
2024-03-27T10:41:44,728   adding 'moleculekit/fileformats/dcd/include/dcdplugin.h'
2024-03-27T10:41:44,729   adding 'moleculekit/fileformats/dcd/include/endianswap.h'
2024-03-27T10:41:44,731   adding 'moleculekit/fileformats/dcd/include/fastio.h'
2024-03-27T10:41:44,732   adding 'moleculekit/fileformats/dcd/include/largefiles.h'
2024-03-27T10:41:44,738   adding 'moleculekit/fileformats/dcd/include/molfile_plugin.h'
2024-03-27T10:41:44,744   adding 'moleculekit/fileformats/dcd/src/dcdplugin.c'
2024-03-27T10:41:44,840   adding 'moleculekit/fileformats/xtc/trr.c'
2024-03-27T10:41:44,851   adding 'moleculekit/fileformats/xtc/trr.pyx'
2024-03-27T10:41:44,852   adding 'moleculekit/fileformats/xtc/trrlib.pxd'
2024-03-27T10:41:44,854   adding 'moleculekit/fileformats/xtc/xdrlib.pxd'
2024-03-27T10:41:44,943   adding 'moleculekit/fileformats/xtc/xtc.cpp'
2024-03-27T10:41:44,952   adding 'moleculekit/fileformats/xtc/xtc.pyx'
2024-03-27T10:41:44,953   adding 'moleculekit/fileformats/xtc/xtclib.pxd'
2024-03-27T10:41:44,955   adding 'moleculekit/fileformats/xtc/include/trr_header.h'
2024-03-27T10:41:44,956   adding 'moleculekit/fileformats/xtc/include/xdr_seek.h'
2024-03-27T10:41:44,959   adding 'moleculekit/fileformats/xtc/include/xdrfile.h'
2024-03-27T10:41:44,960   adding 'moleculekit/fileformats/xtc/include/xdrfile_trr.h'
2024-03-27T10:41:44,961   adding 'moleculekit/fileformats/xtc/include/xdrfile_xtc.h'
2024-03-27T10:41:44,963   adding 'moleculekit/fileformats/xtc/include/xtc.h'
2024-03-27T10:41:44,965   adding 'moleculekit/fileformats/xtc/src/xdr_seek.c'
2024-03-27T10:41:44,971   adding 'moleculekit/fileformats/xtc/src/xdrfile.cpp'
2024-03-27T10:41:44,974   adding 'moleculekit/fileformats/xtc/src/xdrfile_trr.c'
2024-03-27T10:41:44,975   adding 'moleculekit/fileformats/xtc/src/xdrfile_xtc.cpp'
2024-03-27T10:41:44,977   adding 'moleculekit/fileformats/xtc/src/xtc.cpp'
2024-03-27T10:41:44,979   adding 'moleculekit/interactions/__init__.py'
2024-03-27T10:41:45,264   adding 'moleculekit/interactions/cationpi.cpython-39-arm-linux-gnueabihf.so'
2024-03-27T10:41:45,534   adding 'moleculekit/interactions/hbonds.cpython-39-arm-linux-gnueabihf.so'
2024-03-27T10:41:45,546   adding 'moleculekit/interactions/interactions.py'
2024-03-27T10:41:45,829   adding 'moleculekit/interactions/pipi.cpython-39-arm-linux-gnueabihf.so'
2024-03-27T10:41:46,118   adding 'moleculekit/interactions/sigmahole.cpython-39-arm-linux-gnueabihf.so'
2024-03-27T10:41:46,221   adding 'moleculekit/interactions/cationpi/cationpi.cpp'
2024-03-27T10:41:46,230   adding 'moleculekit/interactions/cationpi/cationpi.pyx'
2024-03-27T10:41:46,322   adding 'moleculekit/interactions/hbonds/hbonds.cpp'
2024-03-27T10:41:46,331   adding 'moleculekit/interactions/hbonds/hbonds.pyx'
2024-03-27T10:41:46,424   adding 'moleculekit/interactions/pipi/pipi.cpp'
