2024-04-19T11:38:14,377 Created temporary directory: /tmp/pip-build-tracker-d5655o44
2024-04-19T11:38:14,378 Initialized build tracking at /tmp/pip-build-tracker-d5655o44
2024-04-19T11:38:14,378 Created build tracker: /tmp/pip-build-tracker-d5655o44
2024-04-19T11:38:14,379 Entered build tracker: /tmp/pip-build-tracker-d5655o44
2024-04-19T11:38:14,379 Created temporary directory: /tmp/pip-wheel-cbpd4337
2024-04-19T11:38:14,383 Created temporary directory: /tmp/pip-ephem-wheel-cache-lb1amqou
2024-04-19T11:38:14,404 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-04-19T11:38:14,408 2 location(s) to search for versions of moleculekit:
2024-04-19T11:38:14,408 * https://pypi.org/simple/moleculekit/
2024-04-19T11:38:14,408 * https://www.piwheels.org/simple/moleculekit/
2024-04-19T11:38:14,409 Fetching project page and analyzing links: https://pypi.org/simple/moleculekit/
2024-04-19T11:38:14,409 Getting page https://pypi.org/simple/moleculekit/
2024-04-19T11:38:14,411 Found index url https://pypi.org/simple/
2024-04-19T11:38:14,653 Fetched page https://pypi.org/simple/moleculekit/ as application/vnd.pypi.simple.v1+json
2024-04-19T11:38:14,697   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/91/e6/25b6853357dfef8a4026325e420d8213d34c17c078a2f13b60cbb6213ea3/moleculekit-0.1.4-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,697   Found link https://files.pythonhosted.org/packages/13/0f/a200e8e7632d3a521cfc7c15fa4d0270802efce40f98ac5a5cae58385b7e/moleculekit-0.1.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.4
2024-04-19T11:38:14,698   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/9f/a5/eac32fcb2e9ff0d30298aa4cec8e152c95d675c4dd1a1a5d7676986d4d75/moleculekit-0.1.5-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,699   Found link https://files.pythonhosted.org/packages/c5/6f/ae7d1b8513eb23ec0fa8e153c42fda0ee96f9e29c6e4808c5ff78c115e89/moleculekit-0.1.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.5
2024-04-19T11:38:14,700   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/e2/51/0f4e4b95d0d5c16664ede7f2cd31e6d6003e9c940a8fbe28c74de91de627/moleculekit-0.1.6-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,700   Found link https://files.pythonhosted.org/packages/08/fa/bc1b5918a1715901fd0ea1e796de9e6647276943983962616f2ddceb1c3b/moleculekit-0.1.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.6
2024-04-19T11:38:14,701   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/49/59/ddf780e7a574dde727d5db8b93c41bcc3d19436a8ae9f468bad5ea48529e/moleculekit-0.1.7-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,702   Found link https://files.pythonhosted.org/packages/c7/cb/d1b609de2d59d10a60ca74c9d1a044534f608e323dc16a87e5bd77ee0eb0/moleculekit-0.1.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.7
2024-04-19T11:38:14,703   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/5b/a4/59e6017c4e5b99be72d8e0eb6b6442061f338e309d91c25d607162298d11/moleculekit-0.1.8-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,703   Found link https://files.pythonhosted.org/packages/c0/1d/753c7461942457e39fb069504cdc381518a4ef18f486de0a42572236095e/moleculekit-0.1.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.8
2024-04-19T11:38:14,704   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/28/39/e4219020234475a17077f38ebcbdff236872d8e3a0455b376edb847f4141/moleculekit-0.1.9-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,705   Found link https://files.pythonhosted.org/packages/e0/c6/5d47b6257a3d1aca76d635d1dc8fffd6ed712fbe324bfeb2f2da47edda09/moleculekit-0.1.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.9
2024-04-19T11:38:14,705   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/3c/12/42a0a156c8a51b2ef9de7c720cbcd226c1b0a7d13dce7dcdd4c34480e05f/moleculekit-0.1.12-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,706   Found link https://files.pythonhosted.org/packages/12/9d/ef12aeb7165210a6d06f5a735640db6c49cda2597bebb3584e72f7a2aee5/moleculekit-0.1.12.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.12
2024-04-19T11:38:14,707   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/e0/de/ddea29e806547e8743801bd5b44f5f4b62e96a3b6aa1b59e7ae3c183e65d/moleculekit-0.1.14-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,707   Found link https://files.pythonhosted.org/packages/0f/b8/5dce8ade2a03ba18558275d58f1f586fc78b76442ca923e02e05b7aa4638/moleculekit-0.1.14.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.14
2024-04-19T11:38:14,708   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/98/67/c911fd0aab052ed8866739c282be96070bcafee75cad331165f356d0bf11/moleculekit-0.1.15-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,708   Found link https://files.pythonhosted.org/packages/be/5c/b803aa60ac93136e6fce9ab52ec50aec246481c5db76892780152f769d75/moleculekit-0.1.15.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.15
2024-04-19T11:38:14,709   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/4f/30/78d34f8541a5e0e7488b6d59c43b29cf4d9f42467553fb0cee41312409c7/moleculekit-0.1.16-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,710   Found link https://files.pythonhosted.org/packages/d3/39/0774efc740b7e6a6969e084e0eb126483049a60229de80cc09a1a4b78011/moleculekit-0.1.16.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.16
2024-04-19T11:38:14,710   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/ca/d8/f9dd491ee5984f59dbd1206bb41062543e1a1664bb002d4b2675ec3f882c/moleculekit-0.1.17-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,711   Found link https://files.pythonhosted.org/packages/f6/27/b820e1158e448f35830265eeb023ec7d7cc72272136a31ec5365a893174f/moleculekit-0.1.17.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.17
2024-04-19T11:38:14,711   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/0d/df/1d0dfd734e1d67c6ba1a1291b6f530c60eb3a65c25e2990d0fb62c73dbea/moleculekit-0.1.19-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,712   Found link https://files.pythonhosted.org/packages/6e/55/28d041ad7324e063e00ed2e0a5cd91d4c67e6cda3e62c24ab9c3ea2ad5dc/moleculekit-0.1.19.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.19
2024-04-19T11:38:14,713   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/f0/f3/18f3b015e5fdf04c0243d63132d4d29ab807b608bda9cab6de505c060196/moleculekit-0.1.21-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,714   Found link https://files.pythonhosted.org/packages/d7/2f/510d466d4e507523c6f8bb5323a03351e0a9e6422b29ab7a9d7b34101484/moleculekit-0.1.21.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.21
2024-04-19T11:38:14,714   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/2c/83/5bdc26bbc9c0dc6b7fa54260134f5545c6f8c01e50b4cc94de02d0a2f295/moleculekit-0.1.22-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,715   Found link https://files.pythonhosted.org/packages/28/80/3c053d293b0aad5df512b8c7bf1ef111c621ee80bbe08ea83763ca004a85/moleculekit-0.1.22.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.22
2024-04-19T11:38:14,716   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/5d/ec/9e6438a424607cba93fe71b89ef89dbff35369f133ed76ded895861ab290/moleculekit-0.1.23-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,716   Found link https://files.pythonhosted.org/packages/6d/c3/680633af7541d2c7ecf2fde4dc9661f107efaf55688d3f41d15407cb2248/moleculekit-0.1.23.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.23
2024-04-19T11:38:14,717   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/0b/02/f2bbd133b7e76a60bdc1d92d10621ce9f60f8eeaf97ed7dacae2e216cb2b/moleculekit-0.1.24-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,718   Found link https://files.pythonhosted.org/packages/7f/f7/48b8b09fbf6e368925a186ef4cb874ae0abfae6d5b81bd2656502290add5/moleculekit-0.1.24.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.24
2024-04-19T11:38:14,718   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/1e/bd/24146e575547d1fc8bd24b4b7d9a57cbe14c357ebf85d638df6421412465/moleculekit-0.1.26-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,719   Found link https://files.pythonhosted.org/packages/f5/6e/a9dafd4b3b109011d156a6f7c726925669e42435b6049859f3a0a050a87f/moleculekit-0.1.26.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.26
2024-04-19T11:38:14,719   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/fe/63/a0e65b18866805186e3a4ba2b8ece20b73b85ec1ce6b3f8597e0c2508178/moleculekit-0.1.27-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,720   Found link https://files.pythonhosted.org/packages/70/7e/a01a54d9e88eaf00ec47989f360fb98d58e871d500aa28c44b9c7b8bd7ff/moleculekit-0.1.27.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.27
2024-04-19T11:38:14,721   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/f1/db/8f0879b07acae5356393297640e1116c459d28b59d19e1bd328da94e4b7a/moleculekit-0.1.29-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,721   Found link https://files.pythonhosted.org/packages/dc/10/67c6720423554f257425330caf21342c13c59bc86aee634f369b481dad7b/moleculekit-0.1.29.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.29
2024-04-19T11:38:14,722   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/83/f1/2cb963c0a74d919761e8516fe969330c122c9874426ff8eef7834b9b0c62/moleculekit-0.1.30-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,723   Found link https://files.pythonhosted.org/packages/a9/87/cd070158b979d89c02edf2a1deb98ced11e6a442952ed67ebb4f281d6700/moleculekit-0.1.30.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.30
2024-04-19T11:38:14,723   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/cf/c4/f211cc80e281f1ee01040cfa490a65e874a54b5bedf2dfd73e3be6e72d93/moleculekit-0.1.31-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,724   Found link https://files.pythonhosted.org/packages/d7/8b/2b012f3371e5fceb875601e16c83a0ddfd5602d1cdceb953a4b36fc12200/moleculekit-0.1.31.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.31
2024-04-19T11:38:14,725   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/bf/2e/56178883cad4d2429d5cb5fb23d17be42663dea6da428df98f2b70be67a3/moleculekit-0.1.32-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,725   Found link https://files.pythonhosted.org/packages/97/34/992324fd9f1bb4d151b3383f601e3b69810e62c9d3530580ae8b43c4dcca/moleculekit-0.1.32.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.1.32
2024-04-19T11:38:14,726   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/7e/84/8e678afbcbd29c9b462973571bf3a043a7b5dbf7a98f1ac3dc82c3f5fc91/moleculekit-0.2.0-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,727   Found link https://files.pythonhosted.org/packages/10/f8/dfc9b84d16081239c0b6e3a2896e59db9f8b8617a67b7585e98789942324/moleculekit-0.2.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.0
2024-04-19T11:38:14,728   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/cb/a7/e706e1daa9d60d9ca9a96436564ec0612fe5fc850fdabad6e0c5174d52c5/moleculekit-0.2.1-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,728   Found link https://files.pythonhosted.org/packages/a8/ad/3c01c094324fcaf3a516aa3ab376ae4bec251dc2005f172217368e97b1db/moleculekit-0.2.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.1
2024-04-19T11:38:14,729   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/30/c3/e618404cdeb463f4f5f8fbfa1d5d45a81ea3c31cef86e9c6ca14a3d64589/moleculekit-0.2.2-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,729   Found link https://files.pythonhosted.org/packages/ce/2a/e4f0ea22c4e3be055409fbe8cda7802bd2cd1095926f62f2c78b7f447b46/moleculekit-0.2.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.2
2024-04-19T11:38:14,730   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/3c/c6/baf4c6dafa42a7f055cd29cad8a79b2e99baaf474e8ddcff833e02a8c9a2/moleculekit-0.2.3-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,730   Found link https://files.pythonhosted.org/packages/92/3b/d42fa900fbc359ad0b7806344c2eb303f06336fc6bad439db5550483ce5c/moleculekit-0.2.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.3
2024-04-19T11:38:14,731   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/d7/72/5674ef2a697583774eb66559f23b37026098badcc7e14bb09247c112baec/moleculekit-0.2.4-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,732   Found link https://files.pythonhosted.org/packages/7c/f3/5372063ddc10f57f1ea1aa29ab3f06d98d3d29c22d2a3d0c7c318ff7dc4a/moleculekit-0.2.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.4
2024-04-19T11:38:14,732   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/35/99/9bc21e28d9d4007623055b30fc43d18464649dfa39703ea80e9c32ba4607/moleculekit-0.2.5-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,733   Found link https://files.pythonhosted.org/packages/dd/7a/f6d8ac771d9e4c9117ab098a281231e6c4c3fadbbeafce69ac5b8370f2bd/moleculekit-0.2.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.5
2024-04-19T11:38:14,734   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/97/2d/1b5aeecf49f225f13c39534c7a93181f14bbb295f4b0bb50019d7efda717/moleculekit-0.2.6-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,734   Found link https://files.pythonhosted.org/packages/8a/04/f032c25621eac9ccab21dd25c0cb5d7150a21a5b0cde5ae21adb3e2be933/moleculekit-0.2.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.6
2024-04-19T11:38:14,735   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/7b/c3/6023b75cb8d60607d1932a6f3fa1fee5c99e88b692f25e3ed0072a4812a5/moleculekit-0.2.7-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,736   Found link https://files.pythonhosted.org/packages/a6/68/1eb4fb904763839ec4df4eab490702bd7245a6848ebfb693b165d5fbb153/moleculekit-0.2.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.7
2024-04-19T11:38:14,736   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/a3/85/452591c89b66659eaf24e216aef7818e3061a78bb1fc832f8616808949d4/moleculekit-0.2.8-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,737   Found link https://files.pythonhosted.org/packages/68/e0/0fe1302790061ea9e59370a988d67b877642c45a9e6d725819118cc3aae1/moleculekit-0.2.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.8
2024-04-19T11:38:14,738   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/90/90/238209bf8023d0779c0d4a9592786cc94e69d3dde60b5b17473d57c97b60/moleculekit-0.2.9-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,739   Found link https://files.pythonhosted.org/packages/bd/ad/aa7f2c7343506e17f61f2c4223dc912d4f099fdcc3e1736f393c9c31e118/moleculekit-0.2.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.2.9
