2024-04-02T06:12:50,760 Created temporary directory: /tmp/pip-build-tracker-cr1muqpt 2024-04-02T06:12:50,762 Initialized build tracking at /tmp/pip-build-tracker-cr1muqpt 2024-04-02T06:12:50,762 Created build tracker: /tmp/pip-build-tracker-cr1muqpt 2024-04-02T06:12:50,763 Entered build tracker: /tmp/pip-build-tracker-cr1muqpt 2024-04-02T06:12:50,763 Created temporary directory: /tmp/pip-wheel-csv_vwix 2024-04-02T06:12:50,766 Created temporary directory: /tmp/pip-ephem-wheel-cache-dm98dcj4 2024-04-02T06:12:50,789 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-04-02T06:12:50,793 2 location(s) to search for versions of tangermeme: 2024-04-02T06:12:50,793 * https://pypi.org/simple/tangermeme/ 2024-04-02T06:12:50,793 * https://www.piwheels.org/simple/tangermeme/ 2024-04-02T06:12:50,794 Fetching project page and analyzing links: https://pypi.org/simple/tangermeme/ 2024-04-02T06:12:50,794 Getting page https://pypi.org/simple/tangermeme/ 2024-04-02T06:12:50,796 Found index url https://pypi.org/simple/ 2024-04-02T06:12:51,043 Fetched page https://pypi.org/simple/tangermeme/ as application/vnd.pypi.simple.v1+json 2024-04-02T06:12:51,046 Skipping link: No binaries permitted for tangermeme: https://files.pythonhosted.org/packages/a9/e0/853e8caeb0d5f4b8fc911ef2757748fff62b26f2ca856819f98d89fd6b5d/tangermeme-0.0.1-py3-none-any.whl (from https://pypi.org/simple/tangermeme/) 2024-04-02T06:12:51,046 Found link https://files.pythonhosted.org/packages/61/41/c9434c381d7fea99951710f47cc3751dcb10002c90cfaf60d3187b7e6665/tangermeme-0.0.1.tar.gz (from https://pypi.org/simple/tangermeme/), version: 0.0.1 2024-04-02T06:12:51,047 Skipping link: No binaries permitted for tangermeme: https://files.pythonhosted.org/packages/8f/21/8567311fe56325b390a914dc5d41efd9646e2277857d10c50338c740a7ce/tangermeme-0.1.0rc0-py3-none-any.whl (from https://pypi.org/simple/tangermeme/) 2024-04-02T06:12:51,047 Found link https://files.pythonhosted.org/packages/05/7a/373121f7e2cdb51984d1c0c24ea4ed2d9328846e863ad517ed07ead9a88f/tangermeme-0.1.0rc0.tar.gz (from https://pypi.org/simple/tangermeme/), version: 0.1.0rc0 2024-04-02T06:12:51,048 Skipping link: No binaries permitted for tangermeme: https://files.pythonhosted.org/packages/7f/5a/9a9b74932c857fce18dfdeea136beccd406a29bd7d8c4b31ed26db4cde32/tangermeme-0.1.0-py3-none-any.whl (from https://pypi.org/simple/tangermeme/) 2024-04-02T06:12:51,049 Found link https://files.pythonhosted.org/packages/9f/f1/5253f9a39e1835bd6dc7ef5adc3c32cbb825b3ef47b84edc8caeee500edb/tangermeme-0.1.0.tar.gz (from https://pypi.org/simple/tangermeme/), version: 0.1.0 2024-04-02T06:12:51,050 Fetching project page and analyzing links: https://www.piwheels.org/simple/tangermeme/ 2024-04-02T06:12:51,050 Getting page https://www.piwheels.org/simple/tangermeme/ 2024-04-02T06:12:51,052 Found index url https://www.piwheels.org/simple/ 2024-04-02T06:12:51,475 Fetched page