2024-04-02T19:17:46,648 Created temporary directory: /tmp/pip-build-tracker-sccammot 2024-04-02T19:17:46,650 Initialized build tracking at /tmp/pip-build-tracker-sccammot 2024-04-02T19:17:46,650 Created build tracker: /tmp/pip-build-tracker-sccammot 2024-04-02T19:17:46,651 Entered build tracker: /tmp/pip-build-tracker-sccammot 2024-04-02T19:17:46,651 Created temporary directory: /tmp/pip-wheel-fsl5bla4 2024-04-02T19:17:46,655 Created temporary directory: /tmp/pip-ephem-wheel-cache-0te4p286 2024-04-02T19:17:46,677 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-04-02T19:17:46,680 2 location(s) to search for versions of sed-scores-eval: 2024-04-02T19:17:46,680 * https://pypi.org/simple/sed-scores-eval/ 2024-04-02T19:17:46,680 * https://www.piwheels.org/simple/sed-scores-eval/ 2024-04-02T19:17:46,681 Fetching project page and analyzing links: https://pypi.org/simple/sed-scores-eval/ 2024-04-02T19:17:46,682 Getting page https://pypi.org/simple/sed-scores-eval/ 2024-04-02T19:17:46,683 Found index url https://pypi.org/simple/ 2024-04-02T19:17:46,900 Fetched page https://pypi.org/simple/sed-scores-eval/ as application/vnd.pypi.simple.v1+json 2024-04-02T19:17:46,902 Skipping link: No binaries permitted for sed-scores-eval: https://files.pythonhosted.org/packages/ce/04/1b4518b2540ba9f569a457efcbb9348eead9e5bfe3ef2e9c4e848408e2a7/sed_scores_eval-0.0.0-py3-none-any.whl (from https://pypi.org/simple/sed-scores-eval/) 2024-04-02T19:17:46,903 Found link https://files.pythonhosted.org/packages/23/34/a7484819652f0235fbbd0861e7c39c548fb57574d55e6c15f5e5f98e1f13/sed_scores_eval-0.0.0.tar.gz (from https://pypi.org/simple/sed-scores-eval/), version: 0.0.0 2024-04-02T19:17:46,904 Skipping link: No binaries permitted for sed-scores-eval: https://files.pythonhosted.org/packages/a2/33/d5bd789dae420c1c78a38c9ed067bc0fb76d0c3d79a2abcaa7d4441fc054/sed_scores_eval-0.0.1-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/sed-scores-eval/) 2024-04-02T19:17:46,904 Found link https://files.pythonhosted.org/packages/99/a8/f9df19f6a817fa86d8d6da42cd61b448accb9fe3688a23bea479fbf23764/sed_scores_eval-0.0.1.tar.gz (from https://pypi.org/simple/sed-scores-eval/), version: 0.0.1 2024-04-02T19:17:46,905 Skipping link: No binaries permitted for sed-scores-eval: https://files.pythonhosted.org/packages/c3/62/4f58017f89270e01da5e5f35323c0c51e10ac12dc5d76604c00d21fb2afd/sed_scores_eval-0.0.2-cp311-cp311-macosx_11_0_arm64.whl (from https://pypi.org/simple/sed-scores-eval/) 2024-04-02T19:17:46,906 Found link https://files.pythonhosted.org/packages/86/cf/92a85b6732f78a7104d1d37927d9b8d710554cda230704b1516474a0b694/sed_scores_eval-0.0.2.tar.gz (from https://pypi.org/simple/sed-scores-eval/), version: 0.0.2 2024-04-02T19:17:46,907 Fetching project page and analyzing links: https://www.piwheels.org/simple/sed-scores-eval/ 2024-04-02T19:17:46,907 Getting page https://www.piwheels.org/simple/sed-scores-eval/ 2024-04-02T19:17:46,908 Found index url https://www.piwheels.org/simple/ 2024-04-02T19:17:47,234 Fetched page https://www.piwheels.org/simple/sed-scores-eval/ as text/html 2024-04-02T19:17:47,235 Skipping link: No binaries permitted for sed-scores-eval: https://www.piwheels.org/simple/sed-scores-eval/sed_scores_eval-0.0.0-py3-none-any.whl#sha256=199e650327e293e6b01923ef0bdfd43f8e026aa1f08501601cee085778414435 (from https://www.piwheels.org/simple/sed-scores-eval/) 2024-04-02T19:17:47,236 Skipping link: not a file: https://www.piwheels.org/simple/sed-scores-eval/ 2024-04-02T19:17:47,236 Skipping link: not a file: https://pypi.org/simple/sed-scores-eval/ 2024-04-02T19:17:47,255 Given no hashes to check 1 links for project 'sed-scores-eval': discarding no candidates 2024-04-02T19:17:47,273 Collecting sed-scores-eval==0.0.2 2024-04-02T19:17:47,275 Created temporary directory: /tmp/pip-unpack-mz0ochr1 2024-04-02T19:17:47,496 Downloading sed_scores_eval-0.0.2.tar.gz (376 kB) 2024-04-02T19:17:47,792 Added sed-scores-eval==0.0.2 from https://files.pythonhosted.org/packages/86/cf/92a85b6732f78a7104d1d37927d9b8d710554cda230704b1516474a0b694/sed_scores_eval-0.0.2.tar.gz to build tracker '/tmp/pip-build-tracker-sccammot' 2024-04-02T19:17:47,794 Running setup.py (path:/tmp/pip-wheel-fsl5bla4/sed-scores-eval_60d8a10a4e214b6198759f37536380cd/setup.py) egg_info for package sed-scores-eval 2024-04-02T19:17:47,795 Created temporary directory: /tmp/pip-pip-egg-info-ojly3a45 2024-04-02T19:17:47,796 Preparing metadata (setup.py): started 2024-04-02T19:17:47,797 Running command python setup.py egg_info 2024-04-02T19:17:55,077 Compiling sed_scores_eval/base_modules/cy_detection.pyx because it changed. 