2024-04-04T22:23:24,473 Created temporary directory: /tmp/pip-build-tracker-7u_nj09x 2024-04-04T22:23:24,475 Initialized build tracking at /tmp/pip-build-tracker-7u_nj09x 2024-04-04T22:23:24,475 Created build tracker: /tmp/pip-build-tracker-7u_nj09x 2024-04-04T22:23:24,476 Entered build tracker: /tmp/pip-build-tracker-7u_nj09x 2024-04-04T22:23:24,477 Created temporary directory: /tmp/pip-wheel-r9jk2fx2 2024-04-04T22:23:24,480 Created temporary directory: /tmp/pip-ephem-wheel-cache-kr_rmw80 2024-04-04T22:23:24,504 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-04-04T22:23:24,507 2 location(s) to search for versions of biomero: 2024-04-04T22:23:24,507 * https://pypi.org/simple/biomero/ 2024-04-04T22:23:24,507 * https://www.piwheels.org/simple/biomero/ 2024-04-04T22:23:24,508 Fetching project page and analyzing links: https://pypi.org/simple/biomero/ 2024-04-04T22:23:24,509 Getting page https://pypi.org/simple/biomero/ 2024-04-04T22:23:24,511 Found index url https://pypi.org/simple/ 2024-04-04T22:23:24,726 Fetched page https://pypi.org/simple/biomero/ as application/vnd.pypi.simple.v1+json 2024-04-04T22:23:24,730 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/62/48/c77a7d502ed23e824988527ffe744d77ec3692bf373f5dffb6406149f55e/biomero-1.2.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-04-04T22:23:24,731 Found link https://files.pythonhosted.org/packages/37/4b/4934e30b8ac7f859e20ce2f33ebb9d9de0c2611fd419587e840b457da994/biomero-1.2.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.2.0 2024-04-04T22:23:24,732 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/ba/59/df01007bae6d10f7a894eb8f067b19a6fc1c85cef3621532c552c8a5d83c/biomero-1.3.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-04-04T22:23:24,733 Found link https://files.pythonhosted.org/packages/93/66/6f3ba130c6ab15b10a0fc92683db7f8a6d0a60df0c00311f3011d8801db2/biomero-1.3.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.3.0 2024-04-04T22:23:24,734 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/97/35/d6b2ca0b76deaab237094daa9fb4b6c86df67ef59f07510c101082235d8d/biomero-1.4.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-04-04T22:23:24,735 Found link https://files.pythonhosted.org/packages/72/2d/612e4f8aedcfd6a0aca21b7896a9ca74e18fdbc382538f411fbe4e403fe4/biomero-1.4.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.4.0 2024-04-04T22:23:24,735 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/f2/2a/58f8f3897d6bfffb13375cb3f67dc4776773852b6cb89c00b45317a93854/biomero-1.5.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-04-04T22:23:24,737 Found link https://files.pythonhosted.org/packages/22/5d/beb526e718ea20582a7a10ef277d10f2907723f2dd0bf57465a8f406f27e/biomero-1.5.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.5.0 2024-04-04T22:23:24,737 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/03/8f/4f9506b39fa51bf565e2354dc887ec53ede58150a86a18b92f6bfd8c72a8/biomero-1.5.1-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-04-04T22:23:24,738 Found link https://files.pythonhosted.org/packages/98/96/a628cef6b3ed1f89ab3bca30285b46e477bb01bd7fdf6a63e68a0f85c769/biomero-1.5.1.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.5.1 2024-04-04T22:23:24,739 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/ab/be/922b8b35d2c4a9c317c1095c71c1bcc74443be8f04b2a6ac85cbc2892a78/biomero-1.6.