2024-04-18T07:18:40,803 Created temporary directory: /tmp/pip-build-tracker-jcem7gdi 2024-04-18T07:18:40,804 Initialized build tracking at /tmp/pip-build-tracker-jcem7gdi 2024-04-18T07:18:40,804 Created build tracker: /tmp/pip-build-tracker-jcem7gdi 2024-04-18T07:18:40,805 Entered build tracker: /tmp/pip-build-tracker-jcem7gdi 2024-04-18T07:18:40,806 Created temporary directory: /tmp/pip-wheel-8aqqbq4p 2024-04-18T07:18:40,809 Created temporary directory: /tmp/pip-ephem-wheel-cache-50yihjtv 2024-04-18T07:18:40,831 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-04-18T07:18:40,835 2 location(s) to search for versions of funid: 2024-04-18T07:18:40,835 * https://pypi.org/simple/funid/ 2024-04-18T07:18:40,835 * https://www.piwheels.org/simple/funid/ 2024-04-18T07:18:40,835 Fetching project page and analyzing links: https://pypi.org/simple/funid/ 2024-04-18T07:18:40,836 Getting page https://pypi.org/simple/funid/ 2024-04-18T07:18:40,838 Found index url https://pypi.org/simple/ 2024-04-18T07:18:41,058 Fetched page https://pypi.org/simple/funid/ as application/vnd.pypi.simple.v1+json 2024-04-18T07:18:41,072 Link requires a different Python (3.11.2 not in: '<3.11, >3.8'): https://files.pythonhosted.org/packages/b0/d0/b9677ff882d01786ca1981c74fefbb390901732cac86cb16d066cfbcee73/FunID-0.3.0.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,073 Skipping link: 0.3.0 Requires-Python <3.11, >3.8: https://files.pythonhosted.org/packages/b0/d0/b9677ff882d01786ca1981c74fefbb390901732cac86cb16d066cfbcee73/FunID-0.3.0.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,073 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/6a/08/2bccf4d17d6297e5c52bcba4eda5d5a1ed634eeb4c048a6a0492bf26f0e2/FunID-0.3.2-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,074 Link requires a different Python (3.11.2 not in: '<3.11, >3.8'): https://files.pythonhosted.org/packages/4f/38/873f19b14c7c4ddfcd7f26ae1d2bd8a785a00b43931b2495493aa52029ff/FunID-0.3.2.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,075 Skipping link: 0.3.2 Requires-Python <3.11, >3.8: https://files.pythonhosted.org/packages/4f/38/873f19b14c7c4ddfcd7f26ae1d2bd8a785a00b43931b2495493aa52029ff/FunID-0.3.2.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,076 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/77/47/e4d4394d3df8130a967d730b209ee08f0563e8c07d358e0938084ea2c238/FunID-0.3.2.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2024-04-18T07:18:41,077 Link requires a different Python (3.11.2 not in: '<=3.11, >3.8'): https://files.pythonhosted.org/packages/17/c7/bcd0e755fa5647dda4672ae9fd88f94d590c796d5312b2839b1e00beea1b/FunID-0.3.2.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2024-04-18T07:18:41,078 Skipping link: 0.3.2.1 Requires-Python <=3.11, >3.8: https://files.pythonhosted.org/packages/17/c7/bcd0e755fa5647dda4672ae9fd88f94d590c796d5312b2839b1e00beea1b/FunID-0.3.2.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2024-04-18T07:18:41,078 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/20/65/dd3f11ff95c939d1894a81682d820f36a991bcf8f100b19982da1b3787ba/FunID-0.3.3.0-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2024-04-18T07:18:41,079 Link requires a different Python (3.11.2 not in: '<=3.11, >3.8'): https://files.pythonhosted.org/packages/48/62/211e51aabf536101577540574d126849837a43fa07e8c7c79ec79378bf30/FunID-0.3.3.0.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2024-04-18T07:18:41,080 Skipping link: 0.3.3.0 Requires-Python <=3.11, >3.8: https://files.pythonhosted.org/packages/48/62/211e51aabf536101577540574d126849837a43fa07e8c7c79ec79378bf30/FunID-0.3.3.0.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2024-04-18T07:18:41,081 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/31/96/b453dc34699170a20a00aa02e9a0eeb511d75494b88bef72641a7f4aabe1/FunID-0.3.3.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2024-04-18T07:18:41,082 Link requires a different Python (3.11.2 not in: '<=3.11, >3.8'): https://files.pythonhosted.org/packages/00/60/4a6fee9144f0fd461c9e04e3f27ac9bbe36c2b7e9b04ddb9159a2e83481d/FunID-0.3.3.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2024-04-18T07:18:41,083 Skipping link: 0.3.3.1 Requires-Python <=3.11, >3.8: https://files.pythonhosted.org/packages/00/60/4a6fee9144f0fd461c9e04e3f27ac9bbe36c2b7e9b04ddb9159a2e83481d/FunID-0.3.3.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2024-04-18T07:18:41,083 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/27/55/5e0509c9b25f2d457da174c47bc4b191e7703d59ce32882ce03496ee35a7/FunID-0.3.4-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2024-04-18T07:18:41,084 Link requires a different Python (3.11.2 not in: '<=3.11, >3.8'): https://files.pythonhosted.org/packages/6d/2c/1a624a74aadc70a913197e0a7720007b2f952668ca497fdeeb9737699d8f/FunID-0.3.4.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2024-04-18T07:18:41,085 Skipping link: 0.3.4 Requires-Python <=3.11, >3.8: https://files.pythonhosted.org/packages/6d/2c/1a624a74aadc70a913197e0a7720007b2f952668ca497fdeeb9737699d8f/FunID-0.3.4.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2024-04-18T07:18:41,085 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/5b/e0/d8b28a15adbb933eea238e2b955d474c3fb6aa73c904d6b372f56f30474c/FunID-0.3.5-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2024-04-18T07:18:41,086 Link requires a different Python (3.11.2 not in: '<=3.11, >3.8'): https://files.pythonhosted.org/packages/4e/f7/ff0895811673a7bd1da49a359d093810346659be5ac54140b2fbb5e199fc/FunID-0.3.5.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2024-04-18T07:18:41,087 Skipping link: 0.3.5 Requires-Python <=3.11, >3.8: https://files.pythonhosted.org/packages/4e/f7/ff0895811673a7bd1da49a359d093810346659be5ac54140b2fbb5e199fc/FunID-0.3.5.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<=3.11, >3.8) 2024-04-18T07:18:41,087 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/b7/27/c64985b174cbfa662e2109d838292a69d1669ad6a3a36294ee03ce81ef2a/FunID-0.3.6.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,088 Link requires a different Python (3.11.2 not in: '<3.11, >3.8'): https://files.pythonhosted.org/packages/7c/19/cc41c29a0bc630bdc8a5ff93bb58cacc1ae756280b353b6b78d39c52bc85/FunID-0.3.6.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,089 Skipping link: 0.3.6.1 Requires-Python <3.11, >3.8: https://files.pythonhosted.org/packages/7c/19/cc41c29a0bc630bdc8a5ff93bb58cacc1ae756280b353b6b78d39c52bc85/FunID-0.3.6.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,089 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/1f/44/739693947517bbc2e128df01ee142d72ee3358f7cc7daba4a3759fbf34bd/FunID-0.3.7-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,090 Link requires a different Python (3.11.2 not in: '<3.11, >3.8'): https://files.pythonhosted.org/packages/a2/14/7ae571dd6e4b918e2a85ca1625481c5764c15f2f4ecebb64e738e4863c57/FunID-0.3.7.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,091 Skipping link: 0.3.7 Requires-Python <3.11, >3.8: https://files.pythonhosted.org/packages/a2/14/7ae571dd6e4b918e2a85ca1625481c5764c15f2f4ecebb64e738e4863c57/FunID-0.3.7.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,092 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/89/e3/e48669d0fdeafd9b79bcd3b601ed05547df828c6f5a3cd0d733e28289738/FunID-0.3.8-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,092 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/f4/45/d1bc4761848b0f4ece4dc47311a91a7e85668eb49b3bbc86843e4508dbc1/FunID-0.3.8.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,093 Link requires a different Python (3.11.2 not in: '<3.11, >3.8'): https://files.pythonhosted.org/packages/42/29/96fc938318a3c5b62670cb0efc021fea7f8257e825f9bc62aad02087bde5/FunID-0.3.8.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,094 Skipping link: 0.3.8.1 Requires-Python <3.11, >3.8: https://files.pythonhosted.org/packages/42/29/96fc938318a3c5b62670cb0efc021fea7f8257e825f9bc62aad02087bde5/FunID-0.3.8.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,094 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/f9/05/5a5739948741051441923681ab8f41aeb24b4b67aee087e3911831cd397a/FunID-0.3.8.2-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,095 Link requires a different Python (3.11.2 not in: '<3.11, >3.8'): https://files.pythonhosted.org/packages/4a/4a/3bf498c2707726c16177fb6d5e4c1fb6b942aa0f857378f22345cee709b9/FunID-0.3.8.2.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,096 Skipping link: 0.3.8.2 Requires-Python <3.11, >3.8: https://files.pythonhosted.org/packages/4a/4a/3bf498c2707726c16177fb6d5e4c1fb6b942aa0f857378f22345cee709b9/FunID-0.3.8.2.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,096 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/51/ac/f8561c5c3715309d959188f62cef662154c247362fa548893dda38582f08/FunID-0.3.9-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,097 Link requires a different Python (3.11.2 not in: '<3.11, >3.8'): https://files.pythonhosted.org/packages/de/4c/ef736f335f2da1f2acbe16932bac1a03e2a46f7fd26e01f7d4a5b30d1a35/FunID-0.3.9.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,098 Skipping link: 0.3.9 Requires-Python <3.11, >3.8: https://files.pythonhosted.org/packages/de/4c/ef736f335f2da1f2acbe16932bac1a03e2a46f7fd26e01f7d4a5b30d1a35/FunID-0.3.9.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,099 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/26/59/dd98aa71ec91f80ff255b9177e7c3705f2352298dc8bb48bfa492d8304e3/FunID-0.3.10.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,100 Link requires a different Python (3.11.2 not in: '<3.11, >3.8'): https://files.pythonhosted.org/packages/da/ef/a3b426feaf718c30c259c165124120c3192833b4c356a8a10efa909ac4b7/FunID-0.3.10.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,101 Skipping link: 0.3.10.1 Requires-Python <3.11, >3.8: https://files.pythonhosted.org/packages/da/ef/a3b426feaf718c30c259c165124120c3192833b4c356a8a10efa909ac4b7/FunID-0.3.10.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,101 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/17/b5/c3439f3af84951ffe85ed70190fdc02a33ab0e435a934a02c08f49505642/FunID-0.3.11-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,102 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/82/95/47d34ff9a0cc4a13e411dda8b40535efd54149fd259ef126246e6fd7ecdb/FunID-0.3.11.0-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,103 Link requires a different Python (3.11.2 not in: '<3.11, >3.8'): https://files.pythonhosted.org/packages/84/c2/3278912b3d3b883be4b40dc072f732f708d5eb844046486762c6f9e7c772/FunID-0.3.11.0.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,104 Skipping link: 0.3.11.0 Requires-Python <3.11, >3.8: https://files.pythonhosted.org/packages/84/c2/3278912b3d3b883be4b40dc072f732f708d5eb844046486762c6f9e7c772/FunID-0.3.11.0.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,104 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/43/8c/a5bf3a512cb66117b0b8a83837a966dc2e3ce2c2bcb8570e5a35d3400392/FunID-0.3.11.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,105 Link requires a different Python (3.11.2 not in: '<3.11, >3.8'): https://files.pythonhosted.org/packages/ba/8a/83e56e593445f58c6b6137886a90beaedabcc59274a95ff56e9d1fd8ecdb/FunID-0.3.11.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,106 Skipping link: 0.3.11.1 Requires-Python <3.11, >3.8: https://files.pythonhosted.org/packages/ba/8a/83e56e593445f58c6b6137886a90beaedabcc59274a95ff56e9d1fd8ecdb/FunID-0.3.11.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,106 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/4c/68/28671e34d2c6358178f26a824fd61e89dfea1c3582366a9a5d27cfad6eef/FunID-0.3.12-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,107 Link requires a different Python (3.11.2 not in: '<3.11, >3.8'): https://files.pythonhosted.org/packages/98/5a/615914c19c41ddb727d869f81f69307ee01450ebb57ae2316d7b467cdf28/FunID-0.3.12.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,108 Skipping link: 0.3.12 Requires-Python <3.11, >3.8: 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https://files.pythonhosted.org/packages/3b/6c/924322893ac47a138a8ef1917967f6c2cad5d43dc2476387536f475683e2/FunID-0.3.16.2.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,128 Skipping link: 0.3.16.2 Requires-Python <3.11, >3.8: https://files.pythonhosted.org/packages/3b/6c/924322893ac47a138a8ef1917967f6c2cad5d43dc2476387536f475683e2/FunID-0.3.16.2.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,129 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/ca/6e/b43241d2134e62c2905ae4211987c7f475b086f5d14c9598b374da6b7643/FunID-0.3.16.3-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,130 Link requires a different Python (3.11.2 not in: '<3.11, >3.8'): https://files.pythonhosted.org/packages/6c/42/68a1d1daabee506277f5f575303bb71c65c62f7c080af08e69efd4b8b899/FunID-0.3.16.3.tar.gz (from 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https://files.pythonhosted.org/packages/36/99/0acb407a858148725accba5310910b1c46ebfb99680b4e80dee86380ff97/FunID-0.3.17.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,133 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/9c/38/4093b90b2d7788de5631a7296aab8dbe56c9a27779096103382b8251fa66/FunID-0.3.17.1-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,134 Link requires a different Python (3.11.2 not in: '<3.11, >3.8'): https://files.pythonhosted.org/packages/68/b6/fb358fc81f5e0bd42f64f4da5d4ec51978b9aa2b9dc56bae9c909209d53a/FunID-0.3.17.1.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,135 Skipping link: 0.3.17.1 Requires-Python <3.11, >3.8: https://files.pythonhosted.org/packages/68/b6/fb358fc81f5e0bd42f64f4da5d4ec51978b9aa2b9dc56bae9c909209d53a/FunID-0.3.17.1.tar.gz (from 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https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,145 Skipping link: 0.3.18.3 Requires-Python <3.11, >3.8: https://files.pythonhosted.org/packages/8c/c8/a75bef6e302336132f2fa412a0e387d0fc6c076863594b5fb0a0ee5c6147/FunID-0.3.18.3.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,146 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/5d/ed/73f57bd9cfe0738c729c4b2b7f1a0f7f85f00614f3b2cd6bbaf9337cb760/FunID-0.3.18.4-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,147 Link requires a different Python (3.11.2 not in: '<3.11, >3.8'): https://files.pythonhosted.org/packages/af/db/b341a2a2369f385f7de5cd1e6972f361f472b98c67d04441d0039367b845/FunID-0.3.18.4.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,147 Skipping link: 0.3.18.4 Requires-Python <3.11, >3.8: https://files.pythonhosted.org/packages/af/db/b341a2a2369f385f7de5cd1e6972f361f472b98c67d04441d0039367b845/FunID-0.3.18.4.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,148 Skipping link: No binaries permitted for funid: https://files.pythonhosted.org/packages/15/04/4df423e376ba5374a0bad69f9dffc5e182e156323bb2966b4a09f5b4e92a/FunID-0.3.18.5-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,149 Link requires a different Python (3.11.2 not in: '<3.11, >3.8'): https://files.pythonhosted.org/packages/f1/81/ee1190bea2ff4dd671345fe431101f580e8d4bb2708fe4e9db6275fbed85/FunID-0.3.18.5.