2024-04-02T13:48:15,784 Created temporary directory: /tmp/pip-build-tracker-hbynyj_p 2024-04-02T13:48:15,786 Initialized build tracking at /tmp/pip-build-tracker-hbynyj_p 2024-04-02T13:48:15,787 Created build tracker: /tmp/pip-build-tracker-hbynyj_p 2024-04-02T13:48:15,787 Entered build tracker: /tmp/pip-build-tracker-hbynyj_p 2024-04-02T13:48:15,788 Created temporary directory: /tmp/pip-wheel-b4_xzg23 2024-04-02T13:48:15,792 Created temporary directory: /tmp/pip-ephem-wheel-cache-4r39sey0 2024-04-02T13:48:15,819 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-04-02T13:48:15,822 2 location(s) to search for versions of biomero: 2024-04-02T13:48:15,822 * https://pypi.org/simple/biomero/ 2024-04-02T13:48:15,822 * https://www.piwheels.org/simple/biomero/ 2024-04-02T13:48:15,823 Fetching project page and analyzing links: https://pypi.org/simple/biomero/ 2024-04-02T13:48:15,824 Getting page https://pypi.org/simple/biomero/ 2024-04-02T13:48:15,825 Found index url https://pypi.org/simple/ 2024-04-02T13:48:16,042 Fetched page https://pypi.org/simple/biomero/ as application/vnd.pypi.simple.v1+json 2024-04-02T13:48:16,045 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/62/48/c77a7d502ed23e824988527ffe744d77ec3692bf373f5dffb6406149f55e/biomero-1.2.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-04-02T13:48:16,046 Found link https://files.pythonhosted.org/packages/37/4b/4934e30b8ac7f859e20ce2f33ebb9d9de0c2611fd419587e840b457da994/biomero-1.2.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.2.0 2024-04-02T13:48:16,047 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/ba/59/df01007bae6d10f7a894eb8f067b19a6fc1c85cef3621532c552c8a5d83c/biomero-1.3.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-04-02T13:48:16,048 Found link https://files.pythonhosted.org/packages/93/66/6f3ba130c6ab15b10a0fc92683db7f8a6d0a60df0c00311f3011d8801db2/biomero-1.3.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.3.0 2024-04-02T13:48:16,049 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/97/35/d6b2ca0b76deaab237094daa9fb4b6c86df67ef59f07510c101082235d8d/biomero-1.4.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-04-02T13:48:16,050 Found link https://files.pythonhosted.org/packages/72/2d/612e4f8aedcfd6a0aca21b7896a9ca74e18fdbc382538f411fbe4e403fe4/biomero-1.4.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.4.0 2024-04-02T13:48:16,051 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/f2/2a/58f8f3897d6bfffb13375cb3f67dc4776773852b6cb89c00b45317a93854/biomero-1.5.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-04-02T13:48:16,052 Found link https://files.pythonhosted.org/packages/22/5d/beb526e718ea20582a7a10ef277d10f2907723f2dd0bf57465a8f406f27e/biomero-1.5.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.5.0 2024-04-02T13:48:16,052 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/03/8f/4f9506b39fa51bf565e2354dc887ec53ede58150a86a18b92f6bfd8c72a8/biomero-1.5.1-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-04-02T13:48:16,053 Found link https://files.pythonhosted.org/packages/98/96/a628cef6b3ed1f89ab3bca30285b46e477bb01bd7fdf6a63e68a0f85c769/biomero-1.5.1.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.5.1 2024-04-02T13:48:16,054 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/ab/be/922b8b35d2c4a9c317c1095c71c1bcc74443be8f04b2a6ac85cbc2892a78/biomero-1.6.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-04-02T13:48:16,055 Found link https://files.pythonhosted.org/packages/7c/dc/65d7e481ab81cb06ce680bbe77a95f336261381813135dbc6aa0f0cdb1e3/biomero-1.6.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.6.0 2024-04-02T13:48:16,056 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/93/eb/9d2f80d33477bd9d6299ad0b29898a77c18e449e9bfa6c3656562a3f69b9/biomero-1.7.