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-04-04T22:23:24,740 Found link https://files.pythonhosted.org/packages/7c/dc/65d7e481ab81cb06ce680bbe77a95f336261381813135dbc6aa0f0cdb1e3/biomero-1.6.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.6.0 2024-04-04T22:23:24,741 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/93/eb/9d2f80d33477bd9d6299ad0b29898a77c18e449e9bfa6c3656562a3f69b9/biomero-1.7.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-04-04T22:23:24,742 Found link https://files.pythonhosted.org/packages/e1/9e/104955b6bb3f34d32fde7b9d1f4be5d5f46a45b25afbee449ac44c905a72/biomero-1.7.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.7.0 2024-04-04T22:23:24,742 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/39/f4/ca212a8abbb68d2c32d48cab43cf6fe1622a5317a4e4300154dafe9b9862/biomero-1.7.1-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-04-04T22:23:24,743 Found link https://files.pythonhosted.org/packages/b5/28/c5ae875aa13bd7c8c9aec910812c2fd816fffd196d65f63b8a142181fd33/biomero-1.7.1.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.7.1 2024-04-04T22:23:24,744 Skipping link: No binaries permitted for biomero: https://files.pythonhosted.org/packages/21/d9/c167814a1abc31271e77ad77422f04554cd41b18f62572e12c4f57e0d446/biomero-1.8.0-py3-none-any.whl (from https://pypi.org/simple/biomero/) (requires-python:>=3.7) 2024-04-04T22:23:24,745 Found link https://files.pythonhosted.org/packages/c4/f3/5e41f475114acc86b9c5fc20fe702136efe2cfd9a93d877db1b6dd619297/biomero-1.8.0.tar.gz (from https://pypi.org/simple/biomero/) (requires-python:>=3.7), version: 1.8.0 2024-04-04T22:23:24,746 Fetching project page and analyzing links: https://www.piwheels.org/simple/biomero/ 2024-04-04T22:23:24,746 Getting page https://www.piwheels.org/simple/biomero/ 2024-04-04T22:23:24,748 Found index url https://www.piwheels.org/simple/ 2024-04-04T22:23:25,129 Fetched page https://www.piwheels.org/simple/biomero/ as text/html 2024-04-04T22:23:25,133 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.7.0-py3-none-any.whl#sha256=df715c10bf0a3fe33bd73a44c98bf4b4b75bf0c70d3deb65f4dda3d3813b85e1 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-04-04T22:23:25,133 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.6.0-py3-none-any.whl#sha256=f881953b98a86ee2c1508c007dec8ba9b09f98951d65e81405903f1b4efc8515 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-04-04T22:23:25,134 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.5.1-py3-none-any.whl#sha256=419f808c9c52525df6108fbd48d53e82cc965e9857500c4544041a791dd4d65e (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-04-04T22:23:25,135 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.5.0-py3-none-any.whl#sha256=da32037e690913b648bc08b4cf95219e51618920116abdb024914dc4b29393fd (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-04-04T22:23:25,135 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.4.0-py3-none-any.whl#sha256=06a09b9974b9782c3d527bf0ab8d67349261b9af71c6aa3ebf12f342eddd9286 (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-04-04T22:23:25,136 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.3.0-py3-none-any.whl#sha256=e87fb4e5b3565cfa3b27830d8d1d1bff5c1054bfb032d2e6055e966ef84df39d (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-04-04T22:23:25,136 Skipping link: No binaries permitted for biomero: https://www.piwheels.org/simple/biomero/biomero-1.2.0-py3-none-any.whl#sha256=0a3d446aaed8e43c191ec7b78fd1731e91935fd1e432bde72a96689be19f8dbf (from https://www.piwheels.org/simple/biomero/) (requires-python:>=3.7) 2024-04-04T22:23:25,137 Skipping link: not a file: https://www.piwheels.org/simple/biomero/ 2024-04-04T22:23:25,138 Skipping link: not a file: https://pypi.org/simple/biomero/ 2024-04-04T22:23:25,157 Given no hashes to check 1 links for project 'biomero': discarding no candidates 2024-04-04T22:23:25,176 Collecting biomero==1.7.1 2024-04-04T22:23:25,178 Created temporary directory: /tmp/pip-unpack-ryfh3qh9 2024-04-04T22:23:25,392 Downloading biomero-1.7.1.tar.gz (1.1 MB) 2024-04-04T22:23:25,817 Added biomero==1.7.1 from https://files.pythonhosted.org/packages/b5/28/c5ae875aa13bd7c8c9aec910812c2fd816fffd196d65f63b8a142181fd33/biomero-1.7.1.tar.gz to build tracker '/tmp/pip-build-tracker-7u_nj09x' 2024-04-04T22:23:25,824 Created temporary directory: /tmp/pip-build-env-r9r5i_ev 2024-04-04T22:23:25,829 Installing build dependencies: started 2024-04-04T22:23:25,831 Running command pip subprocess to install build dependencies 2024-04-04T22:23:27,014 Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-04-04T22:23:28,018 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-04-04T22:23:29,872 Collecting setuptools>=45 2024-04-04T22:23:29,886 Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.2.0-py3-none-any.whl (821 kB) 2024-04-04T22:23:30,202 Collecting setuptools_scm>=6.2 (from setuptools_scm[toml]>=6.2) 2024-04-04T22:23:30,222 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-8.0.4-py3-none-any.whl (42 kB) 2024-04-04T22:23:30,576 Collecting packaging>=20 (from setuptools_scm>=6.2->setuptools_scm[toml]>=6.2) 2024-04-04T22:23:30,592 Using cached https://www.piwheels.org/simple/packaging/packaging-24.0-py3-none-any.whl (53 kB) 2024-04-04T22:23:30,717 Collecting typing-extensions (from setuptools_scm>=6.2->setuptools_scm[toml]>=6.2) 2024-04-04T22:23:30,732 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.10.0-py3-none-any.whl (33 kB) 2024-04-04T22:23:33,291 Installing collected packages: typing-extensions, setuptools, packaging, setuptools_scm 2024-04-04T22:23:36,406 Successfully installed packaging-24.0 setuptools-69.2.0 setuptools_scm-8.0.4 typing-extensions-4.10.0 2024-04-04T22:23:37,031 Installing build dependencies: finished with status 'done' 2024-04-04T22:23:37,034 Getting requirements to build wheel: started 2024-04-04T22:23:37,036 Running command Getting requirements to build wheel 2024-04-04T22:23:37,933 running egg_info 2024-04-04T22:23:37,938 writing biomero.egg-info/PKG-INFO 2024-04-04T22:23:37,944 writing dependency_links to biomero.egg-info/dependency_links.txt 2024-04-04T22:23:37,946 writing requirements to biomero.egg-info/requires.txt 2024-04-04T22:23:37,947 writing top-level names to biomero.egg-info/top_level.txt 2024-04-04T22:23:37,991 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-04-04T22:23:37,994 reading manifest file 'biomero.egg-info/SOURCES.txt' 2024-04-04T22:23:37,997 reading manifest template 'MANIFEST.in' 2024-04-04T22:23:38,006 adding license file 'LICENSE' 2024-04-04T22:23:38,009 writing manifest file 'biomero.egg-info/SOURCES.txt' 2024-04-04T22:23:38,127 Getting requirements to build wheel: finished with status 'done' 2024-04-04T22:23:38,140 Installing backend dependencies: started 