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,150 Skipping link: 0.3.18.5 Requires-Python <3.11, >3.8: https://files.pythonhosted.org/packages/f1/81/ee1190bea2ff4dd671345fe431101f580e8d4bb2708fe4e9db6275fbed85/FunID-0.3.18.5.tar.gz (from 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https://files.pythonhosted.org/packages/65/e9/803fe58fcdf7f98d86eb915c201642f7774b7686d47745b666e0231e58ad/FunID-0.3.18.6.2-py2.py3-none-any.whl (from https://pypi.org/simple/funid/) (requires-python:<3.13,>3.8) 2024-04-18T07:18:41,154 Found link https://files.pythonhosted.org/packages/98/43/d26df383805b0ab655f0d1f312c4b87be88aa1ad2e4781387ae86cb53641/FunID-0.3.18.6.2.tar.gz (from https://pypi.org/simple/funid/) (requires-python:<3.13,>3.8), version: 0.3.18.6.2 2024-04-18T07:18:41,155 Fetching project page and analyzing links: https://www.piwheels.org/simple/funid/ 2024-04-18T07:18:41,156 Getting page https://www.piwheels.org/simple/funid/ 2024-04-18T07:18:41,158 Found index url https://www.piwheels.org/simple/ 2024-04-18T07:18:41,395 Fetched page https://www.piwheels.org/simple/funid/ as text/html 2024-04-18T07:18:41,405 Skipping link: No binaries permitted for funid: 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https://www.piwheels.org/simple/funid/FunID-0.3.0-py3-none-any.whl#sha256=e875a0092c43c61afaa8f12b92c67d0ae13e5a081dc0f494828474f50c67bfd2 (from https://www.piwheels.org/simple/funid/) (requires-python:<3.11, >3.8) 2024-04-18T07:18:41,425 Skipping link: not a file: https://www.piwheels.org/simple/funid/ 2024-04-18T07:18:41,426 Skipping link: not a file: https://pypi.org/simple/funid/ 2024-04-18T07:18:41,444 Given no hashes to check 1 links for project 'funid': discarding no candidates 2024-04-18T07:18:41,462 Collecting funid==0.3.18.6.2 2024-04-18T07:18:41,465 Created temporary directory: /tmp/pip-unpack-ii0vnof3 2024-04-18T07:18:41,697 Downloading FunID-0.3.18.6.2.tar.gz (52.9 MB) 2024-04-18T07:18:53,529 Added funid==0.3.18.6.2 from https://files.pythonhosted.org/packages/98/43/d26df383805b0ab655f0d1f312c4b87be88aa1ad2e4781387ae86cb53641/FunID-0.3.18.6.2.tar.gz to build tracker '/tmp/pip-build-tracker-jcem7gdi' 2024-04-18T07:18:53,531 Running setup.py (path:/tmp/pip-wheel-8aqqbq4p/funid_7f96b33125b34656ba84a7d9e7eeb90e/setup.py) egg_info for package funid 2024-04-18T07:18:53,532 Created temporary directory: /tmp/pip-pip-egg-info-6i55kg_k 2024-04-18T07:18:53,533 Preparing metadata (setup.py): started 2024-04-18T07:18:53,534 Running command python setup.py egg_info 2024-04-18T07:18:54,560 {'name': 'FunID', 'version': '0.3.18.6.2', 'description': 'Fungal Identification Pipeline', 'author': 'Changwan Seo', 'author_email': 'wan101010@snu.ac.kr', 'url': 'https://github.com/Changwanseo/FunID', 'python_requires': '<3.13, >3.8', 'packages': ['funid', 'funid.src', 'funid.data', 'funid.test_dataset', 'funid.preset'], 'install_requires': ['biopython==1.78', 'ete3==3.1.3', 'Cython', 'dendropy', 'GenMine>=1.0.10', 'lxml', 'matplotlib', 'numpy', 'openpyxl==3.0.9', 'pandas==1.4.2', 'plotly==5.9.0', 'psutil', 'PyQt5', 'pyyaml', 'sip>=4.19.4', 'scikit-learn', 'scipy', 'tabulate', 'unidecode==1.2.0', 'xlrd==2.0.1', 'xlsxwriter', 'xmltodict==0.12.0'], 'zip_safe': False, 'entry_points': {'console_scripts': ['FunID = funid.main:main']}, 'package_dir': {'funid': 'funid'}, 'package_data': {'funid.data': ['*.xlsx', '*.txt'], 'funid.test_dataset': ['**'], 'funid.preset': ['**']}, 'include_package_data': True, 'license': 'GPL3'} 2024-04-18T07:18:54,560 running egg_info 2024-04-18T07:18:54,561 creating /tmp/pip-pip-egg-info-6i55kg_k/FunID.egg-info 2024-04-18T07:18:54,586 writing /tmp/pip-pip-egg-info-6i55kg_k/FunID.egg-info/PKG-INFO 2024-04-18T07:18:54,590 writing dependency_links to /tmp/pip-pip-egg-info-6i55kg_k/FunID.egg-info/dependency_links.txt 2024-04-18T07:18:54,592 writing entry points to /tmp/pip-pip-egg-info-6i55kg_k/FunID.egg-info/entry_points.txt 2024-04-18T07:18:54,593 writing requirements to /tmp/pip-pip-egg-info-6i55kg_k/FunID.egg-info/requires.txt 2024-04-18T07:18:54,594 writing top-level names to /tmp/pip-pip-egg-info-6i55kg_k/FunID.egg-info/top_level.txt 2024-04-18T07:18:54,596 writing manifest file '/tmp/pip-pip-egg-info-6i55kg_k/FunID.egg-info/SOURCES.txt' 2024-04-18T07:18:54,688 reading manifest file '/tmp/pip-pip-egg-info-6i55kg_k/FunID.egg-info/SOURCES.txt' 2024-04-18T07:18:54,690 adding license file 'LICENSE' 2024-04-18T07:18:54,692 writing manifest file '/tmp/pip-pip-egg-info-6i55kg_k/FunID.egg-info/SOURCES.txt' 2024-04-18T07:18:54,800 Preparing metadata (setup.py): finished with status 'done' 2024-04-18T07:18:54,804 Source in /tmp/pip-wheel-8aqqbq4p/funid_7f96b33125b34656ba84a7d9e7eeb90e has version 0.3.18.6.2, which satisfies requirement funid==0.3.18.6.2 from https://files.pythonhosted.org/packages/98/43/d26df383805b0ab655f0d1f312c4b87be88aa1ad2e4781387ae86cb53641/FunID-0.3.18.6.2.tar.gz 2024-04-18T07:18:54,804 Removed funid==0.3.18.6.2 from https://files.pythonhosted.org/packages/98/43/d26df383805b0ab655f0d1f312c4b87be88aa1ad2e4781387ae86cb53641/FunID-0.3.18.6.2.tar.gz from build tracker '/tmp/pip-build-tracker-jcem7gdi' 2024-04-18T07:18:54,810 Created temporary directory: /tmp/pip-unpack-8h_jqexq 2024-04-18T07:18:54,812 Created temporary directory: /tmp/pip-unpack-jy32llco 2024-04-18T07:18:54,837 Building wheels for collected packages: funid 2024-04-18T07:18:54,841 Created temporary directory: /tmp/pip-wheel-636saa3_ 2024-04-18T07:18:54,842 Building wheel for funid (setup.py): started 2024-04-18T07:18:54,843 Destination directory: /tmp/pip-wheel-636saa3_ 2024-04-18T07:18:54,843 Running command python setup.py bdist_wheel 2024-04-18T07:18:55,250 {'name': 'FunID', 'version': '0.3.18.6.2', 'description': 'Fungal Identification Pipeline', 'author': 'Changwan Seo', 'author_email': 'wan101010@snu.ac.kr', 'url': 'https://github.com/Changwanseo/FunID', 'python_requires': '<3.13, >3.8', 'packages': ['funid', 'funid.src', 'funid.data', 'funid.test_dataset', 'funid.preset'], 'install_requires': ['biopython==1.78', 'ete3==3.1.3', 'Cython', 'dendropy', 'GenMine>=1.0.10', 'lxml', 'matplotlib', 'numpy', 'openpyxl==3.0.9', 'pandas==1.4.2', 'plotly==5.9.0', 'psutil', 'PyQt5', 'pyyaml', 'sip>=4.19.4', 'scikit-learn', 'scipy', 'tabulate', 'unidecode==1.2.0', 'xlrd==2.0.1', 'xlsxwriter', 'xmltodict==0.12.0'], 'zip_safe': False, 'entry_points': {'console_scripts': ['FunID = funid.main:main']}, 'package_dir': {'funid': 'funid'}, 'package_data': {'funid.data': ['*.xlsx', '*.txt'], 'funid.test_dataset': ['**'], 'funid.preset': ['**']}, 'include_package_data': True, 'license': 'GPL3'} 2024-04-18T07:18:55,863 running bdist_wheel 2024-04-18T07:18:55,960 running build 2024-04-18T07:18:55,960 running build_py 2024-04-18T07:18:55,988 creating build 2024-04-18T07:18:55,988 creating build/lib 2024-04-18T07:18:55,989 creating build/lib/funid 2024-04-18T07:18:55,990 copying funid/FunID_GUI.py -> build/lib/funid 2024-04-18T07:18:55,993 copying funid/__init__.py -> build/lib/funid 2024-04-18T07:18:55,994 copying funid/main.py -> build/lib/funid 2024-04-18T07:18:55,997 creating build/lib/funid/src 2024-04-18T07:18:55,998 copying funid/src/dataset.py -> build/lib/funid/src 2024-04-18T07:18:56,001 copying funid/src/validate_option.py -> build/lib/funid/src 2024-04-18T07:18:56,004 copying funid/src/cluster.py -> build/lib/funid/src 2024-04-18T07:18:56,007 copying funid/src/ncbi.py -> build/lib/funid/src 2024-04-18T07:18:56,009 copying funid/src/command.py -> build/lib/funid/src 2024-04-18T07:18:56,011 copying funid/src/save.py -> build/lib/funid/src 2024-04-18T07:18:56,013 copying funid/src/logger.py -> build/lib/funid/src 2024-04-18T07:18:56,015 copying funid/src/reporter.py -> build/lib/funid/src 2024-04-18T07:18:56,018 copying funid/src/trim.py -> build/lib/funid/src 2024-04-18T07:18:56,020 copying funid/src/tree_interpretation_pipe.py -> build/lib/funid/src 2024-04-18T07:18:56,023 copying funid/src/search.py -> build/lib/funid/src 2024-04-18T07:18:56,025 copying funid/src/concatenate.py -> build/lib/funid/src 2024-04-18T07:18:56,027 copying funid/src/align.py -> build/lib/funid/src 2024-04-18T07:18:56,029 copying funid/src/tree_interpretation.py -> build/lib/funid/src 2024-04-18T07:18:56,033 copying funid/src/initialize.py -> build/lib/funid/src 2024-04-18T07:18:56,035 copying funid/src/opt_generator.py -> build/lib/funid/src 2024-04-18T07:18:56,036 copying funid/src/ext.py -> build/lib/funid/src 2024-04-18T07:18:56,039 copying funid/src/tree.py -> build/lib/funid/src 2024-04-18T07:18:56,041 copying funid/src/tool.py -> build/lib/funid/src 2024-04-18T07:18:56,043 copying funid/src/__init__.py -> build/lib/funid/src 2024-04-18T07:18:56,044 copying funid/src/modeltest.py -> build/lib/funid/src 2024-04-18T07:18:56,046 copying funid/src/hasher.py -> build/lib/funid/src 2024-04-18T07:18:56,048 copying funid/src/patch.py -> build/lib/funid/src 2024-04-18T07:18:56,050 copying funid/src/manage_input.py -> build/lib/funid/src 2024-04-18T07:18:56,052 copying funid/src/validation.py -> build/lib/funid/src 2024-04-18T07:18:56,054 copying funid/src/logics.py -> build/lib/funid/src 2024-04-18T07:18:56,056 creating build/lib/funid/data 2024-04-18T07:18:56,057 copying funid/data/__init__.py -> build/lib/funid/data 2024-04-18T07:18:56,060 running egg_info 2024-04-18T07:18:56,116 writing FunID.egg-info/PKG-INFO 2024-04-18T07:18:56,119 writing dependency_links to FunID.egg-info/dependency_links.txt 2024-04-18T07:18:56,121 writing entry points to FunID.egg-info/entry_points.txt 2024-04-18T07:18:56,122 writing requirements to FunID.egg-info/requires.txt 2024-04-18T07:18:56,123 writing top-level names to FunID.egg-info/top_level.txt 2024-04-18T07:18:56,160 reading manifest file 'FunID.egg-info/SOURCES.txt' 2024-04-18T07:18:56,171 adding license file 'LICENSE' 2024-04-18T07:18:56,178 writing manifest file 'FunID.egg-info/SOURCES.txt' 2024-04-18T07:18:56,181 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'funid.external' is absent from the `packages` configuration. 2024-04-18T07:18:56,182 !! 2024-04-18T07:18:56,183 ******************************************************************************** 2024-04-18T07:18:56,183 ############################ 2024-04-18T07:18:56,184 # Package would be ignored # 2024-04-18T07:18:56,184 ############################ 2024-04-18T07:18:56,185 Python recognizes 'funid.external' as an importable package[^1], 2024-04-18T07:18:56,186 but it is absent from setuptools' `packages` configuration. 2024-04-18T07:18:56,187 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-18T07:18:56,187 package, please make sure that 'funid.external' is explicitly added 2024-04-18T07:18:56,188 to the `packages` configuration field. 2024-04-18T07:18:56,188 Alternatively, you can also rely on setuptools' discovery methods 2024-04-18T07:18:56,189 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-18T07:18:56,189 instead of `find_packages(...)`/`find:`). 2024-04-18T07:18:56,190 You can read more about "package discovery" on setuptools documentation page: 2024-04-18T07:18:56,191 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-18T07:18:56,192 If you don't want 'funid.external' to be distributed and are 2024-04-18T07:18:56,192 already explicitly excluding 'funid.external' via 2024-04-18T07:18:56,192 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-18T07:18:56,193 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-18T07:18:56,193 combination with a more fine grained `package-data` configuration. 2024-04-18T07:18:56,194 You can read more about "package data files" on setuptools documentation page: 2024-04-18T07:18:56,195 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-18T07:18:56,196 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-18T07:18:56,197 even if it does not contain any `.py` files. 2024-04-18T07:18:56,198 On the other hand, currently there is no concept of package data 2024-04-18T07:18:56,198 directory, all directories are treated like packages. 2024-04-18T07:18:56,198 ******************************************************************************** 2024-04-18T07:18:56,199 !! 2024-04-18T07:18:56,200 check.warn(importable) 2024-04-18T07:18:56,200 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'funid.external.BLAST_Windows' is absent from the `packages` configuration. 2024-04-18T07:18:56,201 !! 2024-04-18T07:18:56,202 ******************************************************************************** 2024-04-18T07:18:56,202 ############################ 2024-04-18T07:18:56,202 # Package would be ignored # 2024-04-18T07:18:56,203 ############################ 2024-04-18T07:18:56,203 Python recognizes 'funid.external.BLAST_Windows' as an importable package[^1], 2024-04-18T07:18:56,204 but it is absent from setuptools' `packages` configuration. 2024-04-18T07:18:56,205 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-18T07:18:56,206 package, please make sure that 'funid.external.BLAST_Windows' is explicitly added 2024-04-18T07:18:56,206 to the `packages` configuration field. 2024-04-18T07:18:56,207 Alternatively, you can also rely on setuptools' discovery methods 2024-04-18T07:18:56,208 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-18T07:18:56,208 instead of `find_packages(...)`/`find:`). 2024-04-18T07:18:56,209 You can read more about "package discovery" on setuptools documentation page: 2024-04-18T07:18:56,210 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-18T07:18:56,211 If you don't want 'funid.external.BLAST_Windows' to be distributed and are 2024-04-18T07:18:56,212 already explicitly excluding 'funid.external.BLAST_Windows' via 2024-04-18T07:18:56,212 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-18T07:18:56,213 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-18T07:18:56,213 combination with a more fine grained `package-data` configuration. 2024-04-18T07:18:56,214 You can read more about "package data files" on setuptools documentation page: 2024-04-18T07:18:56,216 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-18T07:18:56,217 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-18T07:18:56,218 even if it does not contain any `.py` files. 2024-04-18T07:18:56,218 On the other hand, currently there is no concept of package data 2024-04-18T07:18:56,219 directory, all directories are treated like packages. 2024-04-18T07:18:56,219 ******************************************************************************** 2024-04-18T07:18:56,220 !! 2024-04-18T07:18:56,221 check.warn(importable) 2024-04-18T07:18:56,221 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'funid.external.BLAST_Windows.bin' is absent from the `packages` configuration. 2024-04-18T07:18:56,221 !! 2024-04-18T07:18:56,222 ******************************************************************************** 2024-04-18T07:18:56,223 ############################ 2024-04-18T07:18:56,223 # Package would be ignored # 2024-04-18T07:18:56,224 ############################ 2024-04-18T07:18:56,225 Python recognizes 'funid.external.BLAST_Windows.bin' as an importable package[^1], 2024-04-18T07:18:56,225 but it is absent from setuptools' `packages` configuration. 2024-04-18T07:18:56,226 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-18T07:18:56,227 package, please make sure that 'funid.external.BLAST_Windows.bin' is explicitly added 2024-04-18T07:18:56,227 to the `packages` configuration field. 2024-04-18T07:18:56,228 Alternatively, you can also rely on setuptools' discovery methods 2024-04-18T07:18:56,229 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-18T07:18:56,229 instead of `find_packages(...)`/`find:`). 2024-04-18T07:18:56,230 You can read more about "package discovery" on setuptools documentation page: 2024-04-18T07:18:56,231 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-18T07:18:56,232 If you don't want 'funid.external.BLAST_Windows.bin' to be distributed and are 2024-04-18T07:18:56,233 already explicitly excluding 'funid.external.BLAST_Windows.bin' via 2024-04-18T07:18:56,233 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-18T07:18:56,234 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-18T07:18:56,234 combination with a more fine grained `package-data` configuration. 2024-04-18T07:18:56,235 You can read more about "package data files" on setuptools documentation page: 2024-04-18T07:18:56,237 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-18T07:18:56,238 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-18T07:18:56,239 even if it does not contain any `.py` files. 2024-04-18T07:18:56,239 On the other hand, currently there is no concept of package data 2024-04-18T07:18:56,240 directory, all directories are treated like packages. 2024-04-18T07:18:56,240 ******************************************************************************** 2024-04-18T07:18:56,241 !! 2024-04-18T07:18:56,242 check.warn(importable) 2024-04-18T07:18:56,243 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'funid.external.BLAST_Windows.doc' is absent from the `packages` configuration. 2024-04-18T07:18:56,243 !! 