2024-04-02T19:17:55,077 Compiling sed_scores_eval/base_modules/cy_medfilt.pyx because it changed. 2024-04-02T19:17:55,078 [1/2] Cythonizing sed_scores_eval/base_modules/cy_detection.pyx 2024-04-02T19:17:55,078 [2/2] Cythonizing sed_scores_eval/base_modules/cy_medfilt.pyx 2024-04-02T19:17:55,525 running egg_info 2024-04-02T19:17:55,527 creating /tmp/pip-pip-egg-info-ojly3a45/sed_scores_eval.egg-info 2024-04-02T19:17:55,552 writing /tmp/pip-pip-egg-info-ojly3a45/sed_scores_eval.egg-info/PKG-INFO 2024-04-02T19:17:55,557 writing dependency_links to /tmp/pip-pip-egg-info-ojly3a45/sed_scores_eval.egg-info/dependency_links.txt 2024-04-02T19:17:55,560 writing requirements to /tmp/pip-pip-egg-info-ojly3a45/sed_scores_eval.egg-info/requires.txt 2024-04-02T19:17:55,561 writing top-level names to /tmp/pip-pip-egg-info-ojly3a45/sed_scores_eval.egg-info/top_level.txt 2024-04-02T19:17:55,562 writing manifest file '/tmp/pip-pip-egg-info-ojly3a45/sed_scores_eval.egg-info/SOURCES.txt' 2024-04-02T19:17:55,673 reading manifest file '/tmp/pip-pip-egg-info-ojly3a45/sed_scores_eval.egg-info/SOURCES.txt' 2024-04-02T19:17:55,675 adding license file 'LICENSE' 2024-04-02T19:17:55,678 writing manifest file '/tmp/pip-pip-egg-info-ojly3a45/sed_scores_eval.egg-info/SOURCES.txt' 2024-04-02T19:17:56,348 Preparing metadata (setup.py): finished with status 'done' 2024-04-02T19:17:56,352 Source in /tmp/pip-wheel-fsl5bla4/sed-scores-eval_60d8a10a4e214b6198759f37536380cd has version 0.0.2, which satisfies requirement sed-scores-eval==0.0.2 from https://files.pythonhosted.org/packages/86/cf/92a85b6732f78a7104d1d37927d9b8d710554cda230704b1516474a0b694/sed_scores_eval-0.0.2.tar.gz 2024-04-02T19:17:56,353 Removed sed-scores-eval==0.0.2 from https://files.pythonhosted.org/packages/86/cf/92a85b6732f78a7104d1d37927d9b8d710554cda230704b1516474a0b694/sed_scores_eval-0.0.2.tar.gz from build tracker '/tmp/pip-build-tracker-sccammot' 2024-04-02T19:17:56,358 Created temporary directory: /tmp/pip-unpack-21gyvgzk 2024-04-02T19:17:56,359 Created temporary directory: /tmp/pip-unpack-8_ho5vsr 2024-04-02T19:17:56,381 Building wheels for collected packages: sed-scores-eval 2024-04-02T19:17:56,385 Created temporary directory: /tmp/pip-wheel-d7rskt5q 2024-04-02T19:17:56,386 Building wheel for sed-scores-eval (setup.py): started 2024-04-02T19:17:56,387 Destination directory: /tmp/pip-wheel-d7rskt5q 2024-04-02T19:17:56,388 Running command python setup.py bdist_wheel 2024-04-02T19:17:58,202 running bdist_wheel 2024-04-02T19:17:58,296 running build 2024-04-02T19:17:58,297 running build_py 2024-04-02T19:17:58,323 creating build 2024-04-02T19:17:58,324 creating build/lib.linux-armv7l-cpython-311 2024-04-02T19:17:58,325 creating build/lib.linux-armv7l-cpython-311/sed_scores_eval 2024-04-02T19:17:58,326 copying sed_scores_eval/__init__.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval 2024-04-02T19:17:58,329 creating build/lib.linux-armv7l-cpython-311/sed_scores_eval/segment_based 2024-04-02T19:17:58,330 copying sed_scores_eval/segment_based/error_rate.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/segment_based 2024-04-02T19:17:58,332 copying sed_scores_eval/segment_based/reference.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/segment_based 2024-04-02T19:17:58,334 copying sed_scores_eval/segment_based/roc.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/segment_based 2024-04-02T19:17:58,336 copying sed_scores_eval/segment_based/intermediate_statistics.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/segment_based 2024-04-02T19:17:58,338 copying sed_scores_eval/segment_based/precision_recall.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/segment_based 2024-04-02T19:17:58,340 copying sed_scores_eval/segment_based/__init__.