2024-04-18T16:32:47,931 Created temporary directory: /tmp/pip-build-tracker-ad_9gniz 2024-04-18T16:32:47,933 Initialized build tracking at /tmp/pip-build-tracker-ad_9gniz 2024-04-18T16:32:47,933 Created build tracker: /tmp/pip-build-tracker-ad_9gniz 2024-04-18T16:32:47,934 Entered build tracker: /tmp/pip-build-tracker-ad_9gniz 2024-04-18T16:32:47,935 Created temporary directory: /tmp/pip-wheel-2dssso3d 2024-04-18T16:32:47,938 Created temporary directory: /tmp/pip-ephem-wheel-cache-tks29_6t 2024-04-18T16:32:47,960 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-04-18T16:32:47,964 2 location(s) to search for versions of genomicranges: 2024-04-18T16:32:47,964 * https://pypi.org/simple/genomicranges/ 2024-04-18T16:32:47,964 * https://www.piwheels.org/simple/genomicranges/ 2024-04-18T16:32:47,964 Fetching project page and analyzing links: https://pypi.org/simple/genomicranges/ 2024-04-18T16:32:47,965 Getting page https://pypi.org/simple/genomicranges/ 2024-04-18T16:32:47,967 Found index url https://pypi.org/simple/ 2024-04-18T16:32:48,185 Fetched page https://pypi.org/simple/genomicranges/ as application/vnd.pypi.simple.v1+json 2024-04-18T16:32:48,199 Skipping link: No binaries permitted for genomicranges: https://files.pythonhosted.org/packages/09/b1/66124bd9f9466a6670dd49719d48f75e2c8ee39ee62b845fe2281dd5129c/GenomicRanges-0.1-py3-none-any.whl (from https://pypi.org/simple/genomicranges/) 2024-04-18T16:32:48,200 Found link https://files.pythonhosted.org/packages/f8/98/3e3203fd5e657991befa44e2dea23ec2df2c2b5573af9accdd3ddb7672b1/GenomicRanges-0.1.tar.gz (from https://pypi.org/simple/genomicranges/), version: 0.1 2024-04-18T16:32:48,201 Skipping link: No binaries permitted for genomicranges: https://files.pythonhosted.org/packages/31/29/8def5a85d78239bc4ece55984934faf89c0e0fa3afe7eddae7e83603d101/GenomicRanges-0.1.1-py3-none-any.whl (from https://pypi.org/simple/genomicranges/) 2024-04-18T16:32:48,201 Found link 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(requires-python:>=3.8), version: 0.4.12 2024-04-18T16:32:48,247 Skipping link: No binaries permitted for genomicranges: https://files.pythonhosted.org/packages/05/65/666c6d1e16e6d91b98c01d24468e749b42e39eafa51a44e0f3a48ab4c97b/GenomicRanges-0.4.13-py3-none-any.whl (from https://pypi.org/simple/genomicranges/) (requires-python:>=3.8) 2024-04-18T16:32:48,248 Found link https://files.pythonhosted.org/packages/59/43/e563ebe128bba7097f4b8088943d788db5b4da0482166ad3437bbe469c1c/GenomicRanges-0.4.13.tar.gz (from https://pypi.org/simple/genomicranges/) (requires-python:>=3.8), version: 0.4.13 2024-04-18T16:32:48,249 Skipping link: No binaries permitted for genomicranges: https://files.pythonhosted.org/packages/a3/85/4498750ac18080c92872bd97c1e264e1834c99139587797d3b403f454163/GenomicRanges-0.4.14-py3-none-any.whl (from https://pypi.org/simple/genomicranges/) (requires-python:>=3.8) 2024-04-18T16:32:48,250 Found link https://files.pythonhosted.org/packages/e6/62/d77668e0c15a14bceefe827286c1726906d550ff8e86a8759fef23956aa0/GenomicRanges-0.4.14.tar.gz (from https://pypi.org/simple/genomicranges/) (requires-python:>=3.8), version: 0.4.14 2024-04-18T16:32:48,250 Skipping link: No binaries permitted for genomicranges: https://files.pythonhosted.org/packages/e9/b0/a7b72256e2ad5f10b9bdfa0163dd9bd840ec2643c7c7a9a3d27ad7a0bccc/GenomicRanges-0.4.15-py3-none-any.whl (from https://pypi.org/simple/genomicranges/) (requires-python:>=3.8) 2024-04-18T16:32:48,251 Found link