2024-04-04T22:23:38,141 Running command pip subprocess to install backend dependencies 2024-04-04T22:23:39,398 Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-04-04T22:23:40,079 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-04-04T22:23:40,816 Collecting wheel 2024-04-04T22:23:40,833 Using cached https://www.piwheels.org/simple/wheel/wheel-0.43.0-py3-none-any.whl (65 kB) 2024-04-04T22:23:43,111 Installing collected packages: wheel 2024-04-04T22:23:43,351 Creating /tmp/pip-build-env-r9r5i_ev/normal/local/bin 2024-04-04T22:23:43,353 changing mode of /tmp/pip-build-env-r9r5i_ev/normal/local/bin/wheel to 755 2024-04-04T22:23:43,365 Successfully installed wheel-0.43.0 2024-04-04T22:23:43,898 Installing backend dependencies: finished with status 'done' 2024-04-04T22:23:43,900 Created temporary directory: /tmp/pip-modern-metadata-si7rh_c0 2024-04-04T22:23:43,902 Preparing metadata (pyproject.toml): started 2024-04-04T22:23:43,903 Running command Preparing metadata (pyproject.toml) 2024-04-04T22:23:44,805 running dist_info 2024-04-04T22:23:44,812 creating /tmp/pip-modern-metadata-si7rh_c0/biomero.egg-info 2024-04-04T22:23:44,818 writing /tmp/pip-modern-metadata-si7rh_c0/biomero.egg-info/PKG-INFO 2024-04-04T22:23:44,824 writing dependency_links to /tmp/pip-modern-metadata-si7rh_c0/biomero.egg-info/dependency_links.txt 2024-04-04T22:23:44,826 writing requirements to /tmp/pip-modern-metadata-si7rh_c0/biomero.egg-info/requires.txt 2024-04-04T22:23:44,827 writing top-level names to /tmp/pip-modern-metadata-si7rh_c0/biomero.egg-info/top_level.txt 2024-04-04T22:23:44,829 writing manifest file '/tmp/pip-modern-metadata-si7rh_c0/biomero.egg-info/SOURCES.txt' 2024-04-04T22:23:44,870 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-04-04T22:23:44,875 reading manifest file '/tmp/pip-modern-metadata-si7rh_c0/biomero.egg-info/SOURCES.txt' 2024-04-04T22:23:44,877 reading manifest template 'MANIFEST.in' 2024-04-04T22:23:44,886 adding license file 'LICENSE' 2024-04-04T22:23:44,888 writing manifest file '/tmp/pip-modern-metadata-si7rh_c0/biomero.egg-info/SOURCES.txt' 2024-04-04T22:23:44,889 creating '/tmp/pip-modern-metadata-si7rh_c0/biomero-1.7.1.dist-info' 2024-04-04T22:23:45,057 Preparing metadata (pyproject.toml): finished with status 'done' 2024-04-04T22:23:45,065 Source in /tmp/pip-wheel-r9jk2fx2/biomero_45ccd5621f394b2a9c118cefe477c12d has version 1.7.1, which satisfies requirement biomero==1.7.1 from https://files.pythonhosted.org/packages/b5/28/c5ae875aa13bd7c8c9aec910812c2fd816fffd196d65f63b8a142181fd33/biomero-1.7.1.tar.gz 2024-04-04T22:23:45,066 Removed biomero==1.7.1 from https://files.pythonhosted.org/packages/b5/28/c5ae875aa13bd7c8c9aec910812c2fd816fffd196d65f63b8a142181fd33/biomero-1.7.1.tar.gz from build tracker '/tmp/pip-build-tracker-7u_nj09x' 2024-04-04T22:23:45,078 Created temporary directory: /tmp/pip-unpack-obri1iq7 2024-04-04T22:23:45,079 Created temporary directory: /tmp/pip-unpack-y_zf2a_c 2024-04-04T22:23:45,100 Building wheels for collected packages: biomero 2024-04-04T22:23:45,104 Created temporary directory: /tmp/pip-wheel-83lgexj5 2024-04-04T22:23:45,105 Destination directory: /tmp/pip-wheel-83lgexj5 2024-04-04T22:23:45,107 Building wheel for biomero (pyproject.toml): started 2024-04-04T22:23:45,108 Running command Building wheel for biomero (pyproject.toml) 2024-04-04T22:23:46,165 running