2024-04-18T07:18:56,244 ******************************************************************************** 2024-04-18T07:18:56,245 ############################ 2024-04-18T07:18:56,245 # Package would be ignored # 2024-04-18T07:18:56,246 ############################ 2024-04-18T07:18:56,246 Python recognizes 'funid.external.BLAST_Windows.doc' as an importable package[^1], 2024-04-18T07:18:56,247 but it is absent from setuptools' `packages` configuration. 2024-04-18T07:18:56,248 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-18T07:18:56,248 package, please make sure that 'funid.external.BLAST_Windows.doc' is explicitly added 2024-04-18T07:18:56,249 to the `packages` configuration field. 2024-04-18T07:18:56,250 Alternatively, you can also rely on setuptools' discovery methods 2024-04-18T07:18:56,250 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-18T07:18:56,251 instead of `find_packages(...)`/`find:`). 2024-04-18T07:18:56,252 You can read more about "package discovery" on setuptools documentation page: 2024-04-18T07:18:56,253 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-18T07:18:56,254 If you don't want 'funid.external.BLAST_Windows.doc' to be distributed and are 2024-04-18T07:18:56,254 already explicitly excluding 'funid.external.BLAST_Windows.doc' via 2024-04-18T07:18:56,255 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-18T07:18:56,255 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-18T07:18:56,256 combination with a more fine grained `package-data` configuration. 2024-04-18T07:18:56,257 You can read more about "package data files" on setuptools documentation page: 2024-04-18T07:18:56,258 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-18T07:18:56,260 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-18T07:18:56,260 even if it does not contain any `.py` files. 2024-04-18T07:18:56,261 On the other hand, currently there is no concept of package data 2024-04-18T07:18:56,262 directory, all directories are treated like packages. 2024-04-18T07:18:56,262 ******************************************************************************** 2024-04-18T07:18:56,263 !! 2024-04-18T07:18:56,264 check.warn(importable) 2024-04-18T07:18:56,265 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'funid.external.FastTree_Windows' is absent from the `packages` configuration. 2024-04-18T07:18:56,265 !! 2024-04-18T07:18:56,267 ******************************************************************************** 2024-04-18T07:18:56,267 ############################ 2024-04-18T07:18:56,268 # Package would be ignored # 2024-04-18T07:18:56,268 ############################ 2024-04-18T07:18:56,269 Python recognizes 'funid.external.FastTree_Windows' as an importable package[^1], 2024-04-18T07:18:56,270 but it is absent from setuptools' `packages` configuration. 2024-04-18T07:18:56,271 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-18T07:18:56,271 package, please make sure that 'funid.external.FastTree_Windows' is explicitly added 2024-04-18T07:18:56,272 to the `packages` configuration field. 2024-04-18T07:18:56,273 Alternatively, you can also rely on setuptools' discovery methods 2024-04-18T07:18:56,274 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-18T07:18:56,275 instead of `find_packages(...)`/`find:`). 2024-04-18T07:18:56,276 You can read more about "package discovery" on setuptools documentation page: 2024-04-18T07:18:56,278 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-18T07:18:56,279 If you don't want 'funid.external.FastTree_Windows' to be distributed and are 2024-04-18T07:18:56,279 already explicitly excluding 'funid.external.FastTree_Windows' via 2024-04-18T07:18:56,280 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-18T07:18:56,280 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-18T07:18:56,281 combination with a more fine grained `package-data` configuration. 2024-04-18T07:18:56,282 You can read more about "package data files" on setuptools documentation page: 2024-04-18T07:18:56,283 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-18T07:18:56,284 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-18T07:18:56,284 even if it does not contain any `.py` files. 2024-04-18T07:18:56,285 On the other hand, currently there is no concept of package data 2024-04-18T07:18:56,286 directory, all directories are treated like packages. 2024-04-18T07:18:56,286 ******************************************************************************** 2024-04-18T07:18:56,287 !! 2024-04-18T07:18:56,288 check.warn(importable) 2024-04-18T07:18:56,288 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'funid.external.RAxML_Windows' is absent from the `packages` configuration. 2024-04-18T07:18:56,289 !! 2024-04-18T07:18:56,290 ******************************************************************************** 2024-04-18T07:18:56,290 ############################ 2024-04-18T07:18:56,291 # Package would be ignored # 2024-04-18T07:18:56,291 ############################ 2024-04-18T07:18:56,292 Python recognizes 'funid.external.RAxML_Windows' as an importable package[^1], 2024-04-18T07:18:56,292 but it is absent from setuptools' `packages` configuration. 2024-04-18T07:18:56,294 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-18T07:18:56,294 package, please make sure that 'funid.external.RAxML_Windows' is explicitly added 2024-04-18T07:18:56,295 to the `packages` configuration field. 2024-04-18T07:18:56,296 Alternatively, you can also rely on setuptools' discovery methods 2024-04-18T07:18:56,297 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-18T07:18:56,298 instead of `find_packages(...)`/`find:`). 2024-04-18T07:18:56,299 You can read more about "package discovery" on setuptools documentation page: 2024-04-18T07:18:56,300 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-18T07:18:56,301 If you don't want 'funid.external.RAxML_Windows' to be distributed and are 2024-04-18T07:18:56,301 already explicitly excluding 'funid.external.RAxML_Windows' via 2024-04-18T07:18:56,302 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-18T07:18:56,302 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-18T07:18:56,303 combination with a more fine grained `package-data` configuration. 2024-04-18T07:18:56,304 You can read more about "package data files" on setuptools documentation page: 2024-04-18T07:18:56,305 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-18T07:18:56,307 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-18T07:18:56,307 even if it does not contain any `.py` files. 2024-04-18T07:18:56,308 On the other hand, currently there is no concept of package data 2024-04-18T07:18:56,309 directory, all directories are treated like packages. 2024-04-18T07:18:56,309 ******************************************************************************** 2024-04-18T07:18:56,311 !! 2024-04-18T07:18:56,311 check.warn(importable) 2024-04-18T07:18:56,311 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'funid.external.mmseqs_Windows' is absent from the `packages` configuration. 2024-04-18T07:18:56,312 !! 2024-04-18T07:18:56,313 ******************************************************************************** 2024-04-18T07:18:56,313 ############################ 2024-04-18T07:18:56,314 # Package would be ignored # 2024-04-18T07:18:56,314 ############################ 2024-04-18T07:18:56,315 Python recognizes 'funid.external.mmseqs_Windows' as an importable package[^1], 2024-04-18T07:18:56,315 but it is absent from setuptools' `packages` configuration. 2024-04-18T07:18:56,316 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-18T07:18:56,316 package, please make sure that 'funid.external.mmseqs_Windows' is explicitly added 2024-04-18T07:18:56,317 to the `packages` configuration field. 2024-04-18T07:18:56,319 Alternatively, you can also rely on setuptools' discovery methods 2024-04-18T07:18:56,319 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-18T07:18:56,320 instead of `find_packages(...)`/`find:`). 2024-04-18T07:18:56,321 You can read more about "package discovery" on setuptools documentation page: 2024-04-18T07:18:56,322 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-18T07:18:56,323 If you don't want 'funid.external.mmseqs_Windows' to be distributed and are 2024-04-18T07:18:56,323 already explicitly excluding 'funid.external.mmseqs_Windows' via 2024-04-18T07:18:56,324 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-18T07:18:56,324 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-18T07:18:56,325 combination with a more fine grained `package-data` configuration. 2024-04-18T07:18:56,326 You can read more about "package data files" on setuptools documentation page: 2024-04-18T07:18:56,327 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-18T07:18:56,329 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-18T07:18:56,329 even if it does not contain any `.py` files. 2024-04-18T07:18:56,330 On the other hand, currently there is no concept of package data 2024-04-18T07:18:56,330 directory, all directories are treated like packages. 2024-04-18T07:18:56,331 ******************************************************************************** 2024-04-18T07:18:56,356 !! 2024-04-18T07:18:56,362 check.warn(importable) 2024-04-18T07:18:56,385 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'funid.external.mmseqs_Windows.bin' is absent from the `packages` configuration. 2024-04-18T07:18:56,410 !! 2024-04-18T07:18:56,524 ******************************************************************************** 2024-04-18T07:18:56,599 ############################ 2024-04-18T07:18:56,615 # Package would be ignored # 2024-04-18T07:18:56,615 ############################ 2024-04-18T07:18:56,616 Python recognizes 'funid.external.mmseqs_Windows.bin' as an importable package[^1], 2024-04-18T07:18:56,617 but it is absent from setuptools' `packages` configuration. 2024-04-18T07:18:56,618 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-18T07:18:56,618 package, please make sure that 'funid.external.mmseqs_Windows.bin' is explicitly added 2024-04-18T07:18:56,619 to the `packages` configuration field. 2024-04-18T07:18:56,620 Alternatively, you can also rely on setuptools' discovery methods 2024-04-18T07:18:56,621 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-18T07:18:56,621 instead of `find_packages(...)`/`find:`). 2024-04-18T07:18:56,622 You can read more about "package discovery" on setuptools documentation page: 2024-04-18T07:18:56,623 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-18T07:18:56,623 If you don't want 'funid.external.mmseqs_Windows.bin' to be distributed and are 2024-04-18T07:18:56,624 already explicitly excluding 'funid.external.mmseqs_Windows.bin' via 2024-04-18T07:18:56,624 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-18T07:18:56,624 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-18T07:18:56,625 combination with a more fine grained `package-data` configuration. 2024-04-18T07:18:56,626 You can read more about "package data files" on setuptools documentation page: 2024-04-18T07:18:56,627 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-18T07:18:56,628 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-18T07:18:56,629 even if it does not contain any `.py` files. 2024-04-18T07:18:56,629 On the other hand, currently there is no concept of package data 2024-04-18T07:18:56,630 directory, all directories are treated like packages. 2024-04-18T07:18:56,630 ******************************************************************************** 2024-04-18T07:18:56,631 !! 2024-04-18T07:18:56,632 check.warn(importable) 2024-04-18T07:18:56,632 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'funid.external.mmseqs_Windows.examples' is absent from the `packages` configuration. 2024-04-18T07:18:56,633 !! 2024-04-18T07:18:56,634 ******************************************************************************** 2024-04-18T07:18:56,635 ############################ 2024-04-18T07:18:56,635 # Package would be ignored # 2024-04-18T07:18:56,636 ############################ 2024-04-18T07:18:56,636 Python recognizes 'funid.external.mmseqs_Windows.examples' as an importable package[^1], 2024-04-18T07:18:56,637 but it is absent from setuptools' `packages` configuration. 2024-04-18T07:18:56,638 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-18T07:18:56,639 package, please make sure that 'funid.external.mmseqs_Windows.examples' is explicitly added 2024-04-18T07:18:56,640 to the `packages` configuration field. 2024-04-18T07:18:56,641 Alternatively, you can also rely on setuptools' discovery methods 2024-04-18T07:18:56,641 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-18T07:18:56,642 instead of `find_packages(...)`/`find:`). 2024-04-18T07:18:56,643 You can read more about "package discovery" on setuptools documentation page: 2024-04-18T07:18:56,644 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-18T07:18:56,645 If you don't want 'funid.external.mmseqs_Windows.examples' to be distributed and are 2024-04-18T07:18:56,646 already explicitly excluding 'funid.external.mmseqs_Windows.examples' via 2024-04-18T07:18:56,646 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-18T07:18:56,647 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-18T07:18:56,648 combination with a more fine grained `package-data` configuration. 2024-04-18T07:18:56,649 You can read more about "package data files" on setuptools documentation page: 2024-04-18T07:18:56,651 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-18T07:18:56,652 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-18T07:18:56,653 even if it does not contain any `.py` files. 2024-04-18T07:18:56,653 On the other hand, currently there is no concept of package data 2024-04-18T07:18:56,653 directory, all directories are treated like packages. 2024-04-18T07:18:56,654 ******************************************************************************** 2024-04-18T07:18:56,655 !! 2024-04-18T07:18:56,655 check.warn(importable) 2024-04-18T07:18:56,656 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'funid.external.mmseqs_Windows.matrices' is absent from the `packages` configuration. 2024-04-18T07:18:56,656 !! 2024-04-18T07:18:56,657 ******************************************************************************** 2024-04-18T07:18:56,657 ############################ 2024-04-18T07:18:56,658 # Package would be ignored # 2024-04-18T07:18:56,659 ############################ 2024-04-18T07:18:56,659 Python recognizes 'funid.external.mmseqs_Windows.matrices' as an importable package[^1], 2024-04-18T07:18:56,660 but it is absent from setuptools' `packages` configuration. 2024-04-18T07:18:56,660 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-18T07:18:56,661 package, please make sure that 'funid.external.mmseqs_Windows.matrices' is explicitly added 2024-04-18T07:18:56,662 to the `packages` configuration field. 2024-04-18T07:18:56,663 Alternatively, you can also rely on setuptools' discovery methods 2024-04-18T07:18:56,664 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-18T07:18:56,664 instead of `find_packages(...)`/`find:`). 2024-04-18T07:18:56,666 You can read more about "package discovery" on setuptools documentation page: 2024-04-18T07:18:56,667 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-18T07:18:56,668 If you don't want 'funid.external.mmseqs_Windows.matrices' to be distributed and are 2024-04-18T07:18:56,669 already explicitly excluding 'funid.external.mmseqs_Windows.matrices' via 2024-04-18T07:18:56,669 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-18T07:18:56,670 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-18T07:18:56,671 combination with a more fine grained `package-data` configuration. 2024-04-18T07:18:56,672 You can read more about "package data files" on setuptools documentation page: 2024-04-18T07:18:56,673 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-18T07:18:56,675 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-18T07:18:56,676 even if it does not contain any `.py` files. 2024-04-18T07:18:56,677 On the other hand, currently there is no concept of package data 2024-04-18T07:18:56,678 directory, all directories are treated like packages. 