2024-04-17T05:17:33,552 Created temporary directory: /tmp/pip-build-tracker-i_dg1899 2024-04-17T05:17:33,553 Initialized build tracking at /tmp/pip-build-tracker-i_dg1899 2024-04-17T05:17:33,553 Created build tracker: /tmp/pip-build-tracker-i_dg1899 2024-04-17T05:17:33,554 Entered build tracker: /tmp/pip-build-tracker-i_dg1899 2024-04-17T05:17:33,554 Created temporary directory: /tmp/pip-wheel-b5nvfxxc 2024-04-17T05:17:33,558 Created temporary directory: /tmp/pip-ephem-wheel-cache-gfj694jg 2024-04-17T05:17:33,584 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-04-17T05:17:33,588 2 location(s) to search for versions of countess: 2024-04-17T05:17:33,588 * https://pypi.org/simple/countess/ 2024-04-17T05:17:33,588 * https://www.piwheels.org/simple/countess/ 2024-04-17T05:17:33,588 Fetching project page and analyzing links: https://pypi.org/simple/countess/ 2024-04-17T05:17:33,589 Getting page https://pypi.org/simple/countess/ 2024-04-17T05:17:33,590 Found 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https://www.piwheels.org/simple/countess/countess-0.0.46-py3-none-any.whl#sha256=797a968001cbf5d70fe2073d34eaf547cc7aff5c9a4c33e50d9c568c76e0829b (from https://www.piwheels.org/simple/countess/) (requires-python:>=3.9) 2024-04-17T05:17:33,809 Skipping link: No binaries permitted for countess: https://www.piwheels.org/simple/countess/countess-0.0.45-py3-none-any.whl#sha256=f2428dfbca48db1689549812c53eea7d2563c4963d1f9ac0f19b834cf372e8e0 (from https://www.piwheels.org/simple/countess/) (requires-python:>=3.9) 2024-04-17T05:17:33,809 Skipping link: No binaries permitted for countess: https://www.piwheels.org/simple/countess/countess-0.0.44-py3-none-any.whl#sha256=3979c799698035a5fe8ca6347c118965df9797faa5d40568b0b76d725aaa504e (from https://www.piwheels.org/simple/countess/) (requires-python:>=3.9) 2024-04-17T05:17:33,809 Skipping link: No binaries permitted for countess: https://www.piwheels.org/simple/countess/countess-0.0.42-py3-none-any.whl#sha256=b8c0baba25590245917b03e34f8b3caaf8255cf6eca5bc06e1c0a698ccb4c0ac (from https://www.piwheels.org/simple/countess/) (requires-python:>=3.9) 2024-04-17T05:17:33,809 Skipping link: No binaries permitted for countess: https://www.piwheels.org/simple/countess/countess-0.0.41-py3-none-any.whl#sha256=5fe4248959854dfbcef2268b3c331932b75d2c4a3615d12477dc9d7d31852155 (from https://www.piwheels.org/simple/countess/) (requires-python:>=3.9) 2024-04-17T05:17:33,809 Skipping link: No binaries permitted for countess: https://www.piwheels.org/simple/countess/countess-0.0.40-py3-none-any.whl#sha256=392ff3ca62bae92a04618b1cb22e58d305c051b26e6f24e89a0cab7459c92584 (from https://www.piwheels.org/simple/countess/) (requires-python:>=3.9) 2024-04-17T05:17:33,810 Skipping link: No binaries permitted for countess: https://www.piwheels.org/simple/countess/countess-0.0.39-py3-none-any.whl#sha256=8c2b2127e43ed699ea1e538bb4e947df97c1ec411d678791d9262e5b0fbaca4e (from https://www.piwheels.org/simple/countess/) (requires-python:>=3.9) 2024-04-17T05:17:33,810 Skipping link: No binaries permitted for countess: https://www.piwheels.org/simple/countess/countess-0.0.38-py3-none-any.whl#sha256=e3d03fb72c9c3c5f15fd93e832075923e3959db534b6f274c9d3d4a31365db3c (from https://www.piwheels.org/simple/countess/) (requires-python:>=3.9) 2024-04-17T05:17:33,810 Skipping link: No binaries permitted for countess: https://www.piwheels.org/simple/countess/countess-0.0.37-py3-none-any.whl#sha256=75b6b66fdaa1f79ccce90e9bb008ab7e3477c253d74ddf57dfee8e539abfd21f (from https://www.piwheels.org/simple/countess/) (requires-python:>=3.9) 2024-04-17T05:17:33,810 Skipping link: No binaries permitted for countess: https://www.piwheels.org/simple/countess/countess-0.0.36-py3-none-any.whl#sha256=603448e85f40520713714996004ce948e1eac6e8ac74bbcf991f77d7711ed06c (from https://www.piwheels.org/simple/countess/) (requires-python:>=3.9) 2024-04-17T05:17:33,810 Skipping link: No binaries permitted for countess: https://www.piwheels.org/simple/countess/countess-0.0.35-py3-none-any.whl#sha256=f07029932e59b79b3303a8aa8f555f263f2d4e7fe36ca1838294b5de0aed01c3 (from https://www.piwheels.org/simple/countess/) (requires-python:>=3.9) 