https://www.piwheels.org/simple/tangermeme/ as text/html 2024-04-02T06:12:51,477 Skipping link: No binaries permitted for tangermeme: https://www.piwheels.org/simple/tangermeme/tangermeme-0.1.0rc0-py3-none-any.whl#sha256=e6dad2c5e1551460aff817aa6a1fd7d8b62976244d57b6219301623bb3b0f7bb (from https://www.piwheels.org/simple/tangermeme/) 2024-04-02T06:12:51,477 Skipping link: No binaries permitted for tangermeme: https://www.piwheels.org/simple/tangermeme/tangermeme-0.0.1-py3-none-any.whl#sha256=623e295dad1d60f7e2d1b6a311127178008994cb6b727cfc2fb7c7bf2511c18b (from https://www.piwheels.org/simple/tangermeme/) 2024-04-02T06:12:51,478 Skipping link: not a file: https://www.piwheels.org/simple/tangermeme/ 2024-04-02T06:12:51,479 Skipping link: not a file: https://pypi.org/simple/tangermeme/ 2024-04-02T06:12:51,497 Given no hashes to check 1 links for project 'tangermeme': discarding no candidates 2024-04-02T06:12:51,515 Collecting tangermeme==0.1.0 2024-04-02T06:12:51,518 Created temporary directory: /tmp/pip-unpack-p4ih5dlr 2024-04-02T06:12:51,734 Downloading tangermeme-0.1.0.tar.gz (60 kB) 2024-04-02T06:12:51,930 Added tangermeme==0.1.0 from https://files.pythonhosted.org/packages/9f/f1/5253f9a39e1835bd6dc7ef5adc3c32cbb825b3ef47b84edc8caeee500edb/tangermeme-0.1.0.tar.gz to build tracker '/tmp/pip-build-tracker-cr1muqpt' 2024-04-02T06:12:51,931 Running setup.py (path:/tmp/pip-wheel-csv_vwix/tangermeme_bc01b981c0d5459a827747c7e4b15d07/setup.py) egg_info for package tangermeme 2024-04-02T06:12:51,932 Created temporary directory: /tmp/pip-pip-egg-info-ccor5_y0 2024-04-02T06:12:51,933 Preparing metadata (setup.py): started 2024-04-02T06:12:51,934 Running command python setup.py egg_info 2024-04-02T06:12:53,005 running egg_info 2024-04-02T06:12:53,006 creating /tmp/pip-pip-egg-info-ccor5_y0/tangermeme.egg-info 2024-04-02T06:12:53,251 writing /tmp/pip-pip-egg-info-ccor5_y0/tangermeme.egg-info/PKG-INFO 2024-04-02T06:12:53,254 writing dependency_links to /tmp/pip-pip-egg-info-ccor5_y0/tangermeme.egg-info/dependency_links.txt 2024-04-02T06:12:53,257 writing requirements to /tmp/pip-pip-egg-info-ccor5_y0/tangermeme.egg-info/requires.txt 2024-04-02T06:12:53,258 writing top-level names to /tmp/pip-pip-egg-info-ccor5_y0/tangermeme.egg-info/top_level.txt 2024-04-02T06:12:53,260 writing manifest file '/tmp/pip-pip-egg-info-ccor5_y0/tangermeme.egg-info/SOURCES.txt' 2024-04-02T06:12:53,344 reading manifest file '/tmp/pip-pip-egg-info-ccor5_y0/tangermeme.egg-info/SOURCES.txt' 2024-04-02T06:12:53,345 adding license file 'LICENSE' 2024-04-02T06:12:53,348 writing manifest file '/tmp/pip-pip-egg-info-ccor5_y0/tangermeme.egg-info/SOURCES.txt' 2024-04-02T06:12:53,455 Preparing metadata (setup.py): finished with status 'done' 2024-04-02T06:12:53,459 Source in /tmp/pip-wheel-csv_vwix/tangermeme_bc01b981c0d5459a827747c7e4b15d07 has version 0.1.0, which satisfies requirement