bdist_wheel 2024-04-04T22:23:46,188 running build 2024-04-04T22:23:46,188 running build_py 2024-04-04T22:23:46,195 creating build 2024-04-04T22:23:46,196 creating build/lib 2024-04-04T22:23:46,196 creating build/lib/resources 2024-04-04T22:23:46,198 copying resources/convert_zarr_to_tiff.py -> build/lib/resources 2024-04-04T22:23:46,200 copying resources/__init__.py -> build/lib/resources 2024-04-04T22:23:46,203 creating build/lib/docs 2024-04-04T22:23:46,204 copying docs/conf.py -> build/lib/docs 2024-04-04T22:23:46,206 creating build/lib/biomero 2024-04-04T22:23:46,207 copying biomero/slurm_client.py -> build/lib/biomero 2024-04-04T22:23:46,213 copying biomero/constants.py -> build/lib/biomero 2024-04-04T22:23:46,216 copying biomero/__init__.py -> build/lib/biomero 2024-04-04T22:23:46,218 creating build/lib/tests 2024-04-04T22:23:46,218 creating build/lib/tests/unit 2024-04-04T22:23:46,220 copying tests/unit/test_slurm_client.py -> build/lib/tests/unit 2024-04-04T22:23:46,223 copying tests/unit/__init__.py -> build/lib/tests/unit 2024-04-04T22:23:46,225 creating build/lib/tests/integration 2024-04-04T22:23:46,226 copying tests/integration/__init__.py -> build/lib/tests/integration 2024-04-04T22:23:46,229 running egg_info 2024-04-04T22:23:46,234 writing biomero.egg-info/PKG-INFO 2024-04-04T22:23:46,240 writing dependency_links to biomero.egg-info/dependency_links.txt 2024-04-04T22:23:46,241 writing requirements to biomero.egg-info/requires.txt 2024-04-04T22:23:46,242 writing top-level names to biomero.egg-info/top_level.txt 2024-04-04T22:23:46,275 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-04-04T22:23:46,278 reading manifest file 'biomero.egg-info/SOURCES.txt' 2024-04-04T22:23:46,283 reading manifest template 'MANIFEST.in' 2024-04-04T22:23:46,293 adding license file 'LICENSE' 2024-04-04T22:23:46,296 writing manifest file 'biomero.egg-info/SOURCES.txt' 2024-04-04T22:23:46,303 copying resources/convert_job_array.sh -> build/lib/resources 2024-04-04T22:23:46,305 copying resources/convert_zarr_to_tiff.def -> build/lib/resources 2024-04-04T22:23:46,307 copying resources/example.config -> build/lib/resources 2024-04-04T22:23:46,309 copying resources/job_template.sh -> build/lib/resources 2024-04-04T22:23:46,311 copying resources/pull_images.sh -> build/lib/resources 2024-04-04T22:23:46,313 copying resources/slurm-config.ini -> build/lib/resources 2024-04-04T22:23:46,316 copying docs/Makefile -> build/lib/docs 2024-04-04T22:23:46,318 copying docs/index.rst -> build/lib/docs 2024-04-04T22:23:46,320 copying docs/make.bat -> build/lib/docs 2024-04-04T22:23:46,322 copying docs/modules.rst -> build/lib/docs 2024-04-04T22:23:46,324 copying docs/omero_slurm_client.rst -> build/lib/docs 2024-04-04T22:23:46,326 copying docs/readme_link.md -> build/lib/docs 2024-04-04T22:23:46,328 copying docs/requirements.txt -> build/lib/docs 2024-04-04T22:23:46,331 copying docs/tutorial_link.md -> build/lib/docs 2024-04-04T22:23:46,333 creating build/lib/resources/tutorials 2024-04-04T22:23:46,334 copying resources/tutorials/tutorial_Azure_slurm.md -> build/lib/resources/tutorials 2024-04-04T22:23:46,337 copying resources/tutorials/tutorial_GoogleCloud_slurm.md -> build/lib/resources/tutorials 2024-04-04T22:23:46,340 copying resources/tutorials/tutorial_cellexpansion.md -> build/lib/resources/tutorials 2024-04-04T22:23:46,343 copying