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/segment_based 2024-04-02T19:17:58,342 creating build/lib.linux-armv7l-cpython-311/sed_scores_eval/clip_based 2024-04-02T19:17:58,343 copying sed_scores_eval/clip_based/error_rate.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/clip_based 2024-04-02T19:17:58,345 copying sed_scores_eval/clip_based/reference.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/clip_based 2024-04-02T19:17:58,347 copying sed_scores_eval/clip_based/roc.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/clip_based 2024-04-02T19:17:58,349 copying sed_scores_eval/clip_based/intermediate_statistics.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/clip_based 2024-04-02T19:17:58,351 copying sed_scores_eval/clip_based/precision_recall.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/clip_based 2024-04-02T19:17:58,353 copying sed_scores_eval/clip_based/__init__.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/clip_based 2024-04-02T19:17:58,355 creating build/lib.linux-armv7l-cpython-311/sed_scores_eval/utils 2024-04-02T19:17:58,356 copying sed_scores_eval/utils/parallel.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/utils 2024-04-02T19:17:58,357 copying sed_scores_eval/utils/nested.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/utils 2024-04-02T19:17:58,359 copying sed_scores_eval/utils/visualization.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/utils 2024-04-02T19:17:58,361 copying sed_scores_eval/utils/__init__.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/utils 2024-04-02T19:17:58,362 copying sed_scores_eval/utils/test.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/utils 2024-04-02T19:17:58,364 copying sed_scores_eval/utils/array_ops.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/utils 2024-04-02T19:17:58,366 creating build/lib.linux-armv7l-cpython-311/sed_scores_eval/collar_based 2024-04-02T19:17:58,367 copying sed_scores_eval/collar_based/error_rate.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/collar_based 2024-04-02T19:17:58,369 copying sed_scores_eval/collar_based/reference.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/collar_based 2024-04-02T19:17:58,371 copying sed_scores_eval/collar_based/intermediate_statistics.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/collar_based 2024-04-02T19:17:58,373 copying sed_scores_eval/collar_based/precision_recall.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/collar_based 2024-04-02T19:17:58,376 copying sed_scores_eval/collar_based/__init__.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/collar_based 2024-04-02T19:17:58,378 creating build/lib.linux-armv7l-cpython-311/sed_scores_eval/intersection_based 2024-04-02T19:17:58,379 copying sed_scores_eval/intersection_based/error_rate.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/intersection_based 2024-04-02T19:17:58,381 copying sed_scores_eval/intersection_based/reference.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/intersection_based 2024-04-02T19:17:58,384 copying sed_scores_eval/intersection_based/pipsds.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/intersection_based 2024-04-02T19:17:58,386 copying sed_scores_eval/intersection_based/intermediate_statistics.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/intersection_based 2024-04-02T19:17:58,388 copying sed_scores_eval/intersection_based/precision_recall.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/intersection_based 2024-04-02T19:17:58,391 copying sed_scores_eval/intersection_based/__init__.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/intersection_based 2024-04-02T19:17:58,392 copying sed_scores_eval/intersection_based/psds.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/intersection_based 2024-04-02T19:17:58,396 creating build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules 2024-04-02T19:17:58,396 copying sed_scores_eval/base_modules/error_rate.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules 2024-04-02T19:17:58,398 copying sed_scores_eval/base_modules/io.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules 2024-04-02T19:17:58,401 copying sed_scores_eval/base_modules/bootstrap.