2024-04-17T05:17:33,811 Skipping link: No binaries permitted for countess: https://www.piwheels.org/simple/countess/countess-0.0.34-py3-none-any.whl#sha256=72b574480daa08cf24aa33436b47703c5502c448477e95a0e6a28e1000496d19 (from https://www.piwheels.org/simple/countess/) (requires-python:>=3.9) 2024-04-17T05:17:33,811 Skipping link: No binaries permitted for countess: https://www.piwheels.org/simple/countess/countess-0.0.33-py3-none-any.whl#sha256=1e4759cf22cdd62afc0c985295f5a3b7aa595a59eb37839f607ebf600e0675ac (from https://www.piwheels.org/simple/countess/) (requires-python:>=3.9) 2024-04-17T05:17:33,811 Skipping link: No binaries permitted for countess: https://www.piwheels.org/simple/countess/countess-0.0.32-py3-none-any.whl#sha256=685ac6150b1c3aa6bec7b6bb283af1f6c26b1b02885c7a02acb8c5e74263e32c (from https://www.piwheels.org/simple/countess/) (requires-python:>=3.9) 2024-04-17T05:17:33,811 Skipping link: No binaries permitted for countess: https://www.piwheels.org/simple/countess/countess-0.0.30-py3-none-any.whl#sha256=2af52e64e2c05a63b735659c9e2e22f444387978438e04d3f18cacc4e6d64e20 (from https://www.piwheels.org/simple/countess/) (requires-python:>=3.10) 2024-04-17T05:17:33,811 Skipping link: No binaries permitted for countess: https://www.piwheels.org/simple/countess/countess-0.0.29-py3-none-any.whl#sha256=21c4f2d66891af280ebd08edb348d4e8ab4721141fa13de1e1ed7a37c7a0e908 (from https://www.piwheels.org/simple/countess/) (requires-python:>=3.10) 2024-04-17T05:17:33,812 Skipping link: No binaries permitted for countess: https://www.piwheels.org/simple/countess/countess-0.0.21-py3-none-any.whl#sha256=c0aeb6db2a009f5a7680b8034acbae3f606103375ca3bf1ee9266cdd01181592 (from https://www.piwheels.org/simple/countess/) (requires-python:>=3.10) 2024-04-17T05:17:33,812 Skipping link: No binaries permitted for countess: https://www.piwheels.org/simple/countess/countess-0.0.20-py3-none-any.whl#sha256=bd0eb37d291a87f82529f63591e40c7f38206775e89ce26df8766ccd557af9f6 (from https://www.piwheels.org/simple/countess/) (requires-python:>=3.10) 2024-04-17T05:17:33,812 Skipping link: No binaries permitted for countess: https://www.piwheels.org/simple/countess/countess-0.0.19-py3-none-any.whl#sha256=ffc576c1d7ed30135ebdc49bb94f6b417fe9d7eb2efc43d58d492567a674f850 (from https://www.piwheels.org/simple/countess/) (requires-python:>=3.10) 2024-04-17T05:17:33,812 Skipping link: No binaries permitted for countess: https://www.piwheels.org/simple/countess/countess-0.0.18-py3-none-any.whl#sha256=966b8ee0eed604df5fda6596cbd0783e2c690d9cbfe3505cb3f2640832fa0bda (from https://www.piwheels.org/simple/countess/) (requires-python:>=3.10) 2024-04-17T05:17:33,812 Skipping link: No binaries permitted for countess: https://www.piwheels.org/simple/countess/countess-0.0.17-py3-none-any.whl#sha256=789e9dec0e8affaaaa5a44e6db460a626c67002b68f8fff09a230e27673a3548 (from https://www.piwheels.org/simple/countess/) (requires-python:>=3.10) 2024-04-17T05:17:33,812 Skipping link: No binaries permitted for countess: https://www.piwheels.org/simple/countess/countess-0.0.15-py3-none-any.whl#sha256=2a2e1f7af1c67626d46f3fb5143f8ab1b371a61484f16baa9fcbbc859f1df1c1 (from https://www.piwheels.org/simple/countess/) (requires-python:>=3.9) 2024-04-17T05:17:33,813 Skipping link: No binaries permitted for countess: https://www.piwheels.org/simple/countess/countess-0.0.13-py3-none-any.whl#sha256=d66f7d8a2dab4ab8bcf3b6f134681cf45464356c0b7c755807f8d33c12f06514 (from https://www.piwheels.org/simple/countess/) 2024-04-17T05:17:33,813 Skipping link: No binaries permitted for countess: https://www.piwheels.org/simple/countess/countess-0.0.11-py3-none-any.whl#sha256=ad5b90dc0b5a2de655f72590dfdcf4fe90c4465151e178f1629a4ec08ad7537b (from https://www.piwheels.org/simple/countess/) 2024-04-17T05:17:33,813 Skipping link: No binaries permitted for countess: https://www.piwheels.org/simple/countess/CountESS-0.0.1-py3-none-any.whl#sha256=951497cf5ac116d98dc3064cb52680af1c2516b71ca1b764178761f85bb61986 (from https://www.piwheels.org/simple/countess/) 2024-04-17T05:17:33,813 Skipping link: not a file: https://www.piwheels.org/simple/countess/ 