resources/tutorials/tutorial_cellprofiler.md -> build/lib/resources/tutorials 2024-04-04T22:23:46,347 copying resources/tutorials/tutorial_local_slurm.md -> build/lib/resources/tutorials 2024-04-04T22:23:46,350 creating build/lib/resources/tutorials/images 2024-04-04T22:23:46,351 copying resources/tutorials/images/Cells.tif -> build/lib/resources/tutorials/images 2024-04-04T22:23:46,361 copying resources/tutorials/images/cellexpansion.png -> build/lib/resources/tutorials/images 2024-04-04T22:23:46,372 copying resources/tutorials/images/gc_allow_ssh.PNG -> build/lib/resources/tutorials/images 2024-04-04T22:23:46,377 copying resources/tutorials/images/nuclei_labels.png -> build/lib/resources/tutorials/images 2024-04-04T22:23:46,407 copying resources/tutorials/images/webclient_init_env.PNG -> build/lib/resources/tutorials/images 2024-04-04T22:23:46,410 copying resources/tutorials/images/webclient_init_env_done.PNG -> build/lib/resources/tutorials/images 2024-04-04T22:23:46,413 copying resources/tutorials/images/webclient_run_cellpose.PNG -> build/lib/resources/tutorials/images 2024-04-04T22:23:46,417 copying resources/tutorials/images/webclient_run_workflow.PNG -> build/lib/resources/tutorials/images 2024-04-04T22:23:46,433 installing to build/bdist.linux-armv7l/wheel 2024-04-04T22:23:46,434 running install 2024-04-04T22:23:46,458 running install_lib 2024-04-04T22:23:46,465 creating build/bdist.linux-armv7l 2024-04-04T22:23:46,465 creating build/bdist.linux-armv7l/wheel 2024-04-04T22:23:46,468 creating build/bdist.linux-armv7l/wheel/tests 2024-04-04T22:23:46,470 creating build/bdist.linux-armv7l/wheel/tests/unit 2024-04-04T22:23:46,471 copying build/lib/tests/unit/test_slurm_client.py -> build/bdist.linux-armv7l/wheel/tests/unit 2024-04-04T22:23:46,476 copying build/lib/tests/unit/__init__.py -> build/bdist.linux-armv7l/wheel/tests/unit 2024-04-04T22:23:46,478 creating build/bdist.linux-armv7l/wheel/tests/integration 2024-04-04T22:23:46,479 copying build/lib/tests/integration/__init__.py -> build/bdist.linux-armv7l/wheel/tests/integration 2024-04-04T22:23:46,481 creating build/bdist.linux-armv7l/wheel/resources 2024-04-04T22:23:46,482 copying build/lib/resources/convert_zarr_to_tiff.py -> build/bdist.linux-armv7l/wheel/resources 2024-04-04T22:23:46,484 copying build/lib/resources/example.config -> build/bdist.linux-armv7l/wheel/resources 2024-04-04T22:23:46,486 copying build/lib/resources/__init__.py -> build/bdist.linux-armv7l/wheel/resources 2024-04-04T22:23:46,487 copying build/lib/resources/convert_job_array.sh -> build/bdist.linux-armv7l/wheel/resources 2024-04-04T22:23:46,489 copying build/lib/resources/pull_images.sh -> build/bdist.linux-armv7l/wheel/resources 2024-04-04T22:23:46,491 copying build/lib/resources/job_template.sh -> build/bdist.linux-armv7l/wheel/resources 2024-04-04T22:23:46,493 copying build/lib/resources/slurm-config.ini -> build/bdist.linux-armv7l/wheel/resources 2024-04-04T22:23:46,496 creating build/bdist.linux-armv7l/wheel/resources/tutorials 2024-04-04T22:23:46,497 copying build/lib/resources/tutorials/tutorial_cellexpansion.md -> build/bdist.linux-armv7l/wheel/resources/tutorials 2024-04-04T22:23:46,499 copying build/lib/resources/tutorials/tutorial_cellprofiler.md -> build/bdist.linux-armv7l/wheel/resources/tutorials 2024-04-04T22:23:46,503 copying build/lib/resources/tutorials/tutorial_local_slurm.md -> build/bdist.linux-armv7l/wheel/resources/tutorials 2024-04-04T22:23:46,506 copying build/lib/resources/tutorials/tutorial_Azure_slurm.md -> build/bdist.linux-armv7l/wheel/resources/tutorials 2024-04-04T22:23:46,509 copying build/lib/resources/tutorials/tutorial_GoogleCloud_slurm.md -> build/bdist.linux-armv7l/wheel/resources/tutorials 2024-04-04T22:23:46,513 creating build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-04-04T22:23:46,513 copying build/lib/resources/tutorials/images/webclient_run_workflow.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-04-04T22:23:46,518 copying build/lib/resources/tutorials/images/cellexpansion.png -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-04-04T22:23:46,548 copying build/lib/resources/tutorials/images/Cells.tif -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-04-04T22:23:46,564 copying build/lib/resources/tutorials/images/webclient_run_cellpose.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-04-04T22:23:46,567 copying build/lib/resources/tutorials/images/webclient_init_env.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-04-04T22:23:46,570 copying build/lib/resources/tutorials/images/nuclei_labels.png -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-04-04T22:23:46,582 copying build/lib/resources/tutorials/images/webclient_init_env_done.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-04-04T22:23:46,586 copying build/lib/resources/tutorials/images/gc_allow_ssh.PNG -> build/bdist.linux-armv7l/wheel/resources/tutorials/images 2024-04-04T22:23:46,593 copying build/lib/resources/convert_zarr_to_tiff.def -> build/bdist.linux-armv7l/wheel/resources 2024-04-04T22:23:46,597 creating build/bdist.linux-armv7l/wheel/docs 2024-04-04T22:23:46,598 copying build/lib/docs/modules.rst -> build/bdist.linux-armv7l/wheel/docs 2024-04-04T22:23:46,601 copying build/lib/docs/index.rst -> build/bdist.linux-armv7l/wheel/docs 2024-04-04T22:23:46,603 copying build/lib/docs/conf.py -> build/bdist.linux-armv7l/wheel/docs 2024-04-04T22:23:46,605 copying build/lib/docs/readme_link.md -> build/bdist.linux-armv7l/wheel/docs 2024-04-04T22:23:46,607 copying build/lib/docs/requirements.txt -> build/bdist.linux-armv7l/wheel/docs 2024-04-04T22:23:46,609 copying build/lib/docs/Makefile -> build/bdist.linux-armv7l/wheel/docs 2024-04-04T22:23:46,610 copying build/lib/docs/make.bat -> build/bdist.linux-armv7l/wheel/docs 2024-04-04T22:23:46,613 copying build/lib/docs/tutorial_link.md -> build/bdist.linux-armv7l/wheel/docs 2024-04-04T22:23:46,614 copying build/lib/docs/omero_slurm_client.rst -> build/bdist.linux-armv7l/wheel/docs 2024-04-04T22:23:46,617 creating build/bdist.linux-armv7l/wheel/biomero 2024-04-04T22:23:46,617 copying build/lib/biomero/slurm_client.py -> build/bdist.linux-armv7l/wheel/biomero 2024-04-04T22:23:46,623 copying build/lib/biomero/constants.py -> build/bdist.linux-armv7l/wheel/biomero 2024-04-04T22:23:46,625 copying build/lib/biomero/__init__.py -> build/bdist.linux-armv7l/wheel/biomero 2024-04-04T22:23:46,627 running install_egg_info 2024-04-04T22:23:46,632 Copying biomero.egg-info to build/bdist.linux-armv7l/wheel/biomero-1.7.1-py3.11.egg-info 2024-04-04T22:23:46,646 running install_scripts 2024-04-04T22:23:46,669 creating build/bdist.linux-armv7l/wheel/biomero-1.7.1.dist-info/WHEEL 2024-04-04T22:23:46,671 creating '/tmp/pip-wheel-83lgexj5/.tmp-is_s04i9/biomero-1.7.