2024-03-30T16:35:57,233 Created temporary directory: /tmp/pip-build-tracker-hbs2ykz_
2024-03-30T16:35:57,234 Initialized build tracking at /tmp/pip-build-tracker-hbs2ykz_
2024-03-30T16:35:57,235 Created build tracker: /tmp/pip-build-tracker-hbs2ykz_
2024-03-30T16:35:57,235 Entered build tracker: /tmp/pip-build-tracker-hbs2ykz_
2024-03-30T16:35:57,236 Created temporary directory: /tmp/pip-wheel-nd3fw5ct
2024-03-30T16:35:57,239 Created temporary directory: /tmp/pip-ephem-wheel-cache-1yrs6j9k
2024-03-30T16:35:57,261 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-03-30T16:35:57,264 2 location(s) to search for versions of biostoch:
2024-03-30T16:35:57,264 * https://pypi.org/simple/biostoch/
2024-03-30T16:35:57,264 * https://www.piwheels.org/simple/biostoch/
2024-03-30T16:35:57,265 Fetching project page and analyzing links: https://pypi.org/simple/biostoch/
2024-03-30T16:35:57,266 Getting page https://pypi.org/simple/biostoch/
2024-03-30T16:35:57,267 Found index url https://pypi.org/simple/
2024-03-30T16:35:57,477 Fetched page https://pypi.org/simple/biostoch/ as application/vnd.pypi.simple.v1+json
2024-03-30T16:35:57,480   Skipping link: No binaries permitted for biostoch: https://files.pythonhosted.org/packages/d4/6b/15f74c07205ef7d82d679617816430d3f08c0ac2349a12d0aec83a1af532/BioStoch-0.0.1-py3-none-any.whl (from https://pypi.org/simple/biostoch/)
2024-03-30T16:35:57,481   Found link https://files.pythonhosted.org/packages/bd/10/cccb1779898ee3fabe47b5c3873d41704f8eb0c2768248bbaa7519ae1ff4/BioStoch-0.0.1.tar.gz (from https://pypi.org/simple/biostoch/), version: 0.0.1
2024-03-30T16:35:57,481   Skipping link: No binaries permitted for biostoch: https://files.pythonhosted.org/packages/ca/8e/2cf3a1fed2f71feb387ee096212565f5c23db60d31a10d6fbab3738f616a/biostoch-0.0.2-py3-none-any.whl (from https://pypi.org/simple/biostoch/)
2024-03-30T16:35:57,482   Found link https://files.pythonhosted.org/packages/23/83/dc73d701e3210f6cc850b5da286e2a5ff4cba49e431d39b7be1687cd6646/biostoch-0.0.2.tar.gz (from https://pypi.org/simple/biostoch/), version: 0.0.2
2024-03-30T16:35:57,482   Skipping link: No binaries permitted for biostoch: https://files.pythonhosted.org/packages/23/29/b221e963dd5d9525e53c63a384ddb0d67fc83f6b9dc9f7e381793c0adf94/biostoch-0.0.3-py3-none-any.whl (from https://pypi.org/simple/biostoch/)
2024-03-30T16:35:57,483   Found link https://files.pythonhosted.org/packages/19/7f/9a4b0e60ff44dfaf136cd9f2ac443085070b0e4c456f21c0eb4857e294ad/biostoch-0.0.3.tar.gz (from https://pypi.org/simple/biostoch/), version: 0.0.3
2024-03-30T16:35:57,484   Skipping link: No binaries permitted for biostoch: https://files.pythonhosted.org/packages/d0/de/47248a42eebf0495defc69a8ee5502841bca9d00f7b06db875ab134aaae0/biostoch-0.0.4-py3-none-any.whl (from https://pypi.org/simple/biostoch/)
2024-03-30T16:35:57,484   Found link https://files.pythonhosted.org/packages/a8/ff/4c1484d48476bff0fb1ac63bd2422e00430655ea853bb3e6d0a2f3a250e4/biostoch-0.0.4.tar.gz (from https://pypi.org/simple/biostoch/), version: 0.0.4
2024-03-30T16:35:57,485   Skipping link: No binaries permitted for biostoch: https://files.pythonhosted.org/packages/0a/e6/b3edf6084c0903d83357a62f75a2f6c49a2fba0f34da1fb52933f71e77c0/biostoch-0.0.5-py3-none-any.whl (from https://pypi.org/simple/biostoch/)
2024-03-30T16:35:57,486   Found link https://files.pythonhosted.org/packages/43/19/ff63b4348ec5ca3af670bd1a7c9d45c202b66ab47b0866eb59aa0e657980/biostoch-0.0.5.tar.gz (from https://pypi.org/simple/biostoch/), version: 0.0.5