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-04-02T13:48:16,057 Found link https://files.pythonhosted.org/packages/e1/9e/104955b6bb3f34d32fde7b9d1f4be5d5f46a45b25afbee449ac44c905a72/biomero-1.7.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.7.0 2024-04-02T13:48:16,058 Fetching project page and analyzing links: https://www.piwheels.org/simple/biomero/ 2024-04-02T13:48:16,059 Getting page https://www.piwheels.org/simple/biomero/ 2024-04-02T13:48:16,060 Found index url https://www.piwheels.org/simple/ 2024-04-02T13:48:16,429 Fetched page https://www.piwheels.org/simple/biomero/ as text/html 2024-04-02T13:48:16,432 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.6.0-py3-none-any.whl#sha256=f881953b98a86ee2c1508c007dec8ba9b09f98951d65e81405903f1b4efc8515 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-04-02T13:48:16,433 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.5.1-py3-none-any.whl#sha256=419f808c9c52525df6108fbd48d53e82cc965e9857500c4544041a791dd4d65e (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-04-02T13:48:16,433 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.5.0-py3-none-any.whl#sha256=da32037e690913b648bc08b4cf95219e51618920116abdb024914dc4b29393fd (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-04-02T13:48:16,434 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.4.0-py3-none-any.whl#sha256=06a09b9974b9782c3d527bf0ab8d67349261b9af71c6aa3ebf12f342eddd9286 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-04-02T13:48:16,434 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.3.0-py3-none-any.whl#sha256=e87fb4e5b3565cfa3b27830d8d1d1bff5c1054bfb032d2e6055e966ef84df39d (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-04-02T13:48:16,435 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.2.0-py3-none-any.whl#sha256=0a3d446aaed8e43c191ec7b78fd1731e91935fd1e432bde72a96689be19f8dbf (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-04-02T13:48:16,436 Skipping link: not a file: https://www.piwheels.org/simple/biomero/ 2024-04-02T13:48:16,436 Skipping link: not a file: https://pypi.org/simple/biomero/ 2024-04-02T13:48:16,456 Given no hashes to check 1 links for project 'biomero': discarding no candidates 2024-04-02T13:48:16,474 Collecting biomero==1.7.0 2024-04-02T13:48:16,477 Created temporary directory: /tmp/pip-unpack-28817o0r 2024-04-02T13:48:16,920 Downloading biomero-1.7.0.tar.gz (1.1 MB) 2024-04-02T13:48:17,450 Added biomero==1.7.0 from https://files.pythonhosted.org/packages/e1/9e/104955b6bb3f34d32fde7b9d1f4be5d5f46a45b25afbee449ac44c905a72/biomero-1.7.0.tar.gz to build tracker '/tmp/pip-build-tracker-hbynyj_p' 2024-04-02T13:48:17,461 Created temporary directory: /tmp/pip-build-env-46t4mqcn 2024-04-02T13:48:17,469 Installing build dependencies: started 2024-04-02T13:48:17,471 Running command pip subprocess to install build dependencies 2024-04-02T13:48:18,709 Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-04-02T13:48:19,486 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-04-02T13:48:21,273 Collecting setuptools>=45 2024-04-02T13:48:21,291 Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.2.0-py3-none-any.whl (821 kB) 2024-04-02T13:48:21,636 Collecting setuptools_scm>=6.2 (from setuptools_scm[toml]>=6.2) 2024-04-02T13:48:21,652 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-8.0.4-py3-none-any.whl (42 kB) 2024-04-02T13:48:22,000 Collecting packaging>=20 (from setuptools_scm>=6.2->setuptools_scm[toml]>=6.2) 2024-04-02T13:48:22,016 Using cached https://www.piwheels.org/simple/packaging/packaging-24.0-py3-none-any.whl (53 kB) 2024-04-02T13:48:22,137 Collecting typing-extensions (from setuptools_scm>=6.2->setuptools_scm[toml]>=6.2) 2024-04-02T13:48:22,156 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.10.0-py3-none-any.whl (33 kB) 2024-04-02T13:48:24,740 Installing collected packages: typing-extensions, setuptools, packaging, setuptools_scm 2024-04-02T13:48:27,825 Successfully installed packaging-24.0 setuptools-69.2.0 setuptools_scm-8.0.4 typing-extensions-4.10.0 2024-04-02T13:48:28,419 Installing build dependencies: finished with status 'done' 2024-04-02T13:48:28,423 Getting requirements to build wheel: started 2024-04-02T13:48:28,425 Running command Getting requirements to build wheel 2024-04-02T13:48:29,313 running egg_info 2024-04-02T13:48:29,318 writing biomero.egg-info/PKG-INFO 2024-04-02T13:48:29,326 writing dependency_links to biomero.egg-info/dependency_links.txt 2024-04-02T13:48:29,328 writing requirements to biomero.egg-info/requires.txt 2024-04-02T13:48:29,330 writing top-level names to biomero.egg-info/top_level.txt 2024-04-02T13:48:29,379 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-04-02T13:48:29,383 reading manifest file 'biomero.egg-info/SOURCES.txt' 2024-04-02T13:48:29,386 reading manifest template 'MANIFEST.in' 2024-04-02T13:48:29,399 adding license file 'LICENSE' 2024-04-02T13:48:29,402 writing manifest file 'biomero.egg-info/SOURCES.txt' 2024-04-02T13:48:29,522 Getting requirements to build wheel: finished with status 'done' 2024-04-02T13:48:29,538 Installing backend dependencies: started 2024-04-02T13:48:29,539 Running command pip subprocess to install backend dependencies 2024-04-02T13:48:30,729 Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-04-02T13:48:31,298 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-04-02T13:48:31,803 Collecting wheel 2024-04-02T13:48:31,820 Using cached https://www.piwheels.org/simple/wheel/wheel-0.43.0-py3-none-any.whl (65 kB) 2024-04-02T13:48:34,222 Installing collected packages: wheel 2024-04-02T13:48:34,495 Creating /tmp/pip-build-env-46t4mqcn/normal/local/bin 2024-04-02T13:48:34,497 changing mode of /tmp/pip-build-env-46t4mqcn/normal/local/bin/wheel to 755 2024-04-02T13:48:34,512 Successfully installed wheel-0.43.0 2024-04-02T13:48:35,069 Installing backend dependencies: finished with status 'done' 2024-04-02T13:48:35,071 Created temporary directory: /tmp/pip-modern-metadata-cmzfd74a 2024-04-02T13:48:35,073 Preparing metadata (pyproject.toml): started 2024-04-02T13:48:35,075 Running command Preparing metadata (pyproject.toml) 2024-04-02T13:48:36,277 running dist_info 2024-04-02T13:48:36,288 creating /tmp/pip-modern-metadata-cmzfd74a/biomero.egg-info 2024-04-02T13:48:36,296 writing /tmp/pip-modern-metadata-cmzfd74a/biomero.egg-info/PKG-INFO 2024-04-02T13:48:36,305 writing dependency_links to /tmp/pip-modern-metadata-cmzfd74a/biomero.egg-info/dependency_links.txt 2024-04-02T13:48:36,308 writing requirements to /tmp/pip-modern-metadata-cmzfd74a/biomero.egg-info/requires.txt 2024-04-02T13:48:36,310 writing top-level names to /tmp/pip-modern-metadata-cmzfd74a/biomero.egg-info/top_level.txt 2024-04-02T13:48:36,312 writing manifest file '/tmp/pip-modern-metadata-cmzfd74a/biomero.egg-info/SOURCES.txt' 2024-04-02T13:48:36,365 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-04-02T13:48:36,369 reading manifest file '/tmp/pip-modern-metadata-cmzfd74a/biomero.egg-info/SOURCES.txt' 2024-04-02T13:48:36,372 reading manifest template 'MANIFEST.in' 2024-04-02T13:48:36,384 adding license file 'LICENSE' 2024-04-02T13:48:36,386 writing manifest file '/tmp/pip-modern-metadata-cmzfd74a/biomero.egg-info/SOURCES.txt' 2024-04-02T13:48:36,388 creating '/tmp/pip-modern-metadata-cmzfd74a/biomero-1.7.0.dist-info' 2024-04-02T13:48:36,564 Preparing metadata (pyproject.toml): finished with status 'done' 2024-04-02T13:48:36,573 Source in /tmp/pip-wheel-b4_xzg23/biomero_00ff4ecd4364498abdbfe605ee766666 has version 1.7.0, which satisfies requirement biomero==1.7.0 from https://files.pythonhosted.org/packages/e1/9e/104955b6bb3f34d32fde7b9d1f4be5d5f46a45b25afbee449ac44c905a72/biomero-1.7.0.tar.gz 2024-04-02T13:48:36,574 Removed biomero==1.7.0 from https://files.pythonhosted.org/packages/e1/9e/104955b6bb3f34d32fde7b9d1f4be5d5f46a45b25afbee449ac44c905a72/biomero-1.7.0.tar.gz from build tracker '/tmp/pip-build-tracker-hbynyj_p' 2024-04-02T13:48:36,586 Created temporary directory: /tmp/pip-unpack-3fb9917v 2024-04-02T13:48:36,587 Created temporary directory: /tmp/pip-unpack-px97dgj1 2024-04-02T13:48:36,608 Building wheels for collected packages: biomero 2024-04-02T13:48:36,613 Created temporary directory: /tmp/pip-wheel-91_t3061 2024-04-02T13:48:36,614 Destination directory: /tmp/pip-wheel-91_t3061 2024-04-02T13:48:36,616 Building wheel for biomero (pyproject.toml): started 2024-04-02T13:48:36,617 Running command Building wheel for biomero (pyproject.toml) 2024-04-02T13:48:37,476 running bdist_wheel 2024-04-02T13:48:37,499 running build 2024-04-02T13:48:37,500 running build_py 2024-04-02T13:48:37,506 creating build 2024-04-02T13:48:37,507 creating build/lib 2024-04-02T13:48:37,508 creating build/lib/resources 2024-04-02T13:48:37,510 copying resources/convert_zarr_to_tiff.py -> build/lib/resources 2024-04-02T13:48:37,512 copying resources/__init__.py -> build/lib/resources 2024-04-02T13:48:37,515 creating build/lib/docs 2024-04-02T13:48:37,516 copying docs/conf.py -> build/lib/docs 2024-04-02T13:48:37,519 creating build/lib/biomero 2024-04-02T13:48:37,520 copying biomero/slurm_client.py -> build/lib/biomero 2024-04-02T13:48:37,527 copying biomero/constants.py -> build/lib/biomero 2024-04-02T13:48:37,529 copying biomero/__init__.py -> build/lib/biomero 2024-04-02T13:48:37,532 creating build/lib/tests 2024-04-02T13:48:37,533 creating build/lib/tests/unit 2024-04-02T13:48:37,534 copying tests/unit/test_slurm_client.py -> build/lib/tests/unit 2024-04-02T13:48:37,538 copying tests/unit/__init__.py -> build/lib/tests/unit 2024-04-02T13:48:37,540 creating build/lib/tests/integration 2024-04-02T13:48:37,541 copying tests/integration/__init__.py -> build/lib/tests/integration 2024-04-02T13:48:37,544 running egg_info 2024-04-02T13:48:37,549 writing biomero.egg-info/PKG-INFO 2024-04-02T13:48:37,555 writing dependency_links to biomero.egg-info/dependency_links.txt 2024-04-02T13:48:37,557 writing requirements to biomero.egg-info/requires.txt 2024-04-02T13:48:37,558 writing top-level names to biomero.egg-info/top_level.txt 2024-04-02T13:48:37,591 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-04-02T13:48:37,594 reading manifest file 'biomero.egg-info/SOURCES.txt' 2024-04-02T13:48:37,599 reading manifest template 'MANIFEST.in' 2024-04-02T13:48:37,611 adding license file 'LICENSE' 2024-04-02T13:48:37,615 writing manifest file 'biomero.egg-info/SOURCES.txt' 2024-04-02T13:48:37,622 copying resources/convert_job_array.sh -> build/lib/resources 2024-04-02T13:48:37,624 copying resources/convert_zarr_to_tiff.def -> build/lib/resources 2024-04-02T13:48:37,626 copying resources/example.config -> build/lib/resources 2024-04-02T13:48:37,628 copying resources/job_template.sh -> build/lib/resources 2024-04-02T13:48:37,631 copying resources/pull_images.sh -> build/lib/resources 2024-04-02T13:48:37,633 copying resources/slurm-config.ini -> build/lib/resources 2024-04-02T13:48:37,636 copying docs/Makefile -> build/lib/docs 2024-04-02T13:48:37,638 copying docs/index.rst -> build/lib/docs 2024-04-02T13:48:37,640 copying docs/make.bat -> build/lib/docs 2024-04-02T13:48:37,642 copying docs/modules.rst -> build/lib/docs 2024-04-02T13:48:37,644 copying docs/omero_slurm_client.rst -> build/lib/docs 2024-04-02T13:48:37,646 copying docs/readme_link.md -> build/lib/docs 2024-04-02T13:48:37,649 copying docs/requirements.txt -> build/lib/docs 2024-04-02T13:48:37,652 copying docs/tutorial_link.md -> build/lib/docs 2024-04-02T13:48:37,655 creating build/lib/resources/tutorials 2024-04-02T13:48:37,656 copying resources/tutorials/tutorial_Azure_slurm.md -> build/lib/resources/tutorials 2024-04-02T13:48:37,659 copying resources/tutorials/tutorial_GoogleCloud_slurm.md -> build/lib/resources/tutorials 2024-04-02T13:48:37,662 copying resources/tutorials/tutorial_cellexpansion.md -> build/lib/resources/tutorials 2024-04-02T13:48:37,665 copying resources/tutorials/tutorial_cellprofiler.md -> build/lib/resources/tutorials 2024-04-02T13:48:37,668 copying resources/tutorials/tutorial_local_slurm.md -> build/lib/resources/tutorials 2024-04-02T13:48:37,671 creating build/lib/resources/tutorials/images 2024-04-02T13:48:37,672 copying resources/tutorials/images/Cells.tif -> build/lib/resources/tutorials/images 2024-04-02T13:48:37,685 copying resources/tutorials/images/cellexpansion.png -> build/lib/resources/tutorials/images 2024-04-02T13:48:37,774 copying resources/tutorials/images/gc_allow_ssh.PNG -> build/lib/resources/tutorials/images 2024-04-02T13:48:37,779 copying resources/tutorials/images/nuclei_labels.png -> build/lib/resources/tutorials/images 2024-04-02T13:48:37,786 copying resources/tutorials/images/webclient_init_env.PNG -> build/lib/resources/tutorials/images 2024-04-02T13:48:37,789 copying resources/tutorials/images/webclient_init_env_done.PNG -> build/lib/resources/tutorials/images 2024-04-02T13:48:37,793 copying resources/tutorials/images/webclient_run_cellpose.PNG -> build/lib/resources/tutorials/images 2024-04-02T13:48:37,797 copying resources/tutorials/images/webclient_run_workflow.PNG -> build/lib/resources/tutorials/images 2024-04-02T13:48:37,814 installing to build/bdist.linux-armv7l/wheel 2024-04-02T13:48:37,815 running install 2024-04-02T13:48:37,839 running install_lib 2024-04-02T13:48:37,845 creating build/bdist.linux-armv7l 2024-04-02T13:48:37,845 creating build/bdist.linux-armv7l/wheel 2024-04-02T13:48:37,847 creating build/bdist.linux-armv7l/wheel/tests 2024-04-02T13:48:37,848 creating build/bdist.linux-armv7l/wheel/tests/unit 2024-04-02T13:48:37,850 copying build/lib/tests/unit/test_slurm_client.py -> build/bdist.linux-armv7l/wheel/tests/unit 2024-04-02T13:48:37,853 copying build/lib/tests/unit/__init__.py -> build/bdist.linux-armv7l/wheel/tests/unit 2024-04-02T13:48:37,856 creating build/bdist.linux-armv7l/wheel/tests/integration 2024-04-02T13:48:37,857 copying build/lib/tests/integration/__init__.py -> build/bdist.linux-armv7l/wheel/tests/integration 2024-04-02T13:48:37,860 creating build/bdist.linux-armv7l/wheel/resources 2024-04-02T13:48:37,861 copying build/lib/resources/convert_zarr_to_tiff.py -> build/bdist.linux-armv7l/wheel/resources 2024-04-02T13:48:37,864 copying build/lib/resources/example.config -> build/bdist.linux-armv7l/wheel/resources 2024-04-02T13:48:37,866 copying build/lib/resources/__init__.py -> build/bdist.linux-armv7l/wheel/resources 2024-04-02T13:48:37,868 copying build/lib/resources/convert_job_array.sh -> build/bdist.linux-armv7l/wheel/resources 2024-04-02T13:48:37,870 copying build/lib/resources/pull_images.sh -> build/bdist.linux-armv7l/wheel/resources 2024-04-02T13:48:37,872 copying