2024-03-27T10:41:46,434   adding 'moleculekit/interactions/pipi/pipi.pyx'
2024-03-27T10:41:46,526   adding 'moleculekit/interactions/sigmahole/sigmahole.cpp'
2024-03-27T10:41:46,535   adding 'moleculekit/interactions/sigmahole/sigmahole.pyx'
2024-03-27T10:41:46,624   adding 'moleculekit/occupancy_utils/occupancy_utils.cpp'
2024-03-27T10:41:46,633   adding 'moleculekit/occupancy_utils/occupancy_utils.pyx'
2024-03-27T10:41:46,635   adding 'moleculekit/pdbx/__init__.py'
2024-03-27T10:41:46,639   adding 'moleculekit/pdbx/reader/PdbxContainers.py'
2024-03-27T10:41:46,642   adding 'moleculekit/pdbx/reader/PdbxParser.py'
2024-03-27T10:41:46,645   adding 'moleculekit/pdbx/reader/PdbxReader.py'
2024-03-27T10:41:46,646   adding 'moleculekit/pdbx/reader/__init__.py'
2024-03-27T10:41:46,649   adding 'moleculekit/pdbx/tests/PdbxReadWriteTests.py'
2024-03-27T10:41:46,651   adding 'moleculekit/pdbx/tests/PdbxReaderTests.py'
2024-03-27T10:41:46,653   adding 'moleculekit/pdbx/tests/PdbxWriterTests.py'
2024-03-27T10:41:46,654   adding 'moleculekit/pdbx/tests/__init__.py'
2024-03-27T10:41:46,656   adding 'moleculekit/pdbx/writer/PdbxWriter.py'
2024-03-27T10:41:46,658   adding 'moleculekit/pdbx/writer/__init__.py'
2024-03-27T10:41:46,660   adding 'moleculekit/ply/__init__.py'
2024-03-27T10:41:46,664   adding 'moleculekit/ply/lex.py'
2024-03-27T10:41:46,676   adding 'moleculekit/ply/yacc.py'
2024-03-27T10:41:46,679   adding 'moleculekit/projections/__init__.py'
2024-03-27T10:41:46,683   adding 'moleculekit/projections/metriccoordinate.py'
2024-03-27T10:41:46,687   adding 'moleculekit/projections/metricdihedral.py'
2024-03-27T10:41:46,691   adding 'moleculekit/projections/metricdistance.py'
2024-03-27T10:41:46,693   adding 'moleculekit/projections/metricfluctuation.py'
2024-03-27T10:41:46,695   adding 'moleculekit/projections/metricgyration.py'
2024-03-27T10:41:46,699   adding 'moleculekit/projections/metricplumed2.py'
2024-03-27T10:41:46,701   adding 'moleculekit/projections/metricrmsd.py'
2024-03-27T10:41:46,704   adding 'moleculekit/projections/metricsasa.py'
2024-03-27T10:41:46,707   adding 'moleculekit/projections/metricsecondarystructure.py'
2024-03-27T10:41:46,709   adding 'moleculekit/projections/metricshell.py'
2024-03-27T10:41:46,711   adding 'moleculekit/projections/metricsphericalcoordinate.py'
2024-03-27T10:41:46,712   adding 'moleculekit/projections/metrictmscore.py'
2024-03-27T10:41:46,714   adding 'moleculekit/projections/projection.py'
2024-03-27T10:41:46,716   adding 'moleculekit/projections/util.py'
2024-03-27T10:41:46,718   adding 'moleculekit/share/ALA.cif'
2024-03-27T10:41:46,720   adding 'moleculekit/share/backbone.cif'
2024-03-27T10:41:48,030   adding 'moleculekit/share/opm_sequences.json'
2024-03-27T10:41:48,115   adding 'moleculekit/share/atomselect/atomselect.json'