tangermeme==0.1.0 from https://files.pythonhosted.org/packages/9f/f1/5253f9a39e1835bd6dc7ef5adc3c32cbb825b3ef47b84edc8caeee500edb/tangermeme-0.1.0.tar.gz 2024-04-02T06:12:53,460 Removed tangermeme==0.1.0 from https://files.pythonhosted.org/packages/9f/f1/5253f9a39e1835bd6dc7ef5adc3c32cbb825b3ef47b84edc8caeee500edb/tangermeme-0.1.0.tar.gz from build tracker '/tmp/pip-build-tracker-cr1muqpt' 2024-04-02T06:12:53,464 Created temporary directory: /tmp/pip-unpack-10tz0oe5 2024-04-02T06:12:53,465 Created temporary directory: /tmp/pip-unpack-xji4wp8o 2024-04-02T06:12:53,479 Building wheels for collected packages: tangermeme 2024-04-02T06:12:53,484 Created temporary directory: /tmp/pip-wheel-5a5uou06 2024-04-02T06:12:53,485 Building wheel for tangermeme (setup.py): started 2024-04-02T06:12:53,486 Destination directory: /tmp/pip-wheel-5a5uou06 2024-04-02T06:12:53,487 Running command python setup.py bdist_wheel 2024-04-02T06:12:54,524 running bdist_wheel 2024-04-02T06:12:54,622 running build 2024-04-02T06:12:54,622 running build_py 2024-04-02T06:12:54,650 creating build 2024-04-02T06:12:54,650 creating build/lib 2024-04-02T06:12:54,651 creating build/lib/tangermeme 2024-04-02T06:12:54,653 copying tangermeme/variant_effect.py -> build/lib/tangermeme 2024-04-02T06:12:54,656 copying tangermeme/space.py -> build/lib/tangermeme 2024-04-02T06:12:54,658 copying tangermeme/plot.py -> build/lib/tangermeme 2024-04-02T06:12:54,660 copying tangermeme/io.py -> build/lib/tangermeme 2024-04-02T06:12:54,663 copying tangermeme/__init__.py -> build/lib/tangermeme 2024-04-02T06:12:54,665 copying tangermeme/utils.py -> build/lib/tangermeme 2024-04-02T06:12:54,667 copying tangermeme/ism.py -> build/lib/tangermeme 2024-04-02T06:12:54,669 copying tangermeme/design.py -> build/lib/tangermeme 2024-04-02T06:12:54,672 copying tangermeme/ablate.py -> build/lib/tangermeme 2024-04-02T06:12:54,674 copying tangermeme/marginalize.py -> build/lib/tangermeme 2024-04-02T06:12:54,676 copying tangermeme/predict.py -> build/lib/tangermeme 2024-04-02T06:12:54,678 copying tangermeme/kmers.py -> build/lib/tangermeme 2024-04-02T06:12:54,680 copying tangermeme/product.py -> build/lib/tangermeme 2024-04-02T06:12:54,682 copying tangermeme/ersatz.py -> build/lib/tangermeme 2024-04-02T06:12:54,685 copying tangermeme/match.py -> build/lib/tangermeme 2024-04-02T06:12:54,689 creating build/lib/tangermeme/tools 2024-04-02T06:12:54,690 copying tangermeme/tools/__init__.py -> build/lib/tangermeme/tools 2024-04-02T06:12:54,692 copying tangermeme/tools/fimo.py -> build/lib/tangermeme/tools 2024-04-02T06:12:54,695 copying tangermeme/tools/tomtom.py -> build/lib/tangermeme/tools 2024-04-02T06:12:54,727 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-04-02T06:12:54,727 !! 2024-04-02T06:12:54,728 ******************************************************************************** 2024-04-02T06:12:54,729 Please avoid running ``setup.py`` directly. 