2024-04-17T05:17:33,814 Skipping link: not a file: https://pypi.org/simple/countess/ 2024-04-17T05:17:33,835 Given no hashes to check 1 links for project 'countess': discarding no candidates 2024-04-17T05:17:33,852 Collecting countess==0.0.60 2024-04-17T05:17:33,854 Created temporary directory: /tmp/pip-unpack-z95gkmlc 2024-04-17T05:17:33,897 Downloading countess-0.0.60.tar.gz (86 kB) 2024-04-17T05:17:34,051 Added countess==0.0.60 from https://files.pythonhosted.org/packages/9d/3c/8a9911be48c8adce41c6303474642d4dce9c451cd114b5c640a3134f76b8/countess-0.0.60.tar.gz to build tracker '/tmp/pip-build-tracker-i_dg1899' 2024-04-17T05:17:34,058 Created temporary directory: /tmp/pip-build-env-tdcfxb26 2024-04-17T05:17:34,068 Installing build dependencies: started 2024-04-17T05:17:34,069 Running command pip subprocess to install build dependencies 2024-04-17T05:17:35,249 Using pip 24.0 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9) 2024-04-17T05:17:39,270 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-04-17T05:17:41,617 Collecting setuptools>=40.8.0 2024-04-17T05:17:41,995 Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.5.1-py3-none-any.whl (894 kB) 2024-04-17T05:17:46,042 Installing collected packages: setuptools 2024-04-17T05:17:48,413 Successfully installed setuptools-69.5.1 2024-04-17T05:17:48,863 Installing build dependencies: finished with status 'done' 2024-04-17T05:17:48,869 Getting requirements to build wheel: started 2024-04-17T05:17:48,870 Running command Getting requirements to build wheel 2024-04-17T05:17:49,690 running egg_info 2024-04-17T05:17:49,695 writing countess.egg-info/PKG-INFO 2024-04-17T05:17:49,703 writing dependency_links to countess.egg-info/dependency_links.txt 2024-04-17T05:17:49,706 writing entry points to countess.egg-info/entry_points.txt 2024-04-17T05:17:49,711 writing requirements to countess.egg-info/requires.txt 2024-04-17T05:17:49,713 writing top-level names to countess.egg-info/top_level.txt 2024-04-17T05:17:49,739 reading manifest file 'countess.egg-info/SOURCES.txt' 2024-04-17T05:17:49,744 reading manifest template 'MANIFEST.in' 2024-04-17T05:17:49,746 adding license file 'LICENSE.txt' 2024-04-17T05:17:49,750 writing manifest file 'countess.egg-info/SOURCES.txt' 2024-04-17T05:17:49,846 Getting requirements to build wheel: finished with status 'done' 2024-04-17T05:17:49,857 Installing backend dependencies: started 2024-04-17T05:17:49,858 Running command pip subprocess to install backend dependencies 2024-04-17T05:17:51,909 Using pip 24.0 from /usr/local/lib/python3.9/dist-packages/pip (python 3.9) 2024-04-17T05:17:52,536 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-04-17T05:17:52,897 Collecting wheel 2024-04-17T05:17:52,925 Using cached https://www.piwheels.org/simple/wheel/wheel-0.43.0-py3-none-any.whl (65 kB) 2024-04-17T05:17:54,800 Installing collected packages: wheel 2024-04-17T05:17:55,077 Creating /tmp/pip-build-env-tdcfxb26/normal/bin 2024-04-17T05:17:55,081 changing mode of /tmp/pip-build-env-tdcfxb26/normal/bin/wheel to 755 2024-04-17T05:17:55,099 Successfully installed wheel-0.43.0 2024-04-17T05:17:55,501 Installing backend dependencies: finished with status 'done' 2024-04-17T05:17:55,503 Created temporary directory: /tmp/pip-modern-metadata-v5vgf9gl 2024-04-17T05:17:55,506 Preparing metadata (pyproject.toml): started 2024-04-17T05:17:55,507 Running command Preparing metadata (pyproject.toml) 2024-04-17T05:17:56,367 running dist_info 2024-04-17T05:17:56,373 creating /tmp/pip-modern-metadata-v5vgf9gl/countess.egg-info 2024-04-17T05:17:56,378 writing /tmp/pip-modern-metadata-v5vgf9gl/countess.egg-info/PKG-INFO 2024-04-17T05:17:56,387 writing dependency_links to /tmp/pip-modern-metadata-v5vgf9gl/countess.egg-info/dependency_links.txt 2024-04-17T05:17:56,390 writing entry points to /tmp/pip-modern-metadata-v5vgf9gl/countess.egg-info/entry_points.txt 2024-04-17T05:17:56,395 writing requirements to /tmp/pip-modern-metadata-v5vgf9gl/countess.egg-info/requires.txt 2024-04-17T05:17:56,396 writing top-level names to /tmp/pip-modern-metadata-v5vgf9gl/countess.egg-info/top_level.txt 2024-04-17T05:17:56,397 writing manifest file '/tmp/pip-modern-metadata-v5vgf9gl/countess.egg-info/SOURCES.txt' 2024-04-17T05:17:56,425 reading manifest file '/tmp/pip-modern-metadata-v5vgf9gl/countess.egg-info/SOURCES.txt' 2024-04-17T05:17:56,427 reading manifest template 'MANIFEST.in' 2024-04-17T05:17:56,431 adding license file 'LICENSE.txt' 2024-04-17T05:17:56,434 writing manifest file '/tmp/pip-modern-metadata-v5vgf9gl/countess.egg-info/SOURCES.txt' 2024-04-17T05:17:56,435 creating '/tmp/pip-modern-metadata-v5vgf9gl/countess-0.0.60.dist-info' 2024-04-17T05:17:56,578 Preparing metadata (pyproject.toml): finished with status 'done' 2024-04-17T05:17:56,585 Source in /tmp/pip-wheel-b5nvfxxc/countess_85306931e05a4671ae73441af94f4e20 has version 0.0.60, which satisfies requirement countess==0.0.60 from https://files.pythonhosted.org/packages/9d/3c/8a9911be48c8adce41c6303474642d4dce9c451cd114b5c640a3134f76b8/countess-0.0.60.tar.gz 2024-04-17T05:17:56,586 Removed countess==0.0.60 from https://files.pythonhosted.org/packages/9d/3c/8a9911be48c8adce41c6303474642d4dce9c451cd114b5c640a3134f76b8/countess-0.0.60.tar.gz from build tracker '/tmp/pip-build-tracker-i_dg1899' 2024-04-17T05:17:56,591 Created temporary directory: /tmp/pip-unpack-zo0w_pv4 2024-04-17T05:17:56,592 Created temporary directory: /tmp/pip-unpack-c35e1zcc 2024-04-17T05:17:56,640 Building wheels for collected packages: countess 2024-04-17T05:17:56,645 Created temporary directory: /tmp/pip-wheel-ldz44i9s 2024-04-17T05:17:56,645 Destination directory: /tmp/pip-wheel-ldz44i9s 2024-04-17T05:17:56,647 Building wheel for countess (pyproject.toml): started 2024-04-17T05:17:56,648 Running command Building wheel for countess (pyproject.toml) 2024-04-17T05:17:57,496 running bdist_wheel 2024-04-17T05:17:57,520 running build 2024-04-17T05:17:57,520 running build_py 2024-04-17T05:17:57,526 creating build 2024-04-17T05:17:57,527 creating build/lib 2024-04-17T05:17:57,527 creating build/lib/countess 2024-04-17T05:17:57,528 copying countess/__init__.py -> build/lib/countess 2024-04-17T05:17:57,531 creating build/lib/countess/core 2024-04-17T05:17:57,532 copying countess/core/parameters.py -> build/lib/countess/core 2024-04-17T05:17:57,535 copying countess/core/cmd.py -> build/lib/countess/core 2024-04-17T05:17:57,536 copying countess/core/pipeline.py -> build/lib/countess/core 2024-04-17T05:17:57,539 copying countess/core/__init__.py -> build/lib/countess/core 2024-04-17T05:17:57,540 copying countess/core/config.py -> build/lib/countess/core 2024-04-17T05:17:57,542 copying countess/core/plugins.py -> build/lib/countess/core 2024-04-17T05:17:57,544 copying countess/core/logger.py -> build/lib/countess/core 2024-04-17T05:17:57,547 creating build/lib/countess/gui 2024-04-17T05:17:57,548 copying countess/gui/widgets.py -> build/lib/countess/gui 2024-04-17T05:17:57,550 copying countess/gui/tabular.py -> build/lib/countess/gui 2024-04-17T05:17:57,552 copying countess/gui/main.py -> build/lib/countess/gui 2024-04-17T05:17:57,555 copying countess/gui/tree.py -> build/lib/countess/gui 2024-04-17T05:17:57,557 copying countess/gui/__init__.py -> build/lib/countess/gui 2024-04-17T05:17:57,559 copying countess/gui/config.py -> build/lib/countess/gui 2024-04-17T05:17:57,561 copying countess/gui/mini_browser.py -> build/lib/countess/gui 2024-04-17T05:17:57,563 copying countess/gui/logger.py -> build/lib/countess/gui 2024-04-17T05:17:57,566 creating build/lib/countess/plugins 2024-04-17T05:17:57,567 copying countess/plugins/mutagenize.py -> build/lib/countess/plugins 2024-04-17T05:17:57,569 copying countess/plugins/join.py -> build/lib/countess/plugins 2024-04-17T05:17:57,571 copying countess/plugins/correlation.py -> build/lib/countess/plugins 2024-04-17T05:17:57,573 copying countess/plugins/variant.py -> build/lib/countess/plugins 2024-04-17T05:17:57,575 copying countess/plugins/regex.py -> build/lib/countess/plugins 2024-04-17T05:17:57,577 copying countess/plugins/column.py -> build/lib/countess/plugins 2024-04-17T05:17:57,579 copying countess/plugins/sequence.py -> build/lib/countess/plugins 2024-04-17T05:17:57,581 copying countess/plugins/hgvs_parser.py -> build/lib/countess/plugins 2024-04-17T05:17:57,583 copying