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules 2024-04-02T19:17:58,403 copying sed_scores_eval/base_modules/curves.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules 2024-04-02T19:17:58,404 copying sed_scores_eval/base_modules/ground_truth.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules 2024-04-02T19:17:58,406 copying sed_scores_eval/base_modules/scores.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules 2024-04-02T19:17:58,408 copying sed_scores_eval/base_modules/roc.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules 2024-04-02T19:17:58,411 copying sed_scores_eval/base_modules/precision_recall.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules 2024-04-02T19:17:58,413 copying sed_scores_eval/base_modules/__init__.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules 2024-04-02T19:17:58,415 copying sed_scores_eval/base_modules/statistics.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules 2024-04-02T19:17:58,417 copying sed_scores_eval/base_modules/detection.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules 2024-04-02T19:17:58,419 copying sed_scores_eval/base_modules/postprocessing.py -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules 2024-04-02T19:17:58,428 copying sed_scores_eval/base_modules/cy_medfilt.pyx -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules 2024-04-02T19:17:58,431 copying sed_scores_eval/base_modules/cy_detection.pyx -> build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules 2024-04-02T19:17:58,436 running build_ext 2024-04-02T19:17:58,444 building 'sed_scores_eval.base_modules.cy_detection' extension 2024-04-02T19:17:58,445 creating build/temp.linux-armv7l-cpython-311 2024-04-02T19:17:58,446 creating build/temp.linux-armv7l-cpython-311/sed_scores_eval 2024-04-02T19:17:58,447 creating build/temp.linux-armv7l-cpython-311/sed_scores_eval/base_modules 2024-04-02T19:17:58,448 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c sed_scores_eval/base_modules/cy_detection.cpp -o build/temp.linux-armv7l-cpython-311/sed_scores_eval/base_modules/cy_detection.o 2024-04-02T19:17:58,801 In file included from /usr/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929, 2024-04-02T19:17:58,802 from /usr/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2024-04-02T19:17:58,802 from /usr/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2024-04-02T19:17:58,803 from sed_scores_eval/base_modules/cy_detection.cpp:1223: 2024-04-02T19:17:58,804 /usr/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-04-02T19:17:58,804 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-04-02T19:17:58,805 | ^~~~~~~ 2024-04-02T19:18:21,772 arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/sed_scores_eval/base_modules/cy_detection.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules/cy_detection.cpython-311-arm-linux-gnueabihf.so 2024-04-02T19:18:21,953 building 'sed_scores_eval.base_modules.cy_medfilt' extension 2024-04-02T19:18:21,954 arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c sed_scores_eval/base_modules/cy_medfilt.cpp -o build/temp.linux-armv7l-cpython-311/sed_scores_eval/base_modules/cy_medfilt.o 2024-04-02T19:18:22,270 In file included from /usr/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929, 2024-04-02T19:18:22,271 from /usr/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2024-04-02T19:18:22,271 from /usr/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2024-04-02T19:18:22,272 from sed_scores_eval/base_modules/cy_medfilt.cpp:1223: 2024-04-02T19:18:22,272 /usr/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-04-02T19:18:22,273 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-04-02T19:18:22,273 | ^~~~~~~ 2024-04-02T19:18:45,591 In file included from /usr/include/c++/12/vector:70, 2024-04-02T19:18:45,592 from sed_scores_eval/base_modules/cy_medfilt.cpp:1232: 2024-04-02T19:18:45,592 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]’: 2024-04-02T19:18:45,593 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2024-04-02T19:18:45,593 439 | vector<_Tp, _Alloc>:: 2024-04-02T19:18:45,594 | ^~~~~~~~~~~~~~~~~~~ 2024-04-02T19:18:45,627 