2024-04-09T04:24:33,523 Created temporary directory: /tmp/pip-build-tracker-3nb6wfv3
2024-04-09T04:24:33,525 Initialized build tracking at /tmp/pip-build-tracker-3nb6wfv3
2024-04-09T04:24:33,525 Created build tracker: /tmp/pip-build-tracker-3nb6wfv3
2024-04-09T04:24:33,526 Entered build tracker: /tmp/pip-build-tracker-3nb6wfv3
2024-04-09T04:24:33,526 Created temporary directory: /tmp/pip-wheel-k1mwv4qo
2024-04-09T04:24:33,530 Created temporary directory: /tmp/pip-ephem-wheel-cache-02diu67l
2024-04-09T04:24:33,554 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-04-09T04:24:33,557 2 location(s) to search for versions of stcat:
2024-04-09T04:24:33,557 * https://pypi.org/simple/stcat/
2024-04-09T04:24:33,557 * https://www.piwheels.org/simple/stcat/
2024-04-09T04:24:33,558 Fetching project page and analyzing links: https://pypi.org/simple/stcat/
2024-04-09T04:24:33,559 Getting page https://pypi.org/simple/stcat/
2024-04-09T04:24:33,560 Found index url https://pypi.org/simple/
2024-04-09T04:24:33,777 Fetched page https://pypi.org/simple/stcat/ as application/vnd.pypi.simple.v1+json
2024-04-09T04:24:33,780   Skipping link: No binaries permitted for stcat: https://files.pythonhosted.org/packages/dd/d9/7509763cc9a3235091c79b0b4a3a9a415f7b643a68593550ab533d06677d/STCAT-0.2-py3-none-any.whl (from https://pypi.org/simple/stcat/) (requires-python:>=3.8)
2024-04-09T04:24:33,780   Found link https://files.pythonhosted.org/packages/54/ff/46d805ee24659e6c5896441d6a58a39f48af44e54ab5496acf66a564fbc2/STCAT-0.2.tar.gz (from https://pypi.org/simple/stcat/) (requires-python:>=3.8), version: 0.2
2024-04-09T04:24:33,781   Skipping link: No binaries permitted for stcat: https://files.pythonhosted.org/packages/a1/c2/622b9f058b24687ff867af676fe1a228e5ce888299d80fb946f23947d90b/STCAT-0.3-py3-none-any.whl (from https://pypi.org/simple/stcat/) (requires-python:>=3.8)
2024-04-09T04:24:33,782   Found link https://files.pythonhosted.org/packages/0a/80/6f95d103fabcc905d1f3752b8df72f6f94bbee03d856fea3b87d6734399e/STCAT-0.3.tar.gz (from https://pypi.org/simple/stcat/) (requires-python:>=3.8), version: 0.3
2024-04-09T04:24:33,783   Skipping link: No binaries permitted for stcat: https://files.pythonhosted.org/packages/00/9f/c43fc909bbaa04cc23ab22dce4347ba97041c75509b1ad05cb32208af304/STCAT-0.3.1-py3-none-any.whl (from https://pypi.org/simple/stcat/) (requires-python:>=3.8)
2024-04-09T04:24:33,784   Found link https://files.pythonhosted.org/packages/3d/85/26de4a35d00621ab453aec285423cd2d8dcd8894aed6c104efd051548eb2/STCAT-0.3.1.tar.gz (from https://pypi.org/simple/stcat/) (requires-python:>=3.8), version: 0.3.1
2024-04-09T04:24:33,785 Fetching project page and analyzing links: https://www.piwheels.org/simple/stcat/
2024-04-09T04:24:33,785 Getting page https://www.piwheels.org/simple/stcat/
2024-04-09T04:24:33,787 Found index url https://www.piwheels.org/simple/
2024-04-09T04:24:33,941 Fetched page https://www.piwheels.org/simple/stcat/ as text/html
2024-04-09T04:24:33,942   Skipping link: No binaries permitted for stcat: https://www.piwheels.org/simple/stcat/STCAT-0.3-py3-none-any.whl#sha256=09afd386b49d2f718b124e55b00afc7b12430010014558c7d7df34f006324d19 (from https://www.piwheels.org/simple/stcat/) (requires-python:>=3.8)
2024-04-09T04:24:33,943   Skipping link: No binaries permitted for stcat: https://www.piwheels.org/simple/stcat/STCAT-0.2-py3-none-any.whl#sha256=faf26d207bd572f5fad92b52dcd16f0d45056fa51631366657ba80adc9e9f1ff (from https://www.piwheels.org/simple/stcat/) (requires-python:>=3.8)
2024-04-09T04:24:33,944 Skipping link: not a file: https://www.piwheels.org/simple/stcat/
2024-04-09T04:24:33,944 Skipping link: not a file: https://pypi.org/simple/stcat/
2024-04-09T04:24:33,962 Given no hashes to check 1 links for project 'stcat': discarding no candidates
2024-04-09T04:24:33,980 Collecting stcat==0.3.1
2024-04-09T04:24:33,982   Created temporary directory: /tmp/pip-unpack-fmyou2at
2024-04-09T04:24:34,203   Downloading STCAT-0.3.1.tar.gz (3.5 MB)
