2024-04-09T03:00:38,994 Created temporary directory: /tmp/pip-build-tracker-ubs4ukoi
2024-04-09T03:00:38,995 Initialized build tracking at /tmp/pip-build-tracker-ubs4ukoi
2024-04-09T03:00:38,996 Created build tracker: /tmp/pip-build-tracker-ubs4ukoi
2024-04-09T03:00:38,996 Entered build tracker: /tmp/pip-build-tracker-ubs4ukoi
2024-04-09T03:00:38,997 Created temporary directory: /tmp/pip-wheel-pdgf4fhn
2024-04-09T03:00:39,000 Created temporary directory: /tmp/pip-ephem-wheel-cache-bp8lpd6o
2024-04-09T03:00:39,022 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-04-09T03:00:39,025 2 location(s) to search for versions of stcat:
2024-04-09T03:00:39,025 * https://pypi.org/simple/stcat/
2024-04-09T03:00:39,025 * https://www.piwheels.org/simple/stcat/
2024-04-09T03:00:39,026 Fetching project page and analyzing links: https://pypi.org/simple/stcat/
2024-04-09T03:00:39,027 Getting page https://pypi.org/simple/stcat/
2024-04-09T03:00:39,028 Found index url https://pypi.org/simple/
2024-04-09T03:00:39,251 Fetched page https://pypi.org/simple/stcat/ as application/vnd.pypi.simple.v1+json
2024-04-09T03:00:39,253   Skipping link: No binaries permitted for stcat: https://files.pythonhosted.org/packages/dd/d9/7509763cc9a3235091c79b0b4a3a9a415f7b643a68593550ab533d06677d/STCAT-0.2-py3-none-any.whl (from https://pypi.org/simple/stcat/) (requires-python:>=3.8)
2024-04-09T03:00:39,254   Found link https://files.pythonhosted.org/packages/54/ff/46d805ee24659e6c5896441d6a58a39f48af44e54ab5496acf66a564fbc2/STCAT-0.2.tar.gz (from https://pypi.org/simple/stcat/) (requires-python:>=3.8), version: 0.2
2024-04-09T03:00:39,254   Skipping link: No binaries permitted for stcat: https://files.pythonhosted.org/packages/a1/c2/622b9f058b24687ff867af676fe1a228e5ce888299d80fb946f23947d90b/STCAT-0.3-py3-none-any.whl (from https://pypi.org/simple/stcat/) (requires-python:>=3.8)
2024-04-09T03:00:39,255   Found link https://files.pythonhosted.org/packages/0a/80/6f95d103fabcc905d1f3752b8df72f6f94bbee03d856fea3b87d6734399e/STCAT-0.3.tar.gz (from https://pypi.org/simple/stcat/) (requires-python:>=3.8), version: 0.3
2024-04-09T03:00:39,256 Fetching project page and analyzing links: https://www.piwheels.org/simple/stcat/
2024-04-09T03:00:39,257 Getting page https://www.piwheels.org/simple/stcat/
2024-04-09T03:00:39,258 Found index url https://www.piwheels.org/simple/
2024-04-09T03:00:39,674 Fetched page https://www.piwheels.org/simple/stcat/ as text/html
2024-04-09T03:00:39,676   Skipping link: No binaries permitted for stcat: https://www.piwheels.org/simple/stcat/STCAT-0.2-py3-none-any.whl#sha256=faf26d207bd572f5fad92b52dcd16f0d45056fa51631366657ba80adc9e9f1ff (from https://www.piwheels.org/simple/stcat/) (requires-python:>=3.8)
2024-04-09T03:00:39,677 Skipping link: not a file: https://www.piwheels.org/simple/stcat/
2024-04-09T03:00:39,678 Skipping link: not a file: https://pypi.org/simple/stcat/
2024-04-09T03:00:39,696 Given no hashes to check 1 links for project 'stcat': discarding no candidates
2024-04-09T03:00:39,714 Collecting stcat==0.3
2024-04-09T03:00:39,716   Created temporary directory: /tmp/pip-unpack-7ckp2o3y
2024-04-09T03:00:39,942   Downloading STCAT-0.3.tar.gz (3.5 MB)
2024-04-09T03:00:40,867   Added stcat==0.3 from https://files.pythonhosted.org/packages/0a/80/6f95d103fabcc905d1f3752b8df72f6f94bbee03d856fea3b87d6734399e/STCAT-0.3.tar.gz to build tracker '/tmp/pip-build-tracker-ubs4ukoi'
2024-04-09T03:00:40,868   Running setup.py (path:/tmp/pip-wheel-pdgf4fhn/stcat_38ca64a748ce4ba0b16c557226ad947e/setup.py) egg_info for package stcat
2024-04-09T03:00:40,869   Created temporary directory: /tmp/pip-pip-egg-info-mzw9fuu0