2024-04-02T06:12:54,729 Instead, use pypa/build, pypa/installer or other 2024-04-02T06:12:54,730 standards-based tools. 2024-04-02T06:12:54,731 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-04-02T06:12:54,731 ******************************************************************************** 2024-04-02T06:12:54,732 !! 2024-04-02T06:12:54,733 self.initialize_options() 2024-04-02T06:12:54,752 installing to build/bdist.linux-armv7l/wheel 2024-04-02T06:12:54,753 running install 2024-04-02T06:12:54,776 running install_lib 2024-04-02T06:12:54,802 creating build/bdist.linux-armv7l 2024-04-02T06:12:54,802 creating build/bdist.linux-armv7l/wheel 2024-04-02T06:12:54,804 creating build/bdist.linux-armv7l/wheel/tangermeme 2024-04-02T06:12:54,806 creating build/bdist.linux-armv7l/wheel/tangermeme/tools 2024-04-02T06:12:54,807 copying build/lib/tangermeme/tools/__init__.py -> build/bdist.linux-armv7l/wheel/tangermeme/tools 2024-04-02T06:12:54,809 copying build/lib/tangermeme/tools/fimo.py -> build/bdist.linux-armv7l/wheel/tangermeme/tools 2024-04-02T06:12:54,812 copying build/lib/tangermeme/tools/tomtom.py -> build/bdist.linux-armv7l/wheel/tangermeme/tools 2024-04-02T06:12:54,814 copying build/lib/tangermeme/variant_effect.py -> build/bdist.linux-armv7l/wheel/tangermeme 2024-04-02T06:12:54,816 copying build/lib/tangermeme/space.py -> build/bdist.linux-armv7l/wheel/tangermeme 2024-04-02T06:12:54,819 copying build/lib/tangermeme/plot.py -> build/bdist.linux-armv7l/wheel/tangermeme 2024-04-02T06:12:54,822 copying build/lib/tangermeme/io.py -> build/bdist.linux-armv7l/wheel/tangermeme 2024-04-02T06:12:54,825 copying build/lib/tangermeme/__init__.py -> build/bdist.linux-armv7l/wheel/tangermeme 2024-04-02T06:12:54,826 copying build/lib/tangermeme/utils.py -> build/bdist.linux-armv7l/wheel/tangermeme 2024-04-02T06:12:54,829 copying build/lib/tangermeme/ism.py -> build/bdist.linux-armv7l/wheel/tangermeme 2024-04-02T06:12:54,831 copying build/lib/tangermeme/design.py -> build/bdist.linux-armv7l/wheel/tangermeme 2024-04-02T06:12:54,834 copying build/lib/tangermeme/ablate.py -> build/bdist.linux-armv7l/wheel/tangermeme 2024-04-02T06:12:54,836 copying build/lib/tangermeme/marginalize.py -> build/bdist.linux-armv7l/wheel/tangermeme 2024-04-02T06:12:54,838 copying build/lib/tangermeme/predict.py -> build/bdist.linux-armv7l/wheel/tangermeme 2024-04-02T06:12:54,840 copying build/lib/tangermeme/kmers.py -> build/bdist.linux-armv7l/wheel/tangermeme 2024-04-02T06:12:54,842 copying build/lib/tangermeme/product.py -> build/bdist.linux-armv7l/wheel/tangermeme 2024-04-02T06:12:54,845 copying build/lib/tangermeme/ersatz.py -> build/bdist.linux-armv7l/wheel/tangermeme 2024-04-02T06:12:54,848 copying build/lib/tangermeme/match.py -> build/bdist.linux-armv7l/wheel/tangermeme 2024-04-02T06:12:54,850 running install_egg_info 2024-04-02T06:12:54,913 