2024-03-30T16:35:57,486   Skipping link: No binaries permitted for biostoch: https://files.pythonhosted.org/packages/15/b1/8d8fbf8b2eebd2ec4355aaf0de72e23f463b5d5a97f178901152526ece17/biostoch-0.0.6-py3-none-any.whl (from https://pypi.org/simple/biostoch/)
2024-03-30T16:35:57,487   Found link https://files.pythonhosted.org/packages/a0/f8/415fd86fa67bcf6b88961a80a57c0d790cdef97a4220b9f93dc19cb6768e/biostoch-0.0.6.tar.gz (from https://pypi.org/simple/biostoch/), version: 0.0.6
2024-03-30T16:35:57,488 Fetching project page and analyzing links: https://www.piwheels.org/simple/biostoch/
2024-03-30T16:35:57,489 Getting page https://www.piwheels.org/simple/biostoch/
2024-03-30T16:35:57,490 Found index url https://www.piwheels.org/simple/
2024-03-30T16:35:58,021 Fetched page https://www.piwheels.org/simple/biostoch/ as text/html
2024-03-30T16:35:58,024   Skipping link: No binaries permitted for biostoch: https://www.piwheels.org/simple/biostoch/biostoch-0.0.5-py3-none-any.whl#sha256=33bcfb808db6254143dd49bd7c03f727892aae2dff2290faccf02b2469c41383 (from https://www.piwheels.org/simple/biostoch/)
2024-03-30T16:35:58,025   Skipping link: No binaries permitted for biostoch: https://www.piwheels.org/simple/biostoch/biostoch-0.0.4-py3-none-any.whl#sha256=afb95586d36dd9af701d5f9bc99adc8fb07684349210596c87767589d3e08a19 (from https://www.piwheels.org/simple/biostoch/)
2024-03-30T16:35:58,025   Skipping link: No binaries permitted for biostoch: https://www.piwheels.org/simple/biostoch/biostoch-0.0.3-py3-none-any.whl#sha256=3b189b2f50991a63ec94dbcc0f89c93ede46de90a2c169bc4b7d28b6ef39a75a (from https://www.piwheels.org/simple/biostoch/)
2024-03-30T16:35:58,026   Skipping link: No binaries permitted for biostoch: https://www.piwheels.org/simple/biostoch/biostoch-0.0.2-py3-none-any.whl#sha256=a9f33a40949a911088beab084697ddcda74a7f7d49d10d928d06d37eff16ceb4 (from https://www.piwheels.org/simple/biostoch/)
2024-03-30T16:35:58,026   Skipping link: No binaries permitted for biostoch: https://www.piwheels.org/simple/biostoch/BioStoch-0.0.1-py3-none-any.whl#sha256=98495e596ff47e9cc21925b3db289743a32259b0ab02fd6f49dce2593b70a2c2 (from https://www.piwheels.org/simple/biostoch/)
2024-03-30T16:35:58,027 Skipping link: not a file: https://www.piwheels.org/simple/biostoch/
2024-03-30T16:35:58,028 Skipping link: not a file: https://pypi.org/simple/biostoch/
2024-03-30T16:35:58,046 Given no hashes to check 1 links for project 'biostoch': discarding no candidates
2024-03-30T16:35:58,064 Collecting biostoch==0.0.6
2024-03-30T16:35:58,067   Created temporary directory: /tmp/pip-unpack-f2kn52e9
2024-03-30T16:35:58,284   Downloading biostoch-0.0.6.tar.gz (13 kB)
2024-03-30T16:35:58,328   Added biostoch==0.0.6 from https://files.pythonhosted.org/packages/a0/f8/415fd86fa67bcf6b88961a80a57c0d790cdef97a4220b9f93dc19cb6768e/biostoch-0.0.6.tar.gz to build tracker '/tmp/pip-build-tracker-hbs2ykz_'
2024-03-30T16:35:58,329   Running setup.py (path:/tmp/pip-wheel-nd3fw5ct/biostoch_1feeb94701644186af437dfdd3905f8a/setup.py) egg_info for package biostoch
2024-03-30T16:35:58,330   Created temporary directory: /tmp/pip-pip-egg-info-546wiydi
2024-03-30T16:35:58,331   Preparing metadata (setup.py): started
2024-03-30T16:35:58,332   Running command python setup.py egg_info
2024-03-30T16:35:59,385   running egg_info
2024-03-30T16:35:59,387   creating /tmp/pip-pip-egg-info-546wiydi/biostoch.egg-info
2024-03-30T16:35:59,411   writing /tmp/pip-pip-egg-info-546wiydi/biostoch.egg-info/PKG-INFO