2024-03-27T10:41:48,120   adding 'moleculekit/share/pdb2pqr/residues/.gitkeep'
2024-03-27T10:41:48,121   adding 'moleculekit/share/pdb2pqr/residues/004.dat'
2024-03-27T10:41:48,123   adding 'moleculekit/share/pdb2pqr/residues/004.xml'
2024-03-27T10:41:48,124   adding 'moleculekit/share/pdb2pqr/residues/03Y.dat'
2024-03-27T10:41:48,125   adding 'moleculekit/share/pdb2pqr/residues/03Y.xml'
2024-03-27T10:41:48,127   adding 'moleculekit/share/pdb2pqr/residues/0A1.dat'
2024-03-27T10:41:48,128   adding 'moleculekit/share/pdb2pqr/residues/0A1.xml'
2024-03-27T10:41:48,129   adding 'moleculekit/share/pdb2pqr/residues/0AF.dat'
2024-03-27T10:41:48,130   adding 'moleculekit/share/pdb2pqr/residues/0AF.xml'
2024-03-27T10:41:48,132   adding 'moleculekit/share/pdb2pqr/residues/0BN.dat'
2024-03-27T10:41:48,133   adding 'moleculekit/share/pdb2pqr/residues/0BN.xml'
2024-03-27T10:41:48,135   adding 'moleculekit/share/pdb2pqr/residues/1MH.dat'
2024-03-27T10:41:48,136   adding 'moleculekit/share/pdb2pqr/residues/1MH.xml'
2024-03-27T10:41:48,137   adding 'moleculekit/share/pdb2pqr/residues/2AS.dat'
2024-03-27T10:41:48,139   adding 'moleculekit/share/pdb2pqr/residues/2AS.xml'
2024-03-27T10:41:48,140   adding 'moleculekit/share/pdb2pqr/residues/2GX.dat'
2024-03-27T10:41:48,142   adding 'moleculekit/share/pdb2pqr/residues/2GX.xml'
2024-03-27T10:41:48,144   adding 'moleculekit/share/pdb2pqr/residues/2ML.dat'
2024-03-27T10:41:48,145   adding 'moleculekit/share/pdb2pqr/residues/2ML.xml'
2024-03-27T10:41:48,146   adding 'moleculekit/share/pdb2pqr/residues/2MR.dat'
2024-03-27T10:41:48,148   adding 'moleculekit/share/pdb2pqr/residues/2MR.xml'
2024-03-27T10:41:48,150   adding 'moleculekit/share/pdb2pqr/residues/4IN.dat'
2024-03-27T10:41:48,151   adding 'moleculekit/share/pdb2pqr/residues/4IN.xml'
2024-03-27T10:41:48,153   adding 'moleculekit/share/pdb2pqr/residues/4PH.dat'
2024-03-27T10:41:48,154   adding 'moleculekit/share/pdb2pqr/residues/4PH.xml'
2024-03-27T10:41:48,156   adding 'moleculekit/share/pdb2pqr/residues/4PQ.dat'
2024-03-27T10:41:48,157   adding 'moleculekit/share/pdb2pqr/residues/4PQ.xml'
2024-03-27T10:41:48,159   adding 'moleculekit/share/pdb2pqr/residues/5JP.dat'
2024-03-27T10:41:48,160   adding 'moleculekit/share/pdb2pqr/residues/5JP.xml'
2024-03-27T10:41:48,162   adding 'moleculekit/share/pdb2pqr/residues/AA4.dat'
2024-03-27T10:41:48,163   adding 'moleculekit/share/pdb2pqr/residues/AA4.xml'
2024-03-27T10:41:48,164   adding 'moleculekit/share/pdb2pqr/residues/ABA.dat'
2024-03-27T10:41:48,166   adding 'moleculekit/share/pdb2pqr/residues/ABA.xml'
2024-03-27T10:41:48,167   adding 'moleculekit/share/pdb2pqr/residues/AHP.dat'
2024-03-27T10:41:48,169   adding 'moleculekit/share/pdb2pqr/residues/AHP.xml'
2024-03-27T10:41:48,170   adding 'moleculekit/share/pdb2pqr/residues/ALC.dat'