countess/plugins/collate.py -> build/lib/countess/plugins 2024-04-17T05:17:57,584 copying countess/plugins/fastq.py -> build/lib/countess/plugins 2024-04-17T05:17:57,586 copying countess/plugins/csv.py -> build/lib/countess/plugins 2024-04-17T05:17:57,588 copying countess/plugins/pivot.py -> build/lib/countess/plugins 2024-04-17T05:17:57,590 copying countess/plugins/__init__.py -> build/lib/countess/plugins 2024-04-17T05:17:57,591 copying countess/plugins/group_by.py -> build/lib/countess/plugins 2024-04-17T05:17:57,593 copying countess/plugins/expression.py -> build/lib/countess/plugins 2024-04-17T05:17:57,595 copying countess/plugins/python.py -> build/lib/countess/plugins 2024-04-17T05:17:57,597 copying countess/plugins/data_table.py -> build/lib/countess/plugins 2024-04-17T05:17:57,599 creating build/lib/countess/utils 2024-04-17T05:17:57,600 copying countess/utils/variant.py -> build/lib/countess/utils 2024-04-17T05:17:57,602 copying countess/utils/parallel.py -> build/lib/countess/utils 2024-04-17T05:17:57,604 copying countess/utils/__init__.py -> build/lib/countess/utils 2024-04-17T05:17:57,605 copying countess/utils/pandas.py -> build/lib/countess/utils 2024-04-17T05:17:57,607 running egg_info 2024-04-17T05:17:57,612 writing countess.egg-info/PKG-INFO 2024-04-17T05:17:57,621 writing dependency_links to countess.egg-info/dependency_links.txt 2024-04-17T05:17:57,623 writing entry points to countess.egg-info/entry_points.txt 2024-04-17T05:17:57,628 writing requirements to countess.egg-info/requires.txt 2024-04-17T05:17:57,629 writing top-level names to countess.egg-info/top_level.txt 2024-04-17T05:17:57,643 reading manifest file 'countess.egg-info/SOURCES.txt' 2024-04-17T05:17:57,646 reading manifest template 'MANIFEST.in' 2024-04-17T05:17:57,648 adding license file 'LICENSE.txt' 2024-04-17T05:17:57,653 writing manifest file 'countess.egg-info/SOURCES.txt' 2024-04-17T05:17:57,655 /tmp/pip-build-env-tdcfxb26/overlay/lib/python3.9/site-packages/setuptools/command/build_py.py:207: _Warning: Package 'countess.gui.icons' is absent from the `packages` configuration. 2024-04-17T05:17:57,656 !! 2024-04-17T05:17:57,656 ******************************************************************************** 2024-04-17T05:17:57,656 ############################ 2024-04-17T05:17:57,656 # Package would be ignored # 2024-04-17T05:17:57,656 ############################ 2024-04-17T05:17:57,656 Python recognizes 'countess.gui.icons' as an importable package[^1], 2024-04-17T05:17:57,657 but it is absent from setuptools' `packages` configuration. 2024-04-17T05:17:57,657 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-17T05:17:57,657 package, please make sure that 'countess.gui.icons' is explicitly added 2024-04-17T05:17:57,657 to the `packages` configuration field. 2024-04-17T05:17:57,657 Alternatively, you can also rely on setuptools' discovery methods 2024-04-17T05:17:57,657 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-17T05:17:57,658 instead of `find_packages(...)`/`find:`). 2024-04-17T05:17:57,658 You can read more about "package discovery" on setuptools documentation page: 2024-04-17T05:17:57,658 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-17T05:17:57,658 If you don't want 'countess.gui.icons' to be distributed and are 2024-04-17T05:17:57,659 already explicitly excluding 'countess.gui.icons' via 2024-04-17T05:17:57,659 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-17T05:17:57,659 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-17T05:17:57,659 combination with a more fine grained `package-data` configuration. 2024-04-17T05:17:57,659 You can read more about "package data files" on setuptools documentation page: 2024-04-17T05:17:57,659 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-17T05:17:57,660 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-17T05:17:57,660 even if it does not contain any `.py` files. 2024-04-17T05:17:57,660 On the other hand, currently there is no concept of package data 2024-04-17T05:17:57,660 directory, all directories are treated like packages. 2024-04-17T05:17:57,660 ******************************************************************************** 2024-04-17T05:17:57,661 !! 