In file included from /usr/include/c++/12/vector:64: 2024-04-02T19:18:45,628 /usr/include/c++/12/bits/stl_vector.h: In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]’: 2024-04-02T19:18:45,629 /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-04-02T19:18:45,630 1287 | _M_realloc_insert(end(), __x); 2024-04-02T19:18:45,631 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ 2024-04-02T19:18:45,713 /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’: 2024-04-02T19:18:45,713 /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector::iterator’ changed in GCC 7.1 2024-04-02T19:18:45,714 439 | vector<_Tp, _Alloc>:: 2024-04-02T19:18:45,715 | ^~~~~~~~~~~~~~~~~~~ 2024-04-02T19:18:45,804 In member function ‘std::vector<_Tp, _Alloc>::reference std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]’, 2024-04-02T19:18:45,805 inlined from ‘void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator]’ at /usr/include/c++/12/bits/stl_vector.h:1294:21, 2024-04-02T19:18:45,806 inlined from ‘std::vector __pyx_convert_vector_from_py_double(PyObject*)’ at sed_scores_eval/base_modules/cy_medfilt.cpp:4786:26: 2024-04-02T19:18:45,806 /usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator >’ changed in GCC 7.1 2024-04-02T19:18:45,807 123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); 2024-04-02T19:18:45,808 | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2024-04-02T19:18:58,460 arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/sed_scores_eval/base_modules/cy_medfilt.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules/cy_medfilt.cpython-311-arm-linux-gnueabihf.so 2024-04-02T19:18:58,779 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-04-02T19:18:58,780 !! 2024-04-02T19:18:58,781 ******************************************************************************** 2024-04-02T19:18:58,781 Please avoid running ``setup.py`` directly. 2024-04-02T19:18:58,782 Instead, use pypa/build, pypa/installer or other 2024-04-02T19:18:58,782 standards-based tools. 2024-04-02T19:18:58,783 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-04-02T19:18:58,784 ******************************************************************************** 2024-04-02T19:18:58,784 !! 2024-04-02T19:18:58,785 self.initialize_options() 2024-04-02T19:18:58,807 installing to build/bdist.linux-armv7l/wheel 2024-04-02T19:18:58,808 running install 2024-04-02T19:18:58,832 running install_lib 2024-04-02T19:18:58,857 creating build/bdist.linux-armv7l 2024-04-02T19:18:58,858 creating build/bdist.linux-armv7l/wheel 2024-04-02T19:18:58,859 creating build/bdist.linux-armv7l/wheel/sed_scores_eval 2024-04-02T19:18:58,861 creating build/bdist.linux-armv7l/wheel/sed_scores_eval/segment_based 2024-04-02T19:18:58,862 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/segment_based/error_rate.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/segment_based 2024-04-02T19:18:58,865 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/segment_based/reference.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/segment_based 2024-04-02T19:18:58,867 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/segment_based/roc.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/segment_based 2024-04-02T19:18:58,870 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/segment_based/intermediate_statistics.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/segment_based 2024-04-02T19:18:58,872 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/segment_based/precision_recall.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/segment_based 2024-04-02T19:18:58,876 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/segment_based/__init__.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/segment_based 2024-04-02T19:18:58,878 creating build/bdist.linux-armv7l/wheel/sed_scores_eval/clip_based 2024-04-02T19:18:58,880 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/clip_based/error_rate.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/clip_based 2024-04-02T19:18:58,882 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/clip_based/reference.