2024-04-19T11:38:14,740   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/40/39/e7c3ea68289cf49ac58a53a55de11c71471a26c55268ce2a11dd3d0f4b1d/moleculekit-0.3.0-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,740   Found link https://files.pythonhosted.org/packages/9d/1e/99ffa0d73766a735c3e91d591c92537e37b0024cd9b1d745c4e5933563c1/moleculekit-0.3.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.3.0
2024-04-19T11:38:14,741   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/0e/6f/a11697b46e26552b60513aad11c1862ea314d1628ed83b3d1ea7cb552d51/moleculekit-0.3.1-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,741   Found link https://files.pythonhosted.org/packages/13/f9/af3d7677c2eb61bb310ddad301ab47b9c1db2f923b0efad9ce605112aafb/moleculekit-0.3.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.3.1
2024-04-19T11:38:14,742   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/eb/72/b091a120100302ee0b23d184377c59cbc0a7ba597225f90328ce36f00504/moleculekit-0.3.2-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,742   Found link https://files.pythonhosted.org/packages/0d/3f/7743a3ec8c6ed58c5f0c12bf19654ba6275d473044861d9479ff346f8859/moleculekit-0.3.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.3.2
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2024-04-19T11:38:14,743   Found link https://files.pythonhosted.org/packages/a1/bf/2b3762bf7738dd1850a06eb6330cd8d17c49acaa272d43fc80c7c9c44a04/moleculekit-0.3.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.3.3
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2024-04-19T11:38:14,745   Found link https://files.pythonhosted.org/packages/7e/e0/d4abeaf42102abf8d132168518d29b8fec430608a3bb484a3254b63e9d37/moleculekit-0.3.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.3.4
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2024-04-19T11:38:14,746   Found link https://files.pythonhosted.org/packages/18/8a/a376ec94bd0c414528774a510846e3a34afec6356cda3d31d3a044a74a15/moleculekit-0.3.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.3.5
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2024-04-19T11:38:14,748   Found link https://files.pythonhosted.org/packages/29/c4/2af9ce826d6a8d2327401dd1a05b3beff8e1f96911d0e334db20410975ee/moleculekit-0.3.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.3.7
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2024-04-19T11:38:14,749   Found link https://files.pythonhosted.org/packages/b0/8f/652d19d5bd69898632ed95d0a37095d2a1ed754d4147d20e1076d0b88e87/moleculekit-0.3.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.3.8
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2024-04-19T11:38:14,750   Found link https://files.pythonhosted.org/packages/ac/14/2cef434c3bdc911ca4e7aabce48b50f869cf8f829f24958037f9dbb6521e/moleculekit-0.3.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.3.9
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2024-04-19T11:38:14,751   Found link https://files.pythonhosted.org/packages/67/47/5f9440683e69c1612d117c957044f665b4e025bffab93251e31444529fa6/moleculekit-0.4.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.4.0
2024-04-19T11:38:14,752   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/45/48/d6f7e3ff07d4e04aced25dc1e28790e8d1d2aa95ccd0db0f0043e354f0de/moleculekit-0.4.2-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,752   Found link https://files.pythonhosted.org/packages/5c/8c/e37b37f907a6d009fbc458764ab561b9fe758cf0e0d349b7d19908820ab1/moleculekit-0.4.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.4.2
2024-04-19T11:38:14,753   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/ed/8c/cf4a2f026f7b867bcc33cfac6c1fede5ee244c962112f0dc245fcac0939b/moleculekit-0.4.3-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,754   Found link https://files.pythonhosted.org/packages/40/e2/a9ce14fedc2bf7c9b1678a21e860878b5ea4f37b9820ef299ccc70634094/moleculekit-0.4.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.4.3
2024-04-19T11:38:14,754   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/4b/f0/8b8df48948c27171f2db632801a49bd08f3f222d1c6e69abc9281962eb29/moleculekit-0.4.4-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,755   Found link https://files.pythonhosted.org/packages/a4/6d/cdf319e5cf1cbe68e02ce15c36001cf739b9ca932fcafa2bff354c581560/moleculekit-0.4.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.4.4
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2024-04-19T11:38:14,756   Found link https://files.pythonhosted.org/packages/8f/22/90193aaf5014419463425cf48b2857ffb08d1a85df3af6407f370ea39358/moleculekit-0.4.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.4.6
2024-04-19T11:38:14,757   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/24/38/72e6ecc3ee5ad4463161bfbba8c4ee06716a2d393eee3dfcbecfc6566ad4/moleculekit-0.4.7-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,758   Found link https://files.pythonhosted.org/packages/eb/7f/e4e084eaf2a6e4af0d1ce91c0b210836fc244592155000f92383528d20e4/moleculekit-0.4.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.4.7
2024-04-19T11:38:14,758   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/3f/a5/68b5af554f766d3dceef94275a75af28358200e0f741a86d38db878c60e1/moleculekit-0.4.8-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,759   Found link https://files.pythonhosted.org/packages/e1/2c/f4b752620b3f00be07e0f661bb3364e220e8b26bb0ce59e95aab7809b0a8/moleculekit-0.4.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.4.8
2024-04-19T11:38:14,760   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/5c/75/2a9151eb7a9fbbd8b36c5283452449e596f081188d25c07f33a176783e8e/moleculekit-0.5.2-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,760   Found link https://files.pythonhosted.org/packages/31/e6/a052ad91265d7e72fcf32d9335d746bba3c06b23fc5a163960bd36e6dde6/moleculekit-0.5.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.5.2
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2024-04-19T11:38:14,762   Found link https://files.pythonhosted.org/packages/16/e8/a60ecf23c91f1248aaeca4c5a3aacb14887fa3785e061ab5e225e06d7de3/moleculekit-0.5.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.5.3
2024-04-19T11:38:14,762   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/11/34/1eef198a596de2bbe11b5d156183d4e8853296cee4f6eccb1e93f1acfe6b/moleculekit-0.5.4-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,763   Found link https://files.pythonhosted.org/packages/b1/30/da12019468d39b9fc72b300f6bc0cbc4045ad8ccc1b8f25aa9fb7dced289/moleculekit-0.5.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.5.4
2024-04-19T11:38:14,763   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/c2/ae/6dcb36295ba009458f4ac17d3099f65f30ef7b52ee289ce857eaa09901e9/moleculekit-0.5.5-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,764   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/5e/49/34aa32d017a3ff0c43e9743813fb882a1b2f4721a6429a14d3974d30b013/moleculekit-0.5.6-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,765   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/3a/53/7ae8cc33411c0f5f83d245abfeabfd81ed123a3cfbf8a500ec4d96648275/moleculekit-0.5.7-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,765   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/33/cb/c92c01bcbe6721a0de0efc2a6000170f30941c58471578d25966f935c655/moleculekit-0.5.8-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,766   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/13/6a/e73e6d343e35473a200e0744ab09efaa39adeebbbe191f752bc23d7a9b3a/moleculekit-0.5.9-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
2024-04-19T11:38:14,766   Skipping link: No binaries permitted for moleculekit: https://files.pythonhosted.org/packages/ee/29/022155d624fde59e89cecd4a7f95e2a183d3ec0a12251cf730661ae38179/moleculekit-0.6.0-py3-none-any.whl (from https://pypi.org/simple/moleculekit/)
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2024-04-19T11:38:14,770   Found link https://files.pythonhosted.org/packages/ab/f4/62f8b76e0a25ee6b464bdbc1091fcd00f7a573f812621a25dd317ba75abc/moleculekit-0.6.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.6.8
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2024-04-19T11:38:14,786   Found link https://files.pythonhosted.org/packages/b9/00/f8d458320556166424a904edf41546e5d55d31743c27c8f63467f607ac62/moleculekit-0.9.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.5
2024-04-19T11:38:14,787   Found link https://files.pythonhosted.org/packages/c7/e6/72a4be7c3db86704ca264e68de620327a6c292f01b2fb9a9a186e0909622/moleculekit-0.9.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.6
2024-04-19T11:38:14,788   Found link https://files.pythonhosted.org/packages/5c/b2/944d529319db190e13234dd2337bff23b7a7c3c1a98b2a95eb08fc802530/moleculekit-0.9.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.7
2024-04-19T11:38:14,788   Found link https://files.pythonhosted.org/packages/42/0a/fbfa3d5c838ad716fdcb9b5ad55bddb6dccd74c5c281ac171be93b0f58e2/moleculekit-0.9.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.8
2024-04-19T11:38:14,789   Found link https://files.pythonhosted.org/packages/15/e0/93b4cc5e997a9e4e01fd39f00548f04e3f068961abba30f82fc04aa828ac/moleculekit-0.9.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.9
2024-04-19T11:38:14,790   Found link https://files.pythonhosted.org/packages/7f/58/2f04c5387c3c23e5c46f71741f7655c380b01c6f88aad7b5e945943c3fd1/moleculekit-0.9.12.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.12
2024-04-19T11:38:14,791   Found link https://files.pythonhosted.org/packages/b5/7c/fde4b7b8c9cd6683036e87727f341a0c9de5dae09f324dfa1bc2aa2a6de0/moleculekit-0.9.13.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.13
2024-04-19T11:38:14,791   Found link https://files.pythonhosted.org/packages/8e/f7/39a1290893da55d759e629ea6d9e2509fe6c3a06538d3f80cca590859647/moleculekit-0.9.14.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.14
2024-04-19T11:38:14,792   Found link https://files.pythonhosted.org/packages/02/6e/108b002ecb68c789d690492a02ced311cea625fdd642348e5cd75bd25fdb/moleculekit-0.9.15.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.9.15
2024-04-19T11:38:14,793   Found link https://files.pythonhosted.org/packages/62/51/f195a9d66dab99b8f6bd30fe5f65f63c65e65ded97c8fd20bf0cda822ee1/moleculekit-0.10.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 0.10.0
2024-04-19T11:38:14,793   Found link https://files.pythonhosted.org/packages/19/73/98bfd38e7d5823dc1d21ca3557d9f599b09926d252b22e215688677fe1eb/moleculekit-1.0.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.0
2024-04-19T11:38:14,794   Found link https://files.pythonhosted.org/packages/fc/d7/f3aa2dd40f165c1b67401587414deb33e80764835dfe2abb16b9b1d167bf/moleculekit-1.0.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.1
2024-04-19T11:38:14,795   Found link https://files.pythonhosted.org/packages/19/54/5ec72761331cfeea3e48a65f0dc30f7c21ec586f6d2b904339c262abafd8/moleculekit-1.0.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.2
2024-04-19T11:38:14,796   Found link https://files.pythonhosted.org/packages/f9/12/d8febc3aa79b72ffa0ea8efb978370f58db848fba030df47ae546bccb298/moleculekit-1.0.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.3
2024-04-19T11:38:14,796   Found link https://files.pythonhosted.org/packages/07/ab/e6c8a654329cb5fc7cf2d91d47934a6f53ec8b34276e96128f9961147a6a/moleculekit-1.0.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.4
2024-04-19T11:38:14,797   Found link https://files.pythonhosted.org/packages/d3/02/1e965b08593af843878d5bc3f7cc49cf61d4c9ca3a1e07e796923fbdb65e/moleculekit-1.0.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.5
2024-04-19T11:38:14,797   Found link https://files.pythonhosted.org/packages/28/2f/61d6e171e7b0309a94b3920b2743e5b6990d24a4870a5b1caf39f0e34338/moleculekit-1.0.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.6
2024-04-19T11:38:14,798   Found link https://files.pythonhosted.org/packages/6d/1e/bbd2d882b353e673f44897179ab0b6e76df9c2a657d25d47090dbdce76d3/moleculekit-1.0.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.7
2024-04-19T11:38:14,798   Found link https://files.pythonhosted.org/packages/61/45/acbe2272378c87f0796b1ebcba0673a13acc5ed87eb0d29fa16e1bfe54cf/moleculekit-1.0.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.8
2024-04-19T11:38:14,799   Found link https://files.pythonhosted.org/packages/72/48/3df4bcf3a3e5ca9c0e05e5486c0a7da3b7d6b3ff49830d473b6e72f02443/moleculekit-1.0.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.0.9
2024-04-19T11:38:14,800   Found link https://files.pythonhosted.org/packages/09/29/7e58bdf57dda487be8ab4c3719ebbf31db17ad65232fc9305a20eaa3c90c/moleculekit-1.1.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.0
2024-04-19T11:38:14,801   Found link https://files.pythonhosted.org/packages/3c/b6/64b6ae76e4b562d453b31fd28678232838949d56f1dafabd12531362de23/moleculekit-1.1.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.1
2024-04-19T11:38:14,801   Found link https://files.pythonhosted.org/packages/15/f8/fb94ef622b57eea44916cbed8a838efcbbd62c9732879ec4864c3abaf3d0/moleculekit-1.1.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.2
2024-04-19T11:38:14,802   Found link https://files.pythonhosted.org/packages/85/87/2264a91838fc8d44f1661b9ae462976e2b9b23f002591db7be9287f51d43/moleculekit-1.1.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.4
2024-04-19T11:38:14,803   Found link https://files.pythonhosted.org/packages/f4/53/156ee257b5781f55228ef884eec2b57cc368dbf37c4654315347af0e7a71/moleculekit-1.1.6.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.6
2024-04-19T11:38:14,804   Found link https://files.pythonhosted.org/packages/71/3c/15df00803c890b9d17390a31c60fa2c070a88e8a8c33c79ef10ddf023159/moleculekit-1.1.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.7
2024-04-19T11:38:14,804   Found link https://files.pythonhosted.org/packages/eb/2e/c50f42aefc5f3510073bd5059723baff738a5ee171174441586000c444dc/moleculekit-1.1.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.8
2024-04-19T11:38:14,805   Found link https://files.pythonhosted.org/packages/59/b9/6e9913fc67fa6321d5c441eb59a93e257f1fba383848a6bd645a7d427045/moleculekit-1.1.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.1.9
2024-04-19T11:38:14,806   Found link https://files.pythonhosted.org/packages/06/90/69685dad023515e231d8da7747793f33c497bb62496c4075e518f230da55/moleculekit-1.2.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.0