2024-04-09T04:24:35,114   Added stcat==0.3.1 from https://files.pythonhosted.org/packages/3d/85/26de4a35d00621ab453aec285423cd2d8dcd8894aed6c104efd051548eb2/STCAT-0.3.1.tar.gz to build tracker '/tmp/pip-build-tracker-3nb6wfv3'
2024-04-09T04:24:35,115   Running setup.py (path:/tmp/pip-wheel-k1mwv4qo/stcat_8b4e5099ae4046e9ae63937851abf69e/setup.py) egg_info for package stcat
2024-04-09T04:24:35,117   Created temporary directory: /tmp/pip-pip-egg-info-5a_5gt__
2024-04-09T04:24:35,117   Preparing metadata (setup.py): started
2024-04-09T04:24:35,118   Running command python setup.py egg_info
2024-04-09T04:24:36,152   running egg_info
2024-04-09T04:24:36,154   creating /tmp/pip-pip-egg-info-5a_5gt__/STCAT.egg-info
2024-04-09T04:24:36,179   writing /tmp/pip-pip-egg-info-5a_5gt__/STCAT.egg-info/PKG-INFO
2024-04-09T04:24:36,181   writing dependency_links to /tmp/pip-pip-egg-info-5a_5gt__/STCAT.egg-info/dependency_links.txt
2024-04-09T04:24:36,183   writing requirements to /tmp/pip-pip-egg-info-5a_5gt__/STCAT.egg-info/requires.txt
2024-04-09T04:24:36,184   writing top-level names to /tmp/pip-pip-egg-info-5a_5gt__/STCAT.egg-info/top_level.txt
2024-04-09T04:24:36,186   writing manifest file '/tmp/pip-pip-egg-info-5a_5gt__/STCAT.egg-info/SOURCES.txt'
2024-04-09T04:24:36,265   reading manifest file '/tmp/pip-pip-egg-info-5a_5gt__/STCAT.egg-info/SOURCES.txt'
2024-04-09T04:24:36,266   reading manifest template 'MANIFEST.in'
2024-04-09T04:24:36,271   writing manifest file '/tmp/pip-pip-egg-info-5a_5gt__/STCAT.egg-info/SOURCES.txt'
2024-04-09T04:24:36,379   Preparing metadata (setup.py): finished with status 'done'
2024-04-09T04:24:36,383   Source in /tmp/pip-wheel-k1mwv4qo/stcat_8b4e5099ae4046e9ae63937851abf69e has version 0.3.1, which satisfies requirement stcat==0.3.1 from https://files.pythonhosted.org/packages/3d/85/26de4a35d00621ab453aec285423cd2d8dcd8894aed6c104efd051548eb2/STCAT-0.3.1.tar.gz
2024-04-09T04:24:36,384   Removed stcat==0.3.1 from https://files.pythonhosted.org/packages/3d/85/26de4a35d00621ab453aec285423cd2d8dcd8894aed6c104efd051548eb2/STCAT-0.3.1.tar.gz from build tracker '/tmp/pip-build-tracker-3nb6wfv3'
2024-04-09T04:24:36,389 Created temporary directory: /tmp/pip-unpack-_t_c5a_a
2024-04-09T04:24:36,390 Created temporary directory: /tmp/pip-unpack-vkv340rs
2024-04-09T04:24:36,401 Building wheels for collected packages: stcat
2024-04-09T04:24:36,405   Created temporary directory: /tmp/pip-wheel-2nyn5i8n
2024-04-09T04:24:36,405   Building wheel for stcat (setup.py): started
2024-04-09T04:24:36,407   Destination directory: /tmp/pip-wheel-2nyn5i8n
2024-04-09T04:24:36,407   Running command python setup.py bdist_wheel
2024-04-09T04:24:39,541   running bdist_wheel
2024-04-09T04:24:39,637   running build
2024-04-09T04:24:39,638   running build_py
2024-04-09T04:24:39,665   creating build
2024-04-09T04:24:39,665   creating build/lib
2024-04-09T04:24:39,666   creating build/lib/STCAT
2024-04-09T04:24:39,667   copying STCAT/classifier.py -> build/lib/STCAT
2024-04-09T04:24:39,670   copying STCAT/logger.py -> build/lib/STCAT
2024-04-09T04:24:39,672   copying STCAT/annotate.py -> build/lib/STCAT
2024-04-09T04:24:39,675   copying STCAT/STCAT.py -> build/lib/STCAT
2024-04-09T04:24:39,677   copying STCAT/__init__.py -> build/lib/STCAT
2024-04-09T04:24:39,679   copying STCAT/models.py -> build/lib/STCAT
2024-04-09T04:24:39,681   running egg_info
2024-04-09T04:24:39,736   writing STCAT.egg-info/PKG-INFO
2024-04-09T04:24:39,746   writing dependency_links to STCAT.egg-info/dependency_links.txt
2024-04-09T04:24:39,754   writing requirements to STCAT.egg-info/requires.txt
2024-04-09T04:24:39,756   writing top-level names to STCAT.egg-info/top_level.txt
2024-04-09T04:24:40,563   reading manifest file 'STCAT.egg-info/SOURCES.txt'
2024-04-09T04:24:40,589   reading manifest template 'MANIFEST.in'
2024-04-09T04:24:40,678   writing manifest file 'STCAT.egg-info/SOURCES.txt'
2024-04-09T04:24:40,711   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'STCAT.data' is absent from the `packages` configuration.
2024-04-09T04:24:40,712   !!