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-04-04T22:23:46,674 adding 'biomero/__init__.py' 2024-04-04T22:23:46,675 adding 'biomero/constants.py' 2024-04-04T22:23:46,684 adding 'biomero/slurm_client.py' 2024-04-04T22:23:46,688 adding 'docs/Makefile' 2024-04-04T22:23:46,690 adding 'docs/conf.py' 2024-04-04T22:23:46,691 adding 'docs/index.rst' 2024-04-04T22:23:46,692 adding 'docs/make.bat' 2024-04-04T22:23:46,694 adding 'docs/modules.rst' 2024-04-04T22:23:46,695 adding 'docs/omero_slurm_client.rst' 2024-04-04T22:23:46,696 adding 'docs/readme_link.md' 2024-04-04T22:23:46,698 adding 'docs/requirements.txt' 2024-04-04T22:23:46,699 adding 'docs/tutorial_link.md' 2024-04-04T22:23:46,701 adding 'resources/__init__.py' 2024-04-04T22:23:46,703 adding 'resources/convert_job_array.sh' 2024-04-04T22:23:46,704 adding 'resources/convert_zarr_to_tiff.def' 2024-04-04T22:23:46,706 adding 'resources/convert_zarr_to_tiff.py' 2024-04-04T22:23:46,707 adding 'resources/example.config' 2024-04-04T22:23:46,709 adding 'resources/job_template.sh' 2024-04-04T22:23:46,710 adding 'resources/pull_images.sh' 2024-04-04T22:23:46,712 adding 'resources/slurm-config.ini' 2024-04-04T22:23:46,716 adding 'resources/tutorials/tutorial_Azure_slurm.md' 2024-04-04T22:23:46,719 adding 'resources/tutorials/tutorial_GoogleCloud_slurm.md' 2024-04-04T22:23:46,720 adding 'resources/tutorials/tutorial_cellexpansion.md' 2024-04-04T22:23:46,724 adding 'resources/tutorials/tutorial_cellprofiler.md' 2024-04-04T22:23:46,728 adding 'resources/tutorials/tutorial_local_slurm.md' 2024-04-04T22:23:46,769 adding 'resources/tutorials/images/Cells.tif' 2024-04-04T22:23:46,807 adding 'resources/tutorials/images/cellexpansion.png' 2024-04-04T22:23:46,819 adding 'resources/tutorials/images/gc_allow_ssh.PNG' 2024-04-04T22:23:46,842 adding 'resources/tutorials/images/nuclei_labels.png' 2024-04-04T22:23:46,846 adding 'resources/tutorials/images/webclient_init_env.PNG' 2024-04-04T22:23:46,849 adding 'resources/tutorials/images/webclient_init_env_done.PNG' 2024-04-04T22:23:46,853 adding 'resources/tutorials/images/webclient_run_cellpose.PNG' 2024-04-04T22:23:46,859 adding 'resources/tutorials/images/webclient_run_workflow.PNG' 2024-04-04T22:23:46,862 adding 'tests/integration/__init__.py' 2024-04-04T22:23:46,864 adding 'tests/unit/__init__.py' 2024-04-04T22:23:46,868 adding 'tests/unit/test_slurm_client.py' 2024-04-04T22:23:46,871 adding 'biomero-1.7.1.dist-info/LICENSE' 2024-04-04T22:23:46,878 adding 'biomero-1.7.1.dist-info/METADATA' 2024-04-04T22:23:46,880 adding 'biomero-1.7.1.dist-info/WHEEL' 2024-04-04T22:23:46,881 adding 'biomero-1.7.1.dist-info/top_level.txt' 2024-04-04T22:23:46,882 adding 'biomero-1.7.1.dist-info/RECORD' 2024-04-04T22:23:46,910 removing build/bdist.linux-armv7l/wheel 2024-04-04T22:23:47,057 Building wheel for biomero (pyproject.toml): finished with status 'done' 2024-04-04T22:23:47,086 Created wheel for biomero: filename=biomero-1.7.1-py3-none-any.whl size=1090876 sha256=d2aec9750cfab56583a01cbd08b734569956b5d4a5a0c524e6b57bc8d76338b4 2024-04-04T22:23:47,088 Stored in directory: /tmp/pip-ephem-wheel-cache-kr_rmw80/wheels/4f/a3/21/1c115e6201a699e4dac53a60eb110a6d8d0787eceeb77414bc 2024-04-04T22:23:47,113 Successfully built biomero 2024-04-04T22:23:47,227 Removed build tracker: '/tmp/pip-build-tracker-7u_nj09x'