2024-04-19T11:38:14,807   Found link https://files.pythonhosted.org/packages/1a/07/36426e9820ea0ecff884e15fc9ebe413735a2b22a9212cdcbb9b62e56744/moleculekit-1.2.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.1
2024-04-19T11:38:14,807   Found link https://files.pythonhosted.org/packages/a1/56/2e1ac2fac4f566abf327baf326d17421047e363138c1c132a537a3eaf5ec/moleculekit-1.2.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.2
2024-04-19T11:38:14,808   Found link https://files.pythonhosted.org/packages/cb/28/b8fa8b94edf207d206627fcb18753ce3fad1450d7d5e5b052daa211b226b/moleculekit-1.2.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.4
2024-04-19T11:38:14,808   Found link https://files.pythonhosted.org/packages/cb/c9/8d7c9c427863a8e1be9e5487520f26a4ea63a34e735a3c5598f1e8b43cb4/moleculekit-1.2.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.5
2024-04-19T11:38:14,809   Found link https://files.pythonhosted.org/packages/39/b3/50e46e2780075c4adf93bba603ad047457f3d9cd70a77f4909776ec446b3/moleculekit-1.2.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.7
2024-04-19T11:38:14,809   Found link https://files.pythonhosted.org/packages/29/f1/10cd916b3024b2efe08c06413dff5938859e01c8bc671cde8bf070758031/moleculekit-1.2.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.8
2024-04-19T11:38:14,810   Found link https://files.pythonhosted.org/packages/47/55/207179562e46a3cba4a1cb813c1754be6c5a1664a11d1dcffe89b51c1ca4/moleculekit-1.2.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.2.9
2024-04-19T11:38:14,811   Found link https://files.pythonhosted.org/packages/2e/1c/a07b4d5f471fc90ba12e88e44675ddbf0ba4b0a658c2fc014491a7a27092/moleculekit-1.3.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.0
2024-04-19T11:38:14,812   Found link https://files.pythonhosted.org/packages/80/9b/d0375ea58246506494224acf560e8d2da623d1635047089316a01ab146a0/moleculekit-1.3.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.1
2024-04-19T11:38:14,816   Found link https://files.pythonhosted.org/packages/f9/f6/5808fddfaeeb3c021514c45f1b896329245c2e1c6218a86b9bc9f1904d7d/moleculekit-1.3.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.3
2024-04-19T11:38:14,816   Found link https://files.pythonhosted.org/packages/0f/87/45be2661273532639b9aef46f7335ef962ac0f4d5a022cad9fae46b3ed76/moleculekit-1.3.4.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.4
2024-04-19T11:38:14,817   Found link https://files.pythonhosted.org/packages/0b/c2/d5b36c664c2d4f8736b5dbf06b05d9efeeacd4d488125c8feb0e4efb3594/moleculekit-1.3.5.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.5
2024-04-19T11:38:14,818   Found link https://files.pythonhosted.org/packages/30/3d/7f0577f2f4fd87df9160c6c80c49fe7d025f40b9f25c6b6d9ed0bcd2341f/moleculekit-1.3.7.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.7
2024-04-19T11:38:14,819   Found link https://files.pythonhosted.org/packages/1a/fd/3788664397288c8169d713da13ae2419a0534a9ee826d1ce718811e27569/moleculekit-1.3.8.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.8
2024-04-19T11:38:14,819   Found link https://files.pythonhosted.org/packages/fe/a6/b9b3e9ec27de783731911f111354a9d1e6cd766e47aeff934b769a415311/moleculekit-1.3.9.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.3.9
2024-04-19T11:38:14,820   Found link https://files.pythonhosted.org/packages/fd/8d/5420b8fc8713c9a27e74eb85aab9b758169f739c0d6aca1540d73582aba6/moleculekit-1.4.0.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.4.0
2024-04-19T11:38:14,821   Found link https://files.pythonhosted.org/packages/68/7e/cd023ea3b0a765a65611a8b103d51dbb55fc97bb9df335095d520ad46deb/moleculekit-1.4.1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.4.1
2024-04-19T11:38:14,821   Found link https://files.pythonhosted.org/packages/21/ce/d98ddf9106565632f876b1b853bb23c64534e65884b9d3d73208c7fe17e6/moleculekit-1.4.2.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.4.2
2024-04-19T11:38:14,822   Found link https://files.pythonhosted.org/packages/f9/12/68450058da1b4f39328ce41f22cfb5a38717147b3e624cb76b225318dd96/moleculekit-1.4.3.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.4.3
2024-04-19T11:38:14,823   Found link https://files.pythonhosted.org/packages/a1/9c/61a877e38393372a16746096dc836e3a24d0fe31240644258396f6ec1dd5/moleculekit-1.4.5-1.tar.gz (from https://pypi.org/simple/moleculekit/), version: 1.4.5-1
2024-04-19T11:38:14,824   Found link https://files.pythonhosted.org/packages/65/2b/f8fbac2b196d899066e4d26b78e62adc1f2356734b3de63da153e9b18e44/moleculekit-1.4.6.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.4.6
2024-04-19T11:38:14,825   Found link https://files.pythonhosted.org/packages/6b/80/69b1d49f78060edafdb9a5e49080f189c6d72a7a2a83f2567f7abfaf9fcb/moleculekit-1.4.7.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.4.7
2024-04-19T11:38:14,826   Found link https://files.pythonhosted.org/packages/91/bd/4e692bc271e6a957732a20347e43f0388e12ab60df6717a178b628f18fce/moleculekit-1.4.8.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.4.8
2024-04-19T11:38:14,826   Found link https://files.pythonhosted.org/packages/0b/22/49372d8ecca8baa50e08ca3971786e207825556920bd5b19697d085bf681/moleculekit-1.4.9.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.4.9
2024-04-19T11:38:14,827   Found link https://files.pythonhosted.org/packages/3a/52/c87b6f8651063e38a723e8506788475ecf32f2b2e67fcf42739e8737f120/moleculekit-1.5.0.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.0
2024-04-19T11:38:14,828   Found link https://files.pythonhosted.org/packages/e9/64/50b82745c79e8f28fb8c1615e637221dceb4af565af8e785b04b5c9bd7f0/moleculekit-1.5.1.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.1
2024-04-19T11:38:14,829   Found link https://files.pythonhosted.org/packages/3d/18/e249854f20e449b9890eca08ef37ccdb87f719b6ac0db8e9d2ca9c4eb890/moleculekit-1.5.2.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.2
2024-04-19T11:38:14,830   Found link https://files.pythonhosted.org/packages/3f/e8/860f3b89afd29b5ba405ab028f3d49ac22e95557b6b906e475c2f6558df5/moleculekit-1.5.3.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.3
2024-04-19T11:38:14,832   Found link https://files.pythonhosted.org/packages/e7/1e/8f982d3446852e3778250fc8af491eb3ceaf081b891eb7a4936776dfe730/moleculekit-1.5.4.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.4
2024-04-19T11:38:14,833   Found link https://files.pythonhosted.org/packages/46/81/f7be4e086eb469d0fda5d9be51c6fe2107d39c4127f64218774c40f5923a/moleculekit-1.5.5.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.5
2024-04-19T11:38:14,834   Found link https://files.pythonhosted.org/packages/d1/99/5866f661f25b1168804a5c26ab38edd26a7239d91b84c13fb129c1f84ab6/moleculekit-1.5.6.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.6
2024-04-19T11:38:14,834   Found link https://files.pythonhosted.org/packages/25/45/e228ef66e7b03b1613382490f07c3db31c9713e3878eb9766781076b8209/moleculekit-1.5.7.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.7
2024-04-19T11:38:14,835   Found link https://files.pythonhosted.org/packages/5e/4a/8e20ee9556cfcdc8c51aac44a054b76db1b9abf8c83124f51521397f7673/moleculekit-1.5.8.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.5.8
2024-04-19T11:38:14,836   Found link https://files.pythonhosted.org/packages/00/79/eafaf1a45594ebe0f5e3e3a775bb8e4635dd46e63a048cc577a4e3c4c29b/moleculekit-1.6.0.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.0
2024-04-19T11:38:14,837   Found link https://files.pythonhosted.org/packages/c2/66/b802cbaa73639d3fb24d7aca0a21b932bd6b781103c3aa0662fd27dd64e0/moleculekit-1.6.1.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.1
2024-04-19T11:38:14,839   Found link https://files.pythonhosted.org/packages/01/31/1debf4b7c89e0060dc1f7d19ab348e627b9183890a8e443c1ee54ee3bd6c/moleculekit-1.6.4.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.4
2024-04-19T11:38:14,840   Found link https://files.pythonhosted.org/packages/d6/3a/77427acaba2c2b4670a4b94ce5cd161b60ac547e812a6337374265f3272d/moleculekit-1.6.5.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.5
2024-04-19T11:38:14,840   Found link https://files.pythonhosted.org/packages/75/c9/3ed46001d1cc28d02ee2ee30de3377bc39f9545ea0a7b7932b6c31770879/moleculekit-1.6.6.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.6
2024-04-19T11:38:14,841   Found link https://files.pythonhosted.org/packages/b0/eb/47f199ab494f4a3929e1265222e24dcfce4dc2dde54923d1be8e513bf765/moleculekit-1.6.7.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.7
2024-04-19T11:38:14,842   Found link https://files.pythonhosted.org/packages/02/62/8710bf8c331f6c5d3320bcd99ce1f53fd72c8ed39767e69fe09127926c58/moleculekit-1.6.8.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.8
2024-04-19T11:38:14,843   Found link https://files.pythonhosted.org/packages/bd/54/7eaec59ff225b186934cbe0ea2e709af1864cac674dc9c8f2e7cf2d8adeb/moleculekit-1.6.9.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.6.9
2024-04-19T11:38:14,844   Found link https://files.pythonhosted.org/packages/3d/e9/5d17d4e81b5894b9ace33d43b373881813b8a68b0a1365d7590990c5c370/moleculekit-1.7.0.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.0
2024-04-19T11:38:14,845   Found link https://files.pythonhosted.org/packages/4e/3a/29fb1aa0e3792fef88348885348370f39af453fb75d5505a208068d1c4ac/moleculekit-1.7.1.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.1
2024-04-19T11:38:14,846   Found link https://files.pythonhosted.org/packages/4a/13/dd6711d592d27e604c48830300f5596aafa1bbc479dc5eb49ed9797085eb/moleculekit-1.7.2.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.2
2024-04-19T11:38:14,847   Found link https://files.pythonhosted.org/packages/c7/cb/205d8925276863e2892c2c1ae2747cd4834cd3f174521172670ce43b50b8/moleculekit-1.7.3.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.3
2024-04-19T11:38:14,848   Found link https://files.pythonhosted.org/packages/6f/9e/2bce5993679a3666fd12803b93bb9a4daa59922f0ecdd26e9726df5d7f73/moleculekit-1.7.4.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.4
2024-04-19T11:38:14,849   Found link https://files.pythonhosted.org/packages/fa/63/993d55964a5afc9417ca31ab06a7d08f10b8fb38c63157bef0f350b4bb49/moleculekit-1.7.6.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.6
2024-04-19T11:38:14,850   Found link https://files.pythonhosted.org/packages/9b/3d/351d6444550ae455f20139e1d71ab138449c75b4a9782ac831dc9c6daa76/moleculekit-1.7.7.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.7
2024-04-19T11:38:14,851   Found link https://files.pythonhosted.org/packages/1b/7a/80d740239c506d7eea7cdba7576c503012556338861c10d5d2908e1912f7/moleculekit-1.7.8.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.8
2024-04-19T11:38:14,852   Found link https://files.pythonhosted.org/packages/05/e0/64dd3801f9b9cd011f8093d85201df3b259bab3502b87b6e37edadea0f21/moleculekit-1.7.9.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.9
2024-04-19T11:38:14,853   Found link https://files.pythonhosted.org/packages/0e/fd/650680f6dcf164b179c8a334c56fc7ba97d71519330f03bdc485307b6a0d/moleculekit-1.7.10.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.10
2024-04-19T11:38:14,854   Found link https://files.pythonhosted.org/packages/37/05/3105db0d4a63b49d0f4534b5e9d6a488b96b83b3aac621224338f3a6aa6b/moleculekit-1.7.12.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.12
2024-04-19T11:38:14,855   Found link https://files.pythonhosted.org/packages/08/ec/48d8122fea93c59592ae22dc29f16496087cdf31064793e6da173fcf2e36/moleculekit-1.7.13.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.13
2024-04-19T11:38:14,856   Found link https://files.pythonhosted.org/packages/46/79/442f4846c44e99a4e5d61b09e65cb57ec69b24ae4bf7e8b704f125238c6c/moleculekit-1.7.14.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.14
2024-04-19T11:38:14,857   Found link https://files.pythonhosted.org/packages/fa/fd/aa5c1911df4cf3bee9575fbc1cdbd39bcb1d9164e77c772fa938be672cc0/moleculekit-1.7.15.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.15
2024-04-19T11:38:14,858   Found link https://files.pythonhosted.org/packages/38/fe/74b265e75deb09844035690d506614163cd262a2d6bc7c83b4e2f28d4bb9/moleculekit-1.7.16.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.16
2024-04-19T11:38:14,858   Found link https://files.pythonhosted.org/packages/8b/2f/56c308933a9652bc40c41a53d57509ef38cc3c21d55b6f5570c2d9a865ed/moleculekit-1.7.17.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.7.17
2024-04-19T11:38:14,859   Found link https://files.pythonhosted.org/packages/96/a3/11b655506ce842ebea0b6d4c86883a538095687cb7bc9c4a179420971bd7/moleculekit-1.8.1.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.1
2024-04-19T11:38:14,860   Found link https://files.pythonhosted.org/packages/9d/d3/ead35117c0f3b3b1be847d561ff31bf59dfde0c49982bff106a3cc3876f0/moleculekit-1.8.2.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.2
2024-04-19T11:38:14,861   Found link https://files.pythonhosted.org/packages/23/e8/3ebe2bfb667296b1c79d4e59fdfb487116bfd8bec579ca242eec7ecad0c2/moleculekit-1.8.3.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.3
2024-04-19T11:38:14,862   Found link https://files.pythonhosted.org/packages/6f/4d/4a0e90a65d79829ae0bec8d857de2f8b7e18b6d60e05daa99cdbed0061c0/moleculekit-1.8.4.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.4
2024-04-19T11:38:14,863   Found link https://files.pythonhosted.org/packages/15/bb/f88884d7710aeb6290c69f180df912ce73beb4975ceea9f58aa28250737c/moleculekit-1.8.5.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.5
2024-04-19T11:38:14,864   Found link https://files.pythonhosted.org/packages/e4/a8/ef9f25e6e42436ceaecfd8bb0aadbf40855976374a46b8cf8d55000fa0a8/moleculekit-1.8.6.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.6
2024-04-19T11:38:14,865   Found link https://files.pythonhosted.org/packages/67/c5/ed682f5ea9a16915b98612e0b274b50303bb912ccb71ab106247e01be8c2/moleculekit-1.8.7.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.7
2024-04-19T11:38:14,866   Found link https://files.pythonhosted.org/packages/23/cd/efd06d75f4a0e866e23156ca3c771c99a22bcfb5f2d1b0f42f853b9cfd27/moleculekit-1.8.10.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.10
2024-04-19T11:38:14,867   Found link https://files.pythonhosted.org/packages/d2/1a/935247798d3097c5093e33b026729b2e218fefd40f58c4b8b8bd3fcf93b4/moleculekit-1.8.13.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.13
2024-04-19T11:38:14,868   Found link https://files.pythonhosted.org/packages/b0/1c/de17759f3cbae5b6b06b60242724a93570b332f657fdeff9e582b6bda391/moleculekit-1.8.14.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.14