2024-03-27T10:41:48,172   adding 'moleculekit/share/pdb2pqr/residues/ALC.xml'
2024-03-27T10:41:48,173   adding 'moleculekit/share/pdb2pqr/residues/ALN.dat'
2024-03-27T10:41:48,175   adding 'moleculekit/share/pdb2pqr/residues/ALN.xml'
2024-03-27T10:41:48,176   adding 'moleculekit/share/pdb2pqr/residues/ALY.dat'
2024-03-27T10:41:48,178   adding 'moleculekit/share/pdb2pqr/residues/ALY.xml'
2024-03-27T10:41:48,179   adding 'moleculekit/share/pdb2pqr/residues/APD.dat'
2024-03-27T10:41:48,181   adding 'moleculekit/share/pdb2pqr/residues/APD.xml'
2024-03-27T10:41:48,182   adding 'moleculekit/share/pdb2pqr/residues/BB8.dat'
2024-03-27T10:41:48,184   adding 'moleculekit/share/pdb2pqr/residues/BB8.xml'
2024-03-27T10:41:48,185   adding 'moleculekit/share/pdb2pqr/residues/BCS.dat'
2024-03-27T10:41:48,187   adding 'moleculekit/share/pdb2pqr/residues/BCS.xml'
2024-03-27T10:41:48,188   adding 'moleculekit/share/pdb2pqr/residues/BTK.dat'
2024-03-27T10:41:48,189   adding 'moleculekit/share/pdb2pqr/residues/BTK.xml'
2024-03-27T10:41:48,191   adding 'moleculekit/share/pdb2pqr/residues/CCS.dat'
2024-03-27T10:41:48,192   adding 'moleculekit/share/pdb2pqr/residues/CCS.xml'
2024-03-27T10:41:48,193   adding 'moleculekit/share/pdb2pqr/residues/CGU.dat'
2024-03-27T10:41:48,195   adding 'moleculekit/share/pdb2pqr/residues/CGU.xml'
2024-03-27T10:41:48,196   adding 'moleculekit/share/pdb2pqr/residues/CSA.dat'
2024-03-27T10:41:48,197   adding 'moleculekit/share/pdb2pqr/residues/CSA.xml'
2024-03-27T10:41:48,199   adding 'moleculekit/share/pdb2pqr/residues/CSO.dat'
2024-03-27T10:41:48,200   adding 'moleculekit/share/pdb2pqr/residues/CSO.xml'
2024-03-27T10:41:48,202   adding 'moleculekit/share/pdb2pqr/residues/CSP.dat'
2024-03-27T10:41:48,203   adding 'moleculekit/share/pdb2pqr/residues/CSP.xml'
2024-03-27T10:41:48,205   adding 'moleculekit/share/pdb2pqr/residues/CSS.dat'
2024-03-27T10:41:48,206   adding 'moleculekit/share/pdb2pqr/residues/CSS.xml'
2024-03-27T10:41:48,208   adding 'moleculekit/share/pdb2pqr/residues/D4P.dat'
2024-03-27T10:41:48,209   adding 'moleculekit/share/pdb2pqr/residues/D4P.xml'
2024-03-27T10:41:48,210   adding 'moleculekit/share/pdb2pqr/residues/DA2.dat'
2024-03-27T10:41:48,212   adding 'moleculekit/share/pdb2pqr/residues/DA2.xml'
2024-03-27T10:41:48,213   adding 'moleculekit/share/pdb2pqr/residues/DAB.dat'
2024-03-27T10:41:48,215   adding 'moleculekit/share/pdb2pqr/residues/DAB.xml'
2024-03-27T10:41:48,216   adding 'moleculekit/share/pdb2pqr/residues/DAH.dat'
2024-03-27T10:41:48,217   adding 'moleculekit/share/pdb2pqr/residues/DAH.xml'
2024-03-27T10:41:48,219   adding 'moleculekit/share/pdb2pqr/residues/DPP.dat'
2024-03-27T10:41:48,220   adding 'moleculekit/share/pdb2pqr/residues/DPP.xml'
2024-03-27T10:41:48,222   adding 'moleculekit/share/pdb2pqr/residues/ESC.dat'
2024-03-27T10:41:48,223   adding 'moleculekit/share/pdb2pqr/residues/ESC.xml'