running egg_info 2024-04-02T06:12:54,938 writing tangermeme.egg-info/PKG-INFO 2024-04-02T06:12:54,941 writing dependency_links to tangermeme.egg-info/dependency_links.txt 2024-04-02T06:12:54,943 writing requirements to tangermeme.egg-info/requires.txt 2024-04-02T06:12:54,944 writing top-level names to tangermeme.egg-info/top_level.txt 2024-04-02T06:12:54,973 reading manifest file 'tangermeme.egg-info/SOURCES.txt' 2024-04-02T06:12:54,976 adding license file 'LICENSE' 2024-04-02T06:12:54,978 writing manifest file 'tangermeme.egg-info/SOURCES.txt' 2024-04-02T06:12:54,980 Copying tangermeme.egg-info to build/bdist.linux-armv7l/wheel/tangermeme-0.1.0-py3.11.egg-info 2024-04-02T06:12:54,990 running install_scripts 2024-04-02T06:12:55,005 creating build/bdist.linux-armv7l/wheel/tangermeme-0.1.0.dist-info/WHEEL 2024-04-02T06:12:55,008 creating '/tmp/pip-wheel-5a5uou06/tangermeme-0.1.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-04-02T06:12:55,011 adding 'tangermeme/__init__.py' 2024-04-02T06:12:55,012 adding 'tangermeme/ablate.py' 2024-04-02T06:12:55,014 adding 'tangermeme/design.py' 2024-04-02T06:12:55,017 adding 'tangermeme/ersatz.py' 2024-04-02T06:12:55,020 adding 'tangermeme/io.py' 2024-04-02T06:12:55,021 adding 'tangermeme/ism.py' 2024-04-02T06:12:55,023 adding 'tangermeme/kmers.py' 2024-04-02T06:12:55,024 adding 'tangermeme/marginalize.py' 2024-04-02T06:12:55,027 adding 'tangermeme/match.py' 2024-04-02T06:12:55,028 adding 'tangermeme/plot.py' 2024-04-02T06:12:55,030 adding 'tangermeme/predict.py' 2024-04-02T06:12:55,031 adding 'tangermeme/product.py' 2024-04-02T06:12:55,033 adding 'tangermeme/space.py' 2024-04-02T06:12:55,035 adding 'tangermeme/utils.py' 2024-04-02T06:12:55,036 adding 'tangermeme/variant_effect.py' 2024-04-02T06:12:55,038 adding 'tangermeme/tools/__init__.py' 2024-04-02T06:12:55,040 adding 'tangermeme/tools/fimo.py' 2024-04-02T06:12:55,041 adding 'tangermeme/tools/tomtom.py' 2024-04-02T06:12:55,043 adding 'tangermeme-0.1.0.dist-info/LICENSE' 2024-04-02T06:12:55,044 adding 'tangermeme-0.1.0.dist-info/METADATA' 2024-04-02T06:12:55,046 adding 'tangermeme-0.1.0.dist-info/WHEEL' 2024-04-02T06:12:55,046 adding 'tangermeme-0.1.0.dist-info/top_level.txt' 2024-04-02T06:12:55,047 adding 'tangermeme-0.1.0.dist-info/RECORD' 2024-04-02T06:12:55,050 removing build/bdist.linux-armv7l/wheel 2024-04-02T06:12:55,167 Building wheel for tangermeme (setup.py): finished with status 'done' 2024-04-02T06:12:55,170 Created wheel for tangermeme: filename=tangermeme-0.1.0-py3-none-any.whl size=44759 sha256=6c23d1bf94f5b24ed50311d61ddb1e4c49b9ba9d5e9bb8a22c4679df9711b983 2024-04-02T06:12:55,171 Stored in directory: /tmp/pip-ephem-wheel-cache-dm98dcj4/wheels/8d/46/40/54a3a17ea36aa03d8b70110530b7443944d710ee877b0293e8 2024-04-02T06:12:55,181 Successfully built tangermeme 2024-04-02T06:12:55,186 Removed build tracker: '/tmp/pip-build-tracker-cr1muqpt'