2024-04-19T11:38:14,869   Found link https://files.pythonhosted.org/packages/20/a3/7476dceb769dd7bb318d84590a372f1974e978cefb204da16f2b4d99a34e/moleculekit-1.8.15.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.15
2024-04-19T11:38:14,870   Found link https://files.pythonhosted.org/packages/ce/8d/e060616d8e4e03f56d544939f3ccea7f3d665038a66bbf57ba0bcd1f4711/moleculekit-1.8.17.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.17
2024-04-19T11:38:14,871   Found link https://files.pythonhosted.org/packages/36/66/5b4a8da5461b4547e9b3e58f477ddf359701865a7e2ca5b0348fa20f54ae/moleculekit-1.8.18.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.18
2024-04-19T11:38:14,872   Found link https://files.pythonhosted.org/packages/51/33/5a8b10a29ca3c7a893f4a727341611121bc5ec9e2e0004e0c0d4748e33f7/moleculekit-1.8.19.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.19
2024-04-19T11:38:14,873   Found link https://files.pythonhosted.org/packages/0c/02/8cb68afa12c5dac1a7e486d39e9017883f51e17c4fd781898edf79cd2f00/moleculekit-1.8.20.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.20
2024-04-19T11:38:14,874   Found link https://files.pythonhosted.org/packages/65/3f/75e14ea7f71098018974144579774255fc66d1b7f7dae2ff858a87aac1e7/moleculekit-1.8.21.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.21
2024-04-19T11:38:14,875   Found link https://files.pythonhosted.org/packages/2c/2f/d00d1cf86239c509fb4dce470fcaf771e332724034b7db1846332924366a/moleculekit-1.8.22.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.22
2024-04-19T11:38:14,876   Found link https://files.pythonhosted.org/packages/55/ad/3c392a8ef92f6437da30769f6b9770591c79b77604db9aa264d5c0291edf/moleculekit-1.8.23.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.23
2024-04-19T11:38:14,877   Found link https://files.pythonhosted.org/packages/64/72/c2549970c717c236688863287da25f453fbf8b3ea3dee071af9e96be6592/moleculekit-1.8.24.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.24
2024-04-19T11:38:14,878   Found link https://files.pythonhosted.org/packages/f2/d0/2c92a559a74562405f0628bc7880908412790a87c494c9b73e3962c7baa9/moleculekit-1.8.26.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.26
2024-04-19T11:38:14,879   Found link https://files.pythonhosted.org/packages/0e/be/42a9eff89e9e0c3bc08940ead6c991f366ce109bb75ece11cc3b2996d001/moleculekit-1.8.27.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.27
2024-04-19T11:38:14,880   Found link https://files.pythonhosted.org/packages/30/bd/5ed4ddd1b8934c0594027c765bab0013b8081e818e92c2a98462f64d4dcd/moleculekit-1.8.28.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.28
2024-04-19T11:38:14,881   Found link https://files.pythonhosted.org/packages/2a/f9/1d7fe1a09e04049ace7db33faf27c26478ba9674a3cb39d1115fcd1d0679/moleculekit-1.8.29.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.29
2024-04-19T11:38:14,882   Found link https://files.pythonhosted.org/packages/d6/e2/f7f2b1870c62092c3d84ac0055b50305611a1253142cb592babdfcbdb266/moleculekit-1.8.31.tar.gz (from https://pypi.org/simple/moleculekit/) (requires-python:>=3.8), version: 1.8.31
2024-04-19T11:38:14,883 Fetching project page and analyzing links: https://www.piwheels.org/simple/moleculekit/
2024-04-19T11:38:14,884 Getting page https://www.piwheels.org/simple/moleculekit/
2024-04-19T11:38:14,885 Found index url https://www.piwheels.org/simple/
2024-04-19T11:38:15,074 Fetched page https://www.piwheels.org/simple/moleculekit/ as text/html
2024-04-19T11:38:15,161   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.29-cp311-cp311-linux_armv6l.whl#sha256=ba84e1392124eb438846b78998fb0f26e8d9942c644dd5574f49d9eb9b0f6a87 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-04-19T11:38:15,161   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.29-cp311-cp311-linux_armv7l.whl#sha256=ba84e1392124eb438846b78998fb0f26e8d9942c644dd5574f49d9eb9b0f6a87 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-04-19T11:38:15,162   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.29-cp39-cp39-linux_armv6l.whl#sha256=44fb6340ac1ed849bf5c52a43b7b0334c3869777bcdec4444fc6ac0303a7d18b (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-04-19T11:38:15,162   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.29-cp39-cp39-linux_armv7l.whl#sha256=44fb6340ac1ed849bf5c52a43b7b0334c3869777bcdec4444fc6ac0303a7d18b (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-04-19T11:38:15,163   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.28-cp311-cp311-linux_armv6l.whl#sha256=0bd78844c5d2c1631992bbe75050af4b5c6a7c95431e8637867fb30717804582 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-04-19T11:38:15,163   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.28-cp311-cp311-linux_armv7l.whl#sha256=0bd78844c5d2c1631992bbe75050af4b5c6a7c95431e8637867fb30717804582 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-04-19T11:38:15,166   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.28-cp39-cp39-linux_armv6l.whl#sha256=04c1c3834e4447c5f50b16abf23b1e9f68e8e832712398c35671d844fbf2f35e (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-04-19T11:38:15,166   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.28-cp39-cp39-linux_armv7l.whl#sha256=04c1c3834e4447c5f50b16abf23b1e9f68e8e832712398c35671d844fbf2f35e (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-04-19T11:38:15,167   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.27-cp311-cp311-linux_armv6l.whl#sha256=8a573033f33f4f16ba75cf9a05329b6842b25a3947b5cfd1a5c439e7a837fa1a (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-04-19T11:38:15,168   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.27-cp311-cp311-linux_armv7l.whl#sha256=8a573033f33f4f16ba75cf9a05329b6842b25a3947b5cfd1a5c439e7a837fa1a (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-04-19T11:38:15,168   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.27-cp39-cp39-linux_armv6l.whl#sha256=0e7b2ee30b7a5ead76d5e0591629b4c746dd586ec0da5b68f13ab66169217a9a (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-04-19T11:38:15,169   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.27-cp39-cp39-linux_armv7l.whl#sha256=0e7b2ee30b7a5ead76d5e0591629b4c746dd586ec0da5b68f13ab66169217a9a (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-04-19T11:38:15,169   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.26-cp311-cp311-linux_armv6l.whl#sha256=49f97c74078233f9b9c45b8e685536e701ae768f527b1c4a6c6a09be4faa18e9 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-04-19T11:38:15,170   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.26-cp311-cp311-linux_armv7l.whl#sha256=49f97c74078233f9b9c45b8e685536e701ae768f527b1c4a6c6a09be4faa18e9 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-04-19T11:38:15,171   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.26-cp39-cp39-linux_armv6l.whl#sha256=383042586b9089491f7fb534cdbcab48294ebddbd0a60b4a87bd929a5a47d553 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-04-19T11:38:15,172   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.26-cp39-cp39-linux_armv7l.whl#sha256=383042586b9089491f7fb534cdbcab48294ebddbd0a60b4a87bd929a5a47d553 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-04-19T11:38:15,172   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.24-cp311-cp311-linux_armv6l.whl#sha256=4c7c0ad147877ad9858b28bbf91bac3c9c52fc1b86d17b5cbb395816826d5795 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-04-19T11:38:15,172   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.24-cp311-cp311-linux_armv7l.whl#sha256=4c7c0ad147877ad9858b28bbf91bac3c9c52fc1b86d17b5cbb395816826d5795 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-04-19T11:38:15,173   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.24-cp39-cp39-linux_armv6l.whl#sha256=fc16c6b9060deb49db4377faa53c9889cbab863b3abe9c4ed14a551a51d9cd2d (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-04-19T11:38:15,173   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.24-cp39-cp39-linux_armv7l.whl#sha256=fc16c6b9060deb49db4377faa53c9889cbab863b3abe9c4ed14a551a51d9cd2d (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
2024-04-19T11:38:15,174   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-1.8.23-cp311-cp311-linux_armv6l.whl#sha256=877765dd6aa49fb42e14a561a757833a39111f4f01238ad7b2d0297d4c4a48e5 (from https://www.piwheels.org/simple/moleculekit/) (requires-python:>=3.8)
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2024-04-19T11:38:15,274   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.14-cp37-cp37m-linux_armv7l.whl#sha256=5bc2de8230ca38d840e6f86860f469828a1720a95c76726db1ecb07a8af6de91 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,274   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.14-cp39-cp39-linux_armv6l.whl#sha256=9462e9f87eb4aec5ac63c9df15de09cdce7d94fe44a0708d7ee525e983ff1830 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,275   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.14-cp39-cp39-linux_armv7l.whl#sha256=9462e9f87eb4aec5ac63c9df15de09cdce7d94fe44a0708d7ee525e983ff1830 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,276   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.13-cp37-cp37m-linux_armv6l.whl#sha256=ef137737db23a1f54c74776c99ac718685db863975d888a3e219900b5874fe45 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,276   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.13-cp37-cp37m-linux_armv7l.whl#sha256=ef137737db23a1f54c74776c99ac718685db863975d888a3e219900b5874fe45 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,277   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.13-cp39-cp39-linux_armv6l.whl#sha256=413233b9ea619a276a0cc4911cee59417c2be694ab30c5c5c836a31391e5b6c4 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,278   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.13-cp39-cp39-linux_armv7l.whl#sha256=413233b9ea619a276a0cc4911cee59417c2be694ab30c5c5c836a31391e5b6c4 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,278   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.12-cp37-cp37m-linux_armv6l.whl#sha256=a871d3b206f986ddc16b14a1e59904384aea1d6936948be45d6d3d05211637c4 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,278   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.12-cp37-cp37m-linux_armv7l.whl#sha256=a871d3b206f986ddc16b14a1e59904384aea1d6936948be45d6d3d05211637c4 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,279   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.12-cp39-cp39-linux_armv6l.whl#sha256=d75d99aa397ece4f4d163fff8e78e6868ccbab4190016befc567c5f08d1cbbd4 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,279   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.12-cp39-cp39-linux_armv7l.whl#sha256=d75d99aa397ece4f4d163fff8e78e6868ccbab4190016befc567c5f08d1cbbd4 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,280   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.9-cp37-cp37m-linux_armv6l.whl#sha256=66dbff1fb6cecaa00851b6b78480b3d8eb3f5f5d9aae539ad9397ec3dc9b22d8 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,280   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.9-cp37-cp37m-linux_armv7l.whl#sha256=66dbff1fb6cecaa00851b6b78480b3d8eb3f5f5d9aae539ad9397ec3dc9b22d8 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,281   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.9-cp39-cp39-linux_armv6l.whl#sha256=0d0004615c5da8823417816aa8e72f2ac2a2993c01c9ffa07540521dd44cdeb9 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,282   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.9-cp39-cp39-linux_armv7l.whl#sha256=0d0004615c5da8823417816aa8e72f2ac2a2993c01c9ffa07540521dd44cdeb9 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,282   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.8-cp37-cp37m-linux_armv6l.whl#sha256=e8d8fc1d3f31a50afae4252a2c403fb5b928eff4452d3954322d0d9b2d5383c5 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,283   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.8-cp37-cp37m-linux_armv7l.whl#sha256=e8d8fc1d3f31a50afae4252a2c403fb5b928eff4452d3954322d0d9b2d5383c5 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,284   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.8-cp39-cp39-linux_armv6l.whl#sha256=72aada7099cf1c7fbed38107b64c08622659cb763f35e5f2b75052a08f5cb853 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,284   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.8-cp39-cp39-linux_armv7l.whl#sha256=72aada7099cf1c7fbed38107b64c08622659cb763f35e5f2b75052a08f5cb853 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,285   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp39-cp39-linux_armv6l.whl#sha256=b1bfb9de96ef11fdd768cccd1b894300c470a7389f83c8cca3f42ac636f3dcb7 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,285   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp39-cp39-linux_armv7l.whl#sha256=b1bfb9de96ef11fdd768cccd1b894300c470a7389f83c8cca3f42ac636f3dcb7 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,286   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp37-cp37m-linux_armv6l.whl#sha256=8e98ed7e4f43a05739fbb98f22bc0aeabe5d6a76673b8883a4fa88c3762ba080 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,286   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.7-cp37-cp37m-linux_armv7l.whl#sha256=8e98ed7e4f43a05739fbb98f22bc0aeabe5d6a76673b8883a4fa88c3762ba080 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,287   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp37-cp37m-linux_armv6l.whl#sha256=881a09b6497cca181f77a3388648b0ec90974f79d8c81513666ac38dbed69842 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,287   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp37-cp37m-linux_armv7l.whl#sha256=881a09b6497cca181f77a3388648b0ec90974f79d8c81513666ac38dbed69842 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,288   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp39-cp39-linux_armv6l.whl#sha256=de2e9946d86d3e6deb732605b7b9804d3ee229e0d1e869093c26731ff1cf6e49 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,289   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.6-cp39-cp39-linux_armv7l.whl#sha256=de2e9946d86d3e6deb732605b7b9804d3ee229e0d1e869093c26731ff1cf6e49 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,289   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp37-cp37m-linux_armv6l.whl#sha256=30013f87dd3dc0c9b99cc9862ac0d0be618fe63faa7c7c4623be9cdd86396624 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,290   