2024-04-09T03:00:40,870   Preparing metadata (setup.py): started
2024-04-09T03:00:40,871   Running command python setup.py egg_info
2024-04-09T03:00:41,897   running egg_info
2024-04-09T03:00:41,898   creating /tmp/pip-pip-egg-info-mzw9fuu0/STCAT.egg-info
2024-04-09T03:00:41,922   writing /tmp/pip-pip-egg-info-mzw9fuu0/STCAT.egg-info/PKG-INFO
2024-04-09T03:00:41,926   writing dependency_links to /tmp/pip-pip-egg-info-mzw9fuu0/STCAT.egg-info/dependency_links.txt
2024-04-09T03:00:41,928   writing requirements to /tmp/pip-pip-egg-info-mzw9fuu0/STCAT.egg-info/requires.txt
2024-04-09T03:00:41,929   writing top-level names to /tmp/pip-pip-egg-info-mzw9fuu0/STCAT.egg-info/top_level.txt
2024-04-09T03:00:41,930   writing manifest file '/tmp/pip-pip-egg-info-mzw9fuu0/STCAT.egg-info/SOURCES.txt'
2024-04-09T03:00:42,008   reading manifest file '/tmp/pip-pip-egg-info-mzw9fuu0/STCAT.egg-info/SOURCES.txt'
2024-04-09T03:00:42,009   reading manifest template 'MANIFEST.in'
2024-04-09T03:00:42,014   writing manifest file '/tmp/pip-pip-egg-info-mzw9fuu0/STCAT.egg-info/SOURCES.txt'
2024-04-09T03:00:42,122   Preparing metadata (setup.py): finished with status 'done'
2024-04-09T03:00:42,125   Source in /tmp/pip-wheel-pdgf4fhn/stcat_38ca64a748ce4ba0b16c557226ad947e has version 0.3, which satisfies requirement stcat==0.3 from https://files.pythonhosted.org/packages/0a/80/6f95d103fabcc905d1f3752b8df72f6f94bbee03d856fea3b87d6734399e/STCAT-0.3.tar.gz
2024-04-09T03:00:42,126   Removed stcat==0.3 from https://files.pythonhosted.org/packages/0a/80/6f95d103fabcc905d1f3752b8df72f6f94bbee03d856fea3b87d6734399e/STCAT-0.3.tar.gz from build tracker '/tmp/pip-build-tracker-ubs4ukoi'
2024-04-09T03:00:42,132 Created temporary directory: /tmp/pip-unpack-wufpzpyo
2024-04-09T03:00:42,133 Created temporary directory: /tmp/pip-unpack-9usp9fov
2024-04-09T03:00:42,143 Building wheels for collected packages: stcat
2024-04-09T03:00:42,148   Created temporary directory: /tmp/pip-wheel-9lo21b5q
2024-04-09T03:00:42,148   Building wheel for stcat (setup.py): started
2024-04-09T03:00:42,149   Destination directory: /tmp/pip-wheel-9lo21b5q
2024-04-09T03:00:42,150   Running command python setup.py bdist_wheel
2024-04-09T03:00:43,171   running bdist_wheel
2024-04-09T03:00:43,268   running build
2024-04-09T03:00:43,268   running build_py
2024-04-09T03:00:43,295   creating build
2024-04-09T03:00:43,296   creating build/lib
2024-04-09T03:00:43,296   creating build/lib/STCAT
2024-04-09T03:00:43,298   copying STCAT/classifier.py -> build/lib/STCAT
2024-04-09T03:00:43,301   copying STCAT/logger.py -> build/lib/STCAT
2024-04-09T03:00:43,302   copying STCAT/annotate.py -> build/lib/STCAT
2024-04-09T03:00:43,304   copying STCAT/STCAT.py -> build/lib/STCAT
2024-04-09T03:00:43,307   copying STCAT/__init__.py -> build/lib/STCAT
2024-04-09T03:00:43,309   copying STCAT/models.py -> build/lib/STCAT
2024-04-09T03:00:43,311   running egg_info
2024-04-09T03:00:43,365   writing STCAT.egg-info/PKG-INFO
2024-04-09T03:00:43,368   writing dependency_links to STCAT.egg-info/dependency_links.txt
2024-04-09T03:00:43,370   writing requirements to STCAT.egg-info/requires.txt
2024-04-09T03:00:43,371   writing top-level names to STCAT.egg-info/top_level.txt
2024-04-09T03:00:43,398   reading manifest file 'STCAT.egg-info/SOURCES.txt'
2024-04-09T03:00:43,400   reading manifest template 'MANIFEST.in'
2024-04-09T03:00:43,405   writing manifest file 'STCAT.egg-info/SOURCES.txt'
2024-04-09T03:00:43,407   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'STCAT.data' is absent from the `packages` configuration.
2024-04-09T03:00:43,408   !!