https://files.pythonhosted.org/packages/df/68/978183ec9305947a071e9f3f1252e2589f9b8202503b450ff923a56e648e/genomicranges-0.4.15.tar.gz (from https://pypi.org/simple/genomicranges/) (requires-python:>=3.8), version: 0.4.15 2024-04-18T16:32:48,252 Fetching project page and analyzing links: https://www.piwheels.org/simple/genomicranges/ 2024-04-18T16:32:48,253 Getting page https://www.piwheels.org/simple/genomicranges/ 2024-04-18T16:32:48,254 Found index url https://www.piwheels.org/simple/ 2024-04-18T16:32:48,450 Fetched page https://www.piwheels.org/simple/genomicranges/ as text/html 2024-04-18T16:32:48,460 Skipping link: No binaries permitted for genomicranges: https://www.piwheels.org/simple/genomicranges/GenomicRanges-0.4.14-py3-none-any.whl#sha256=0e604995920eb14a2786f49ad700ac46a1ecb4705d7d135a4cd7f054a073f93a (from https://www.piwheels.org/simple/genomicranges/) (requires-python:>=3.8) 2024-04-18T16:32:48,461 Skipping link: No binaries permitted for genomicranges: https://www.piwheels.org/simple/genomicranges/GenomicRanges-0.4.13-py3-none-any.whl#sha256=b253d2dca62327c5013e032bdeecc1136f70fc985eff130c24ee303249d7ffa5 (from https://www.piwheels.org/simple/genomicranges/) (requires-python:>=3.8) 2024-04-18T16:32:48,461 Skipping link: No binaries permitted for genomicranges: 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https://www.piwheels.org/simple/genomicranges/GenomicRanges-0.2.7-py3-none-any.whl#sha256=708985949d6f680693bf3e0a9731e999f85d8d39b59c26514544543a46df46cf (from https://www.piwheels.org/simple/genomicranges/) 2024-04-18T16:32:48,478 Skipping link: No binaries permitted for genomicranges: https://www.piwheels.org/simple/genomicranges/GenomicRanges-0.2.6-py3-none-any.whl#sha256=319269c9ff09b906843541695c9c9ab49813f2760549ffc9bc1aeb5f48cdbc7a (from https://www.piwheels.org/simple/genomicranges/) 2024-04-18T16:32:48,479 Skipping link: No binaries permitted for genomicranges: https://www.piwheels.org/simple/genomicranges/GenomicRanges-0.2-py3-none-any.whl#sha256=13e5945ef21f2d062b6268ed8399dee27baa6e7f567898334ff5bce7f690c995 (from https://www.piwheels.org/simple/genomicranges/) 2024-04-18T16:32:48,479 Skipping link: No binaries permitted for genomicranges: https://www.piwheels.org/simple/genomicranges/GenomicRanges-0.1.1-py3-none-any.whl#sha256=6728545e04f3d54afc4ef16ea9e031842e6a1d3db474b34c2dd7b0af700be3d6 (from https://www.piwheels.org/simple/genomicranges/) 2024-04-18T16:32:48,479 Skipping link: No binaries permitted for genomicranges: https://www.piwheels.org/simple/genomicranges/GenomicRanges-0.1-py3-none-any.whl#sha256=d2109a9a366cf41f6ee4a8d33fd2c3ec02a2048d4fb5d7468801e434b6c1ee4c (from https://www.piwheels.org/simple/genomicranges/) 2024-04-18T16:32:48,480 Skipping link: not a file: https://www.piwheels.org/simple/genomicranges/ 2024-04-18T16:32:48,480 Skipping link: not a file: https://pypi.org/simple/genomicranges/ 2024-04-18T16:32:48,503 Given no hashes to check 1 links for project 'genomicranges': discarding no candidates 2024-04-18T16:32:48,521 Collecting genomicranges==0.4.15 2024-04-18T16:32:48,524 Created temporary directory: /tmp/pip-unpack-ti8fm1an 2024-04-18T16:32:48,741 Downloading genomicranges-0.4.15.tar.gz (60 kB) 2024-04-18T16:32:48,911 Added genomicranges==0.4.15 from https://files.pythonhosted.org/packages/df/68/978183ec9305947a071e9f3f1252e2589f9b8202503b450ff923a56e648e/genomicranges-0.4.15.tar.gz to build tracker '/tmp/pip-build-tracker-ad_9gniz' 2024-04-18T16:32:48,917 Created temporary