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp37-cp37m-linux_armv7l.whl#sha256=30013f87dd3dc0c9b99cc9862ac0d0be618fe63faa7c7c4623be9cdd86396624 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,291   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp39-cp39-linux_armv6l.whl#sha256=f42eb6c315d3242355c8e36090f1f77ed92b768cefb595178e81eb89fa5a79d5 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,291   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.5-cp39-cp39-linux_armv7l.whl#sha256=f42eb6c315d3242355c8e36090f1f77ed92b768cefb595178e81eb89fa5a79d5 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,292   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp37-cp37m-linux_armv6l.whl#sha256=a30adf43b2972eb0763ce00b18dc4dffb61a74ac1da2391652cf53f73dba67ce (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,292   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp37-cp37m-linux_armv7l.whl#sha256=a30adf43b2972eb0763ce00b18dc4dffb61a74ac1da2391652cf53f73dba67ce (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,293   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp39-cp39-linux_armv6l.whl#sha256=e123a257574ee84a677c70d154c26fb75cdf29cfb3f9491b309d8ad47e37f3c0 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,294   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.4-cp39-cp39-linux_armv7l.whl#sha256=e123a257574ee84a677c70d154c26fb75cdf29cfb3f9491b309d8ad47e37f3c0 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,294   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp39-cp39-linux_armv6l.whl#sha256=c666ea91f79ecf6c6d99ca251e7f938e7e82208a01a91d39b827ba64eee4ce41 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,295   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp39-cp39-linux_armv7l.whl#sha256=c666ea91f79ecf6c6d99ca251e7f938e7e82208a01a91d39b827ba64eee4ce41 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,295   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp37-cp37m-linux_armv6l.whl#sha256=286faceca4683f35ce8e9aeefefdecee1c02150dfc9b7deb62015ce17f3f557c (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,296   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.3-cp37-cp37m-linux_armv7l.whl#sha256=286faceca4683f35ce8e9aeefefdecee1c02150dfc9b7deb62015ce17f3f557c (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,296   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp37-cp37m-linux_armv6l.whl#sha256=e7e709fde2552ca5cb602bf420ed89d740b1e75bd32c879ee33ffe3b747b109a (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,297   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp37-cp37m-linux_armv7l.whl#sha256=e7e709fde2552ca5cb602bf420ed89d740b1e75bd32c879ee33ffe3b747b109a (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,298   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp39-cp39-linux_armv6l.whl#sha256=390edc2399f77605c97d9fc8db3b63f282ba297c67fe9514db91ebec945fa2d7 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,298   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.2-cp39-cp39-linux_armv7l.whl#sha256=390edc2399f77605c97d9fc8db3b63f282ba297c67fe9514db91ebec945fa2d7 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,299   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp39-cp39-linux_armv6l.whl#sha256=aed227f0c49804421d71b6c949c0d24367a74207b8f855c59e4e73a89b5a93ed (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,299   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp39-cp39-linux_armv7l.whl#sha256=aed227f0c49804421d71b6c949c0d24367a74207b8f855c59e4e73a89b5a93ed (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,300   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp37-cp37m-linux_armv6l.whl#sha256=ad67f1f622d2a2a49358691e3e784e48277aa09cf1f984ed60e847892a3413d7 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,301   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.1-cp37-cp37m-linux_armv7l.whl#sha256=ad67f1f622d2a2a49358691e3e784e48277aa09cf1f984ed60e847892a3413d7 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,301   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp37-cp37m-linux_armv6l.whl#sha256=ab05d1bc06d0d249cbb4871d51e6dca4b9e8474288d86326bd7dd603b9b99820 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,302   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp37-cp37m-linux_armv7l.whl#sha256=ab05d1bc06d0d249cbb4871d51e6dca4b9e8474288d86326bd7dd603b9b99820 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,302   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp39-cp39-linux_armv6l.whl#sha256=7f76858d50e6bb4611f32f053be82003c583d01ad83aa44b6f220dce89a7856f (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,303   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.9.0-cp39-cp39-linux_armv7l.whl#sha256=7f76858d50e6bb4611f32f053be82003c583d01ad83aa44b6f220dce89a7856f (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,303   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp37-cp37m-linux_armv6l.whl#sha256=34809734c61c1fcc4c4de1857dadfb84e726cbfe0dd0b60fce249166d29a3bb2 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,304   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp37-cp37m-linux_armv7l.whl#sha256=34809734c61c1fcc4c4de1857dadfb84e726cbfe0dd0b60fce249166d29a3bb2 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,304   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp39-cp39-linux_armv6l.whl#sha256=0f20a256b92c66dbaac370cf1a01b885b10f1371beacaec65ec35ce8ac935afb (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,305   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.9-cp39-cp39-linux_armv7l.whl#sha256=0f20a256b92c66dbaac370cf1a01b885b10f1371beacaec65ec35ce8ac935afb (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,306   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp37-cp37m-linux_armv6l.whl#sha256=93f57ab9c01697fb9f28ed39e4c5c32828e862bf410f556fdbc43c7a72825cb2 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,306   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp37-cp37m-linux_armv7l.whl#sha256=93f57ab9c01697fb9f28ed39e4c5c32828e862bf410f556fdbc43c7a72825cb2 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,307   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp39-cp39-linux_armv6l.whl#sha256=a8a1cb7f5b851f5f58273e5d12aa871e5086f6bfd844f33f0b4bf20c83f429ec (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,308   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.6-cp39-cp39-linux_armv7l.whl#sha256=a8a1cb7f5b851f5f58273e5d12aa871e5086f6bfd844f33f0b4bf20c83f429ec (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,308   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp37-cp37m-linux_armv6l.whl#sha256=25d1bdfd25f377e21e8a522d9f3cd2ce3896cf857957c8ec876c69f4de8d53f5 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,309   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp37-cp37m-linux_armv7l.whl#sha256=25d1bdfd25f377e21e8a522d9f3cd2ce3896cf857957c8ec876c69f4de8d53f5 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,310   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp39-cp39-linux_armv6l.whl#sha256=de79a8099ce28793ecc89cf8dfbcb6542a270d00290c96903280f704e2ec22e7 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,310   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.5-cp39-cp39-linux_armv7l.whl#sha256=de79a8099ce28793ecc89cf8dfbcb6542a270d00290c96903280f704e2ec22e7 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,311   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp37-cp37m-linux_armv6l.whl#sha256=2d64935710bb05965f486f3bd9f258d8d479dc5c00dc1535ba5e285c8786dcf1 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,311   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp37-cp37m-linux_armv7l.whl#sha256=2d64935710bb05965f486f3bd9f258d8d479dc5c00dc1535ba5e285c8786dcf1 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,312   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp39-cp39-linux_armv6l.whl#sha256=c1983524eecc8638287c4a1e09dda961635e861bf6f9342dc566a9f9a4c0b771 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,312   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.3-cp39-cp39-linux_armv7l.whl#sha256=c1983524eecc8638287c4a1e09dda961635e861bf6f9342dc566a9f9a4c0b771 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,313   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp39-cp39-linux_armv6l.whl#sha256=24cfa04ff95ecb68f6d261ba4176e979846a0424ba781a1e314ca233c5206ae7 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,313   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp39-cp39-linux_armv7l.whl#sha256=24cfa04ff95ecb68f6d261ba4176e979846a0424ba781a1e314ca233c5206ae7 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,314   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp37-cp37m-linux_armv6l.whl#sha256=3fa03496ffbd230b85c032f9e1ba3129efbd4c37f6509c6cfef258ce69ed6925 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,315   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.2-cp37-cp37m-linux_armv7l.whl#sha256=3fa03496ffbd230b85c032f9e1ba3129efbd4c37f6509c6cfef258ce69ed6925 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,315   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.1-cp37-cp37m-linux_armv6l.whl#sha256=584155aa2ddfa324fcd872934f8b25a296c40b34797209bb754f4a641a5b27eb (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,316   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.1-cp37-cp37m-linux_armv7l.whl#sha256=584155aa2ddfa324fcd872934f8b25a296c40b34797209bb754f4a641a5b27eb (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,316   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.1-cp39-cp39-linux_armv6l.whl#sha256=41b03e81b9cd75c716643741a53b8d4d5aeb1633b5e07091c1a7355b6b44d233 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,317   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.1-cp39-cp39-linux_armv7l.whl#sha256=41b03e81b9cd75c716643741a53b8d4d5aeb1633b5e07091c1a7355b6b44d233 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,318   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp37-cp37m-linux_armv6l.whl#sha256=b0ac5fea57fee9d962de25688ffde053c705daa15588886ea6aa7d5ab0986077 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,318   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp37-cp37m-linux_armv7l.whl#sha256=b0ac5fea57fee9d962de25688ffde053c705daa15588886ea6aa7d5ab0986077 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,319   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp39-cp39-linux_armv6l.whl#sha256=1b6361e98ea6ec0f3a7a4cce9ec9569a117c26deb95d0ce2bcea9d6f1f38d503 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,319   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.8.0-cp39-cp39-linux_armv7l.whl#sha256=1b6361e98ea6ec0f3a7a4cce9ec9569a117c26deb95d0ce2bcea9d6f1f38d503 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,320   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.9-cp37-cp37m-linux_armv6l.whl#sha256=a6ee5c9ac5b2648bb87ca08a6491d955004770b58180224d6d24bdb8cec17458 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,320   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.9-cp37-cp37m-linux_armv7l.whl#sha256=a6ee5c9ac5b2648bb87ca08a6491d955004770b58180224d6d24bdb8cec17458 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,321   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.9-cp39-cp39-linux_armv6l.whl#sha256=223cbac9f53d732be3d157f8e68c124c79439d057ec079594c681d7c5327f342 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,322   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.9-cp39-cp39-linux_armv7l.whl#sha256=223cbac9f53d732be3d157f8e68c124c79439d057ec079594c681d7c5327f342 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,322   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.8-cp37-cp37m-linux_armv6l.whl#sha256=19e3b710f4af1a0cb530060979c4216d87f0bd8a71e9f41824cf3565abbcbbdb (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,323   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.8-cp37-cp37m-linux_armv7l.whl#sha256=19e3b710f4af1a0cb530060979c4216d87f0bd8a71e9f41824cf3565abbcbbdb (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,324   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.8-cp39-cp39-linux_armv6l.whl#sha256=c18e44dbd9cf047134d440ff4fbb18722a3fdb0f348d431e8b7bed7dd398bd6e (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,324   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.8-cp39-cp39-linux_armv7l.whl#sha256=c18e44dbd9cf047134d440ff4fbb18722a3fdb0f348d431e8b7bed7dd398bd6e (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,325   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.7-cp37-cp37m-linux_armv6l.whl#sha256=8e63b6afb6715f46aae20e77b81958cdc652a7b1b6d294c5d559f7f06d5a5106 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,325   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.7-cp37-cp37m-linux_armv7l.whl#sha256=8e63b6afb6715f46aae20e77b81958cdc652a7b1b6d294c5d559f7f06d5a5106 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,326   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.7-cp39-cp39-linux_armv6l.whl#sha256=53a48e2a1781a9ae00e1f905778bad58715b08cff2ed4605148de1e481c9d50e (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,327   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.7-cp39-cp39-linux_armv7l.whl#sha256=53a48e2a1781a9ae00e1f905778bad58715b08cff2ed4605148de1e481c9d50e (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,327   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.6-cp37-cp37m-linux_armv6l.whl#sha256=a85d0cfa7da9e3593e97f1c63822eb0a9733744fdeb19c3bbd09e1f4242e1d91 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,328   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.6-cp37-cp37m-linux_armv7l.whl#sha256=a85d0cfa7da9e3593e97f1c63822eb0a9733744fdeb19c3bbd09e1f4242e1d91 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,328   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.6-cp39-cp39-linux_armv6l.whl#sha256=d5e470ed8514697a92a69cccdc99ddf6da22ddde2cc24b3e6ed949645778116f (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,329   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.6-cp39-cp39-linux_armv7l.whl#sha256=d5e470ed8514697a92a69cccdc99ddf6da22ddde2cc24b3e6ed949645778116f (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,329   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.5-cp311-cp311-linux_armv6l.whl#sha256=901c091adc4fc8b89c9de8f139d92aeffbfb6dc91799f2f9019f61646044ddd7 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,330   