2024-04-17T05:17:57,661 check.warn(importable) 2024-04-17T05:17:57,661 copying countess/py.typed -> build/lib/countess 2024-04-17T05:17:57,663 creating build/lib/countess/gui/icons 2024-04-17T05:17:57,663 copying countess/gui/icons/add.gif -> build/lib/countess/gui/icons 2024-04-17T05:17:57,666 copying countess/gui/icons/check.gif -> build/lib/countess/gui/icons 2024-04-17T05:17:57,668 copying countess/gui/icons/countess.gif -> build/lib/countess/gui/icons 2024-04-17T05:17:57,671 copying countess/gui/icons/del.gif -> build/lib/countess/gui/icons 2024-04-17T05:17:57,673 copying countess/gui/icons/hbar.gif -> build/lib/countess/gui/icons 2024-04-17T05:17:57,675 copying countess/gui/icons/info.gif -> build/lib/countess/gui/icons 2024-04-17T05:17:57,677 copying countess/gui/icons/redbar.gif -> build/lib/countess/gui/icons 2024-04-17T05:17:57,679 copying countess/gui/icons/sort_dn.gif -> build/lib/countess/gui/icons 2024-04-17T05:17:57,680 copying countess/gui/icons/sort_un.gif -> build/lib/countess/gui/icons 2024-04-17T05:17:57,682 copying countess/gui/icons/sort_up.gif -> build/lib/countess/gui/icons 2024-04-17T05:17:57,684 copying countess/gui/icons/uncheck.gif -> build/lib/countess/gui/icons 2024-04-17T05:17:57,686 copying countess/gui/icons/vbar.gif -> build/lib/countess/gui/icons 2024-04-17T05:17:57,701 installing to build/bdist.linux-armv7l/wheel 2024-04-17T05:17:57,701 running install 2024-04-17T05:17:57,727 running install_lib 2024-04-17T05:17:57,733 creating build/bdist.linux-armv7l 2024-04-17T05:17:57,733 creating build/bdist.linux-armv7l/wheel 2024-04-17T05:17:57,735 creating build/bdist.linux-armv7l/wheel/countess 2024-04-17T05:17:57,736 creating build/bdist.linux-armv7l/wheel/countess/plugins 2024-04-17T05:17:57,737 copying build/lib/countess/plugins/mutagenize.py -> build/bdist.linux-armv7l/wheel/countess/plugins 2024-04-17T05:17:57,739 copying build/lib/countess/plugins/join.py -> build/bdist.linux-armv7l/wheel/countess/plugins 2024-04-17T05:17:57,741 copying build/lib/countess/plugins/correlation.py -> build/bdist.linux-armv7l/wheel/countess/plugins 2024-04-17T05:17:57,743 copying build/lib/countess/plugins/variant.py -> build/bdist.linux-armv7l/wheel/countess/plugins 2024-04-17T05:17:57,745 copying build/lib/countess/plugins/regex.py -> build/bdist.linux-armv7l/wheel/countess/plugins 2024-04-17T05:17:57,747 copying build/lib/countess/plugins/column.py -> build/bdist.linux-armv7l/wheel/countess/plugins 2024-04-17T05:17:57,749 copying build/lib/countess/plugins/sequence.py -> build/bdist.linux-armv7l/wheel/countess/plugins 2024-04-17T05:17:57,750 copying build/lib/countess/plugins/hgvs_parser.py -> build/bdist.linux-armv7l/wheel/countess/plugins 2024-04-17T05:17:57,752 copying build/lib/countess/plugins/collate.py -> build/bdist.linux-armv7l/wheel/countess/plugins 2024-04-17T05:17:57,754 copying build/lib/countess/plugins/fastq.py -> build/bdist.linux-armv7l/wheel/countess/plugins 2024-04-17T05:17:57,756 copying build/lib/countess/plugins/csv.py -> build/bdist.linux-armv7l/wheel/countess/plugins 2024-04-17T05:17:57,758 copying build/lib/countess/plugins/pivot.py -> build/bdist.linux-armv7l/wheel/countess/plugins 2024-04-17T05:17:57,760 copying build/lib/countess/plugins/__init__.py -> build/bdist.linux-armv7l/wheel/countess/plugins 2024-04-17T05:17:57,761 copying build/lib/countess/plugins/group_by.py -> build/bdist.linux-armv7l/wheel/countess/plugins 2024-04-17T05:17:57,763 copying build/lib/countess/plugins/expression.py -> build/bdist.linux-armv7l/wheel/countess/plugins 2024-04-17T05:17:57,765 copying build/lib/countess/plugins/python.py -> build/bdist.linux-armv7l/wheel/countess/plugins 2024-04-17T05:17:57,767 copying build/lib/countess/plugins/data_table.py -> build/bdist.linux-armv7l/wheel/countess/plugins 2024-04-17T05:17:57,769 creating build/bdist.linux-armv7l/wheel/countess/utils 2024-04-17T05:17:57,770 copying build/lib/countess/utils/variant.py -> build/bdist.linux-armv7l/wheel/countess/utils 2024-04-17T05:17:57,772 copying build/lib/countess/utils/parallel.py -> build/bdist.linux-armv7l/wheel/countess/utils 2024-04-17T05:17:57,774 