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/clip_based 2024-04-02T19:18:58,884 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/clip_based/roc.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/clip_based 2024-04-02T19:18:58,886 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/clip_based/intermediate_statistics.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/clip_based 2024-04-02T19:18:58,888 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/clip_based/precision_recall.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/clip_based 2024-04-02T19:18:58,891 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/clip_based/__init__.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/clip_based 2024-04-02T19:18:58,893 creating build/bdist.linux-armv7l/wheel/sed_scores_eval/utils 2024-04-02T19:18:58,895 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/utils/parallel.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/utils 2024-04-02T19:18:58,897 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/utils/nested.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/utils 2024-04-02T19:18:58,899 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/utils/visualization.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/utils 2024-04-02T19:18:58,901 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/utils/__init__.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/utils 2024-04-02T19:18:58,903 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/utils/test.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/utils 2024-04-02T19:18:58,905 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/utils/array_ops.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/utils 2024-04-02T19:18:58,907 creating build/bdist.linux-armv7l/wheel/sed_scores_eval/collar_based 2024-04-02T19:18:58,908 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/collar_based/error_rate.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/collar_based 2024-04-02T19:18:58,911 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/collar_based/reference.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/collar_based 2024-04-02T19:18:58,913 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/collar_based/intermediate_statistics.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/collar_based 2024-04-02T19:18:58,916 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/collar_based/precision_recall.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/collar_based 2024-04-02T19:18:58,919 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/collar_based/__init__.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/collar_based 2024-04-02T19:18:58,921 creating build/bdist.linux-armv7l/wheel/sed_scores_eval/intersection_based 2024-04-02T19:18:58,922 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/intersection_based/error_rate.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/intersection_based 2024-04-02T19:18:58,925 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/intersection_based/reference.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/intersection_based 2024-04-02T19:18:58,928 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/intersection_based/pipsds.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/intersection_based 2024-04-02T19:18:58,931 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/intersection_based/intermediate_statistics.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/intersection_based 2024-04-02T19:18:58,933 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/intersection_based/precision_recall.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/intersection_based 2024-04-02T19:18:58,936 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/intersection_based/__init__.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/intersection_based 2024-04-02T19:18:58,938 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/intersection_based/psds.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/intersection_based 2024-04-02T19:18:58,942 creating build/bdist.linux-armv7l/wheel/sed_scores_eval/base_modules 2024-04-02T19:18:58,943 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules/error_rate.