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.5-cp311-cp311-linux_armv7l.whl#sha256=901c091adc4fc8b89c9de8f139d92aeffbfb6dc91799f2f9019f61646044ddd7 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,331   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.5-cp37-cp37m-linux_armv6l.whl#sha256=2670c23b960766e0d52c54881bf4a8a663345f17190e380f84a273d51c8cdb3f (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,331   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.5-cp37-cp37m-linux_armv7l.whl#sha256=2670c23b960766e0d52c54881bf4a8a663345f17190e380f84a273d51c8cdb3f (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,332   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.5-cp39-cp39-linux_armv6l.whl#sha256=55bb6252b29c31ce9b46ca6dc68ed50a4fbe0e44a1b3f8f6f57b13faf1c939c1 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,332   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.5-cp39-cp39-linux_armv7l.whl#sha256=55bb6252b29c31ce9b46ca6dc68ed50a4fbe0e44a1b3f8f6f57b13faf1c939c1 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,333   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.4-cp37-cp37m-linux_armv6l.whl#sha256=c59aab79b14443a5c4194c3a08c69a2f1a98abedfda3217c0b15e5f694cb8dc3 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,334   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.4-cp37-cp37m-linux_armv7l.whl#sha256=c59aab79b14443a5c4194c3a08c69a2f1a98abedfda3217c0b15e5f694cb8dc3 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,335   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.4-cp39-cp39-linux_armv6l.whl#sha256=8c575ac103cbab0a21e8ac9ee5d64f45634da6dcfa639e87f54e4afd333fe22f (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,335   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.7.4-cp39-cp39-linux_armv7l.whl#sha256=8c575ac103cbab0a21e8ac9ee5d64f45634da6dcfa639e87f54e4afd333fe22f (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,335   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.6.7-cp37-cp37m-linux_armv6l.whl#sha256=e6497cd1fa524aee3c9d431fc1556e29e1ff896a6c49eca8572fb6ffc399cd6c (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,336   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.6.7-cp37-cp37m-linux_armv7l.whl#sha256=e6497cd1fa524aee3c9d431fc1556e29e1ff896a6c49eca8572fb6ffc399cd6c (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,336   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.6.7-cp39-cp39-linux_armv6l.whl#sha256=6975400d079ca432444a3145d286b6b9c52b60c61acfbb1ad67be92f2b7a4585 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,337   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.6.7-cp39-cp39-linux_armv7l.whl#sha256=6975400d079ca432444a3145d286b6b9c52b60c61acfbb1ad67be92f2b7a4585 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,338   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.5.4-py3-none-any.whl#sha256=9ea33917985ebf7bdfdbb276c83c4b2b1be17adbefb6062cc28c7ac037e3fab8 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,338   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.5.3-py3-none-any.whl#sha256=60b48ad38d8567be173c2a4a384dd7d742cf0b9f80eac5510c5987a9e1b668b6 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,339   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.5.2-py3-none-any.whl#sha256=89c944d279cde5c1d1ea898c4495e8076b1a1c477f1594f024110adcb137070e (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,340   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.4.8-py3-none-any.whl#sha256=9f728761688514ebb5e7fbd00f93960d862d928411f697f3beaf5c05b55bcd29 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,340   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.4.7-py3-none-any.whl#sha256=0167204d0c1ad4269753d9981920d6d47d0936fa85f5a709716abe11f2f63924 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,341   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.4.6-py3-none-any.whl#sha256=aa0c660454f157d45a5709a2fe3ec7e6c79af7be1dc5866ab3497475f2197d8d (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,341   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.4.4-py3-none-any.whl#sha256=328348766e2960fdf270fdf395fcb1b60acc7f8741927b76535453e8f3731f03 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,342   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.4.3-py3-none-any.whl#sha256=cd086bf69fafb879119d434964d0fd0920aa414c2b72fd29628920d6b5615e44 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,343   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.3.4-py3-none-any.whl#sha256=a5284594c607376665fb0592efa0f7696a9d1b437641b385a939bb6e171e5b58 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,343   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.3.3-py3-none-any.whl#sha256=c7787bffc57340080dbc84bbc30cf3adbec8c10947b34a038b821fd98f93e138 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,344   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.3.2-py3-none-any.whl#sha256=0f9deb57395d35af8d9e4300bd57eb6fb5537feb62576b4df5611326e007a946 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,344   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.3.1-py3-none-any.whl#sha256=b5d47dfce102b3af0001276b5d6fda0f055e2ef4f0076a06286d3b5e4f2361b4 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,345   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.3.0-py3-none-any.whl#sha256=864f229abf24e864927569f3a17c74c39b977d8b7ba63cf2792e71f2c925eebd (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,345   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.2.9-py3-none-any.whl#sha256=76a22c44b710351a9d3c94d7e7c1d96c61e90251004b2a34cdcc92280d423a09 (from https://www.piwheels.org/simple/moleculekit/)
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2024-04-19T11:38:15,352   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.31-py3-none-any.whl#sha256=af99e15f25bf5959a538b538677dec0e483d524f6ae9698b92885f3667b8a5c9 (from https://www.piwheels.org/simple/moleculekit/)
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2024-04-19T11:38:15,353   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.29-py3-none-any.whl#sha256=79d2f4b46738f696865e3b5c591afd379add5aa8e1dfc58fbfb58e046e3810f1 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,353   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.27-py3-none-any.whl#sha256=fc3413a0265ea20a77f4167b72a3c80b8b45f7338a57d1f999fba81a45110a38 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,354   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.26-py3-none-any.whl#sha256=fe35ec2f09b9b40631f7b47c1fe463b18166a272776c4c4f839718c50fd62e14 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,354   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.24-py3-none-any.whl#sha256=13d00e3b7c8c41bc82131fa7f6df5c575b3ed0efc89b715f8ee35bb68dbe1b68 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,355   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.23-py3-none-any.whl#sha256=a174c23806ee69677ad74cd6376e8a22f000abcd5817ae7bd67ec2639d750a72 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,356   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.22-py3-none-any.whl#sha256=4bdcc64f301cdd7a24c6f2b0d515152bbde40124568d72b2046003aba6d7d34c (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,356   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.21-py3-none-any.whl#sha256=3f591427a4c43521256cd46422de7c64268ec392e356b7ff3dbb8c0bc5e0c686 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,357   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.19-py3-none-any.whl#sha256=1005a5a682737b1ba3f4858ca3919c129caae8d962bf750308e4cf6e7d37e215 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,357   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.17-py3-none-any.whl#sha256=cd99998c6c3ee48df7148cec7161f3696beede842d4e93bb9da19fa9e2c6c459 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,358   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.16-py3-none-any.whl#sha256=8045990a2fc7c805a4ab8244abe9eae67ac92495cbce12f1c9e8b0daa26a77b1 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,359   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.15-py3-none-any.whl#sha256=4db5d8b5350b36ce41d225c471f0fdd64f708826935ac50675fb278c00275339 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,360   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.14-py3-none-any.whl#sha256=051435884ce3f924fc9ba4dcb342a0d0ac85ff52bda6e656389f9a6f7eefec84 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,360   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.12-py3-none-any.whl#sha256=8d96fbe0cf32ec0d217201a2f3274aedc42fb18f06b218394d4be0bfee25181a (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,361   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.9-py3-none-any.whl#sha256=f91729081bef559daf39b7eecfd7ae81dbd90706ad12061dc95146e3737a7385 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,361   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.8-py3-none-any.whl#sha256=716d25ae18a4a9a3c8cfb1f0b0399f72463490e4f85a66631f3e77c0ddc427e3 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,361   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.7-py3-none-any.whl#sha256=899ef09b80e1ad2e3931cb2023fae09cfeecd45b83fade6c8e8739126ca67a20 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,362   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.6-py3-none-any.whl#sha256=0a288cd1efd660482dcc967caed02315dd8f02c19a0287eee0b8519d761db1b3 (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,363   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.5-py3-none-any.whl#sha256=2f111e31b3f90e63ca0154c528585208b8bd41a065aa0078325683f4b36eacec (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,363   Skipping link: No binaries permitted for moleculekit: https://www.piwheels.org/simple/moleculekit/moleculekit-0.1.4-py3-none-any.whl#sha256=5784491ff294e145a00311f8239aaa0b92c12605db0508ee3e10469b80d4cadd (from https://www.piwheels.org/simple/moleculekit/)
2024-04-19T11:38:15,364 Skipping link: not a file: https://www.piwheels.org/simple/moleculekit/
2024-04-19T11:38:15,365 Skipping link: not a file: https://pypi.org/simple/moleculekit/
2024-04-19T11:38:15,405 Given no hashes to check 1 links for project 'moleculekit': discarding no candidates
2024-04-19T11:38:15,424 Collecting moleculekit==1.8.31
2024-04-19T11:38:15,426   Created temporary directory: /tmp/pip-unpack-_6w9ev_v
2024-04-19T11:38:15,744   Downloading moleculekit-1.8.31.tar.gz (6.8 MB)
2024-04-19T11:38:18,397   Added moleculekit==1.8.31 from https://files.pythonhosted.org/packages/d6/e2/f7f2b1870c62092c3d84ac0055b50305611a1253142cb592babdfcbdb266/moleculekit-1.8.31.tar.gz to build tracker '/tmp/pip-build-tracker-d5655o44'
2024-04-19T11:38:18,406   Created temporary directory: /tmp/pip-build-env-ot2ws_un
2024-04-19T11:38:18,410   Installing build dependencies: started
2024-04-19T11:38:18,411   Running command pip subprocess to install build dependencies
2024-04-19T11:38:19,536   Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2024-04-19T11:38:20,035   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-04-19T11:38:21,561   Collecting setuptools
2024-04-19T11:38:21,577     Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.5.1-py3-none-any.whl (894 kB)
2024-04-19T11:38:22,236     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/3a/be/650f9c091ef71cb01d735775d554e068752d3ff63d7943b26316dc401749/numpy-1.21.2.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2024-04-19T11:38:22,240     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/5f/d6/ad58ded26556eaeaa8c971e08b6466f17c4ac4d786cd3d800e26ce59cc01/numpy-1.21.3.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2024-04-19T11:38:22,243     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/fb/48/b0708ebd7718a8933f0d3937513ef8ef2f4f04529f1f66ca86d873043921/numpy-1.21.4.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2024-04-19T11:38:22,246     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/c2/a8/a924a09492bdfee8c2ec3094d0a13f2799800b4fdc9c890738aeeb12c72e/numpy-1.21.5.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2024-04-19T11:38:22,249     Link requires a different Python (3.11.2 not in: '>=3.7,<3.11'): https://files.pythonhosted.org/packages/45/b7/de7b8e67f2232c26af57c205aaad29fe17754f793404f59c8a730c7a191a/numpy-1.21.6.zip (from https://pypi.org/simple/numpy/) (requires-python:>=3.7,<3.11)
2024-04-19T11:38:22,526   Collecting numpy>=1.18.5
2024-04-19T11:38:22,552     Using cached https://www.piwheels.org/simple/numpy/numpy-1.26.4-cp311-cp311-linux_armv7l.whl (5.6 MB)
2024-04-19T11:38:23,998   Collecting Cython>=0.29.21
2024-04-19T11:38:24,014     Using cached https://www.piwheels.org/simple/cython/Cython-3.0.10-cp311-cp311-linux_armv7l.whl (11.8 MB)
2024-04-19T11:38:24,412   Collecting toml
2024-04-19T11:38:24,427     Using cached https://www.piwheels.org/simple/toml/toml-0.10.2-py2.py3-none-any.whl (16 kB)
2024-04-19T11:38:24,600   Collecting versioneer==0.28 (from versioneer[toml]==0.28)
2024-04-19T11:38:24,617     Using cached https://www.piwheels.org/simple/versioneer/versioneer-0.28-py3-none-any.whl (45 kB)
2024-04-19T11:38:27,258   Installing collected packages: versioneer, toml, setuptools, numpy, Cython
2024-04-19T11:38:27,289     Creating /tmp/pip-build-env-ot2ws_un/overlay/local/bin
2024-04-19T11:38:27,291     changing mode of /tmp/pip-build-env-ot2ws_un/overlay/local/bin/versioneer to 755
2024-04-19T11:38:37,923     changing mode of /tmp/pip-build-env-ot2ws_un/overlay/local/bin/f2py to 755
2024-04-19T11:38:41,526     changing mode of /tmp/pip-build-env-ot2ws_un/overlay/local/bin/cygdb to 755
2024-04-19T11:38:41,528     changing mode of /tmp/pip-build-env-ot2ws_un/overlay/local/bin/cython to 755
2024-04-19T11:38:41,530     changing mode of /tmp/pip-build-env-ot2ws_un/overlay/local/bin/cythonize to 755
2024-04-19T11:38:41,575   Successfully installed Cython-3.0.10 numpy-1.26.4 setuptools-69.5.1 toml-0.10.2 versioneer-0.28
2024-04-19T11:38:42,246   Installing build dependencies: finished with status 'done'
2024-04-19T11:38:42,249   Getting requirements to build wheel: started
2024-04-19T11:38:42,251   Running command Getting requirements to build wheel
2024-04-19T11:39:17,800   warning: moleculekit/wrapping/wrapping.pyx:47:4: Unreachable code
2024-04-19T11:39:26,169   Compiling moleculekit/interactions/hbonds/hbonds.pyx because it depends on /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libcpp/vector.pxd.