2024-04-09T04:24:40,801           ********************************************************************************
2024-04-09T04:24:40,889           ############################
2024-04-09T04:24:41,397           # Package would be ignored #
2024-04-09T04:24:41,642           ############################
2024-04-09T04:24:42,353           Python recognizes 'STCAT.data' as an importable package[^1],
2024-04-09T04:24:42,490           but it is absent from setuptools' `packages` configuration.

2024-04-09T04:24:44,428           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-09T04:24:44,430           package, please make sure that 'STCAT.data' is explicitly added
2024-04-09T04:24:44,432           to the `packages` configuration field.

2024-04-09T04:24:44,434           Alternatively, you can also rely on setuptools' discovery methods
2024-04-09T04:24:44,435           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-09T04:24:44,436           instead of `find_packages(...)`/`find:`).

2024-04-09T04:24:44,438           You can read more about "package discovery" on setuptools documentation page:

2024-04-09T04:24:44,440           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-09T04:24:44,442           If you don't want 'STCAT.data' to be distributed and are
2024-04-09T04:24:44,442           already explicitly excluding 'STCAT.data' via
2024-04-09T04:24:44,443           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-09T04:24:44,444           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-09T04:24:44,445           combination with a more fine grained `package-data` configuration.

2024-04-09T04:24:44,451           You can read more about "package data files" on setuptools documentation page:

2024-04-09T04:24:44,471           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-09T04:24:44,476           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-09T04:24:44,477                 even if it does not contain any `.py` files.
2024-04-09T04:24:44,478                 On the other hand, currently there is no concept of package data
2024-04-09T04:24:44,479                 directory, all directories are treated like packages.
2024-04-09T04:24:44,485           ********************************************************************************

2024-04-09T04:24:44,502   !!
2024-04-09T04:24:44,503     check.warn(importable)
2024-04-09T04:24:44,504   creating build/lib/STCAT/data
2024-04-09T04:24:44,504   copying STCAT/data/T_cell.pkl -> build/lib/STCAT/data
2024-04-09T04:24:44,508   copying STCAT/data/cd4.pkl -> build/lib/STCAT/data
2024-04-09T04:24:44,509   copying STCAT/data/cd8.pkl -> build/lib/STCAT/data
2024-04-09T04:24:44,510   copying STCAT/data/marker_CD4.txt -> build/lib/STCAT/data
2024-04-09T04:24:44,513   copying STCAT/data/marker_CD8.txt -> build/lib/STCAT/data
2024-04-09T04:24:44,555   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2024-04-09T04:24:44,556   !!

2024-04-09T04:24:44,557           ********************************************************************************
2024-04-09T04:24:44,558           Please avoid running ``setup.py`` directly.
2024-04-09T04:24:44,559           Instead, use pypa/build, pypa/installer or other
2024-04-09T04:24:44,560           standards-based tools.