build/lib/resources/job_template.sh -> build/bdist.linux-armv7l/wheel/resources 2024-04-02T13:48:37,874 copying build/lib/resources/slurm-config.ini -> build/bdist.linux-armv7l/wheel/resources 2024-04-02T13:48:37,877 creating build/bdist.linux-armv7l/wheel/resources/tutorials 2024-04-02T13:48:37,878 copying build/lib/resources/tutorials/tutorial_cellexpansion.md -> build/bdist.linux-armv7l/wheel/resources/tutorials 2024-04-02T13:48:37,882 copying build/lib/resources/tutorials/tutorial_cellprofiler.md -> build/bdist.linux-armv7l/wheel/resources/tutorials 2024-04-02T13:48:37,886 copying build/lib/resources/tutorials/tutorial_local_slurm.md -> build/bdist.linux-armv7l/wheel/resources/tutorials 2024-04-02T13:48:37,889 copying build/lib/resources/tutorials/tutorial_Azure_slurm.md -> build/bdist.linux-armv7l/wheel/resources/tutorials 2024-04-02T13:48:37,893 copying build/lib/resources/tutorials/tutorial_GoogleCloud_slurm.md -> build/bdist.linux-armv7l/wheel/resources/tutorials 2024-04-02T13:48:37,896 creating build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-04-02T13:48:37,897 copying build/lib/resources/tutorials/images/webclient_run_workflow.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-04-02T13:48:37,904 copying build/lib/resources/tutorials/images/cellexpansion.png -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-04-02T13:48:37,913 copying build/lib/resources/tutorials/images/Cells.tif -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-04-02T13:48:37,925 copying build/lib/resources/tutorials/images/webclient_run_cellpose.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-04-02T13:48:37,929 copying build/lib/resources/tutorials/images/webclient_init_env.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-04-02T13:48:37,932 copying build/lib/resources/tutorials/images/nuclei_labels.png -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-04-02T13:48:37,941 copying build/lib/resources/tutorials/images/webclient_init_env_done.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-04-02T13:48:37,945 copying build/lib/resources/tutorials/images/gc_allow_ssh.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-04-02T13:48:37,948 copying build/lib/resources/convert_zarr_to_tiff.def -> build/bdist.linux-armv7l/wheel/resources 2024-04-02T13:48:37,951 creating build/bdist.linux-armv7l/wheel/docs 2024-04-02T13:48:37,952 copying build/lib/docs/modules.rst -> build/bdist.linux-armv7l/wheel/docs 2024-04-02T13:48:37,954 copying build/lib/docs/index.rst -> build/bdist.linux-armv7l/wheel/docs 2024-04-02T13:48:37,957 copying build/lib/docs/conf.py -> build/bdist.linux-armv7l/wheel/docs 2024-04-02T13:48:37,959 copying build/lib/docs/readme_link.md -> build/bdist.linux-armv7l/wheel/docs 2024-04-02T13:48:37,962 copying build/lib/docs/requirements.txt -> build/bdist.linux-armv7l/wheel/docs 2024-04-02T13:48:37,964 copying build/lib/docs/Makefile -> build/bdist.linux-armv7l/wheel/docs 2024-04-02T13:48:37,967 copying build/lib/docs/make.bat -> build/bdist.linux-armv7l/wheel/docs 2024-04-02T13:48:37,969 copying build/lib/docs/tutorial_link.md -> build/bdist.linux-armv7l/wheel/docs 2024-04-02T13:48:37,972 copying build/lib/docs/omero_slurm_client.rst -> build/bdist.linux-armv7l/wheel/docs 2024-04-02T13:48:37,974 creating build/bdist.linux-armv7l/wheel/biomero 2024-04-02T13:48:37,975 copying build/lib/biomero/slurm_client.py -> build/bdist.linux-armv7l/wheel/biomero 2024-04-02T13:48:37,980 copying build/lib/biomero/constants.py -> build/bdist.linux-armv7l/wheel/biomero 2024-04-02T13:48:37,982 copying build/lib/biomero/__init__.py -> build/bdist.linux-armv7l/wheel/biomero 2024-04-02T13:48:37,984 running install_egg_info 2024-04-02T13:48:37,989 Copying biomero.egg-info to build/bdist.linux-armv7l/wheel/biomero-1.7.0-py3.11.egg-info 2024-04-02T13:48:38,003 running install_scripts 2024-04-02T13:48:38,025 creating build/bdist.linux-armv7l/wheel/biomero-1.7.0.dist-info/WHEEL 2024-04-02T13:48:38,028 creating '/tmp/pip-wheel-91_t3061/.tmp-dwk7kq15/biomero-1.7.