2024-04-19T11:39:26,170   Compiling moleculekit/interactions/pipi/pipi.pyx because it depends on /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libcpp/vector.pxd.
2024-04-19T11:39:26,170   Compiling moleculekit/interactions/cationpi/cationpi.pyx because it depends on /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libcpp/vector.pxd.
2024-04-19T11:39:26,171   Compiling moleculekit/interactions/sigmahole/sigmahole.pyx because it depends on /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libcpp/vector.pxd.
2024-04-19T11:39:26,171   Compiling moleculekit/wrapping/wrapping.pyx because it depends on /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libcpp/vector.pxd.
2024-04-19T11:39:26,172   Compiling moleculekit/bondguesser_utils/bondguesser_utils.pyx because it depends on /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libcpp/vector.pxd.
2024-04-19T11:39:26,173   Compiling moleculekit/atomselect_utils/atomselect_utils.pyx because it depends on /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libcpp/vector.pxd.
2024-04-19T11:39:26,173   Compiling moleculekit/distance_utils/distance_utils.pyx because it depends on /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libcpp/vector.pxd.
2024-04-19T11:39:26,173   Compiling moleculekit/occupancy_utils/occupancy_utils.pyx because it depends on /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libcpp/vector.pxd.
2024-04-19T11:39:26,174   Compiling moleculekit/cython_utils/cython_utils.pyx because it depends on /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libcpp/vector.pxd.
2024-04-19T11:39:26,174   Compiling moleculekit/fileformats/xtc/xtc.pyx because it depends on /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libc/string.pxd.
2024-04-19T11:39:26,175   Compiling moleculekit/fileformats/xtc/trr.pyx because it depends on /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libc/string.pxd.
2024-04-19T11:39:26,175   Compiling moleculekit/fileformats/dcd/dcd.pyx because it depends on /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libc/string.pxd.
2024-04-19T11:39:26,176   Compiling moleculekit/fileformats/binpos/binpos.pyx because it depends on /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libc/string.pxd.
2024-04-19T11:39:26,176   Compiling moleculekit/tmalign/tmalign_util.pyx because it depends on /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/Cython/Includes/libcpp/vector.pxd.
2024-04-19T11:39:26,177   [ 1/15] Cythonizing moleculekit/atomselect_utils/atomselect_utils.pyx
2024-04-19T11:39:26,177   [ 2/15] Cythonizing moleculekit/bondguesser_utils/bondguesser_utils.pyx
2024-04-19T11:39:26,178   [ 3/15] Cythonizing moleculekit/cython_utils/cython_utils.pyx
2024-04-19T11:39:26,178   [ 4/15] Cythonizing moleculekit/distance_utils/distance_utils.pyx
2024-04-19T11:39:26,179   [ 5/15] Cythonizing moleculekit/fileformats/dcd/dcd.pyx
2024-04-19T11:39:26,179   [ 6/15] Cythonizing moleculekit/interactions/cationpi/cationpi.pyx
2024-04-19T11:39:26,180   [ 7/15] Cythonizing moleculekit/interactions/hbonds/hbonds.pyx
2024-04-19T11:39:26,180   [ 8/15] Cythonizing moleculekit/interactions/pipi/pipi.pyx
2024-04-19T11:39:26,181   [ 9/15] Cythonizing moleculekit/interactions/sigmahole/sigmahole.pyx
2024-04-19T11:39:26,181   [10/15] Cythonizing moleculekit/occupancy_utils/occupancy_utils.pyx
2024-04-19T11:39:26,182   [11/15] Cythonizing moleculekit/tmalign/tmalign_util.pyx
2024-04-19T11:39:26,182   [12/15] Cythonizing moleculekit/wrapping/wrapping.pyx
2024-04-19T11:39:26,183   [13/15] Cythonizing moleculekit/fileformats/binpos/binpos.pyx
2024-04-19T11:39:26,184   [14/15] Cythonizing moleculekit/fileformats/xtc/trr.pyx
2024-04-19T11:39:26,184   [15/15] Cythonizing moleculekit/fileformats/xtc/xtc.pyx
2024-04-19T11:39:26,455   running egg_info
2024-04-19T11:39:26,462   writing moleculekit.egg-info/PKG-INFO
2024-04-19T11:39:26,465   writing dependency_links to moleculekit.egg-info/dependency_links.txt
2024-04-19T11:39:26,468   writing requirements to moleculekit.egg-info/requires.txt
2024-04-19T11:39:26,470   writing top-level names to moleculekit.egg-info/top_level.txt
2024-04-19T11:39:26,498   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,499   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,500   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,500   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,501   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,501   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,502   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,503   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,503   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,504   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,504   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,505   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,505   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,506   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,507   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,507   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,508   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,508   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,509   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,509   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,510   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,511   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,511   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,511   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,512   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,512   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,513   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,513   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,514   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,514   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,515   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,516   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,516   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,517   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,517   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,518   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,519   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,519   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,520   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,520   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,521   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,521   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,522   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,522   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,523   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,523   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,524   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,524   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,525   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,525   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,525   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,526   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,527   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,527   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,528   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,528   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,529   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,529   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,530   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,530   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,532   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,533   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,534   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,534   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,535   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,536   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,537   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,538   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,538   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,539   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,540   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,541   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,542   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,542   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,543   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:26,552   reading manifest file 'moleculekit.egg-info/SOURCES.txt'
2024-04-19T11:39:26,584   reading manifest template 'MANIFEST.in'
2024-04-19T11:39:26,830   no previously-included directories found matching 'moleculekit/test-data'
2024-04-19T11:39:26,831   no previously-included directories found matching 'moleculekit/tests'
2024-04-19T11:39:26,833   no previously-included directories found matching 'package'
2024-04-19T11:39:26,833   adding license file 'LICENSE'
2024-04-19T11:39:26,850   writing manifest file 'moleculekit.egg-info/SOURCES.txt'
2024-04-19T11:39:28,516   Getting requirements to build wheel: finished with status 'done'
2024-04-19T11:39:28,529   Installing backend dependencies: started
2024-04-19T11:39:28,530   Running command pip subprocess to install backend dependencies
2024-04-19T11:39:29,768   Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2024-04-19T11:39:30,301   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-04-19T11:39:31,050   Collecting wheel
2024-04-19T11:39:31,065     Using cached https://www.piwheels.org/simple/wheel/wheel-0.43.0-py3-none-any.whl (65 kB)
2024-04-19T11:39:33,314   Installing collected packages: wheel
2024-04-19T11:39:33,534     Creating /tmp/pip-build-env-ot2ws_un/normal/local/bin
2024-04-19T11:39:33,536     changing mode of /tmp/pip-build-env-ot2ws_un/normal/local/bin/wheel to 755
2024-04-19T11:39:33,547   Successfully installed wheel-0.43.0
2024-04-19T11:39:33,997   Installing backend dependencies: finished with status 'done'
2024-04-19T11:39:33,999   Created temporary directory: /tmp/pip-modern-metadata-icqagq4r
2024-04-19T11:39:34,001   Preparing metadata (pyproject.toml): started
2024-04-19T11:39:34,002   Running command Preparing metadata (pyproject.toml)
2024-04-19T11:39:36,411   running dist_info
2024-04-19T11:39:36,413   creating /tmp/pip-modern-metadata-icqagq4r/moleculekit.egg-info
2024-04-19T11:39:36,418   writing /tmp/pip-modern-metadata-icqagq4r/moleculekit.egg-info/PKG-INFO
2024-04-19T11:39:36,422   writing dependency_links to /tmp/pip-modern-metadata-icqagq4r/moleculekit.egg-info/dependency_links.txt
2024-04-19T11:39:36,424   writing requirements to /tmp/pip-modern-metadata-icqagq4r/moleculekit.egg-info/requires.txt
2024-04-19T11:39:36,425   writing top-level names to /tmp/pip-modern-metadata-icqagq4r/moleculekit.egg-info/top_level.txt
2024-04-19T11:39:36,426   writing manifest file '/tmp/pip-modern-metadata-icqagq4r/moleculekit.egg-info/SOURCES.txt'
2024-04-19T11:39:36,453   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,454   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,455   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,455   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,456   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,456   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,457   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,458   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,458   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,459   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,459   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
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2024-04-19T11:39:36,460   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,460   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,461   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,462   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,462   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,463   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,464   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,464   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,465   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,465   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,466   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,466   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,467   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,468   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,469   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,469   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,469   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,470   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,470   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,471   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,471   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,472   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,473   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,473   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,474   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,474   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,475   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,476   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,476   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,477   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,477   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,478   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,479   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,479   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,479   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,480   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,480   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,481   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,481   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,482   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,482   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,483   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,483   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,484   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,484   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,484   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,485   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,485   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,486   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,486   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,487   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,488   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,488   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,488   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,489   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,489   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,490   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,490   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,491   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,491   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,491   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,492   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,492   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:36,493   reading manifest file '/tmp/pip-modern-metadata-icqagq4r/moleculekit.egg-info/SOURCES.txt'
2024-04-19T11:39:36,493   reading manifest template 'MANIFEST.in'
2024-04-19T11:39:36,742   no previously-included directories found matching 'moleculekit/test-data'
2024-04-19T11:39:36,743   no previously-included directories found matching 'moleculekit/tests'
2024-04-19T11:39:36,744   no previously-included directories found matching 'package'
2024-04-19T11:39:36,744   adding license file 'LICENSE'
2024-04-19T11:39:36,756   writing manifest file '/tmp/pip-modern-metadata-icqagq4r/moleculekit.egg-info/SOURCES.txt'
2024-04-19T11:39:36,764   creating '/tmp/pip-modern-metadata-icqagq4r/moleculekit-1.8.31.dist-info'
2024-04-19T11:39:37,000   Preparing metadata (pyproject.toml): finished with status 'done'
2024-04-19T11:39:37,005   Source in /tmp/pip-wheel-cbpd4337/moleculekit_d6a317309c1949f9975cbd386461ac3c has version 1.8.31, which satisfies requirement moleculekit==1.8.31 from https://files.pythonhosted.org/packages/d6/e2/f7f2b1870c62092c3d84ac0055b50305611a1253142cb592babdfcbdb266/moleculekit-1.8.31.tar.gz
2024-04-19T11:39:37,006   Removed moleculekit==1.8.31 from https://files.pythonhosted.org/packages/d6/e2/f7f2b1870c62092c3d84ac0055b50305611a1253142cb592babdfcbdb266/moleculekit-1.8.31.tar.gz from build tracker '/tmp/pip-build-tracker-d5655o44'
2024-04-19T11:39:37,012 Created temporary directory: /tmp/pip-unpack-b0_943nu
2024-04-19T11:39:37,013 Created temporary directory: /tmp/pip-unpack-26fjhi5g
2024-04-19T11:39:37,020 Building wheels for collected packages: moleculekit
2024-04-19T11:39:37,025   Created temporary directory: /tmp/pip-wheel-har0ro7r
2024-04-19T11:39:37,025   Destination directory: /tmp/pip-wheel-har0ro7r
2024-04-19T11:39:37,027   Building wheel for moleculekit (pyproject.toml): started
2024-04-19T11:39:37,028   Running command Building wheel for moleculekit (pyproject.toml)