2024-03-27T10:41:48,225   adding 'moleculekit/share/pdb2pqr/residues/FGL.dat'
2024-03-27T10:41:48,226   adding 'moleculekit/share/pdb2pqr/residues/FGL.xml'
2024-03-27T10:41:48,228   adding 'moleculekit/share/pdb2pqr/residues/GHG.dat'
2024-03-27T10:41:48,229   adding 'moleculekit/share/pdb2pqr/residues/GHG.xml'
2024-03-27T10:41:48,230   adding 'moleculekit/share/pdb2pqr/residues/GME.dat'
2024-03-27T10:41:48,232   adding 'moleculekit/share/pdb2pqr/residues/GME.xml'
2024-03-27T10:41:48,234   adding 'moleculekit/share/pdb2pqr/residues/GNC.dat'
2024-03-27T10:41:48,235   adding 'moleculekit/share/pdb2pqr/residues/GNC.xml'
2024-03-27T10:41:48,236   adding 'moleculekit/share/pdb2pqr/residues/HHK.dat'
2024-03-27T10:41:48,238   adding 'moleculekit/share/pdb2pqr/residues/HHK.xml'
2024-03-27T10:41:48,239   adding 'moleculekit/share/pdb2pqr/residues/HLU.dat'
2024-03-27T10:41:48,241   adding 'moleculekit/share/pdb2pqr/residues/HLU.xml'
2024-03-27T10:41:48,242   adding 'moleculekit/share/pdb2pqr/residues/HLX.dat'
2024-03-27T10:41:48,244   adding 'moleculekit/share/pdb2pqr/residues/HLX.xml'
2024-03-27T10:41:48,245   adding 'moleculekit/share/pdb2pqr/residues/HOX.dat'
2024-03-27T10:41:48,246   adding 'moleculekit/share/pdb2pqr/residues/HOX.xml'
2024-03-27T10:41:48,247   adding 'moleculekit/share/pdb2pqr/residues/HPE.dat'
2024-03-27T10:41:48,249   adding 'moleculekit/share/pdb2pqr/residues/HPE.xml'
2024-03-27T10:41:48,250   adding 'moleculekit/share/pdb2pqr/residues/HQA.dat'
2024-03-27T10:41:48,251   adding 'moleculekit/share/pdb2pqr/residues/HQA.xml'
2024-03-27T10:41:48,252   adding 'moleculekit/share/pdb2pqr/residues/HTR.dat'
2024-03-27T10:41:48,254   adding 'moleculekit/share/pdb2pqr/residues/HTR.xml'
2024-03-27T10:41:48,255   adding 'moleculekit/share/pdb2pqr/residues/HYP.dat'
2024-03-27T10:41:48,256   adding 'moleculekit/share/pdb2pqr/residues/HYP.xml'
2024-03-27T10:41:48,257   adding 'moleculekit/share/pdb2pqr/residues/I2M.dat'
2024-03-27T10:41:48,259   adding 'moleculekit/share/pdb2pqr/residues/I2M.xml'
2024-03-27T10:41:48,260   adding 'moleculekit/share/pdb2pqr/residues/IGL.dat'
2024-03-27T10:41:48,261   adding 'moleculekit/share/pdb2pqr/residues/IGL.xml'
2024-03-27T10:41:48,263   adding 'moleculekit/share/pdb2pqr/residues/IIL.dat'
2024-03-27T10:41:48,264   adding 'moleculekit/share/pdb2pqr/residues/IIL.xml'
2024-03-27T10:41:48,265   adding 'moleculekit/share/pdb2pqr/residues/IML.dat'
2024-03-27T10:41:48,266   adding 'moleculekit/share/pdb2pqr/residues/IML.xml'
2024-03-27T10:41:48,268   adding 'moleculekit/share/pdb2pqr/residues/KYN.dat'
2024-03-27T10:41:48,269   adding 'moleculekit/share/pdb2pqr/residues/KYN.xml'
2024-03-27T10:41:48,270   adding 'moleculekit/share/pdb2pqr/residues/LME.dat'
2024-03-27T10:41:48,271   adding 'moleculekit/share/pdb2pqr/residues/LME.xml'