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/base_modules 2024-04-02T19:18:58,945 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules/io.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/base_modules 2024-04-02T19:18:58,948 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules/bootstrap.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/base_modules 2024-04-02T19:18:58,950 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules/curves.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/base_modules 2024-04-02T19:18:58,953 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules/ground_truth.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/base_modules 2024-04-02T19:18:58,955 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules/scores.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/base_modules 2024-04-02T19:18:58,958 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules/cy_detection.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/sed_scores_eval/base_modules 2024-04-02T19:18:58,974 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules/roc.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/base_modules 2024-04-02T19:18:58,976 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules/cy_medfilt.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/sed_scores_eval/base_modules 2024-04-02T19:18:59,002 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules/precision_recall.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/base_modules 2024-04-02T19:18:59,005 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules/__init__.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/base_modules 2024-04-02T19:18:59,006 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules/statistics.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/base_modules 2024-04-02T19:18:59,009 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules/detection.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/base_modules 2024-04-02T19:18:59,012 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules/cy_medfilt.pyx -> build/bdist.linux-armv7l/wheel/sed_scores_eval/base_modules 2024-04-02T19:18:59,015 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules/cy_detection.pyx -> build/bdist.linux-armv7l/wheel/sed_scores_eval/base_modules 2024-04-02T19:18:59,017 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/base_modules/postprocessing.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval/base_modules 2024-04-02T19:18:59,019 copying build/lib.linux-armv7l-cpython-311/sed_scores_eval/__init__.py -> build/bdist.linux-armv7l/wheel/sed_scores_eval 2024-04-02T19:18:59,021 running install_egg_info 2024-04-02T19:18:59,084 running egg_info 2024-04-02T19:18:59,109 writing sed_scores_eval.egg-info/PKG-INFO 2024-04-02T19:18:59,115 writing dependency_links to sed_scores_eval.egg-info/dependency_links.txt 2024-04-02T19:18:59,118 writing requirements to sed_scores_eval.egg-info/requires.txt 2024-04-02T19:18:59,119 writing top-level names to sed_scores_eval.egg-info/top_level.txt 2024-04-02T19:18:59,162 reading manifest file 'sed_scores_eval.egg-info/SOURCES.txt' 2024-04-02T19:18:59,165 adding license file 'LICENSE' 2024-04-02T19:18:59,169 writing manifest file 'sed_scores_eval.egg-info/SOURCES.txt' 2024-04-02T19:18:59,171 Copying sed_scores_eval.egg-info to build/bdist.linux-armv7l/wheel/sed_scores_eval-0.0.2-py3.11.egg-info 2024-04-02T19:18:59,182 running install_scripts 2024-04-02T19:18:59,239 creating build/bdist.linux-armv7l/wheel/sed_scores_eval-0.0.2.dist-info/WHEEL 2024-04-02T19:18:59,242 creating '/tmp/pip-wheel-d7rskt5q/sed_scores_eval-0.0.2-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-04-02T19:18:59,245 adding 'sed_scores_eval/__init__.py' 2024-04-02T19:18:59,247 adding 'sed_scores_eval/base_modules/__init__.py' 2024-04-02T19:18:59,249 adding 'sed_scores_eval/base_modules/bootstrap.py' 2024-04-02T19:18:59,251 adding 'sed_scores_eval/base_modules/curves.py' 2024-04-02T19:18:59,460 adding 'sed_scores_eval/base_modules/cy_detection.cpython-311-arm-linux-gnueabihf.so' 2024-04-02T19:18:59,468 adding 'sed_scores_eval/base_modules/cy_detection.pyx' 