2024-04-09T04:24:44,561           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2024-04-09T04:24:44,562           ********************************************************************************

2024-04-09T04:24:44,563   !!
2024-04-09T04:24:44,564     self.initialize_options()
2024-04-09T04:24:44,587   installing to build/bdist.linux-armv7l/wheel
2024-04-09T04:24:44,587   running install
2024-04-09T04:24:44,612   running install_lib
2024-04-09T04:24:44,637   creating build/bdist.linux-armv7l
2024-04-09T04:24:44,638   creating build/bdist.linux-armv7l/wheel
2024-04-09T04:24:44,640   creating build/bdist.linux-armv7l/wheel/STCAT
2024-04-09T04:24:44,643   creating build/bdist.linux-armv7l/wheel/STCAT/data
2024-04-09T04:24:44,644   copying build/lib/STCAT/data/marker_CD4.txt -> build/bdist.linux-armv7l/wheel/STCAT/data
2024-04-09T04:24:44,647   copying build/lib/STCAT/data/cd8.pkl -> build/bdist.linux-armv7l/wheel/STCAT/data
2024-04-09T04:24:44,662   copying build/lib/STCAT/data/cd4.pkl -> build/bdist.linux-armv7l/wheel/STCAT/data
2024-04-09T04:24:44,682   copying build/lib/STCAT/data/marker_CD8.txt -> build/bdist.linux-armv7l/wheel/STCAT/data
2024-04-09T04:24:44,684   copying build/lib/STCAT/data/T_cell.pkl -> build/bdist.linux-armv7l/wheel/STCAT/data
2024-04-09T04:24:44,719   copying build/lib/STCAT/classifier.py -> build/bdist.linux-armv7l/wheel/STCAT
2024-04-09T04:24:44,722   copying build/lib/STCAT/logger.py -> build/bdist.linux-armv7l/wheel/STCAT
2024-04-09T04:24:44,723   copying build/lib/STCAT/annotate.py -> build/bdist.linux-armv7l/wheel/STCAT
2024-04-09T04:24:44,726   copying build/lib/STCAT/STCAT.py -> build/bdist.linux-armv7l/wheel/STCAT
2024-04-09T04:24:44,729   copying build/lib/STCAT/__init__.py -> build/bdist.linux-armv7l/wheel/STCAT
2024-04-09T04:24:44,730   copying build/lib/STCAT/models.py -> build/bdist.linux-armv7l/wheel/STCAT
2024-04-09T04:24:44,733   running install_egg_info
2024-04-09T04:24:44,770   Copying STCAT.egg-info to build/bdist.linux-armv7l/wheel/STCAT-0.3.1-py3.11.egg-info
2024-04-09T04:24:44,782   running install_scripts
2024-04-09T04:24:44,797   creating build/bdist.linux-armv7l/wheel/STCAT-0.3.1.dist-info/WHEEL
2024-04-09T04:24:44,799   creating '/tmp/pip-wheel-2nyn5i8n/STCAT-0.3.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-04-09T04:24:44,802   adding 'STCAT/STCAT.py'
2024-04-09T04:24:44,804   adding 'STCAT/__init__.py'
2024-04-09T04:24:44,806   adding 'STCAT/annotate.py'
2024-04-09T04:24:44,809   adding 'STCAT/classifier.py'
2024-04-09T04:24:44,810   adding 'STCAT/logger.py'
2024-04-09T04:24:44,812   adding 'STCAT/models.py'
2024-04-09T04:24:45,088   adding 'STCAT/data/T_cell.pkl'
2024-04-09T04:24:45,234   adding 'STCAT/data/cd4.pkl'
2024-04-09T04:24:45,965   adding 'STCAT/data/cd8.pkl'
2024-04-09T04:24:46,191   adding 'STCAT/data/marker_CD4.txt'
2024-04-09T04:24:46,195   adding 'STCAT/data/marker_CD8.txt'
2024-04-09T04:24:46,198   adding 'STCAT-0.3.1.dist-info/METADATA'
2024-04-09T04:24:46,200   adding 'STCAT-0.3.1.dist-info/WHEEL'
2024-04-09T04:24:46,202   adding 'STCAT-0.3.1.dist-info/top_level.txt'
2024-04-09T04:24:46,203   adding 'STCAT-0.3.1.dist-info/RECORD'
2024-04-09T04:24:46,279   removing build/bdist.linux-armv7l/wheel
2024-04-09T04:24:46,408   Building wheel for stcat (setup.py): finished with status 'done'
2024-04-09T04:24:46,445   Created wheel for stcat: filename=STCAT-0.3.1-py3-none-any.whl size=3503713 sha256=9222fb8e2c8a9b3ced6fcf927634943d0a8ff963cf28ca70f0f85907bb76dcf2
2024-04-09T04:24:46,447   Stored in directory: /tmp/pip-ephem-wheel-cache-02diu67l/wheels/a8/25/31/c71fa0537a259eb5915ef847f2d0ec2e46116bde5148d82198
2024-04-09T04:24:46,458 Successfully built stcat
2024-04-09T04:24:46,553 Removed build tracker: '/tmp/pip-build-tracker-3nb6wfv3'