directory: /tmp/pip-build-env-886rjjio 2024-04-18T16:32:48,922 Installing build dependencies: started 2024-04-18T16:32:48,923 Running command pip subprocess to install build dependencies 2024-04-18T16:32:50,094 Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-04-18T16:32:50,594 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-04-18T16:32:52,069 Collecting setuptools>=46.1.0 2024-04-18T16:32:52,084 Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.5.1-py3-none-any.whl (894 kB) 2024-04-18T16:32:52,391 Collecting setuptools_scm>=5 (from setuptools_scm[toml]>=5) 2024-04-18T16:32:52,405 Using cached https://www.piwheels.org/simple/setuptools-scm/setuptools_scm-8.0.4-py3-none-any.whl (42 kB) 2024-04-18T16:32:52,610 Collecting wheel 2024-04-18T16:32:52,625 Using cached https://www.piwheels.org/simple/wheel/wheel-0.43.0-py3-none-any.whl (65 kB) 2024-04-18T16:32:52,958 Collecting packaging>=20 (from setuptools_scm>=5->setuptools_scm[toml]>=5) 2024-04-18T16:32:52,972 Using cached https://www.piwheels.org/simple/packaging/packaging-24.0-py3-none-any.whl (53 kB) 2024-04-18T16:32:53,088 Collecting typing-extensions (from setuptools_scm>=5->setuptools_scm[toml]>=5) 2024-04-18T16:32:53,102 Using cached https://www.piwheels.org/simple/typing-extensions/typing_extensions-4.11.0-py3-none-any.whl (34 kB) 2024-04-18T16:32:55,659 Installing collected packages: wheel, typing-extensions, setuptools, packaging, setuptools_scm 2024-04-18T16:32:55,888 Creating /tmp/pip-build-env-886rjjio/overlay/local/bin 2024-04-18T16:32:55,891 changing mode of /tmp/pip-build-env-886rjjio/overlay/local/bin/wheel to 755 2024-04-18T16:32:58,743 Successfully installed packaging-24.0 setuptools-69.5.1 setuptools_scm-8.0.4 typing-extensions-4.11.0 wheel-0.43.0 2024-04-18T16:32:59,255 Installing build dependencies: finished with status 'done' 2024-04-18T16:32:59,258 Getting requirements to build wheel: started 2024-04-18T16:32:59,260 Running command Getting requirements to build wheel 2024-04-18T16:33:00,007 running egg_info 2024-04-18T16:33:00,013 writing src/GenomicRanges.egg-info/PKG-INFO 2024-04-18T16:33:00,020 writing dependency_links to src/GenomicRanges.egg-info/dependency_links.txt 2024-04-18T16:33:00,023 writing requirements to src/GenomicRanges.egg-info/requires.txt 2024-04-18T16:33:00,024 writing top-level names to src/GenomicRanges.egg-info/top_level.txt 2024-04-18T16:33:00,073 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-04-18T16:33:00,077 reading manifest file 'src/GenomicRanges.egg-info/SOURCES.txt' 2024-04-18T16:33:00,081 adding license file 'LICENSE.txt' 2024-04-18T16:33:00,085 writing manifest file 'src/GenomicRanges.egg-info/SOURCES.txt' 2024-04-18T16:33:00,175 Getting requirements to build wheel: finished with status 'done' 2024-04-18T16:33:00,184 Created temporary directory: /tmp/pip-modern-metadata-dpo124rs 2024-04-18T16:33:00,186 Preparing metadata (pyproject.toml): started 2024-04-18T16:33:00,188 Running command Preparing metadata (pyproject.toml) 2024-04-18T16:33:00,831 running dist_info 2024-04-18T16:33:00,837 creating /tmp/pip-modern-metadata-dpo124rs/GenomicRanges.egg-info 2024-04-18T16:33:00,842 writing /tmp/pip-modern-metadata-dpo124rs/GenomicRanges.egg-info/PKG-INFO 2024-04-18T16:33:00,850 writing dependency_links to /tmp/pip-modern-metadata-dpo124rs/GenomicRanges.egg-info/dependency_links.txt 2024-04-18T16:33:00,853 writing requirements to /tmp/pip-modern-metadata-dpo124rs/GenomicRanges.egg-info/requires.txt 2024-04-18T16:33:00,854 