copying build/lib/countess/utils/__init__.py -> build/bdist.linux-armv7l/wheel/countess/utils 2024-04-17T05:17:57,775 copying build/lib/countess/utils/pandas.py -> build/bdist.linux-armv7l/wheel/countess/utils 2024-04-17T05:17:57,778 creating build/bdist.linux-armv7l/wheel/countess/core 2024-04-17T05:17:57,778 copying build/lib/countess/core/parameters.py -> build/bdist.linux-armv7l/wheel/countess/core 2024-04-17T05:17:57,781 copying build/lib/countess/core/cmd.py -> build/bdist.linux-armv7l/wheel/countess/core 2024-04-17T05:17:57,782 copying build/lib/countess/core/pipeline.py -> build/bdist.linux-armv7l/wheel/countess/core 2024-04-17T05:17:57,785 copying build/lib/countess/core/__init__.py -> build/bdist.linux-armv7l/wheel/countess/core 2024-04-17T05:17:57,786 copying build/lib/countess/core/config.py -> build/bdist.linux-armv7l/wheel/countess/core 2024-04-17T05:17:57,788 copying build/lib/countess/core/plugins.py -> build/bdist.linux-armv7l/wheel/countess/core 2024-04-17T05:17:57,790 copying build/lib/countess/core/logger.py -> build/bdist.linux-armv7l/wheel/countess/core 2024-04-17T05:17:57,792 copying build/lib/countess/py.typed -> build/bdist.linux-armv7l/wheel/countess 2024-04-17T05:17:57,793 copying build/lib/countess/__init__.py -> build/bdist.linux-armv7l/wheel/countess 2024-04-17T05:17:57,796 creating build/bdist.linux-armv7l/wheel/countess/gui 2024-04-17T05:17:57,796 copying build/lib/countess/gui/widgets.py -> build/bdist.linux-armv7l/wheel/countess/gui 2024-04-17T05:17:57,799 copying build/lib/countess/gui/tabular.py -> build/bdist.linux-armv7l/wheel/countess/gui 2024-04-17T05:17:57,802 creating build/bdist.linux-armv7l/wheel/countess/gui/icons 2024-04-17T05:17:57,802 copying build/lib/countess/gui/icons/countess.gif -> build/bdist.linux-armv7l/wheel/countess/gui/icons 2024-04-17T05:17:57,805 copying build/lib/countess/gui/icons/info.gif -> build/bdist.linux-armv7l/wheel/countess/gui/icons 2024-04-17T05:17:57,806 copying build/lib/countess/gui/icons/check.gif -> build/bdist.linux-armv7l/wheel/countess/gui/icons 2024-04-17T05:17:57,808 copying build/lib/countess/gui/icons/hbar.gif -> build/bdist.linux-armv7l/wheel/countess/gui/icons 2024-04-17T05:17:57,809 copying build/lib/countess/gui/icons/del.gif -> build/bdist.linux-armv7l/wheel/countess/gui/icons 2024-04-17T05:17:57,811 copying build/lib/countess/gui/icons/add.gif -> build/bdist.linux-armv7l/wheel/countess/gui/icons 2024-04-17T05:17:57,813 copying build/lib/countess/gui/icons/sort_un.gif -> build/bdist.linux-armv7l/wheel/countess/gui/icons 2024-04-17T05:17:57,814 copying build/lib/countess/gui/icons/redbar.gif -> build/bdist.linux-armv7l/wheel/countess/gui/icons 2024-04-17T05:17:57,816 copying build/lib/countess/gui/icons/sort_dn.gif -> build/bdist.linux-armv7l/wheel/countess/gui/icons 2024-04-17T05:17:57,818 copying build/lib/countess/gui/icons/vbar.gif -> build/bdist.linux-armv7l/wheel/countess/gui/icons 2024-04-17T05:17:57,819 copying build/lib/countess/gui/icons/sort_up.gif -> build/bdist.linux-armv7l/wheel/countess/gui/icons 2024-04-17T05:17:57,825 copying build/lib/countess/gui/icons/uncheck.gif -> build/bdist.linux-armv7l/wheel/countess/gui/icons 2024-04-17T05:17:57,827 copying build/lib/countess/gui/main.py -> build/bdist.linux-armv7l/wheel/countess/gui 2024-04-17T05:17:57,830 copying build/lib/countess/gui/tree.py -> build/bdist.linux-armv7l/wheel/countess/gui 2024-04-17T05:17:57,832 copying build/lib/countess/gui/__init__.py -> build/bdist.linux-armv7l/wheel/countess/gui 2024-04-17T05:17:57,834 copying build/lib/countess/gui/config.py -> build/bdist.linux-armv7l/wheel/countess/gui 2024-04-17T05:17:57,836 copying build/lib/countess/gui/mini_browser.py -> build/bdist.linux-armv7l/wheel/countess/gui 2024-04-17T05:17:57,838 copying build/lib/countess/gui/logger.py -> build/bdist.linux-armv7l/wheel/countess/gui 2024-04-17T05:17:57,840 running install_egg_info 2024-04-17T05:17:57,845 Copying countess.egg-info to build/bdist.linux-armv7l/wheel/countess-0.0.60-py3.9.egg-info 2024-04-17T05:17:57,855 running install_scripts 2024-04-17T05:17:57,876 creating build/bdist.linux-armv7l/wheel/countess-0.0.60.dist-info/WHEEL 