2024-04-18T07:18:56,678 ******************************************************************************** 2024-04-18T07:18:56,680 !! 2024-04-18T07:18:56,680 check.warn(importable) 2024-04-18T07:18:56,681 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'funid.external.mmseqs_Windows.util' is absent from the `packages` configuration. 2024-04-18T07:18:56,682 !! 2024-04-18T07:18:56,683 ******************************************************************************** 2024-04-18T07:18:56,684 ############################ 2024-04-18T07:18:56,684 # Package would be ignored # 2024-04-18T07:18:56,685 ############################ 2024-04-18T07:18:56,686 Python recognizes 'funid.external.mmseqs_Windows.util' as an importable package[^1], 2024-04-18T07:18:56,686 but it is absent from setuptools' `packages` configuration. 2024-04-18T07:18:56,687 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-18T07:18:56,687 package, please make sure that 'funid.external.mmseqs_Windows.util' is explicitly added 2024-04-18T07:18:56,688 to the `packages` configuration field. 2024-04-18T07:18:56,689 Alternatively, you can also rely on setuptools' discovery methods 2024-04-18T07:18:56,689 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-18T07:18:56,690 instead of `find_packages(...)`/`find:`). 2024-04-18T07:18:56,691 You can read more about "package discovery" on setuptools documentation page: 2024-04-18T07:18:56,692 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-18T07:18:56,693 If you don't want 'funid.external.mmseqs_Windows.util' to be distributed and are 2024-04-18T07:18:56,693 already explicitly excluding 'funid.external.mmseqs_Windows.util' via 2024-04-18T07:18:56,694 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-18T07:18:56,694 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-18T07:18:56,694 combination with a more fine grained `package-data` configuration. 2024-04-18T07:18:56,695 You can read more about "package data files" on setuptools documentation page: 2024-04-18T07:18:56,696 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-18T07:18:56,698 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-18T07:18:56,699 even if it does not contain any `.py` files. 2024-04-18T07:18:56,699 On the other hand, currently there is no concept of package data 2024-04-18T07:18:56,700 directory, all directories are treated like packages. 2024-04-18T07:18:56,701 ******************************************************************************** 2024-04-18T07:18:56,702 !! 2024-04-18T07:18:56,703 check.warn(importable) 2024-04-18T07:18:56,703 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'funid.test_dataset.penicillium' is absent from the `packages` configuration. 2024-04-18T07:18:56,704 !! 2024-04-18T07:18:56,705 ******************************************************************************** 2024-04-18T07:18:56,706 ############################ 2024-04-18T07:18:56,706 # Package would be ignored # 2024-04-18T07:18:56,707 ############################ 2024-04-18T07:18:56,707 Python recognizes 'funid.test_dataset.penicillium' as an importable package[^1], 2024-04-18T07:18:56,708 but it is absent from setuptools' `packages` configuration. 2024-04-18T07:18:56,709 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-18T07:18:56,709 package, please make sure that 'funid.test_dataset.penicillium' is explicitly added 2024-04-18T07:18:56,711 to the `packages` configuration field. 2024-04-18T07:18:56,800 Alternatively, you can also rely on setuptools' discovery methods 2024-04-18T07:18:56,858 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-18T07:18:56,875 instead of `find_packages(...)`/`find:`). 2024-04-18T07:18:56,878 You can read more about "package discovery" on setuptools documentation page: 2024-04-18T07:18:56,879 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-18T07:18:56,880 If you don't want 'funid.test_dataset.penicillium' to be distributed and are 2024-04-18T07:18:56,881 already explicitly excluding 'funid.test_dataset.penicillium' via 2024-04-18T07:18:56,882 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-18T07:18:56,882 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-18T07:18:56,883 combination with a more fine grained `package-data` configuration. 2024-04-18T07:18:56,883 You can read more about "package data files" on setuptools documentation page: 2024-04-18T07:18:56,884 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-18T07:18:56,886 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-18T07:18:56,886 even if it does not contain any `.py` files. 2024-04-18T07:18:56,887 On the other hand, currently there is no concept of package data 2024-04-18T07:18:56,887 directory, all directories are treated like packages. 2024-04-18T07:18:56,888 ******************************************************************************** 2024-04-18T07:18:56,889 !! 2024-04-18T07:18:56,890 check.warn(importable) 2024-04-18T07:18:56,891 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'funid.test_dataset.penicillium.DB' is absent from the `packages` configuration. 2024-04-18T07:18:56,891 !! 2024-04-18T07:18:56,892 ******************************************************************************** 2024-04-18T07:18:56,893 ############################ 2024-04-18T07:18:56,894 # Package would be ignored # 2024-04-18T07:18:56,895 ############################ 2024-04-18T07:18:56,896 Python recognizes 'funid.test_dataset.penicillium.DB' as an importable package[^1], 2024-04-18T07:18:56,897 but it is absent from setuptools' `packages` configuration. 2024-04-18T07:18:56,908 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-18T07:18:56,909 package, please make sure that 'funid.test_dataset.penicillium.DB' is explicitly added 2024-04-18T07:18:56,910 to the `packages` configuration field. 2024-04-18T07:18:56,911 Alternatively, you can also rely on setuptools' discovery methods 2024-04-18T07:18:56,912 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-18T07:18:56,912 instead of `find_packages(...)`/`find:`). 2024-04-18T07:18:56,914 You can read more about "package discovery" on setuptools documentation page: 2024-04-18T07:18:56,915 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-18T07:18:56,916 If you don't want 'funid.test_dataset.penicillium.DB' to be distributed and are 2024-04-18T07:18:56,917 already explicitly excluding 'funid.test_dataset.penicillium.DB' via 2024-04-18T07:18:56,917 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-18T07:18:56,918 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-18T07:18:56,919 combination with a more fine grained `package-data` configuration. 2024-04-18T07:18:56,920 You can read more about "package data files" on setuptools documentation page: 2024-04-18T07:18:56,921 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-18T07:18:56,923 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-18T07:18:56,923 even if it does not contain any `.py` files. 2024-04-18T07:18:56,924 On the other hand, currently there is no concept of package data 2024-04-18T07:18:56,925 directory, all directories are treated like packages. 2024-04-18T07:18:56,925 ******************************************************************************** 2024-04-18T07:18:56,927 !! 2024-04-18T07:18:56,927 check.warn(importable) 2024-04-18T07:18:56,928 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'funid.test_dataset.penicillium.Query' is absent from the `packages` configuration. 2024-04-18T07:18:56,928 !! 2024-04-18T07:18:56,929 ******************************************************************************** 2024-04-18T07:18:56,930 ############################ 2024-04-18T07:18:56,930 # Package would be ignored # 2024-04-18T07:18:56,930 ############################ 2024-04-18T07:18:56,931 Python recognizes 'funid.test_dataset.penicillium.Query' as an importable package[^1], 2024-04-18T07:18:56,931 but it is absent from setuptools' `packages` configuration. 2024-04-18T07:18:56,932 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-18T07:18:56,932 package, please make sure that 'funid.test_dataset.penicillium.Query' is explicitly added 2024-04-18T07:18:56,933 to the `packages` configuration field. 2024-04-18T07:18:56,934 Alternatively, you can also rely on setuptools' discovery methods 2024-04-18T07:18:56,934 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-18T07:18:56,935 instead of `find_packages(...)`/`find:`). 2024-04-18T07:18:56,935 You can read more about "package discovery" on setuptools documentation page: 2024-04-18T07:18:56,936 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-18T07:18:56,937 If you don't want 'funid.test_dataset.penicillium.Query' to be distributed and are 2024-04-18T07:18:56,938 already explicitly excluding 'funid.test_dataset.penicillium.Query' via 2024-04-18T07:18:56,938 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-18T07:18:56,939 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-18T07:18:56,940 combination with a more fine grained `package-data` configuration. 2024-04-18T07:18:56,941 You can read more about "package data files" on setuptools documentation page: 2024-04-18T07:18:56,942 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-18T07:18:56,944 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-18T07:18:56,945 even if it does not contain any `.py` files. 2024-04-18T07:18:56,945 On the other hand, currently there is no concept of package data 2024-04-18T07:18:56,946 directory, all directories are treated like packages. 2024-04-18T07:18:56,947 ******************************************************************************** 2024-04-18T07:18:56,948 !! 2024-04-18T07:18:56,948 check.warn(importable) 2024-04-18T07:18:56,949 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'funid.test_dataset.terrei' is absent from the `packages` configuration. 2024-04-18T07:18:56,949 !! 2024-04-18T07:18:56,950 ******************************************************************************** 2024-04-18T07:18:56,951 ############################ 2024-04-18T07:18:56,951 # Package would be ignored # 2024-04-18T07:18:56,952 ############################ 2024-04-18T07:18:56,953 Python recognizes 'funid.test_dataset.terrei' as an importable package[^1], 2024-04-18T07:18:56,953 but it is absent from setuptools' `packages` configuration. 2024-04-18T07:18:56,974 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-18T07:18:56,991 package, please make sure that 'funid.test_dataset.terrei' is explicitly added 2024-04-18T07:18:57,011 to the `packages` configuration field. 2024-04-18T07:18:57,054 Alternatively, you can also rely on setuptools' discovery methods 2024-04-18T07:18:57,072 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-18T07:18:57,093 instead of `find_packages(...)`/`find:`). 2024-04-18T07:18:57,094 You can read more about "package discovery" on setuptools documentation page: 2024-04-18T07:18:57,094 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-18T07:18:57,095 If you don't want 'funid.test_dataset.terrei' to be distributed and are 2024-04-18T07:18:57,095 already explicitly excluding 'funid.test_dataset.terrei' via 2024-04-18T07:18:57,096 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-18T07:18:57,096 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-18T07:18:57,097 combination with a more fine grained `package-data` configuration. 2024-04-18T07:18:57,097 You can read more about "package data files" on setuptools documentation page: 2024-04-18T07:18:57,099 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-18T07:18:57,100 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-18T07:18:57,102 even if it does not contain any `.py` files. 2024-04-18T07:18:57,103 On the other hand, currently there is no concept of package data 2024-04-18T07:18:57,103 directory, all directories are treated like packages. 2024-04-18T07:18:57,104 ******************************************************************************** 2024-04-18T07:18:57,105 !! 2024-04-18T07:18:57,106 check.warn(importable) 2024-04-18T07:18:57,106 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'funid.test_dataset.terrei.DB' is absent from the `packages` configuration. 2024-04-18T07:18:57,107 !! 2024-04-18T07:18:57,108 ******************************************************************************** 2024-04-18T07:18:57,109 ############################ 2024-04-18T07:18:57,109 # Package would be ignored # 2024-04-18T07:18:57,110 ############################ 2024-04-18T07:18:57,110 Python recognizes 'funid.test_dataset.terrei.DB' as an importable package[^1], 2024-04-18T07:18:57,111 but it is absent from setuptools' `packages` configuration. 2024-04-18T07:18:57,112 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-18T07:18:57,117 package, please make sure that 'funid.test_dataset.terrei.DB' is explicitly added 2024-04-18T07:18:57,118 to the `packages` configuration field. 2024-04-18T07:18:57,120 Alternatively, you can also rely on setuptools' discovery methods 2024-04-18T07:18:57,120 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-18T07:18:57,121 instead of `find_packages(...)`/`find:`). 2024-04-18T07:18:57,122 You can read more about "package discovery" on setuptools documentation page: 2024-04-18T07:18:57,126 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-18T07:18:57,127 If you don't want 'funid.test_dataset.terrei.DB' to be distributed and are 2024-04-18T07:18:57,128 already explicitly excluding 'funid.test_dataset.terrei.DB' via 2024-04-18T07:18:57,128 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-18T07:18:57,129 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-18T07:18:57,129 combination with a more fine grained `package-data` configuration. 2024-04-18T07:18:57,130 You can read more about "package data files" on setuptools documentation page: 2024-04-18T07:18:57,131 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-18T07:18:57,133 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-18T07:18:57,134 even if it does not contain any `.py` files. 2024-04-18T07:18:57,134 On the other hand, currently there is no concept of package data 2024-04-18T07:18:57,135 directory, all directories are treated like packages. 2024-04-18T07:18:57,135 ******************************************************************************** 2024-04-18T07:18:57,137 !! 2024-04-18T07:18:57,137 check.warn(importable) 2024-04-18T07:18:57,138 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'funid.test_dataset.terrei.Query' is absent from the `packages` configuration. 2024-04-18T07:18:57,138 !! 2024-04-18T07:18:57,139 ******************************************************************************** 2024-04-18T07:18:57,139 ############################ 2024-04-18T07:18:57,140 # Package would be ignored # 2024-04-18T07:18:57,141 ############################ 2024-04-18T07:18:57,141 Python recognizes 'funid.test_dataset.terrei.Query' as an importable package[^1], 2024-04-18T07:18:57,142 but it is absent from setuptools' `packages` configuration. 2024-04-18T07:18:57,143 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-18T07:18:57,143 package, please make sure that 'funid.test_dataset.terrei.Query' is explicitly added 2024-04-18T07:18:57,144 to the `packages` configuration field. 2024-04-18T07:18:57,145 Alternatively, you can also rely on setuptools' discovery methods 2024-04-18T07:18:57,145 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-18T07:18:57,146 instead of `find_packages(...)`/`find:`). 2024-04-18T07:18:57,147 You can read more about "package discovery" on setuptools documentation page: 2024-04-18T07:18:57,148 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-18T07:18:57,149 If you don't want 'funid.test_dataset.terrei.Query' to be distributed and are 2024-04-18T07:18:57,150 already explicitly excluding 'funid.test_dataset.terrei.Query' via 2024-04-18T07:18:57,150 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-18T07:18:57,151 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-18T07:18:57,151 combination with a more fine grained `package-data` configuration. 