2024-03-27T10:41:48,273   adding 'moleculekit/share/pdb2pqr/residues/LMQ.dat'
2024-03-27T10:41:48,274   adding 'moleculekit/share/pdb2pqr/residues/LMQ.xml'
2024-03-27T10:41:48,275   adding 'moleculekit/share/pdb2pqr/residues/LYZ.dat'
2024-03-27T10:41:48,276   adding 'moleculekit/share/pdb2pqr/residues/LYZ.xml'
2024-03-27T10:41:48,278   adding 'moleculekit/share/pdb2pqr/residues/M3L.dat'
2024-03-27T10:41:48,279   adding 'moleculekit/share/pdb2pqr/residues/M3L.xml'
2024-03-27T10:41:48,280   adding 'moleculekit/share/pdb2pqr/residues/ME0.dat'
2024-03-27T10:41:48,282   adding 'moleculekit/share/pdb2pqr/residues/ME0.xml'
2024-03-27T10:41:48,283   adding 'moleculekit/share/pdb2pqr/residues/MEA.dat'
2024-03-27T10:41:48,284   adding 'moleculekit/share/pdb2pqr/residues/MEA.xml'
2024-03-27T10:41:48,285   adding 'moleculekit/share/pdb2pqr/residues/MEN.dat'
2024-03-27T10:41:48,286   adding 'moleculekit/share/pdb2pqr/residues/MEN.xml'
2024-03-27T10:41:48,288   adding 'moleculekit/share/pdb2pqr/residues/MEQ.dat'
2024-03-27T10:41:48,289   adding 'moleculekit/share/pdb2pqr/residues/MEQ.xml'
2024-03-27T10:41:48,290   adding 'moleculekit/share/pdb2pqr/residues/MLE.dat'
2024-03-27T10:41:48,291   adding 'moleculekit/share/pdb2pqr/residues/MLE.xml'
2024-03-27T10:41:48,293   adding 'moleculekit/share/pdb2pqr/residues/MLY.dat'
2024-03-27T10:41:48,294   adding 'moleculekit/share/pdb2pqr/residues/MLY.xml'
2024-03-27T10:41:48,295   adding 'moleculekit/share/pdb2pqr/residues/MLZ.dat'
2024-03-27T10:41:48,296   adding 'moleculekit/share/pdb2pqr/residues/MLZ.xml'
2024-03-27T10:41:48,298   adding 'moleculekit/share/pdb2pqr/residues/MME.dat'
2024-03-27T10:41:48,299   adding 'moleculekit/share/pdb2pqr/residues/MME.xml'
2024-03-27T10:41:48,300   adding 'moleculekit/share/pdb2pqr/residues/MMO.dat'
2024-03-27T10:41:48,301   adding 'moleculekit/share/pdb2pqr/residues/MMO.xml'
2024-03-27T10:41:48,303   adding 'moleculekit/share/pdb2pqr/residues/MVA.dat'
2024-03-27T10:41:48,304   adding 'moleculekit/share/pdb2pqr/residues/MVA.xml'
2024-03-27T10:41:48,306   adding 'moleculekit/share/pdb2pqr/residues/NAL.dat'
2024-03-27T10:41:48,307   adding 'moleculekit/share/pdb2pqr/residues/NAL.xml'
2024-03-27T10:41:48,308   adding 'moleculekit/share/pdb2pqr/residues/NCY.dat'
2024-03-27T10:41:48,309   adding 'moleculekit/share/pdb2pqr/residues/NCY.xml'
2024-03-27T10:41:48,311   adding 'moleculekit/share/pdb2pqr/residues/NLE.dat'
2024-03-27T10:41:48,312   adding 'moleculekit/share/pdb2pqr/residues/NLE.xml'
2024-03-27T10:41:48,313   adding 'moleculekit/share/pdb2pqr/residues/NVA.dat'
2024-03-27T10:41:48,314   adding 'moleculekit/share/pdb2pqr/residues/NVA.xml'
2024-03-27T10:41:48,316   adding 'moleculekit/share/pdb2pqr/residues/NZC.dat'
2024-03-27T10:41:48,317   adding 'moleculekit/share/pdb2pqr/residues/NZC.xml'
2024-03-27T10:41:48,318   adding 'moleculekit/share/pdb2pqr/residues/OCY.dat'