2024-04-17T05:17:57,879 creating '/tmp/pip-wheel-ldz44i9s/.tmp-ur3wl07j/countess-0.0.60-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-04-17T05:17:57,881 adding 'countess/__init__.py' 2024-04-17T05:17:57,882 adding 'countess/py.typed' 2024-04-17T05:17:57,884 adding 'countess/core/__init__.py' 2024-04-17T05:17:57,885 adding 'countess/core/cmd.py' 2024-04-17T05:17:57,886 adding 'countess/core/config.py' 2024-04-17T05:17:57,888 adding 'countess/core/logger.py' 2024-04-17T05:17:57,890 adding 'countess/core/parameters.py' 2024-04-17T05:17:57,893 adding 'countess/core/pipeline.py' 2024-04-17T05:17:57,896 adding 'countess/core/plugins.py' 2024-04-17T05:17:57,898 adding 'countess/gui/__init__.py' 2024-04-17T05:17:57,900 adding 'countess/gui/config.py' 2024-04-17T05:17:57,902 adding 'countess/gui/logger.py' 2024-04-17T05:17:57,905 adding 'countess/gui/main.py' 2024-04-17T05:17:57,906 adding 'countess/gui/mini_browser.py' 2024-04-17T05:17:57,908 adding 'countess/gui/tabular.py' 2024-04-17T05:17:57,912 adding 'countess/gui/tree.py' 2024-04-17T05:17:57,913 adding 'countess/gui/widgets.py' 2024-04-17T05:17:57,915 adding 'countess/gui/icons/add.gif' 2024-04-17T05:17:57,916 adding 'countess/gui/icons/check.gif' 2024-04-17T05:17:57,919 adding 'countess/gui/icons/countess.gif' 2024-04-17T05:17:57,920 adding 'countess/gui/icons/del.gif' 2024-04-17T05:17:57,921 adding 'countess/gui/icons/hbar.gif' 2024-04-17T05:17:57,922 adding 'countess/gui/icons/info.gif' 2024-04-17T05:17:57,923 adding 'countess/gui/icons/redbar.gif' 2024-04-17T05:17:57,925 adding 'countess/gui/icons/sort_dn.gif' 2024-04-17T05:17:57,926 adding 'countess/gui/icons/sort_un.gif' 2024-04-17T05:17:57,927 adding 'countess/gui/icons/sort_up.gif' 2024-04-17T05:17:57,928 adding 'countess/gui/icons/uncheck.gif' 2024-04-17T05:17:57,929 adding 'countess/gui/icons/vbar.gif' 2024-04-17T05:17:57,931 adding 'countess/plugins/__init__.py' 2024-04-17T05:17:57,932 adding 'countess/plugins/collate.py' 2024-04-17T05:17:57,933 adding 'countess/plugins/column.py' 2024-04-17T05:17:57,935 adding 'countess/plugins/correlation.py' 2024-04-17T05:17:57,936 adding 'countess/plugins/csv.py' 2024-04-17T05:17:57,938 adding 'countess/plugins/data_table.py' 2024-04-17T05:17:57,939 adding 'countess/plugins/expression.py' 2024-04-17T05:17:57,940 adding 'countess/plugins/fastq.py' 2024-04-17T05:17:57,942 adding 'countess/plugins/group_by.py' 2024-04-17T05:17:57,943 adding 'countess/plugins/hgvs_parser.py' 2024-04-17T05:17:57,945 adding 'countess/plugins/join.py' 2024-04-17T05:17:57,946 adding 'countess/plugins/mutagenize.py' 2024-04-17T05:17:57,947 adding 'countess/plugins/pivot.py' 2024-04-17T05:17:57,949 adding 'countess/plugins/python.py' 2024-04-17T05:17:57,950 adding 'countess/plugins/regex.py' 2024-04-17T05:17:57,952 adding 'countess/plugins/sequence.py' 2024-04-17T05:17:57,953 adding 'countess/plugins/variant.py' 2024-04-17T05:17:57,955 adding 'countess/utils/__init__.py' 2024-04-17T05:17:57,956 adding 'countess/utils/pandas.py' 2024-04-17T05:17:57,957 adding 'countess/utils/parallel.py' 2024-04-17T05:17:57,960 adding 'countess/utils/variant.py' 2024-04-17T05:17:57,962 adding 'countess-0.0.60.dist-info/LICENSE.txt' 2024-04-17T05:17:57,963 adding 'countess-0.0.60.dist-info/METADATA' 2024-04-17T05:17:57,964 adding 'countess-0.0.60.dist-info/WHEEL' 2024-04-17T05:17:57,965 adding 'countess-0.0.60.dist-info/entry_points.txt' 2024-04-17T05:17:57,966 adding 'countess-0.0.60.dist-info/top_level.txt' 2024-04-17T05:17:57,968 adding 'countess-0.0.60.dist-info/RECORD' 2024-04-17T05:17:57,972 removing build/bdist.linux-armv7l/wheel 2024-04-17T05:17:58,088 Building wheel for countess (pyproject.toml): finished with status 'done' 2024-04-17T05:17:58,096 Created wheel for countess: filename=countess-0.0.60-py3-none-any.whl size=99550 sha256=906cd0a3893faf279a5bcd592dfbbc5d8d3385cf40639ecfddda81842d227711 2024-04-17T05:17:58,097 Stored in directory: /tmp/pip-ephem-wheel-cache-gfj694jg/wheels/c4/75/70/26461bcc3f8d1b10b59a5aac1a46e92e27bf10ca71621d83b9 2024-04-17T05:17:58,110 Successfully built countess 2024-04-17T05:17:58,115 Removed build tracker: '/tmp/pip-build-tracker-i_dg1899'