2024-04-18T07:18:57,153 You can read more about "package data files" on setuptools documentation page: 2024-04-18T07:18:57,154 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-18T07:18:57,155 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-18T07:18:57,156 even if it does not contain any `.py` files. 2024-04-18T07:18:57,156 On the other hand, currently there is no concept of package data 2024-04-18T07:18:57,157 directory, all directories are treated like packages. 2024-04-18T07:18:57,157 ******************************************************************************** 2024-04-18T07:18:57,158 !! 2024-04-18T07:18:57,159 check.warn(importable) 2024-04-18T07:18:57,160 creating build/lib/funid/external 2024-04-18T07:18:57,160 copying funid/external/MAFFT_LICENSE -> build/lib/funid/external 2024-04-18T07:18:57,161 copying funid/external/MAFFT_Windows.zip -> build/lib/funid/external 2024-04-18T07:18:57,161 copying funid/external/__init__.py -> build/lib/funid/external 2024-04-18T07:18:57,162 creating build/lib/funid/external/BLAST_Windows 2024-04-18T07:18:57,163 copying funid/external/BLAST_Windows/Uninstall-ncbi-blast-2.12.0+.exe -> build/lib/funid/external/BLAST_Windows 2024-04-18T07:18:57,163 creating build/lib/funid/external/BLAST_Windows/bin 2024-04-18T07:18:57,164 copying funid/external/BLAST_Windows/bin/blastn.exe -> build/lib/funid/external/BLAST_Windows/bin 2024-04-18T07:18:57,173 copying funid/external/BLAST_Windows/bin/cleanup-blastdb-volumes.py -> build/lib/funid/external/BLAST_Windows/bin 2024-04-18T07:18:57,182 copying funid/external/BLAST_Windows/bin/get_species_taxids.sh -> build/lib/funid/external/BLAST_Windows/bin 2024-04-18T07:18:57,183 copying funid/external/BLAST_Windows/bin/legacy_blast.pl -> build/lib/funid/external/BLAST_Windows/bin 2024-04-18T07:18:57,183 copying funid/external/BLAST_Windows/bin/makeblastdb.exe -> build/lib/funid/external/BLAST_Windows/bin 2024-04-18T07:18:57,184 copying funid/external/BLAST_Windows/bin/nghttp2.dll -> build/lib/funid/external/BLAST_Windows/bin 2024-04-18T07:18:57,184 copying funid/external/BLAST_Windows/bin/update_blastdb.pl -> build/lib/funid/external/BLAST_Windows/bin 2024-04-18T07:18:57,185 creating build/lib/funid/external/BLAST_Windows/doc 2024-04-18T07:18:57,185 copying funid/external/BLAST_Windows/doc/README.txt -> build/lib/funid/external/BLAST_Windows/doc 2024-04-18T07:18:57,186 creating build/lib/funid/external/FastTree_Windows 2024-04-18T07:18:57,186 copying funid/external/FastTree_Windows/FastTree.exe -> build/lib/funid/external/FastTree_Windows 2024-04-18T07:18:57,187 creating build/lib/funid/external/Gblocks_Windows_0.91b 2024-04-18T07:18:57,187 creating build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2024-04-18T07:18:57,188 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Gblocks.exe -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2024-04-18T07:18:57,188 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/nad3.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2024-04-18T07:18:57,189 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/paths -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2024-04-18T07:18:57,189 creating build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation 2024-04-18T07:18:57,190 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation/Gblocks_documentation.html -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation 2024-04-18T07:18:57,190 creating build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2024-04-18T07:18:57,191 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cox2.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2024-04-18T07:18:57,192 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cytb.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2024-04-18T07:18:57,192 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad3.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2024-04-18T07:18:57,193 copying funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad5.pir -> build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2024-04-18T07:18:57,194 creating build/lib/funid/external/RAxML_Windows 2024-04-18T07:18:57,194 copying funid/external/RAxML_Windows/GPL-3.0.txt -> build/lib/funid/external/RAxML_Windows 2024-04-18T07:18:57,200 copying funid/external/RAxML_Windows/README -> build/lib/funid/external/RAxML_Windows 2024-04-18T07:18:57,201 copying funid/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX2.exe -> build/lib/funid/external/RAxML_Windows 2024-04-18T07:18:57,202 creating build/lib/funid/external/iqtree-2.2.2.7-Windows 2024-04-18T07:18:57,204 copying funid/external/iqtree-2.2.2.7-Windows/example.cf -> build/lib/funid/external/iqtree-2.2.2.7-Windows 2024-04-18T07:18:57,222 copying funid/external/iqtree-2.2.2.7-Windows/example.nex -> build/lib/funid/external/iqtree-2.2.2.7-Windows 2024-04-18T07:18:57,224 copying funid/external/iqtree-2.2.2.7-Windows/example.phy -> build/lib/funid/external/iqtree-2.2.2.7-Windows 2024-04-18T07:18:57,227 copying funid/external/iqtree-2.2.2.7-Windows/models.nex -> build/lib/funid/external/iqtree-2.2.2.7-Windows 2024-04-18T07:18:57,232 creating build/lib/funid/external/iqtree-2.2.2.7-Windows/bin 2024-04-18T07:18:57,233 copying funid/external/iqtree-2.2.2.7-Windows/bin/iqtree2.exe -> build/lib/funid/external/iqtree-2.2.2.7-Windows/bin 2024-04-18T07:18:57,400 copying funid/external/iqtree-2.2.2.7-Windows/bin/libiomp5md.dll -> build/lib/funid/external/iqtree-2.2.2.7-Windows/bin 2024-04-18T07:18:57,422 creating build/lib/funid/external/mmseqs_Windows 2024-04-18T07:18:57,423 copying funid/external/mmseqs_Windows/LICENSE.md -> build/lib/funid/external/mmseqs_Windows 2024-04-18T07:18:57,426 copying funid/external/mmseqs_Windows/README.md -> build/lib/funid/external/mmseqs_Windows 2024-04-18T07:18:57,429 copying funid/external/mmseqs_Windows/mmseqs.bat -> build/lib/funid/external/mmseqs_Windows 2024-04-18T07:18:57,431 creating build/lib/funid/external/mmseqs_Windows/bin 2024-04-18T07:18:57,432 copying funid/external/mmseqs_Windows/bin/busybox.exe -> build/lib/funid/external/mmseqs_Windows/bin 2024-04-18T07:18:57,445 copying funid/external/mmseqs_Windows/bin/cygbz2-1.dll -> build/lib/funid/external/mmseqs_Windows/bin 2024-04-18T07:18:57,449 copying funid/external/mmseqs_Windows/bin/cyggcc_s-seh-1.dll -> build/lib/funid/external/mmseqs_Windows/bin 2024-04-18T07:18:57,453 copying funid/external/mmseqs_Windows/bin/cyggomp-1.dll -> build/lib/funid/external/mmseqs_Windows/bin 2024-04-18T07:18:57,460 copying funid/external/mmseqs_Windows/bin/cygstdc++-6.dll -> build/lib/funid/external/mmseqs_Windows/bin 2024-04-18T07:18:57,530 copying funid/external/mmseqs_Windows/bin/cygwin1.dll -> build/lib/funid/external/mmseqs_Windows/bin 2024-04-18T07:18:57,597 copying funid/external/mmseqs_Windows/bin/cygz.dll -> build/lib/funid/external/mmseqs_Windows/bin 2024-04-18T07:18:57,601 copying funid/external/mmseqs_Windows/bin/mmseqs.exe -> build/lib/funid/external/mmseqs_Windows/bin 2024-04-18T07:18:57,799 creating build/lib/funid/external/mmseqs_Windows/examples 2024-04-18T07:18:57,800 copying funid/external/mmseqs_Windows/examples/QUERY.fasta -> build/lib/funid/external/mmseqs_Windows/examples 2024-04-18T07:18:57,807 creating build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,808 copying funid/external/mmseqs_Windows/matrices/PAM10.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,811 copying funid/external/mmseqs_Windows/matrices/PAM100.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,813 copying funid/external/mmseqs_Windows/matrices/PAM110.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,815 copying funid/external/mmseqs_Windows/matrices/PAM120.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,817 copying funid/external/mmseqs_Windows/matrices/PAM130.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,820 copying funid/external/mmseqs_Windows/matrices/PAM140.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,822 copying funid/external/mmseqs_Windows/matrices/PAM150.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,824 copying funid/external/mmseqs_Windows/matrices/PAM160.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,826 copying funid/external/mmseqs_Windows/matrices/PAM170.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,829 copying funid/external/mmseqs_Windows/matrices/PAM180.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,831 copying funid/external/mmseqs_Windows/matrices/PAM190.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,833 copying funid/external/mmseqs_Windows/matrices/PAM20.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,835 copying funid/external/mmseqs_Windows/matrices/PAM30.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,838 copying funid/external/mmseqs_Windows/matrices/PAM40.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,840 copying funid/external/mmseqs_Windows/matrices/PAM50.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,842 copying funid/external/mmseqs_Windows/matrices/PAM60.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,844 copying funid/external/mmseqs_Windows/matrices/PAM70.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,847 copying funid/external/mmseqs_Windows/matrices/PAM80.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,849 copying funid/external/mmseqs_Windows/matrices/PAM90.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,851 copying funid/external/mmseqs_Windows/matrices/VTML10.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,853 copying funid/external/mmseqs_Windows/matrices/VTML120.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,856 copying funid/external/mmseqs_Windows/matrices/VTML160.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,858 copying funid/external/mmseqs_Windows/matrices/VTML20.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,861 copying funid/external/mmseqs_Windows/matrices/VTML40.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,863 copying funid/external/mmseqs_Windows/matrices/VTML80.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,865 copying funid/external/mmseqs_Windows/matrices/blosum100.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,867 copying funid/external/mmseqs_Windows/matrices/blosum30.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,869 copying funid/external/mmseqs_Windows/matrices/blosum35.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,872 copying funid/external/mmseqs_Windows/matrices/blosum40.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,874 copying funid/external/mmseqs_Windows/matrices/blosum45.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,876 copying funid/external/mmseqs_Windows/matrices/blosum50.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,878 copying funid/external/mmseqs_Windows/matrices/blosum55.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,881 copying funid/external/mmseqs_Windows/matrices/blosum60.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,883 copying funid/external/mmseqs_Windows/matrices/blosum62.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,885 copying funid/external/mmseqs_Windows/matrices/blosum65.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,888 copying funid/external/mmseqs_Windows/matrices/blosum70.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,890 copying funid/external/mmseqs_Windows/matrices/blosum75.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,893 copying funid/external/mmseqs_Windows/matrices/blosum80.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,895 copying funid/external/mmseqs_Windows/matrices/blosum85.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,897 copying funid/external/mmseqs_Windows/matrices/blosum90.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,900 copying funid/external/mmseqs_Windows/matrices/blosum95.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,902 copying funid/external/mmseqs_Windows/matrices/nucleotide.out -> build/lib/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:57,904 creating build/lib/funid/external/mmseqs_Windows/util 2024-04-18T07:18:57,905 copying funid/external/mmseqs_Windows/util/bash-completion.sh -> build/lib/funid/external/mmseqs_Windows/util 2024-04-18T07:18:57,907 creating build/lib/funid/external/trimal.v1.4 2024-04-18T07:18:57,908 creating build/lib/funid/external/trimal.v1.4/trimAl 2024-04-18T07:18:57,909 copying funid/external/trimal.v1.4/trimAl/AUTHORS -> build/lib/funid/external/trimal.v1.4/trimAl 2024-04-18T07:18:57,911 copying funid/external/trimal.v1.4/trimAl/CHANGELOG -> build/lib/funid/external/trimal.v1.4/trimAl 2024-04-18T07:18:57,914 copying funid/external/trimal.v1.4/trimAl/LICENSE -> build/lib/funid/external/trimal.v1.4/trimAl 2024-04-18T07:18:57,917 copying funid/external/trimal.v1.4/trimAl/README -> build/lib/funid/external/trimal.v1.4/trimAl 2024-04-18T07:18:57,920 creating build/lib/funid/external/trimal.v1.4/trimAl/bin 2024-04-18T07:18:57,921 copying funid/external/trimal.v1.4/trimAl/bin/libgcc_s_dw2-1.dll -> build/lib/funid/external/trimal.v1.4/trimAl/bin 2024-04-18T07:18:57,939 copying funid/external/trimal.v1.4/trimAl/bin/libstdc++-6.dll -> build/lib/funid/external/trimal.v1.4/trimAl/bin 2024-04-18T07:18:57,965 copying funid/external/trimal.v1.4/trimAl/bin/trimal.exe -> build/lib/funid/external/trimal.v1.4/trimAl/bin 2024-04-18T07:18:57,973 creating build/lib/funid/external/trimal.v1.4/trimAl/scripts 2024-04-18T07:18:57,974 copying funid/external/trimal.v1.4/trimAl/scripts/check_codon_alignments.py -> build/lib/funid/external/trimal.v1.4/trimAl/scripts 2024-04-18T07:18:57,977 copying funid/external/trimal.v1.4/trimAl/scripts/compare_trimmed_msas.sh -> build/lib/funid/external/trimal.v1.4/trimAl/scripts 2024-04-18T07:18:57,979 copying funid/external/trimal.v1.4/trimAl/scripts/generateRandomAlignmentsUsingAsSeedRealAlignments.py -> build/lib/funid/external/trimal.v1.4/trimAl/scripts 2024-04-18T07:18:57,982 copying funid/external/trimal.v1.4/trimAl/scripts/generate_trimmed_msas.sh -> build/lib/funid/external/trimal.v1.4/trimAl/scripts 2024-04-18T07:18:57,986 copying funid/external/trimal.v1.4/trimAl/scripts/get_sequence_representative_from_alignment.py -> build/lib/funid/external/trimal.v1.4/trimAl/scripts 2024-04-18T07:18:57,988 copying funid/external/trimal.v1.4/trimAl/scripts/get_sequences_gaps_ratio.py -> build/lib/funid/external/trimal.v1.4/trimAl/scripts 2024-04-18T07:18:57,990 copying funid/external/trimal.v1.4/trimAl/scripts/remove_shorter_sequences.py -> build/lib/funid/external/trimal.v1.4/trimAl/scripts 2024-04-18T07:18:57,993 copying funid/external/trimal.v1.4/trimAl/scripts/selective_trimming_for_dNdS_analyses.based_neighbours.py -> build/lib/funid/external/trimal.v1.4/trimAl/scripts 2024-04-18T07:18:57,995 copying funid/external/trimal.v1.4/trimAl/scripts/set_manual_boundaries.py -> build/lib/funid/external/trimal.v1.4/trimAl/scripts 2024-04-18T07:18:57,998 creating build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:57,999 copying funid/external/trimal.v1.4/trimAl/source/alignment.cpp -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,004 copying funid/external/trimal.v1.4/trimAl/source/alignment.h -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,007 copying funid/external/trimal.v1.4/trimAl/source/alignment.o -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,012 copying funid/external/trimal.v1.4/trimAl/source/autAlignment.cpp -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,015 copying funid/external/trimal.v1.4/trimAl/source/autAlignment.o -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,018 copying funid/external/trimal.v1.4/trimAl/source/compareFiles.cpp -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,021 copying funid/external/trimal.v1.4/trimAl/source/compareFiles.h -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,023 copying funid/external/trimal.v1.4/trimAl/source/compareFiles.o -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,026 copying funid/external/trimal.v1.4/trimAl/source/defines.h -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,028 copying funid/external/trimal.v1.4/trimAl/source/main.cpp -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,033 copying funid/external/trimal.v1.4/trimAl/source/makefile -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,036 copying funid/external/trimal.v1.4/trimAl/source/makefile.MacOS -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,038 copying funid/external/trimal.v1.4/trimAl/source/readAl.cpp -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,040 copying funid/external/trimal.v1.4/trimAl/source/readal.exe -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,049 copying funid/external/trimal.v1.4/trimAl/source/rwAlignment.cpp -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,052 copying funid/external/trimal.v1.4/trimAl/source/rwAlignment.o -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,056 copying funid/external/trimal.v1.4/trimAl/source/sequencesMatrix.cpp -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,059 copying funid/external/trimal.v1.4/trimAl/source/sequencesMatrix.h -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,061 copying funid/external/trimal.v1.4/trimAl/source/sequencesMatrix.o -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,064 copying funid/external/trimal.v1.4/trimAl/source/similarityMatrix.cpp -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,067 copying funid/external/trimal.v1.4/trimAl/source/similarityMatrix.h -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,069 copying funid/external/trimal.v1.4/trimAl/source/similarityMatrix.o -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,072 copying funid/external/trimal.v1.4/trimAl/source/statAl.cpp -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,075 copying funid/external/trimal.v1.4/trimAl/source/statal.exe -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,083 copying funid/external/trimal.v1.4/trimAl/source/statisticsConservation.cpp -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,086 copying funid/external/trimal.v1.4/trimAl/source/statisticsConservation.h -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,088 copying funid/external/trimal.v1.4/trimAl/source/statisticsConservation.o -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,091 copying funid/external/trimal.v1.4/trimAl/source/statisticsFiles.cpp -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,093 copying funid/external/trimal.v1.4/trimAl/source/statisticsFiles.h -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,096 copying funid/external/trimal.v1.4/trimAl/source/statisticsGaps.cpp -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,098 copying funid/external/trimal.v1.4/trimAl/source/statisticsGaps.h -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,101 copying funid/external/trimal.v1.4/trimAl/source/statisticsGaps.o -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,104 copying funid/external/trimal.v1.4/trimAl/source/utils.cpp -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,107 copying funid/external/trimal.v1.4/trimAl/source/utils.h -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,110 copying funid/external/trimal.v1.4/trimAl/source/utils.o -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,113 copying funid/external/trimal.v1.4/trimAl/source/values.h -> build/lib/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,115 copying funid/data/Option_manager.xlsx -> build/lib/funid/data 2024-04-18T07:18:58,118 copying funid/data/genus_line.txt -> build/lib/funid/data 2024-04-18T07:18:58,121 creating build/lib/funid/test_dataset 2024-04-18T07:18:58,122 creating build/lib/funid/test_dataset/penicillium 2024-04-18T07:18:58,123 copying funid/test_dataset/penicillium/Options.config -> build/lib/funid/test_dataset/penicillium 2024-04-18T07:18:58,125 copying funid/test_dataset/penicillium/preset.yaml -> build/lib/funid/test_dataset/penicillium 2024-04-18T07:18:58,127 creating build/lib/funid/test_dataset/penicillium/DB 2024-04-18T07:18:58,128 copying funid/test_dataset/penicillium/DB/DB_Penicillium.xlsx -> build/lib/funid/test_dataset/penicillium/DB 2024-04-18T07:18:58,137 creating build/lib/funid/test_dataset/penicillium/Query 2024-04-18T07:18:58,138 copying funid/test_dataset/penicillium/Query/Query.xlsx -> build/lib/funid/test_dataset/penicillium/Query 2024-04-18T07:18:58,141 creating build/lib/funid/test_dataset/terrei 2024-04-18T07:18:58,142 copying funid/test_dataset/terrei/Options.config -> build/lib/funid/test_dataset/terrei 2024-04-18T07:18:58,144 copying funid/test_dataset/terrei/preset.yaml -> build/lib/funid/test_dataset/terrei 2024-04-18T07:18:58,146 creating build/lib/funid/test_dataset/terrei/DB 2024-04-18T07:18:58,147 copying funid/test_dataset/terrei/DB/FunID_Aspergillus_db.xlsx -> build/lib/funid/test_dataset/terrei/DB 2024-04-18T07:18:58,150 creating build/lib/funid/test_dataset/terrei/Query 2024-04-18T07:18:58,151 copying funid/test_dataset/terrei/Query/FunID_Aspergillus_query.xlsx -> build/lib/funid/test_dataset/terrei/Query 2024-04-18T07:18:58,154 creating build/lib/funid/preset 2024-04-18T07:18:58,155 copying funid/preset/accurate.yaml -> build/lib/funid/preset 2024-04-18T07:18:58,157 copying funid/preset/fast.yaml -> build/lib/funid/preset 2024-04-18T07:18:58,187 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-04-18T07:18:58,187 !! 2024-04-18T07:18:58,188 ******************************************************************************** 2024-04-18T07:18:58,189 Please avoid running ``setup.py`` directly. 2024-04-18T07:18:58,189 Instead, use pypa/build, pypa/installer or other 2024-04-18T07:18:58,190 standards-based tools. 2024-04-18T07:18:58,191 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-04-18T07:18:58,191 ******************************************************************************** 2024-04-18T07:18:58,192 !! 2024-04-18T07:18:58,193 self.initialize_options() 2024-04-18T07:18:58,213 installing to build/bdist.linux-armv7l/wheel 2024-04-18T07:18:58,214 running install 2024-04-18T07:18:58,249 running install_lib 2024-04-18T07:18:58,283 creating build/bdist.linux-armv7l 2024-04-18T07:18:58,283 creating build/bdist.linux-armv7l/wheel 2024-04-18T07:18:58,285 creating build/bdist.linux-armv7l/wheel/funid 2024-04-18T07:18:58,287 creating build/bdist.linux-armv7l/wheel/funid/data 2024-04-18T07:18:58,289 copying build/lib/funid/data/Option_manager.xlsx -> build/bdist.linux-armv7l/wheel/funid/data 2024-04-18T07:18:58,292 copying build/lib/funid/data/genus_line.txt -> build/bdist.linux-armv7l/wheel/funid/data 2024-04-18T07:18:58,296 copying build/lib/funid/data/__init__.py -> build/bdist.linux-armv7l/wheel/funid/data 2024-04-18T07:18:58,299 creating build/bdist.linux-armv7l/wheel/funid/src 2024-04-18T07:18:58,300 copying build/lib/funid/src/dataset.py -> build/bdist.linux-armv7l/wheel/funid/src 2024-04-18T07:18:58,303 copying build/lib/funid/src/validate_option.py -> build/bdist.linux-armv7l/wheel/funid/src 2024-04-18T07:18:58,308 copying build/lib/funid/src/cluster.py -> build/bdist.linux-armv7l/wheel/funid/src 2024-04-18T07:18:58,311 copying build/lib/funid/src/ncbi.py -> build/bdist.linux-armv7l/wheel/funid/src 2024-04-18T07:18:58,313 copying build/lib/funid/src/command.py -> build/bdist.linux-armv7l/wheel/funid/src 2024-04-18T07:18:58,316 copying build/lib/funid/src/save.py -> build/bdist.linux-armv7l/wheel/funid/src 2024-04-18T07:18:58,318 copying build/lib/funid/src/logger.py -> build/bdist.linux-armv7l/wheel/funid/src 2024-04-18T07:18:58,320 copying build/lib/funid/src/reporter.py -> build/bdist.linux-armv7l/wheel/funid/src 2024-04-18T07:18:58,323 copying build/lib/funid/src/trim.py -> build/bdist.linux-armv7l/wheel/funid/src 2024-04-18T07:18:58,325 copying build/lib/funid/src/tree_interpretation_pipe.py -> build/bdist.linux-armv7l/wheel/funid/src 2024-04-18T07:18:58,327 copying build/lib/funid/src/search.py -> build/bdist.linux-armv7l/wheel/funid/src 2024-04-18T07:18:58,330 copying build/lib/funid/src/concatenate.py -> build/bdist.linux-armv7l/wheel/funid/src 2024-04-18T07:18:58,332 copying build/lib/funid/src/align.py -> build/bdist.linux-armv7l/wheel/funid/src 2024-04-18T07:18:58,334 copying build/lib/funid/src/tree_interpretation.py -> build/bdist.linux-armv7l/wheel/funid/src 2024-04-18T07:18:58,338 copying build/lib/funid/src/initialize.py -> build/bdist.linux-armv7l/wheel/funid/src 2024-04-18T07:18:58,340 copying build/lib/funid/src/opt_generator.py -> build/bdist.linux-armv7l/wheel/funid/src 2024-04-18T07:18:58,342 copying build/lib/funid/src/ext.py -> build/bdist.linux-armv7l/wheel/funid/src 2024-04-18T07:18:58,345 copying build/lib/funid/src/tree.py -> build/bdist.linux-armv7l/wheel/funid/src 2024-04-18T07:18:58,347 copying build/lib/funid/src/tool.py -> build/bdist.linux-armv7l/wheel/funid/src 2024-04-18T07:18:58,349 copying build/lib/funid/src/__init__.py -> build/bdist.linux-armv7l/wheel/funid/src 2024-04-18T07:18:58,351 copying build/lib/funid/src/modeltest.py -> build/bdist.linux-armv7l/wheel/funid/src 2024-04-18T07:18:58,353 copying build/lib/funid/src/hasher.py -> build/bdist.linux-armv7l/wheel/funid/src 2024-04-18T07:18:58,355 copying build/lib/funid/src/patch.py -> build/bdist.linux-armv7l/wheel/funid/src 2024-04-18T07:18:58,357 copying build/lib/funid/src/manage_input.py -> build/bdist.linux-armv7l/wheel/funid/src 2024-04-18T07:18:58,360 copying build/lib/funid/src/validation.py -> build/bdist.linux-armv7l/wheel/funid/src 2024-04-18T07:18:58,362 copying build/lib/funid/src/logics.py -> build/bdist.linux-armv7l/wheel/funid/src 2024-04-18T07:18:58,363 copying build/lib/funid/FunID_GUI.py -> build/bdist.linux-armv7l/wheel/funid 2024-04-18T07:18:58,366 creating build/bdist.linux-armv7l/wheel/funid/test_dataset 2024-04-18T07:18:58,368 creating build/bdist.linux-armv7l/wheel/funid/test_dataset/terrei 2024-04-18T07:18:58,369 creating build/bdist.linux-armv7l/wheel/funid/test_dataset/terrei/DB 2024-04-18T07:18:58,370 copying build/lib/funid/test_dataset/terrei/DB/FunID_Aspergillus_db.xlsx -> build/bdist.linux-armv7l/wheel/funid/test_dataset/terrei/DB 2024-04-18T07:18:58,373 creating build/bdist.linux-armv7l/wheel/funid/test_dataset/terrei/Query 2024-04-18T07:18:58,374 copying build/lib/funid/test_dataset/terrei/Query/FunID_Aspergillus_query.xlsx -> build/bdist.linux-armv7l/wheel/funid/test_dataset/terrei/Query 2024-04-18T07:18:58,377 copying build/lib/funid/test_dataset/terrei/Options.config -> build/bdist.linux-armv7l/wheel/funid/test_dataset/terrei 2024-04-18T07:18:58,379 copying build/lib/funid/test_dataset/terrei/preset.yaml -> build/bdist.linux-armv7l/wheel/funid/test_dataset/terrei 2024-04-18T07:18:58,381 creating build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium 2024-04-18T07:18:58,382 creating build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium/DB 2024-04-18T07:18:58,383 copying build/lib/funid/test_dataset/penicillium/DB/DB_Penicillium.xlsx -> build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium/DB 2024-04-18T07:18:58,394 creating build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium/Query 2024-04-18T07:18:58,395 copying build/lib/funid/test_dataset/penicillium/Query/Query.xlsx -> build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium/Query 2024-04-18T07:18:58,399 copying build/lib/funid/test_dataset/penicillium/Options.config -> build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium 2024-04-18T07:18:58,401 copying build/lib/funid/test_dataset/penicillium/preset.yaml -> build/bdist.linux-armv7l/wheel/funid/test_dataset/penicillium 2024-04-18T07:18:58,403 creating build/bdist.linux-armv7l/wheel/funid/preset 2024-04-18T07:18:58,404 copying build/lib/funid/preset/accurate.yaml -> build/bdist.linux-armv7l/wheel/funid/preset 2024-04-18T07:18:58,406 copying build/lib/funid/preset/fast.yaml -> build/bdist.linux-armv7l/wheel/funid/preset 2024-04-18T07:18:58,408 creating build/bdist.linux-armv7l/wheel/funid/external 2024-04-18T07:18:58,409 creating build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2024-04-18T07:18:58,410 copying build/lib/funid/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX2.exe -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2024-04-18T07:18:58,439 copying build/lib/funid/external/RAxML_Windows/README -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2024-04-18T07:18:58,441 copying build/lib/funid/external/RAxML_Windows/GPL-3.0.txt -> build/bdist.linux-armv7l/wheel/funid/external/RAxML_Windows 2024-04-18T07:18:58,445 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows 2024-04-18T07:18:58,446 copying build/lib/funid/external/mmseqs_Windows/LICENSE.md -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows 2024-04-18T07:18:58,451 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,452 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM50.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,454 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM80.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,457 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM130.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,459 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML120.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,461 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum50.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,463 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum95.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,466 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM70.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,468 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM100.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,470 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum45.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,473 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML20.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,475 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum100.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,477 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum70.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,480 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML10.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,482 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML80.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,484 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML160.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,486 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM40.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,489 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum80.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,491 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum35.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,493 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum85.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,495 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum55.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,497 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM90.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,499 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM150.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,501 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM20.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,503 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM170.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,505 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM10.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,508 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum62.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,510 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM190.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,512 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM110.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,514 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum30.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,516 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum65.