2024-03-30T16:35:59,414   writing dependency_links to /tmp/pip-pip-egg-info-546wiydi/biostoch.egg-info/dependency_links.txt
2024-03-30T16:35:59,416   writing requirements to /tmp/pip-pip-egg-info-546wiydi/biostoch.egg-info/requires.txt
2024-03-30T16:35:59,417   writing top-level names to /tmp/pip-pip-egg-info-546wiydi/biostoch.egg-info/top_level.txt
2024-03-30T16:35:59,419   writing manifest file '/tmp/pip-pip-egg-info-546wiydi/biostoch.egg-info/SOURCES.txt'
2024-03-30T16:35:59,494   reading manifest file '/tmp/pip-pip-egg-info-546wiydi/biostoch.egg-info/SOURCES.txt'
2024-03-30T16:35:59,496   reading manifest template 'MANIFEST.in'
2024-03-30T16:35:59,500   adding license file 'LICENSE'
2024-03-30T16:35:59,502   writing manifest file '/tmp/pip-pip-egg-info-546wiydi/biostoch.egg-info/SOURCES.txt'
2024-03-30T16:35:59,609   Preparing metadata (setup.py): finished with status 'done'
2024-03-30T16:35:59,613   Source in /tmp/pip-wheel-nd3fw5ct/biostoch_1feeb94701644186af437dfdd3905f8a has version 0.0.6, which satisfies requirement biostoch==0.0.6 from https://files.pythonhosted.org/packages/a0/f8/415fd86fa67bcf6b88961a80a57c0d790cdef97a4220b9f93dc19cb6768e/biostoch-0.0.6.tar.gz
2024-03-30T16:35:59,614   Removed biostoch==0.0.6 from https://files.pythonhosted.org/packages/a0/f8/415fd86fa67bcf6b88961a80a57c0d790cdef97a4220b9f93dc19cb6768e/biostoch-0.0.6.tar.gz from build tracker '/tmp/pip-build-tracker-hbs2ykz_'
2024-03-30T16:35:59,619 Created temporary directory: /tmp/pip-unpack-6p_3eva9
2024-03-30T16:35:59,620 Created temporary directory: /tmp/pip-unpack-c7a88fux
2024-03-30T16:35:59,625 Building wheels for collected packages: biostoch
2024-03-30T16:35:59,629   Created temporary directory: /tmp/pip-wheel-ex3e2e0i
2024-03-30T16:35:59,630   Building wheel for biostoch (setup.py): started
2024-03-30T16:35:59,631   Destination directory: /tmp/pip-wheel-ex3e2e0i
2024-03-30T16:35:59,631   Running command python setup.py bdist_wheel
2024-03-30T16:36:00,634   running bdist_wheel
2024-03-30T16:36:00,728   running build
2024-03-30T16:36:00,729   running build_py
2024-03-30T16:36:00,755   creating build
2024-03-30T16:36:00,756   creating build/lib
2024-03-30T16:36:00,757   creating build/lib/biostoch
2024-03-30T16:36:00,758   copying biostoch/tau_leaping.py -> build/lib/biostoch
2024-03-30T16:36:00,760   copying biostoch/model.py -> build/lib/biostoch
2024-03-30T16:36:00,762   copying biostoch/ssa.py -> build/lib/biostoch
2024-03-30T16:36:00,764   copying biostoch/visualization.py -> build/lib/biostoch
2024-03-30T16:36:00,767   copying biostoch/__init__.py -> build/lib/biostoch
2024-03-30T16:36:00,768   copying biostoch/cle.py -> build/lib/biostoch
2024-03-30T16:36:00,771   copying biostoch/__main__.py -> build/lib/biostoch
2024-03-30T16:36:00,772   copying biostoch/ode.py -> build/lib/biostoch
2024-03-30T16:36:00,774   running egg_info
2024-03-30T16:36:00,830   writing biostoch.egg-info/PKG-INFO
2024-03-30T16:36:00,833   writing dependency_links to biostoch.egg-info/dependency_links.txt
2024-03-30T16:36:00,835   writing requirements to biostoch.egg-info/requires.txt
2024-03-30T16:36:00,836   writing top-level names to biostoch.egg-info/top_level.txt
2024-03-30T16:36:00,863   reading manifest file 'biostoch.egg-info/SOURCES.txt'
2024-03-30T16:36:00,864   reading manifest template 'MANIFEST.in'
2024-03-30T16:36:00,870   adding license file 'LICENSE'
2024-03-30T16:36:00,872   writing manifest file 'biostoch.egg-info/SOURCES.txt'
2024-03-30T16:36:00,899   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2024-03-30T16:36:00,900   !!