writing top-level names to /tmp/pip-modern-metadata-dpo124rs/GenomicRanges.egg-info/top_level.txt 2024-04-18T16:33:00,855 writing manifest file '/tmp/pip-modern-metadata-dpo124rs/GenomicRanges.egg-info/SOURCES.txt' 2024-04-18T16:33:00,897 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-04-18T16:33:00,900 reading manifest file '/tmp/pip-modern-metadata-dpo124rs/GenomicRanges.egg-info/SOURCES.txt' 2024-04-18T16:33:00,902 adding license file 'LICENSE.txt' 2024-04-18T16:33:00,905 writing manifest file '/tmp/pip-modern-metadata-dpo124rs/GenomicRanges.egg-info/SOURCES.txt' 2024-04-18T16:33:00,906 creating '/tmp/pip-modern-metadata-dpo124rs/GenomicRanges-0.4.15.dist-info' 2024-04-18T16:33:01,087 Preparing metadata (pyproject.toml): finished with status 'done' 2024-04-18T16:33:01,092 Source in /tmp/pip-wheel-2dssso3d/genomicranges_bb6d0c42670e417e96ddc43d7c42c028 has version 0.4.15, which satisfies requirement genomicranges==0.4.15 from https://files.pythonhosted.org/packages/df/68/978183ec9305947a071e9f3f1252e2589f9b8202503b450ff923a56e648e/genomicranges-0.4.15.tar.gz 2024-04-18T16:33:01,093 Removed genomicranges==0.4.15 from https://files.pythonhosted.org/packages/df/68/978183ec9305947a071e9f3f1252e2589f9b8202503b450ff923a56e648e/genomicranges-0.4.15.tar.gz from build tracker '/tmp/pip-build-tracker-ad_9gniz' 2024-04-18T16:33:01,099 Created temporary directory: /tmp/pip-unpack-xqx5zv3i 2024-04-18T16:33:01,100 Created temporary directory: /tmp/pip-unpack-yben08vr 2024-04-18T16:33:01,130 Building wheels for collected packages: genomicranges 2024-04-18T16:33:01,134 Created temporary directory: /tmp/pip-wheel-0oego9go 2024-04-18T16:33:01,134 Destination directory: /tmp/pip-wheel-0oego9go 2024-04-18T16:33:01,137 Building wheel for genomicranges (pyproject.toml): started 2024-04-18T16:33:01,138 Running command Building wheel for genomicranges (pyproject.toml) 2024-04-18T16:33:01,836 running bdist_wheel 2024-04-18T16:33:01,884 running build 2024-04-18T16:33:01,885 running build_py 2024-04-18T16:33:01,893 creating build 2024-04-18T16:33:01,894 creating build/lib 2024-04-18T16:33:01,894 creating build/lib/genomicranges 2024-04-18T16:33:01,895 copying src/genomicranges/GenomicRanges.py -> build/lib/genomicranges 2024-04-18T16:33:01,899 copying src/genomicranges/GenomicRangesList.py -> build/lib/genomicranges 2024-04-18T16:33:01,902 copying src/genomicranges/utils.py -> build/lib/genomicranges 2024-04-18T16:33:01,904 copying src/genomicranges/__init__.py -> build/lib/genomicranges 2024-04-18T16:33:01,906 copying src/genomicranges/SeqInfo.py -> build/lib/genomicranges 2024-04-18T16:33:01,909 creating build/lib/genomicranges/io 2024-04-18T16:33:01,909 copying src/genomicranges/io/ucsc.py -> build/lib/genomicranges/io 2024-04-18T16:33:01,911 copying src/genomicranges/io/__init__.py -> build/lib/genomicranges/io 2024-04-18T16:33:01,913 copying src/genomicranges/io/gtf.py -> build/lib/genomicranges/io 2024-04-18T16:33:01,914 running egg_info 2024-04-18T16:33:01,919 writing src/GenomicRanges.egg-info/PKG-INFO 2024-04-18T16:33:01,926 writing dependency_links to src/GenomicRanges.egg-info/dependency_links.txt 2024-04-18T16:33:01,928 writing requirements to src/GenomicRanges.egg-info/requires.txt 2024-04-18T16:33:01,929 writing top-level names to src/GenomicRanges.egg-info/top_level.txt 2024-04-18T16:33:01,960 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-04-18T16:33:01,962 reading manifest file 'src/GenomicRanges.egg-info/SOURCES.txt' 