2024-03-27T10:41:48,320   adding 'moleculekit/share/pdb2pqr/residues/OCY.xml'
2024-03-27T10:41:48,321   adding 'moleculekit/share/pdb2pqr/residues/OMX.dat'
2024-03-27T10:41:48,322   adding 'moleculekit/share/pdb2pqr/residues/OMX.xml'
2024-03-27T10:41:48,323   adding 'moleculekit/share/pdb2pqr/residues/ONL.dat'
2024-03-27T10:41:48,324   adding 'moleculekit/share/pdb2pqr/residues/ONL.xml'
2024-03-27T10:41:48,326   adding 'moleculekit/share/pdb2pqr/residues/ORM.dat'
2024-03-27T10:41:48,331   adding 'moleculekit/share/pdb2pqr/residues/ORM.xml'
2024-03-27T10:41:48,332   adding 'moleculekit/share/pdb2pqr/residues/P1L.dat'
2024-03-27T10:41:48,333   adding 'moleculekit/share/pdb2pqr/residues/P1L.xml'
2024-03-27T10:41:48,335   adding 'moleculekit/share/pdb2pqr/residues/PCA.dat'
2024-03-27T10:41:48,336   adding 'moleculekit/share/pdb2pqr/residues/PCA.xml'
2024-03-27T10:41:48,337   adding 'moleculekit/share/pdb2pqr/residues/PRK.dat'
2024-03-27T10:41:48,338   adding 'moleculekit/share/pdb2pqr/residues/PRK.xml'
2024-03-27T10:41:48,340   adding 'moleculekit/share/pdb2pqr/residues/PTR.dat'
2024-03-27T10:41:48,341   adding 'moleculekit/share/pdb2pqr/residues/PTR.xml'
2024-03-27T10:41:48,342   adding 'moleculekit/share/pdb2pqr/residues/SEP.dat'
2024-03-27T10:41:48,343   adding 'moleculekit/share/pdb2pqr/residues/SEP.xml'
2024-03-27T10:41:48,344   adding 'moleculekit/share/pdb2pqr/residues/TPO.dat'
2024-03-27T10:41:48,346   adding 'moleculekit/share/pdb2pqr/residues/TPO.xml'
2024-03-27T10:41:48,347   adding 'moleculekit/share/pdb2pqr/residues/TRO.dat'
2024-03-27T10:41:48,348   adding 'moleculekit/share/pdb2pqr/residues/TRO.xml'
2024-03-27T10:41:48,349   adding 'moleculekit/share/pdb2pqr/residues/TY2.dat'
2024-03-27T10:41:48,351   adding 'moleculekit/share/pdb2pqr/residues/TY2.xml'
2024-03-27T10:41:48,352   adding 'moleculekit/share/pdb2pqr/residues/TYQ.dat'
2024-03-27T10:41:48,353   adding 'moleculekit/share/pdb2pqr/residues/TYQ.xml'
2024-03-27T10:41:48,355   adding 'moleculekit/share/pdb2pqr/residues/YCM.dat'
2024-03-27T10:41:48,356   adding 'moleculekit/share/pdb2pqr/residues/YCM.xml'
2024-03-27T10:41:48,357   adding 'moleculekit/share/pdb2pqr/residues/YNM.dat'
2024-03-27T10:41:48,359   adding 'moleculekit/share/pdb2pqr/residues/YNM.xml'
2024-03-27T10:41:48,360   adding 'moleculekit/smallmol/__init__.py'
2024-03-27T10:41:48,365   adding 'moleculekit/smallmol/smallmol.py'
2024-03-27T10:41:48,369   adding 'moleculekit/smallmol/smallmollib.py'
2024-03-27T10:41:48,371   adding 'moleculekit/smallmol/test_smallmol.py'
2024-03-27T10:41:48,372   adding 'moleculekit/smallmol/test_smallmollib.py'
2024-03-27T10:41:48,374   adding 'moleculekit/smallmol/util.py'
2024-03-27T10:41:48,376   adding 'moleculekit/smallmol/tools/__init__.py'
2024-03-27T10:41:48,378   adding 'moleculekit/smallmol/tools/clustering.py'