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,518 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM30.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,520 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM180.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,522 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM120.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,524 copying build/lib/funid/external/mmseqs_Windows/matrices/VTML40.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,527 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum60.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,529 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM60.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,531 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM160.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,533 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum90.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,535 copying build/lib/funid/external/mmseqs_Windows/matrices/PAM140.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,537 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum40.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,539 copying build/lib/funid/external/mmseqs_Windows/matrices/blosum75.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,542 copying build/lib/funid/external/mmseqs_Windows/matrices/nucleotide.out -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/matrices 2024-04-18T07:18:58,544 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/examples 2024-04-18T07:18:58,545 copying build/lib/funid/external/mmseqs_Windows/examples/QUERY.fasta -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/examples 2024-04-18T07:18:58,555 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/util 2024-04-18T07:18:58,556 copying build/lib/funid/external/mmseqs_Windows/util/bash-completion.sh -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/util 2024-04-18T07:18:58,559 copying build/lib/funid/external/mmseqs_Windows/README.md -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows 2024-04-18T07:18:58,561 copying build/lib/funid/external/mmseqs_Windows/mmseqs.bat -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows 2024-04-18T07:18:58,564 creating build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2024-04-18T07:18:58,565 copying build/lib/funid/external/mmseqs_Windows/bin/cyggomp-1.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2024-04-18T07:18:58,571 copying build/lib/funid/external/mmseqs_Windows/bin/cygz.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2024-04-18T07:18:58,575 copying build/lib/funid/external/mmseqs_Windows/bin/cygstdc++-6.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2024-04-18T07:18:58,608 copying build/lib/funid/external/mmseqs_Windows/bin/mmseqs.exe -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2024-04-18T07:18:58,797 copying build/lib/funid/external/mmseqs_Windows/bin/cyggcc_s-seh-1.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2024-04-18T07:18:58,800 copying build/lib/funid/external/mmseqs_Windows/bin/busybox.exe -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2024-04-18T07:18:58,813 copying build/lib/funid/external/mmseqs_Windows/bin/cygbz2-1.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2024-04-18T07:18:58,817 copying build/lib/funid/external/mmseqs_Windows/bin/cygwin1.dll -> build/bdist.linux-armv7l/wheel/funid/external/mmseqs_Windows/bin 2024-04-18T07:18:58,872 creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4 2024-04-18T07:18:58,874 creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl 2024-04-18T07:18:58,875 copying build/lib/funid/external/trimal.v1.4/trimAl/README -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl 2024-04-18T07:18:58,878 creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,879 copying build/lib/funid/external/trimal.v1.4/trimAl/source/statisticsFiles.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,881 copying build/lib/funid/external/trimal.v1.4/trimAl/source/readAl.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,883 copying build/lib/funid/external/trimal.v1.4/trimAl/source/statisticsFiles.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,885 copying build/lib/funid/external/trimal.v1.4/trimAl/source/sequencesMatrix.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,887 copying build/lib/funid/external/trimal.v1.4/trimAl/source/makefile.MacOS -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,889 copying build/lib/funid/external/trimal.v1.4/trimAl/source/makefile -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,891 copying build/lib/funid/external/trimal.v1.4/trimAl/source/statAl.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,893 copying build/lib/funid/external/trimal.v1.4/trimAl/source/statisticsConservation.o -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,896 copying build/lib/funid/external/trimal.v1.4/trimAl/source/statisticsConservation.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,898 copying build/lib/funid/external/trimal.v1.4/trimAl/source/similarityMatrix.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,900 copying build/lib/funid/external/trimal.v1.4/trimAl/source/sequencesMatrix.o -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,902 copying build/lib/funid/external/trimal.v1.4/trimAl/source/autAlignment.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,905 copying build/lib/funid/external/trimal.v1.4/trimAl/source/statisticsGaps.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,908 copying build/lib/funid/external/trimal.v1.4/trimAl/source/utils.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,910 copying build/lib/funid/external/trimal.v1.4/trimAl/source/alignment.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,913 copying build/lib/funid/external/trimal.v1.4/trimAl/source/alignment.o -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,917 copying build/lib/funid/external/trimal.v1.4/trimAl/source/rwAlignment.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,921 copying build/lib/funid/external/trimal.v1.4/trimAl/source/statisticsGaps.o -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,923 copying build/lib/funid/external/trimal.v1.4/trimAl/source/alignment.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,927 copying build/lib/funid/external/trimal.v1.4/trimAl/source/sequencesMatrix.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,929 copying build/lib/funid/external/trimal.v1.4/trimAl/source/compareFiles.o -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,932 copying build/lib/funid/external/trimal.v1.4/trimAl/source/readal.exe -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,939 copying build/lib/funid/external/trimal.v1.4/trimAl/source/autAlignment.o -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,941 copying build/lib/funid/external/trimal.v1.4/trimAl/source/rwAlignment.o -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,945 copying build/lib/funid/external/trimal.v1.4/trimAl/source/similarityMatrix.o -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,948 copying build/lib/funid/external/trimal.v1.4/trimAl/source/defines.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,950 copying build/lib/funid/external/trimal.v1.4/trimAl/source/values.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,952 copying build/lib/funid/external/trimal.v1.4/trimAl/source/compareFiles.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,954 copying build/lib/funid/external/trimal.v1.4/trimAl/source/main.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,958 copying build/lib/funid/external/trimal.v1.4/trimAl/source/similarityMatrix.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,960 copying build/lib/funid/external/trimal.v1.4/trimAl/source/statal.exe -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,966 copying build/lib/funid/external/trimal.v1.4/trimAl/source/statisticsGaps.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,968 copying build/lib/funid/external/trimal.v1.4/trimAl/source/utils.o -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,971 copying build/lib/funid/external/trimal.v1.4/trimAl/source/compareFiles.cpp -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,973 copying build/lib/funid/external/trimal.v1.4/trimAl/source/statisticsConservation.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,975 copying build/lib/funid/external/trimal.v1.4/trimAl/source/utils.h -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/source 2024-04-18T07:18:58,978 creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/scripts 2024-04-18T07:18:58,979 copying build/lib/funid/external/trimal.v1.4/trimAl/scripts/set_manual_boundaries.py -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/scripts 2024-04-18T07:18:58,981 copying build/lib/funid/external/trimal.v1.4/trimAl/scripts/compare_trimmed_msas.sh -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/scripts 2024-04-18T07:18:58,983 copying build/lib/funid/external/trimal.v1.4/trimAl/scripts/generate_trimmed_msas.sh -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/scripts 2024-04-18T07:18:58,987 copying build/lib/funid/external/trimal.v1.4/trimAl/scripts/get_sequence_representative_from_alignment.py -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/scripts 2024-04-18T07:18:58,989 copying build/lib/funid/external/trimal.v1.4/trimAl/scripts/get_sequences_gaps_ratio.py -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/scripts 2024-04-18T07:18:58,991 copying build/lib/funid/external/trimal.v1.4/trimAl/scripts/check_codon_alignments.py -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/scripts 2024-04-18T07:18:58,993 copying build/lib/funid/external/trimal.v1.4/trimAl/scripts/remove_shorter_sequences.py -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/scripts 2024-04-18T07:18:58,995 copying build/lib/funid/external/trimal.v1.4/trimAl/scripts/selective_trimming_for_dNdS_analyses.based_neighbours.py -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/scripts 2024-04-18T07:18:58,998 copying build/lib/funid/external/trimal.v1.4/trimAl/scripts/generateRandomAlignmentsUsingAsSeedRealAlignments.py -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/scripts 2024-04-18T07:18:59,000 copying build/lib/funid/external/trimal.v1.4/trimAl/CHANGELOG -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl 2024-04-18T07:18:59,002 copying build/lib/funid/external/trimal.v1.4/trimAl/AUTHORS -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl 2024-04-18T07:18:59,004 copying build/lib/funid/external/trimal.v1.4/trimAl/LICENSE -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl 2024-04-18T07:18:59,007 creating build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/bin 2024-04-18T07:18:59,008 copying build/lib/funid/external/trimal.v1.4/trimAl/bin/libstdc++-6.dll -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/bin 2024-04-18T07:18:59,047 copying build/lib/funid/external/trimal.v1.4/trimAl/bin/trimal.exe -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/bin 2024-04-18T07:18:59,058 copying build/lib/funid/external/trimal.v1.4/trimAl/bin/libgcc_s_dw2-1.dll -> build/bdist.linux-armv7l/wheel/funid/external/trimal.v1.4/trimAl/bin 2024-04-18T07:18:59,081 creating build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.2.2.7-Windows 2024-04-18T07:18:59,082 copying build/lib/funid/external/iqtree-2.2.2.7-Windows/example.nex -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.2.2.7-Windows 2024-04-18T07:18:59,084 copying build/lib/funid/external/iqtree-2.2.2.7-Windows/example.phy -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.2.2.7-Windows 2024-04-18T07:18:59,088 copying build/lib/funid/external/iqtree-2.2.2.7-Windows/example.cf -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.2.2.7-Windows 2024-04-18T07:18:59,140 copying build/lib/funid/external/iqtree-2.2.2.7-Windows/models.nex -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.2.2.7-Windows 2024-04-18T07:18:59,144 creating build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.2.2.7-Windows/bin 2024-04-18T07:18:59,145 copying build/lib/funid/external/iqtree-2.2.2.7-Windows/bin/iqtree2.exe -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.2.2.7-Windows/bin 2024-04-18T07:18:59,314 copying build/lib/funid/external/iqtree-2.2.2.7-Windows/bin/libiomp5md.dll -> build/bdist.linux-armv7l/wheel/funid/external/iqtree-2.2.2.7-Windows/bin 2024-04-18T07:18:59,332 copying build/lib/funid/external/MAFFT_Windows.zip -> build/bdist.linux-armv7l/wheel/funid/external 2024-04-18T07:18:59,734 creating build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b 2024-04-18T07:18:59,735 creating build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2024-04-18T07:18:59,736 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Gblocks.exe -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2024-04-18T07:18:59,743 creating build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation 2024-04-18T07:18:59,744 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation/Gblocks_documentation.html -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation 2024-04-18T07:18:59,747 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/paths -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2024-04-18T07:18:59,749 creating build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2024-04-18T07:18:59,750 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cytb.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2024-04-18T07:18:59,753 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cox2.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2024-04-18T07:18:59,755 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad5.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2024-04-18T07:18:59,758 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad3.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments 2024-04-18T07:18:59,760 copying build/lib/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/nad3.pir -> build/bdist.linux-armv7l/wheel/funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b 2024-04-18T07:18:59,761 copying build/lib/funid/external/MAFFT_LICENSE -> build/bdist.linux-armv7l/wheel/funid/external 2024-04-18T07:18:59,764 copying build/lib/funid/external/__init__.py -> build/bdist.linux-armv7l/wheel/funid/external 2024-04-18T07:18:59,766 creating build/bdist.linux-armv7l/wheel/funid/external/FastTree_Windows 2024-04-18T07:18:59,767 copying build/lib/funid/external/FastTree_Windows/FastTree.exe -> build/bdist.linux-armv7l/wheel/funid/external/FastTree_Windows 2024-04-18T07:18:59,775 creating build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows 2024-04-18T07:18:59,776 copying build/lib/funid/external/BLAST_Windows/Uninstall-ncbi-blast-2.12.0+.exe -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows 2024-04-18T07:18:59,780 creating build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/doc 2024-04-18T07:18:59,781 copying build/lib/funid/external/BLAST_Windows/doc/README.txt -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/doc 2024-04-18T07:18:59,783 creating build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2024-04-18T07:18:59,784 copying build/lib/funid/external/BLAST_Windows/bin/update_blastdb.pl -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2024-04-18T07:18:59,787 copying build/lib/funid/external/BLAST_Windows/bin/cleanup-blastdb-volumes.py -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2024-04-18T07:18:59,789 copying build/lib/funid/external/BLAST_Windows/bin/nghttp2.dll -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2024-04-18T07:18:59,794 copying build/lib/funid/external/BLAST_Windows/bin/legacy_blast.pl -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2024-04-18T07:18:59,797 copying build/lib/funid/external/BLAST_Windows/bin/makeblastdb.exe -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2024-04-18T07:18:59,984 copying build/lib/funid/external/BLAST_Windows/bin/get_species_taxids.sh -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2024-04-18T07:18:59,986 copying build/lib/funid/external/BLAST_Windows/bin/blastn.exe -> build/bdist.linux-armv7l/wheel/funid/external/BLAST_Windows/bin 2024-04-18T07:19:00,236 copying build/lib/funid/__init__.py -> build/bdist.linux-armv7l/wheel/funid 2024-04-18T07:19:00,237 copying build/lib/funid/main.py -> build/bdist.linux-armv7l/wheel/funid 2024-04-18T07:19:00,239 running install_egg_info 2024-04-18T07:19:00,270 Copying FunID.egg-info to build/bdist.linux-armv7l/wheel/FunID-0.3.18.6.2-py3.11.egg-info 2024-04-18T07:19:00,284 running install_scripts 2024-04-18T07:19:00,304 creating build/bdist.linux-armv7l/wheel/FunID-0.3.18.6.2.dist-info/WHEEL 2024-04-18T07:19:00,307 creating '/tmp/pip-wheel-636saa3_/FunID-0.3.18.6.