2024-03-30T16:36:00,901           ********************************************************************************
2024-03-30T16:36:00,901           Please avoid running ``setup.py`` directly.
2024-03-30T16:36:00,902           Instead, use pypa/build, pypa/installer or other
2024-03-30T16:36:00,903           standards-based tools.

2024-03-30T16:36:00,904           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2024-03-30T16:36:00,904           ********************************************************************************

2024-03-30T16:36:00,905   !!
2024-03-30T16:36:00,906     self.initialize_options()
2024-03-30T16:36:00,924   installing to build/bdist.linux-armv7l/wheel
2024-03-30T16:36:00,925   running install
2024-03-30T16:36:00,949   running install_lib
2024-03-30T16:36:00,973   creating build/bdist.linux-armv7l
2024-03-30T16:36:00,973   creating build/bdist.linux-armv7l/wheel
2024-03-30T16:36:00,975   creating build/bdist.linux-armv7l/wheel/biostoch
2024-03-30T16:36:00,976   copying build/lib/biostoch/tau_leaping.py -> build/bdist.linux-armv7l/wheel/biostoch
2024-03-30T16:36:00,978   copying build/lib/biostoch/model.py -> build/bdist.linux-armv7l/wheel/biostoch
2024-03-30T16:36:00,981   copying build/lib/biostoch/ssa.py -> build/bdist.linux-armv7l/wheel/biostoch
2024-03-30T16:36:00,983   copying build/lib/biostoch/visualization.py -> build/bdist.linux-armv7l/wheel/biostoch
2024-03-30T16:36:00,985   copying build/lib/biostoch/__init__.py -> build/bdist.linux-armv7l/wheel/biostoch
2024-03-30T16:36:00,987   copying build/lib/biostoch/cle.py -> build/bdist.linux-armv7l/wheel/biostoch
2024-03-30T16:36:00,990   copying build/lib/biostoch/__main__.py -> build/bdist.linux-armv7l/wheel/biostoch
2024-03-30T16:36:00,991   copying build/lib/biostoch/ode.py -> build/bdist.linux-armv7l/wheel/biostoch
2024-03-30T16:36:00,993   running install_egg_info
2024-03-30T16:36:01,023   Copying biostoch.egg-info to build/bdist.linux-armv7l/wheel/biostoch-0.0.6-py3.11.egg-info
2024-03-30T16:36:01,033   running install_scripts
2024-03-30T16:36:01,047   creating build/bdist.linux-armv7l/wheel/biostoch-0.0.6.dist-info/WHEEL
2024-03-30T16:36:01,049   creating '/tmp/pip-wheel-ex3e2e0i/biostoch-0.0.6-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-03-30T16:36:01,051   adding 'biostoch/__init__.py'
2024-03-30T16:36:01,053   adding 'biostoch/__main__.py'
2024-03-30T16:36:01,054   adding 'biostoch/cle.py'
2024-03-30T16:36:01,056   adding 'biostoch/model.py'
2024-03-30T16:36:01,058   adding 'biostoch/ode.py'
2024-03-30T16:36:01,060   adding 'biostoch/ssa.py'
2024-03-30T16:36:01,062   adding 'biostoch/tau_leaping.py'
2024-03-30T16:36:01,063   adding 'biostoch/visualization.py'
2024-03-30T16:36:01,065   adding 'biostoch-0.0.6.dist-info/LICENSE'
2024-03-30T16:36:01,067   adding 'biostoch-0.0.6.dist-info/METADATA'
2024-03-30T16:36:01,068   adding 'biostoch-0.0.6.dist-info/WHEEL'
2024-03-30T16:36:01,068   adding 'biostoch-0.0.6.dist-info/top_level.txt'
2024-03-30T16:36:01,069   adding 'biostoch-0.0.6.dist-info/RECORD'
2024-03-30T16:36:01,071   removing build/bdist.linux-armv7l/wheel
2024-03-30T16:36:01,184   Building wheel for biostoch (setup.py): finished with status 'done'
2024-03-30T16:36:01,187   Created wheel for biostoch: filename=biostoch-0.0.6-py3-none-any.whl size=16995 sha256=9cc9a0a414ff4054d93ec0fe46ca7e21ee8c1b15f0bfb4ac428c53eb579a109b
2024-03-30T16:36:01,188   Stored in directory: /tmp/pip-ephem-wheel-cache-1yrs6j9k/wheels/4a/e6/cd/01b5ec7c45bf3a51fe37f95d8d275245b93ffb72e07ef433b0
2024-03-30T16:36:01,198 Successfully built biostoch
2024-03-30T16:36:01,202 Removed build tracker: '/tmp/pip-build-tracker-hbs2ykz_'