2024-03-27T10:41:48,380   adding 'moleculekit/smallmol/tools/restrainedembed.py'
2024-03-27T10:41:48,382   adding 'moleculekit/smallmol/tools/test_tools.py'
2024-03-27T10:41:48,473   adding 'moleculekit/tmalign/tmalign_util.cpp'
2024-03-27T10:41:48,481   adding 'moleculekit/tmalign/tmalign_util.pyx'
2024-03-27T10:41:48,483   adding 'moleculekit/tmalign/tmalignlib.pxd'
2024-03-27T10:41:48,486   adding 'moleculekit/tmalign/include/TMAlign.h'
2024-03-27T10:41:48,504   adding 'moleculekit/tmalign/src/TMAlign.cpp'
2024-03-27T10:41:48,507   adding 'moleculekit/tools/__init__.py'
2024-03-27T10:41:48,509   adding 'moleculekit/tools/atomtyper.py'
2024-03-27T10:41:48,511   adding 'moleculekit/tools/autosegment.py'
2024-03-27T10:41:48,513   adding 'moleculekit/tools/crystalpacking.py'
2024-03-27T10:41:48,517   adding 'moleculekit/tools/detect.py'
2024-03-27T10:41:48,519   adding 'moleculekit/tools/docking.py'
2024-03-27T10:41:48,521   adding 'moleculekit/tools/graphalignment.py'
2024-03-27T10:41:48,523   adding 'moleculekit/tools/hhblitsprofile.py'
2024-03-27T10:41:48,525   adding 'moleculekit/tools/modelling.py'
2024-03-27T10:41:48,526   adding 'moleculekit/tools/moleculechecks.py'
2024-03-27T10:41:48,537   adding 'moleculekit/tools/preparation.py'
2024-03-27T10:41:48,540   adding 'moleculekit/tools/preparation_customres.py'
2024-03-27T10:41:48,542   adding 'moleculekit/tools/sequencestructuralalignment.py'
2024-03-27T10:41:48,545   adding 'moleculekit/tools/voxeldescriptors.py'
2024-03-27T10:41:48,547   adding 'moleculekit/tools/obabel_tools/__init__.py'
2024-03-27T10:41:48,548   adding 'moleculekit/tools/obabel_tools/obabel_cli.py'
2024-03-27T10:41:48,641   adding 'moleculekit/wrapping/wrapping.cpp'
2024-03-27T10:41:48,650   adding 'moleculekit/wrapping/wrapping.pyx'
2024-03-27T10:41:48,652   adding 'moleculekit-1.8.28.dist-info/LICENSE'
2024-03-27T10:41:48,654   adding 'moleculekit-1.8.28.dist-info/METADATA'
2024-03-27T10:41:48,655   adding 'moleculekit-1.8.28.dist-info/WHEEL'
2024-03-27T10:41:48,656   adding 'moleculekit-1.8.28.dist-info/top_level.txt'
2024-03-27T10:41:48,661   adding 'moleculekit-1.8.28.dist-info/RECORD'
2024-03-27T10:41:48,841   removing build/bdist.linux-armv7l/wheel
2024-03-27T10:41:49,142   Building wheel for moleculekit (pyproject.toml): finished with status 'done'
2024-03-27T10:41:49,502   Created wheel for moleculekit: filename=moleculekit-1.8.28-cp39-cp39-linux_armv7l.whl size=14902099 sha256=04c1c3834e4447c5f50b16abf23b1e9f68e8e832712398c35671d844fbf2f35e
2024-03-27T10:41:49,504   Stored in directory: /tmp/pip-ephem-wheel-cache-tmrdawpw/wheels/6c/fc/bb/7505a735391231a34fcd23bcec3d6c53e6b86801106e203ba1
2024-03-27T10:41:49,540 Successfully built moleculekit
2024-03-27T10:41:50,005 Removed build tracker: '/tmp/pip-build-tracker-69q2maln'