2024-04-02T19:18:59,739 adding 'sed_scores_eval/base_modules/cy_medfilt.cpython-311-arm-linux-gnueabihf.so' 2024-04-02T19:18:59,750 adding 'sed_scores_eval/base_modules/cy_medfilt.pyx' 2024-04-02T19:18:59,752 adding 'sed_scores_eval/base_modules/detection.py' 2024-04-02T19:18:59,754 adding 'sed_scores_eval/base_modules/error_rate.py' 2024-04-02T19:18:59,756 adding 'sed_scores_eval/base_modules/ground_truth.py' 2024-04-02T19:18:59,760 adding 'sed_scores_eval/base_modules/io.py' 2024-04-02T19:18:59,762 adding 'sed_scores_eval/base_modules/postprocessing.py' 2024-04-02T19:18:59,764 adding 'sed_scores_eval/base_modules/precision_recall.py' 2024-04-02T19:18:59,766 adding 'sed_scores_eval/base_modules/roc.py' 2024-04-02T19:18:59,768 adding 'sed_scores_eval/base_modules/scores.py' 2024-04-02T19:18:59,771 adding 'sed_scores_eval/base_modules/statistics.py' 2024-04-02T19:18:59,773 adding 'sed_scores_eval/clip_based/__init__.py' 2024-04-02T19:18:59,775 adding 'sed_scores_eval/clip_based/error_rate.py' 2024-04-02T19:18:59,777 adding 'sed_scores_eval/clip_based/intermediate_statistics.py' 2024-04-02T19:18:59,779 adding 'sed_scores_eval/clip_based/precision_recall.py' 2024-04-02T19:18:59,781 adding 'sed_scores_eval/clip_based/reference.py' 2024-04-02T19:18:59,783 adding 'sed_scores_eval/clip_based/roc.py' 2024-04-02T19:18:59,785 adding 'sed_scores_eval/collar_based/__init__.py' 2024-04-02T19:18:59,787 adding 'sed_scores_eval/collar_based/error_rate.py' 2024-04-02T19:18:59,789 adding 'sed_scores_eval/collar_based/intermediate_statistics.py' 2024-04-02T19:18:59,792 adding 'sed_scores_eval/collar_based/precision_recall.py' 2024-04-02T19:18:59,793 adding 'sed_scores_eval/collar_based/reference.py' 2024-04-02T19:18:59,796 adding 'sed_scores_eval/intersection_based/__init__.py' 2024-04-02T19:18:59,798 adding 'sed_scores_eval/intersection_based/error_rate.py' 2024-04-02T19:18:59,800 adding 'sed_scores_eval/intersection_based/intermediate_statistics.py' 2024-04-02T19:18:59,803 adding 'sed_scores_eval/intersection_based/pipsds.py' 2024-04-02T19:18:59,805 adding 'sed_scores_eval/intersection_based/precision_recall.py' 2024-04-02T19:18:59,808 adding 'sed_scores_eval/intersection_based/psds.py' 2024-04-02T19:18:59,810 adding 'sed_scores_eval/intersection_based/reference.py' 2024-04-02T19:18:59,813 adding 'sed_scores_eval/segment_based/__init__.py' 2024-04-02T19:18:59,815 adding 'sed_scores_eval/segment_based/error_rate.py' 2024-04-02T19:18:59,817 adding 'sed_scores_eval/segment_based/intermediate_statistics.py' 2024-04-02T19:18:59,819 adding 'sed_scores_eval/segment_based/precision_recall.py' 2024-04-02T19:18:59,821 adding 'sed_scores_eval/segment_based/reference.py' 2024-04-02T19:18:59,823 adding 'sed_scores_eval/segment_based/roc.py' 2024-04-02T19:18:59,825 adding 'sed_scores_eval/utils/__init__.py' 2024-04-02T19:18:59,827 adding 'sed_scores_eval/utils/array_ops.py' 2024-04-02T19:18:59,828 adding 'sed_scores_eval/utils/nested.py' 2024-04-02T19:18:59,830 adding 'sed_scores_eval/utils/parallel.py' 2024-04-02T19:18:59,832 adding 'sed_scores_eval/utils/test.py' 2024-04-02T19:18:59,833 adding 'sed_scores_eval/utils/visualization.py' 2024-04-02T19:18:59,836 adding 'sed_scores_eval-0.0.2.dist-info/LICENSE' 2024-04-02T19:18:59,838 adding 'sed_scores_eval-0.0.2.dist-info/METADATA' 2024-04-02T19:18:59,839 adding 'sed_scores_eval-0.0.2.dist-info/WHEEL' 2024-04-02T19:18:59,841 adding 'sed_scores_eval-0.0.2.dist-info/top_level.txt' 2024-04-02T19:18:59,843 adding 'sed_scores_eval-0.0.2.dist-info/RECORD' 2024-04-02T19:18:59,862 removing build/bdist.linux-armv7l/wheel 2024-04-02T19:19:00,059 Building wheel for sed-scores-eval (setup.py): finished with status 'done' 2024-04-02T19:19:00,072 Created wheel for sed-scores-eval: filename=sed_scores_eval-0.0.2-cp311-cp311-linux_armv7l.whl size=1035016 sha256=40cab770977353aa8410dd09f3ed0aeacb6709836b197c59bbddeb3d3c2145da 2024-04-02T19:19:00,074 Stored in directory: /tmp/pip-ephem-wheel-cache-0te4p286/wheels/0c/87/91/0c9c0f2e7002b27f6f30599e0f0fe4db8039cfbeb369ee066f 2024-04-02T19:19:00,087 Successfully built sed-scores-eval 2024-04-02T19:19:00,127 Removed build tracker: '/tmp/pip-build-tracker-sccammot'