2024-04-18T16:33:01,965 adding license file 'LICENSE.txt' 2024-04-18T16:33:01,969 writing manifest file 'src/GenomicRanges.egg-info/SOURCES.txt' 2024-04-18T16:33:01,984 installing to build/bdist.linux-armv7l/wheel 2024-04-18T16:33:01,985 running install 2024-04-18T16:33:02,008 running install_lib 2024-04-18T16:33:02,016 creating build/bdist.linux-armv7l 2024-04-18T16:33:02,016 creating build/bdist.linux-armv7l/wheel 2024-04-18T16:33:02,018 creating build/bdist.linux-armv7l/wheel/genomicranges 2024-04-18T16:33:02,019 copying build/lib/genomicranges/GenomicRanges.py -> build/bdist.linux-armv7l/wheel/genomicranges 2024-04-18T16:33:02,022 copying build/lib/genomicranges/GenomicRangesList.py -> build/bdist.linux-armv7l/wheel/genomicranges 2024-04-18T16:33:02,025 copying build/lib/genomicranges/utils.py -> build/bdist.linux-armv7l/wheel/genomicranges 2024-04-18T16:33:02,027 copying build/lib/genomicranges/__init__.py -> build/bdist.linux-armv7l/wheel/genomicranges 2024-04-18T16:33:02,029 copying build/lib/genomicranges/SeqInfo.py -> build/bdist.linux-armv7l/wheel/genomicranges 2024-04-18T16:33:02,032 creating build/bdist.linux-armv7l/wheel/genomicranges/io 2024-04-18T16:33:02,033 copying build/lib/genomicranges/io/ucsc.py -> build/bdist.linux-armv7l/wheel/genomicranges/io 2024-04-18T16:33:02,035 copying build/lib/genomicranges/io/__init__.py -> build/bdist.linux-armv7l/wheel/genomicranges/io 2024-04-18T16:33:02,037 copying build/lib/genomicranges/io/gtf.py -> build/bdist.linux-armv7l/wheel/genomicranges/io 2024-04-18T16:33:02,039 running install_egg_info 2024-04-18T16:33:02,048 Copying src/GenomicRanges.egg-info to build/bdist.linux-armv7l/wheel/GenomicRanges-0.4.15-py3.11.egg-info 2024-04-18T16:33:02,059 running install_scripts 2024-04-18T16:33:02,075 creating build/bdist.linux-armv7l/wheel/GenomicRanges-0.4.15.dist-info/WHEEL 2024-04-18T16:33:02,077 creating '/tmp/pip-wheel-0oego9go/.tmp-sjoqnaj0/GenomicRanges-0.4.15-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-04-18T16:33:02,088 adding 'genomicranges/GenomicRanges.py' 2024-04-18T16:33:02,092 adding 'genomicranges/GenomicRangesList.py' 2024-04-18T16:33:02,095 adding 'genomicranges/SeqInfo.py' 2024-04-18T16:33:02,096 adding 'genomicranges/__init__.py' 2024-04-18T16:33:02,098 adding 'genomicranges/utils.py' 2024-04-18T16:33:02,100 adding 'genomicranges/io/__init__.py' 2024-04-18T16:33:02,101 adding 'genomicranges/io/gtf.py' 2024-04-18T16:33:02,103 adding 'genomicranges/io/ucsc.py' 2024-04-18T16:33:02,104 adding 'GenomicRanges-0.4.15.dist-info/LICENSE.txt' 2024-04-18T16:33:02,106 adding 'GenomicRanges-0.4.15.dist-info/METADATA' 2024-04-18T16:33:02,107 adding 'GenomicRanges-0.4.15.dist-info/WHEEL' 2024-04-18T16:33:02,108 adding 'GenomicRanges-0.4.15.dist-info/top_level.txt' 2024-04-18T16:33:02,110 adding 'GenomicRanges-0.4.15.dist-info/RECORD' 2024-04-18T16:33:02,111 removing build/bdist.linux-armv7l/wheel 2024-04-18T16:33:02,218 Building wheel for genomicranges (pyproject.toml): finished with status 'done' 2024-04-18T16:33:02,223 Created wheel for genomicranges: filename=GenomicRanges-0.4.15-py3-none-any.whl size=34548 sha256=4fdd2abb6397968b95ae2e0211751f8cb26c997800b8856b41983b0ff9a2ce18 2024-04-18T16:33:02,224 Stored in directory: /tmp/pip-ephem-wheel-cache-tks29_6t/wheels/45/85/88/39614b3aea7a788cde3bbd70851fcab0f197a1752af2380679 2024-04-18T16:33:02,235 Successfully built genomicranges 2024-04-18T16:33:02,239 Removed build tracker: '/tmp/pip-build-tracker-ad_9gniz'