2024-04-09T03:00:43,409           ********************************************************************************
2024-04-09T03:00:43,409           ############################
2024-04-09T03:00:43,410           # Package would be ignored #
2024-04-09T03:00:43,410           ############################
2024-04-09T03:00:43,411           Python recognizes 'STCAT.data' as an importable package[^1],
2024-04-09T03:00:43,411           but it is absent from setuptools' `packages` configuration.

2024-04-09T03:00:43,413           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-09T03:00:43,413           package, please make sure that 'STCAT.data' is explicitly added
2024-04-09T03:00:43,414           to the `packages` configuration field.

2024-04-09T03:00:43,415           Alternatively, you can also rely on setuptools' discovery methods
2024-04-09T03:00:43,416           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-09T03:00:43,417           instead of `find_packages(...)`/`find:`).

2024-04-09T03:00:43,418           You can read more about "package discovery" on setuptools documentation page:

2024-04-09T03:00:43,419           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-09T03:00:43,420           If you don't want 'STCAT.data' to be distributed and are
2024-04-09T03:00:43,420           already explicitly excluding 'STCAT.data' via
2024-04-09T03:00:43,421           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-09T03:00:43,421           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-09T03:00:43,422           combination with a more fine grained `package-data` configuration.

2024-04-09T03:00:43,424           You can read more about "package data files" on setuptools documentation page:

2024-04-09T03:00:43,448           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-09T03:00:43,449           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-09T03:00:43,449                 even if it does not contain any `.py` files.
2024-04-09T03:00:43,450                 On the other hand, currently there is no concept of package data
2024-04-09T03:00:43,450                 directory, all directories are treated like packages.
2024-04-09T03:00:43,451           ********************************************************************************

2024-04-09T03:00:43,452   !!
2024-04-09T03:00:43,452     check.warn(importable)
2024-04-09T03:00:43,453   creating build/lib/STCAT/data
2024-04-09T03:00:43,453   copying STCAT/data/T_cell.pkl -> build/lib/STCAT/data
2024-04-09T03:00:43,454   copying STCAT/data/cd4.pkl -> build/lib/STCAT/data
2024-04-09T03:00:43,466   copying STCAT/data/cd8.pkl -> build/lib/STCAT/data
2024-04-09T03:00:43,479   copying STCAT/data/marker_CD4.txt -> build/lib/STCAT/data
2024-04-09T03:00:43,482   copying STCAT/data/marker_CD8.txt -> build/lib/STCAT/data
2024-04-09T03:00:43,508   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2024-04-09T03:00:43,508   !!

2024-04-09T03:00:43,509           ********************************************************************************
2024-04-09T03:00:43,510           Please avoid running ``setup.py`` directly.
2024-04-09T03:00:43,510           Instead, use pypa/build, pypa/installer or other
2024-04-09T03:00:43,511           standards-based tools.

2024-04-09T03:00:43,512           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2024-04-09T03:00:43,513           ********************************************************************************