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-04-02T13:48:38,031 adding 'biomero/__init__.py' 2024-04-02T13:48:38,032 adding 'biomero/constants.py' 2024-04-02T13:48:38,042 adding 'biomero/slurm_client.py' 2024-04-02T13:48:38,045 adding 'docs/Makefile' 2024-04-02T13:48:38,047 adding 'docs/conf.py' 2024-04-02T13:48:38,048 adding 'docs/index.rst' 2024-04-02T13:48:38,050 adding 'docs/make.bat' 2024-04-02T13:48:38,051 adding 'docs/modules.rst' 2024-04-02T13:48:38,052 adding 'docs/omero_slurm_client.rst' 2024-04-02T13:48:38,054 adding 'docs/readme_link.md' 2024-04-02T13:48:38,055 adding 'docs/requirements.txt' 2024-04-02T13:48:38,056 adding 'docs/tutorial_link.md' 2024-04-02T13:48:38,058 adding 'resources/__init__.py' 2024-04-02T13:48:38,059 adding 'resources/convert_job_array.sh' 2024-04-02T13:48:38,061 adding 'resources/convert_zarr_to_tiff.def' 2024-04-02T13:48:38,062 adding 'resources/convert_zarr_to_tiff.py' 2024-04-02T13:48:38,063 adding 'resources/example.config' 2024-04-02T13:48:38,065 adding 'resources/job_template.sh' 2024-04-02T13:48:38,066 adding 'resources/pull_images.sh' 2024-04-02T13:48:38,068 adding 'resources/slurm-config.ini' 2024-04-02T13:48:38,071 adding 'resources/tutorials/tutorial_Azure_slurm.md' 2024-04-02T13:48:38,074 adding 'resources/tutorials/tutorial_GoogleCloud_slurm.md' 2024-04-02T13:48:38,075 adding 'resources/tutorials/tutorial_cellexpansion.md' 2024-04-02T13:48:38,079 adding 'resources/tutorials/tutorial_cellprofiler.md' 2024-04-02T13:48:38,083 adding 'resources/tutorials/tutorial_local_slurm.md' 2024-04-02T13:48:38,124 adding 'resources/tutorials/images/Cells.tif' 2024-04-02T13:48:38,161 adding 'resources/tutorials/images/cellexpansion.png' 2024-04-02T13:48:38,173 adding 'resources/tutorials/images/gc_allow_ssh.PNG' 2024-04-02T13:48:38,197 adding 'resources/tutorials/images/nuclei_labels.png' 2024-04-02T13:48:38,200 adding 'resources/tutorials/images/webclient_init_env.PNG' 2024-04-02T13:48:38,203 adding 'resources/tutorials/images/webclient_init_env_done.PNG' 2024-04-02T13:48:38,208 adding 'resources/tutorials/images/webclient_run_cellpose.PNG' 2024-04-02T13:48:38,214 adding 'resources/tutorials/images/webclient_run_workflow.PNG' 2024-04-02T13:48:38,217 adding 'tests/integration/__init__.py' 2024-04-02T13:48:38,219 adding 'tests/unit/__init__.py' 2024-04-02T13:48:38,223 adding 'tests/unit/test_slurm_client.py' 2024-04-02T13:48:38,226 adding 'biomero-1.7.0.dist-info/LICENSE' 2024-04-02T13:48:38,233 adding 'biomero-1.7.0.dist-info/METADATA' 2024-04-02T13:48:38,235 adding 'biomero-1.7.0.dist-info/WHEEL' 2024-04-02T13:48:38,236 adding 'biomero-1.7.0.dist-info/top_level.txt' 2024-04-02T13:48:38,237 adding 'biomero-1.7.0.dist-info/RECORD' 2024-04-02T13:48:38,313 removing build/bdist.linux-armv7l/wheel 2024-04-02T13:48:38,459 Building wheel for biomero (pyproject.toml): finished with status 'done' 2024-04-02T13:48:38,492 Created wheel for biomero: filename=biomero-1.7.0-py3-none-any.whl size=1090770 sha256=df715c10bf0a3fe33bd73a44c98bf4b4b75bf0c70d3deb65f4dda3d3813b85e1 2024-04-02T13:48:38,493 Stored in directory: /tmp/pip-ephem-wheel-cache-4r39sey0/wheels/1e/d3/90/19d4ee4227da8a0041c6b9e67c7d2d5a58aa7f272056e9b683 2024-04-02T13:48:38,518 Successfully built biomero 2024-04-02T13:48:38,616 Removed build tracker: '/tmp/pip-build-tracker-hbynyj_p'