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-04-18T07:19:00,311 adding 'funid/FunID_GUI.py' 2024-04-18T07:19:00,312 adding 'funid/__init__.py' 2024-04-18T07:19:00,314 adding 'funid/main.py' 2024-04-18T07:19:00,318 adding 'funid/data/Option_manager.xlsx' 2024-04-18T07:19:00,319 adding 'funid/data/__init__.py' 2024-04-18T07:19:00,327 adding 'funid/data/genus_line.txt' 2024-04-18T07:19:00,333 adding 'funid/external/MAFFT_LICENSE' 2024-04-18T07:19:03,465 adding 'funid/external/MAFFT_Windows.zip' 2024-04-18T07:19:03,634 adding 'funid/external/__init__.py' 2024-04-18T07:19:03,643 adding 'funid/external/BLAST_Windows/Uninstall-ncbi-blast-2.12.0+.exe' 2024-04-18T07:19:06,604 adding 'funid/external/BLAST_Windows/bin/blastn.exe' 2024-04-18T07:19:06,710 adding 'funid/external/BLAST_Windows/bin/cleanup-blastdb-volumes.py' 2024-04-18T07:19:06,712 adding 'funid/external/BLAST_Windows/bin/get_species_taxids.sh' 2024-04-18T07:19:06,716 adding 'funid/external/BLAST_Windows/bin/legacy_blast.pl' 2024-04-18T07:19:08,769 adding 'funid/external/BLAST_Windows/bin/makeblastdb.exe' 2024-04-18T07:19:08,869 adding 'funid/external/BLAST_Windows/bin/nghttp2.dll' 2024-04-18T07:19:08,873 adding 'funid/external/BLAST_Windows/bin/update_blastdb.pl' 2024-04-18T07:19:08,875 adding 'funid/external/BLAST_Windows/doc/README.txt' 2024-04-18T07:19:08,931 adding 'funid/external/FastTree_Windows/FastTree.exe' 2024-04-18T07:19:08,973 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Gblocks.exe' 2024-04-18T07:19:08,976 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/nad3.pir' 2024-04-18T07:19:08,978 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/paths' 2024-04-18T07:19:08,983 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/Documentation/Gblocks_documentation.html' 2024-04-18T07:19:08,985 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cox2.pir' 2024-04-18T07:19:08,987 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/cytb.pir' 2024-04-18T07:19:08,989 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad3.pir' 2024-04-18T07:19:08,991 adding 'funid/external/Gblocks_Windows_0.91b/Gblocks_0.91b/more_alignments/nad5.pir' 2024-04-18T07:19:08,997 adding 'funid/external/RAxML_Windows/GPL-3.0.txt' 2024-04-18T07:19:08,999 adding 'funid/external/RAxML_Windows/README' 2024-04-18T07:19:09,290 adding 'funid/external/RAxML_Windows/raxmlHPC-PTHREADS-AVX2.exe' 2024-04-18T07:19:09,414 adding 'funid/external/iqtree-2.2.2.7-Windows/example.cf' 2024-04-18T07:19:09,430 adding 'funid/external/iqtree-2.2.2.7-Windows/example.nex' 2024-04-18T07:19:09,442 adding 'funid/external/iqtree-2.2.2.7-Windows/example.phy' 2024-04-18T07:19:09,472 adding 'funid/external/iqtree-2.2.2.7-Windows/models.nex' 2024-04-18T07:19:11,484 adding 'funid/external/iqtree-2.2.2.7-Windows/bin/iqtree2.exe' 2024-04-18T07:19:11,742 adding 'funid/external/iqtree-2.2.2.7-Windows/bin/libiomp5md.dll' 2024-04-18T07:19:11,755 adding 'funid/external/mmseqs_Windows/LICENSE.md' 2024-04-18T07:19:11,758 adding 'funid/external/mmseqs_Windows/README.md' 2024-04-18T07:19:11,759 adding 'funid/external/mmseqs_Windows/mmseqs.bat' 2024-04-18T07:19:11,893 adding 'funid/external/mmseqs_Windows/bin/busybox.exe' 2024-04-18T07:19:11,907 adding 'funid/external/mmseqs_Windows/bin/cygbz2-1.dll' 2024-04-18T07:19:11,920 adding 'funid/external/mmseqs_Windows/bin/cyggcc_s-seh-1.dll' 2024-04-18T07:19:11,963 adding 'funid/external/mmseqs_Windows/bin/cyggomp-1.dll' 2024-04-18T07:19:12,225 adding 'funid/external/mmseqs_Windows/bin/cygstdc++-6.dll' 2024-04-18T07:19:12,873 adding 'funid/external/mmseqs_Windows/bin/cygwin1.dll' 2024-04-18T07:19:12,910 adding 'funid/external/mmseqs_Windows/bin/cygz.dll' 2024-04-18T07:19:16,208 adding 'funid/external/mmseqs_Windows/bin/mmseqs.exe' 2024-04-18T07:19:16,332 adding 'funid/external/mmseqs_Windows/examples/QUERY.fasta' 2024-04-18T07:19:16,336 adding 'funid/external/mmseqs_Windows/matrices/PAM10.out' 2024-04-18T07:19:16,338 adding 'funid/external/mmseqs_Windows/matrices/PAM100.out' 2024-04-18T07:19:16,339 adding 'funid/external/mmseqs_Windows/matrices/PAM110.out' 2024-04-18T07:19:16,340 adding 'funid/external/mmseqs_Windows/matrices/PAM120.out' 2024-04-18T07:19:16,342 adding 'funid/external/mmseqs_Windows/matrices/PAM130.out' 2024-04-18T07:19:16,343 adding 'funid/external/mmseqs_Windows/matrices/PAM140.out' 2024-04-18T07:19:16,344 adding 'funid/external/mmseqs_Windows/matrices/PAM150.out' 2024-04-18T07:19:16,346 adding 'funid/external/mmseqs_Windows/matrices/PAM160.out' 2024-04-18T07:19:16,347 adding 'funid/external/mmseqs_Windows/matrices/PAM170.out' 2024-04-18T07:19:16,348 adding 'funid/external/mmseqs_Windows/matrices/PAM180.out' 2024-04-18T07:19:16,350 adding 'funid/external/mmseqs_Windows/matrices/PAM190.out' 2024-04-18T07:19:16,351 adding 'funid/external/mmseqs_Windows/matrices/PAM20.out' 2024-04-18T07:19:16,353 adding 'funid/external/mmseqs_Windows/matrices/PAM30.out' 2024-04-18T07:19:16,354 adding 'funid/external/mmseqs_Windows/matrices/PAM40.out' 2024-04-18T07:19:16,356 adding 'funid/external/mmseqs_Windows/matrices/PAM50.out' 2024-04-18T07:19:16,357 adding 'funid/external/mmseqs_Windows/matrices/PAM60.out' 2024-04-18T07:19:16,359 adding 'funid/external/mmseqs_Windows/matrices/PAM70.out' 2024-04-18T07:19:16,360 adding 'funid/external/mmseqs_Windows/matrices/PAM80.out' 2024-04-18T07:19:16,361 adding 'funid/external/mmseqs_Windows/matrices/PAM90.out' 2024-04-18T07:19:16,363 adding 'funid/external/mmseqs_Windows/matrices/VTML10.out' 2024-04-18T07:19:16,364 adding 'funid/external/mmseqs_Windows/matrices/VTML120.out' 2024-04-18T07:19:16,366 adding 'funid/external/mmseqs_Windows/matrices/VTML160.out' 2024-04-18T07:19:16,367 adding 'funid/external/mmseqs_Windows/matrices/VTML20.out' 2024-04-18T07:19:16,369 adding 'funid/external/mmseqs_Windows/matrices/VTML40.out' 2024-04-18T07:19:16,370 adding 'funid/external/mmseqs_Windows/matrices/VTML80.out' 2024-04-18T07:19:16,372 adding 'funid/external/mmseqs_Windows/matrices/blosum100.out' 2024-04-18T07:19:16,373 adding 'funid/external/mmseqs_Windows/matrices/blosum30.out' 2024-04-18T07:19:16,375 adding 'funid/external/mmseqs_Windows/matrices/blosum35.out' 2024-04-18T07:19:16,376 adding 'funid/external/mmseqs_Windows/matrices/blosum40.out' 2024-04-18T07:19:16,378 adding 'funid/external/mmseqs_Windows/matrices/blosum45.out' 2024-04-18T07:19:16,379 adding 'funid/external/mmseqs_Windows/matrices/blosum50.out' 2024-04-18T07:19:16,381 adding 'funid/external/mmseqs_Windows/matrices/blosum55.out' 2024-04-18T07:19:16,382 adding 'funid/external/mmseqs_Windows/matrices/blosum60.out' 2024-04-18T07:19:16,384 adding 'funid/external/mmseqs_Windows/matrices/blosum62.out' 2024-04-18T07:19:16,385 adding 'funid/external/mmseqs_Windows/matrices/blosum65.out' 2024-04-18T07:19:16,387 adding 'funid/external/mmseqs_Windows/matrices/blosum70.out' 2024-04-18T07:19:16,388 adding 'funid/external/mmseqs_Windows/matrices/blosum75.out' 2024-04-18T07:19:16,390 adding 'funid/external/mmseqs_Windows/matrices/blosum80.out' 2024-04-18T07:19:16,391 adding 'funid/external/mmseqs_Windows/matrices/blosum85.out' 2024-04-18T07:19:16,393 adding 'funid/external/mmseqs_Windows/matrices/blosum90.out' 2024-04-18T07:19:16,394 adding 'funid/external/mmseqs_Windows/matrices/blosum95.out' 2024-04-18T07:19:16,396 adding 'funid/external/mmseqs_Windows/matrices/nucleotide.out' 2024-04-18T07:19:16,397 adding 'funid/external/mmseqs_Windows/util/bash-completion.sh' 2024-04-18T07:19:16,399 adding 'funid/external/trimal.v1.4/trimAl/AUTHORS' 2024-04-18T07:19:16,401 adding 'funid/external/trimal.v1.4/trimAl/CHANGELOG' 2024-04-18T07:19:16,407 adding 'funid/external/trimal.v1.4/trimAl/LICENSE' 2024-04-18T07:19:16,408 adding 'funid/external/trimal.v1.4/trimAl/README' 2024-04-18T07:19:16,515 adding 'funid/external/trimal.v1.4/trimAl/bin/libgcc_s_dw2-1.dll' 2024-04-18T07:19:16,686 adding 'funid/external/trimal.v1.4/trimAl/bin/libstdc++-6.dll' 2024-04-18T07:19:16,754 adding 'funid/external/trimal.v1.4/trimAl/bin/trimal.exe' 2024-04-18T07:19:16,759 adding 'funid/external/trimal.v1.4/trimAl/scripts/check_codon_alignments.py' 2024-04-18T07:19:16,760 adding 'funid/external/trimal.v1.4/trimAl/scripts/compare_trimmed_msas.sh' 2024-04-18T07:19:16,761 adding 'funid/external/trimal.v1.4/trimAl/scripts/generateRandomAlignmentsUsingAsSeedRealAlignments.py' 2024-04-18T07:19:16,765 adding 'funid/external/trimal.v1.4/trimAl/scripts/generate_trimmed_msas.sh' 2024-04-18T07:19:16,767 adding 'funid/external/trimal.v1.4/trimAl/scripts/get_sequence_representative_from_alignment.py' 2024-04-18T07:19:16,769 adding 'funid/external/trimal.v1.4/trimAl/scripts/get_sequences_gaps_ratio.py' 2024-04-18T07:19:16,770 adding 'funid/external/trimal.v1.4/trimAl/scripts/remove_shorter_sequences.py' 2024-04-18T07:19:16,772 adding 'funid/external/trimal.v1.4/trimAl/scripts/selective_trimming_for_dNdS_analyses.based_neighbours.py' 2024-04-18T07:19:16,774 adding 'funid/external/trimal.v1.4/trimAl/scripts/set_manual_boundaries.py' 2024-04-18T07:19:16,787 adding 'funid/external/trimal.v1.4/trimAl/source/alignment.cpp' 2024-04-18T07:19:16,790 adding 'funid/external/trimal.v1.4/trimAl/source/alignment.h' 2024-04-18T07:19:16,814 adding 'funid/external/trimal.v1.4/trimAl/source/alignment.o' 2024-04-18T07:19:16,817 adding 'funid/external/trimal.v1.4/trimAl/source/autAlignment.cpp' 2024-04-18T07:19:16,820 adding 'funid/external/trimal.v1.4/trimAl/source/autAlignment.o' 2024-04-18T07:19:16,823 adding 'funid/external/trimal.v1.4/trimAl/source/compareFiles.cpp' 2024-04-18T07:19:16,825 adding 'funid/external/trimal.v1.4/trimAl/source/compareFiles.h' 2024-04-18T07:19:16,828 adding 'funid/external/trimal.v1.4/trimAl/source/compareFiles.o' 2024-04-18T07:19:16,829 adding 'funid/external/trimal.v1.4/trimAl/source/defines.h' 2024-04-18T07:19:16,836 adding 'funid/external/trimal.v1.4/trimAl/source/main.cpp' 2024-04-18T07:19:16,838 adding 'funid/external/trimal.v1.4/trimAl/source/makefile' 2024-04-18T07:19:16,839 adding 'funid/external/trimal.v1.4/trimAl/source/makefile.MacOS' 2024-04-18T07:19:16,841 adding 'funid/external/trimal.v1.4/trimAl/source/readAl.cpp' 2024-04-18T07:19:16,887 adding 'funid/external/trimal.v1.4/trimAl/source/readal.exe' 2024-04-18T07:19:16,896 adding 'funid/external/trimal.v1.4/trimAl/source/rwAlignment.cpp' 2024-04-18T07:19:16,911 adding 'funid/external/trimal.v1.4/trimAl/source/rwAlignment.o' 2024-04-18T07:19:16,913 adding 'funid/external/trimal.v1.4/trimAl/source/sequencesMatrix.cpp' 2024-04-18T07:19:16,914 adding 'funid/external/trimal.v1.4/trimAl/source/sequencesMatrix.h' 2024-04-18T07:19:16,916 adding 'funid/external/trimal.v1.4/trimAl/source/sequencesMatrix.o' 2024-04-18T07:19:16,918 adding 'funid/external/trimal.v1.4/trimAl/source/similarityMatrix.cpp' 2024-04-18T07:19:16,920 adding 'funid/external/trimal.v1.4/trimAl/source/similarityMatrix.h' 2024-04-18T07:19:16,922 adding 'funid/external/trimal.v1.4/trimAl/source/similarityMatrix.o' 2024-04-18T07:19:16,925 adding 'funid/external/trimal.v1.4/trimAl/source/statAl.cpp' 2024-04-18T07:19:16,973 adding 'funid/external/trimal.v1.4/trimAl/source/statal.exe' 2024-04-18T07:19:16,978 adding 'funid/external/trimal.v1.4/trimAl/source/statisticsConservation.cpp' 2024-04-18T07:19:16,979 adding 'funid/external/trimal.v1.4/trimAl/source/statisticsConservation.h' 2024-04-18T07:19:16,982 adding 'funid/external/trimal.v1.4/trimAl/source/statisticsConservation.o' 2024-04-18T07:19:16,983 adding 'funid/external/trimal.v1.4/trimAl/source/statisticsFiles.cpp' 2024-04-18T07:19:16,984 adding 'funid/external/trimal.v1.4/trimAl/source/statisticsFiles.h' 2024-04-18T07:19:16,987 adding 'funid/external/trimal.v1.4/trimAl/source/statisticsGaps.cpp' 2024-04-18T07:19:16,988 adding 'funid/external/trimal.v1.4/trimAl/source/statisticsGaps.h' 2024-04-18T07:19:16,991 adding 'funid/external/trimal.v1.4/trimAl/source/statisticsGaps.o' 2024-04-18T07:19:16,994 adding 'funid/external/trimal.v1.4/trimAl/source/utils.cpp' 2024-04-18T07:19:16,995 adding 'funid/external/trimal.v1.4/trimAl/source/utils.h' 2024-04-18T07:19:16,999 adding 'funid/external/trimal.v1.4/trimAl/source/utils.o' 2024-04-18T07:19:17,001 adding 'funid/external/trimal.v1.4/trimAl/source/values.h' 2024-04-18T07:19:17,002 adding 'funid/preset/accurate.yaml' 2024-04-18T07:19:17,004 adding 'funid/preset/fast.yaml' 2024-04-18T07:19:17,006 adding 'funid/src/__init__.py' 2024-04-18T07:19:17,007 adding 'funid/src/align.py' 2024-04-18T07:19:17,010 adding 'funid/src/cluster.py' 2024-04-18T07:19:17,012 adding 'funid/src/command.py' 2024-04-18T07:19:17,014 adding 'funid/src/concatenate.py' 2024-04-18T07:19:17,017 adding 'funid/src/dataset.py' 2024-04-18T07:19:17,019 adding 'funid/src/ext.py' 2024-04-18T07:19:17,021 adding 'funid/src/hasher.py' 2024-04-18T07:19:17,023 adding 'funid/src/initialize.py' 2024-04-18T07:19:17,024 adding 'funid/src/logger.py' 2024-04-18T07:19:17,026 adding 'funid/src/logics.py' 2024-04-18T07:19:17,029 adding 'funid/src/manage_input.py' 2024-04-18T07:19:17,031 adding 'funid/src/modeltest.py' 2024-04-18T07:19:17,033 adding 'funid/src/ncbi.py' 2024-04-18T07:19:17,034 adding 'funid/src/opt_generator.py' 2024-04-18T07:19:17,036 adding 'funid/src/patch.py' 2024-04-18T07:19:17,039 adding 'funid/src/reporter.py' 2024-04-18T07:19:17,041 adding 'funid/src/save.py' 2024-04-18T07:19:17,043 adding 'funid/src/search.py' 2024-04-18T07:19:17,045 adding 'funid/src/tool.py' 2024-04-18T07:19:17,047 adding 'funid/src/tree.py' 2024-04-18T07:19:17,052 adding 'funid/src/tree_interpretation.py' 2024-04-18T07:19:17,055 adding 'funid/src/tree_interpretation_pipe.py' 2024-04-18T07:19:17,057 adding 'funid/src/trim.py' 2024-04-18T07:19:17,062 adding 'funid/src/validate_option.py' 2024-04-18T07:19:17,064 adding 'funid/src/validation.py' 2024-04-18T07:19:17,066 adding 'funid/test_dataset/penicillium/Options.config' 2024-04-18T07:19:17,067 adding 'funid/test_dataset/penicillium/preset.yaml' 2024-04-18T07:19:17,105 adding 'funid/test_dataset/penicillium/DB/DB_Penicillium.xlsx' 2024-04-18T07:19:17,113 adding 'funid/test_dataset/penicillium/Query/Query.xlsx' 2024-04-18T07:19:17,115 adding 'funid/test_dataset/terrei/Options.config' 2024-04-18T07:19:17,116 adding 'funid/test_dataset/terrei/preset.yaml' 2024-04-18T07:19:17,118 adding 'funid/test_dataset/terrei/DB/FunID_Aspergillus_db.xlsx' 2024-04-18T07:19:17,121 adding 'funid/test_dataset/terrei/Query/FunID_Aspergillus_query.xlsx' 2024-04-18T07:19:17,127 adding 'FunID-0.3.18.6.2.dist-info/LICENSE' 2024-04-18T07:19:17,128 adding 'FunID-0.3.18.6.2.dist-info/METADATA' 2024-04-18T07:19:17,129 adding 'FunID-0.3.18.6.2.dist-info/WHEEL' 2024-04-18T07:19:17,130 adding 'FunID-0.3.18.6.2.dist-info/entry_points.txt' 2024-04-18T07:19:17,131 adding 'FunID-0.3.18.6.2.dist-info/top_level.txt' 2024-04-18T07:19:17,134 adding 'FunID-0.3.18.6.2.dist-info/RECORD' 2024-04-18T07:19:17,695 removing build/bdist.linux-armv7l/wheel 2024-04-18T07:19:17,895 Building wheel for funid (setup.py): finished with status 'done' 2024-04-18T07:19:18,419 Created wheel for funid: filename=FunID-0.3.18.6.2-py3-none-any.whl size=53080393 sha256=900e85361d0c897115e576de0713cdc392d7f247379085ac9a4fd4f87d0b746f 2024-04-18T07:19:18,420 Stored in directory: /tmp/pip-ephem-wheel-cache-50yihjtv/wheels/4d/d2/e2/5e7d97b527b26fcc25e0999618b150d6984722ede9891b10d1 2024-04-18T07:19:18,454 Successfully built funid 2024-04-18T07:19:19,733 Removed build tracker: '/tmp/pip-build-tracker-jcem7gdi'