2024-04-09T03:00:43,514   !!
2024-04-09T03:00:43,514     self.initialize_options()
2024-04-09T03:00:43,532   installing to build/bdist.linux-armv7l/wheel
2024-04-09T03:00:43,533   running install
2024-04-09T03:00:43,556   running install_lib
2024-04-09T03:00:43,580   creating build/bdist.linux-armv7l
2024-04-09T03:00:43,581   creating build/bdist.linux-armv7l/wheel
2024-04-09T03:00:43,582   creating build/bdist.linux-armv7l/wheel/STCAT
2024-04-09T03:00:43,584   creating build/bdist.linux-armv7l/wheel/STCAT/data
2024-04-09T03:00:43,585   copying build/lib/STCAT/data/marker_CD4.txt -> build/bdist.linux-armv7l/wheel/STCAT/data
2024-04-09T03:00:43,587   copying build/lib/STCAT/data/cd8.pkl -> build/bdist.linux-armv7l/wheel/STCAT/data
2024-04-09T03:00:43,598   copying build/lib/STCAT/data/cd4.pkl -> build/bdist.linux-armv7l/wheel/STCAT/data
2024-04-09T03:00:43,615   copying build/lib/STCAT/data/marker_CD8.txt -> build/bdist.linux-armv7l/wheel/STCAT/data
2024-04-09T03:00:43,617   copying build/lib/STCAT/data/T_cell.pkl -> build/bdist.linux-armv7l/wheel/STCAT/data
2024-04-09T03:00:43,653   copying build/lib/STCAT/classifier.py -> build/bdist.linux-armv7l/wheel/STCAT
2024-04-09T03:00:43,656   copying build/lib/STCAT/logger.py -> build/bdist.linux-armv7l/wheel/STCAT
2024-04-09T03:00:43,657   copying build/lib/STCAT/annotate.py -> build/bdist.linux-armv7l/wheel/STCAT
2024-04-09T03:00:43,660   copying build/lib/STCAT/STCAT.py -> build/bdist.linux-armv7l/wheel/STCAT
2024-04-09T03:00:43,662   copying build/lib/STCAT/__init__.py -> build/bdist.linux-armv7l/wheel/STCAT
2024-04-09T03:00:43,664   copying build/lib/STCAT/models.py -> build/bdist.linux-armv7l/wheel/STCAT
2024-04-09T03:00:43,665   running install_egg_info
2024-04-09T03:00:43,696   Copying STCAT.egg-info to build/bdist.linux-armv7l/wheel/STCAT-0.3-py3.11.egg-info
2024-04-09T03:00:43,705   running install_scripts
2024-04-09T03:00:43,718   creating build/bdist.linux-armv7l/wheel/STCAT-0.3.dist-info/WHEEL
2024-04-09T03:00:43,720   creating '/tmp/pip-wheel-9lo21b5q/STCAT-0.3-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-04-09T03:00:43,723   adding 'STCAT/STCAT.py'
2024-04-09T03:00:43,724   adding 'STCAT/__init__.py'
2024-04-09T03:00:43,726   adding 'STCAT/annotate.py'
2024-04-09T03:00:43,729   adding 'STCAT/classifier.py'
2024-04-09T03:00:43,731   adding 'STCAT/logger.py'
2024-04-09T03:00:43,732   adding 'STCAT/models.py'
2024-04-09T03:00:44,007   adding 'STCAT/data/T_cell.pkl'
2024-04-09T03:00:44,153   adding 'STCAT/data/cd4.pkl'
2024-04-09T03:00:44,237   adding 'STCAT/data/cd8.pkl'
2024-04-09T03:00:44,243   adding 'STCAT/data/marker_CD4.txt'
2024-04-09T03:00:44,244   adding 'STCAT/data/marker_CD8.txt'
2024-04-09T03:00:44,246   adding 'STCAT-0.3.dist-info/METADATA'
2024-04-09T03:00:44,247   adding 'STCAT-0.3.dist-info/WHEEL'
2024-04-09T03:00:44,248   adding 'STCAT-0.3.dist-info/top_level.txt'
2024-04-09T03:00:44,248   adding 'STCAT-0.3.dist-info/RECORD'
2024-04-09T03:00:44,287   removing build/bdist.linux-armv7l/wheel
2024-04-09T03:00:44,404   Building wheel for stcat (setup.py): finished with status 'done'
2024-04-09T03:00:44,441   Created wheel for stcat: filename=STCAT-0.3-py3-none-any.whl size=3503702 sha256=09afd386b49d2f718b124e55b00afc7b12430010014558c7d7df34f006324d19
2024-04-09T03:00:44,442   Stored in directory: /tmp/pip-ephem-wheel-cache-bp8lpd6o/wheels/94/9e/95/16f47d37d25b60321116e11ee211622f38592277c396186b5f
2024-04-09T03:00:44,452 Successfully built stcat
2024-04-09T03:00:44,535 Removed build tracker: '/tmp/pip-build-tracker-ubs4ukoi'