2024-04-19T11:39:39,274   running bdist_wheel
2024-04-19T11:39:39,288   running build
2024-04-19T11:39:39,289   running build_py
2024-04-19T11:39:39,295   creating build
2024-04-19T11:39:39,296   creating build/lib.linux-armv7l-cpython-311
2024-04-19T11:39:39,296   creating build/lib.linux-armv7l-cpython-311/moleculekit
2024-04-19T11:39:39,297   copying moleculekit/bondguesser.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2024-04-19T11:39:39,300   copying moleculekit/version.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2024-04-19T11:39:39,301   copying moleculekit/vmdgraphics.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2024-04-19T11:39:39,303   copying moleculekit/dihedral.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2024-04-19T11:39:39,305   copying moleculekit/rdkitintegration.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2024-04-19T11:39:39,307   copying moleculekit/vmdviewer.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2024-04-19T11:39:39,309   copying moleculekit/util.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2024-04-19T11:39:39,311   copying moleculekit/molecule.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2024-04-19T11:39:39,315   copying moleculekit/rcsb.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2024-04-19T11:39:39,317   copying moleculekit/pymolgraphics.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2024-04-19T11:39:39,319   copying moleculekit/opm.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2024-04-19T11:39:39,321   copying moleculekit/viewer.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2024-04-19T11:39:39,323   copying moleculekit/distance.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2024-04-19T11:39:39,325   copying moleculekit/align.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2024-04-19T11:39:39,327   copying moleculekit/_version.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2024-04-19T11:39:39,328   copying moleculekit/config.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2024-04-19T11:39:39,330   copying moleculekit/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2024-04-19T11:39:39,331   copying moleculekit/readers.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2024-04-19T11:39:39,335   copying moleculekit/writers.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2024-04-19T11:39:39,339   copying moleculekit/periodictable.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2024-04-19T11:39:39,341   copying moleculekit/home.py -> build/lib.linux-armv7l-cpython-311/moleculekit
2024-04-19T11:39:39,343   creating build/lib.linux-armv7l-cpython-311/moleculekit/fileformats
2024-04-19T11:39:39,344   copying moleculekit/fileformats/utils.py -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats
2024-04-19T11:39:39,347   copying moleculekit/fileformats/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats
2024-04-19T11:39:39,348   copying moleculekit/fileformats/netcdf.py -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats
2024-04-19T11:39:39,352   creating build/lib.linux-armv7l-cpython-311/moleculekit/projections
2024-04-19T11:39:39,353   copying moleculekit/projections/metricgyration.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2024-04-19T11:39:39,355   copying moleculekit/projections/util.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2024-04-19T11:39:39,357   copying moleculekit/projections/metriccoordinate.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2024-04-19T11:39:39,359   copying moleculekit/projections/metricsasa.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2024-04-19T11:39:39,361   copying moleculekit/projections/metricfluctuation.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2024-04-19T11:39:39,363   copying moleculekit/projections/metricsecondarystructure.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2024-04-19T11:39:39,365   copying moleculekit/projections/metrictmscore.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2024-04-19T11:39:39,367   copying moleculekit/projections/metricplumed2.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2024-04-19T11:39:39,370   copying moleculekit/projections/metricshell.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2024-04-19T11:39:39,372   copying moleculekit/projections/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2024-04-19T11:39:39,373   copying moleculekit/projections/projection.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2024-04-19T11:39:39,375   copying moleculekit/projections/metricdihedral.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2024-04-19T11:39:39,377   copying moleculekit/projections/metricdistance.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2024-04-19T11:39:39,380   copying moleculekit/projections/metricrmsd.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2024-04-19T11:39:39,382   copying moleculekit/projections/metricsphericalcoordinate.py -> build/lib.linux-armv7l-cpython-311/moleculekit/projections
2024-04-19T11:39:39,385   creating build/lib.linux-armv7l-cpython-311/moleculekit/interactions
2024-04-19T11:39:39,386   copying moleculekit/interactions/interactions.py -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions
2024-04-19T11:39:39,389   copying moleculekit/interactions/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions
2024-04-19T11:39:39,391   creating build/lib.linux-armv7l-cpython-311/moleculekit/atomselect
2024-04-19T11:39:39,392   copying moleculekit/atomselect/atomselect.py -> build/lib.linux-armv7l-cpython-311/moleculekit/atomselect
2024-04-19T11:39:39,394   copying moleculekit/atomselect/analyze.py -> build/lib.linux-armv7l-cpython-311/moleculekit/atomselect
2024-04-19T11:39:39,396   copying moleculekit/atomselect/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/atomselect
2024-04-19T11:39:39,398   copying moleculekit/atomselect/languageparser.py -> build/lib.linux-armv7l-cpython-311/moleculekit/atomselect
2024-04-19T11:39:39,400   creating build/lib.linux-armv7l-cpython-311/moleculekit/smallmol
2024-04-19T11:39:39,401   copying moleculekit/smallmol/test_smallmollib.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol
2024-04-19T11:39:39,404   copying moleculekit/smallmol/smallmolcdp.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol
2024-04-19T11:39:39,406   copying moleculekit/smallmol/util.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol
2024-04-19T11:39:39,408   copying moleculekit/smallmol/test_smallmol.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol
2024-04-19T11:39:39,410   copying moleculekit/smallmol/smallmol.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol
2024-04-19T11:39:39,413   copying moleculekit/smallmol/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol
2024-04-19T11:39:39,415   copying moleculekit/smallmol/smallmollib.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol
2024-04-19T11:39:39,418   creating build/lib.linux-armv7l-cpython-311/moleculekit/tools
2024-04-19T11:39:39,419   copying moleculekit/tools/autosegment.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2024-04-19T11:39:39,422   copying moleculekit/tools/preparation_customres.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2024-04-19T11:39:39,424   copying moleculekit/tools/docking.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2024-04-19T11:39:39,426   copying moleculekit/tools/voxeldescriptors.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2024-04-19T11:39:39,428   copying moleculekit/tools/modelling.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2024-04-19T11:39:39,431   copying moleculekit/tools/graphalignment.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2024-04-19T11:39:39,433   copying moleculekit/tools/crystalpacking.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2024-04-19T11:39:39,435   copying moleculekit/tools/preparation.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2024-04-19T11:39:39,438   copying moleculekit/tools/moleculechecks.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2024-04-19T11:39:39,440   copying moleculekit/tools/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2024-04-19T11:39:39,441   copying moleculekit/tools/sequencestructuralalignment.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2024-04-19T11:39:39,443   copying moleculekit/tools/detect.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2024-04-19T11:39:39,446   copying moleculekit/tools/hhblitsprofile.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2024-04-19T11:39:39,448   copying moleculekit/tools/atomtyper.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools
2024-04-19T11:39:39,451   creating build/lib.linux-armv7l-cpython-311/moleculekit/ply
2024-04-19T11:39:39,451   copying moleculekit/ply/lex.py -> build/lib.linux-armv7l-cpython-311/moleculekit/ply
2024-04-19T11:39:39,454   copying moleculekit/ply/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/ply
2024-04-19T11:39:39,456   copying moleculekit/ply/yacc.py -> build/lib.linux-armv7l-cpython-311/moleculekit/ply
2024-04-19T11:39:39,460   creating build/lib.linux-armv7l-cpython-311/moleculekit/pdbx
2024-04-19T11:39:39,461   copying moleculekit/pdbx/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx
2024-04-19T11:39:39,463   creating build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools
2024-04-19T11:39:39,464   copying moleculekit/smallmol/tools/restrainedembed.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools
2024-04-19T11:39:39,465   copying moleculekit/smallmol/tools/clustering.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools
2024-04-19T11:39:39,468   copying moleculekit/smallmol/tools/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools
2024-04-19T11:39:39,469   copying moleculekit/smallmol/tools/test_tools.py -> build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools
2024-04-19T11:39:39,472   creating build/lib.linux-armv7l-cpython-311/moleculekit/tools/obabel_tools
2024-04-19T11:39:39,473   copying moleculekit/tools/obabel_tools/obabel_cli.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools/obabel_tools
2024-04-19T11:39:39,475   copying moleculekit/tools/obabel_tools/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/tools/obabel_tools
2024-04-19T11:39:39,477   creating build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/writer
2024-04-19T11:39:39,478   copying moleculekit/pdbx/writer/PdbxWriter.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/writer
2024-04-19T11:39:39,480   copying moleculekit/pdbx/writer/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/writer
2024-04-19T11:39:39,482   creating build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests
2024-04-19T11:39:39,483   copying moleculekit/pdbx/tests/PdbxWriterTests.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests
2024-04-19T11:39:39,485   copying moleculekit/pdbx/tests/PdbxReadWriteTests.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests
2024-04-19T11:39:39,487   copying moleculekit/pdbx/tests/PdbxReaderTests.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests
2024-04-19T11:39:39,489   copying moleculekit/pdbx/tests/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests
2024-04-19T11:39:39,491   creating build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader
2024-04-19T11:39:39,492   copying moleculekit/pdbx/reader/PdbxReader.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader
2024-04-19T11:39:39,494   copying moleculekit/pdbx/reader/PdbxParser.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader
2024-04-19T11:39:39,496   copying moleculekit/pdbx/reader/__init__.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader
2024-04-19T11:39:39,498   copying moleculekit/pdbx/reader/PdbxContainers.py -> build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader
2024-04-19T11:39:39,500   running egg_info
2024-04-19T11:39:39,505   writing moleculekit.egg-info/PKG-INFO
2024-04-19T11:39:39,508   writing dependency_links to moleculekit.egg-info/dependency_links.txt
2024-04-19T11:39:39,509   writing requirements to moleculekit.egg-info/requires.txt
2024-04-19T11:39:39,510   writing top-level names to moleculekit.egg-info/top_level.txt
2024-04-19T11:39:39,527   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,527   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,528   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,529   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,529   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,530   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,530   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,531   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,532   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,532   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,533   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,533   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,534   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,534   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,535   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,536   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,536   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,537   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,537   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,537   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,538   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,538   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,539   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,540   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,540   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,541   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,541   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,542   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,542   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,543   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,544   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,544   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,545   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,545   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,546   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,546   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,547   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,547   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,548   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,548   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,549   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,549   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,550   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,551   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,551   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,552   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,552   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,553   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,553   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,554   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,555   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,555   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,556   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,556   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,556   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,557   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,557   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,558   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,558   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,559   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,559   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,560   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,561   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,561   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,562   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,562   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,563   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,563   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,564   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,565   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,565   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,565   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,566   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,566   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,567   dependency /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative
2024-04-19T11:39:39,567   reading manifest file 'moleculekit.egg-info/SOURCES.txt'
2024-04-19T11:39:39,568   reading manifest template 'MANIFEST.in'
2024-04-19T11:39:39,797   no previously-included directories found matching 'moleculekit/test-data'
2024-04-19T11:39:39,798   no previously-included directories found matching 'moleculekit/tests'
2024-04-19T11:39:39,799   no previously-included directories found matching 'package'
2024-04-19T11:39:39,800   adding license file 'LICENSE'
2024-04-19T11:39:39,814   writing manifest file 'moleculekit.egg-info/SOURCES.txt'
2024-04-19T11:39:39,823   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.atomselect_utils' is absent from the `packages` configuration.
2024-04-19T11:39:39,824   !!

2024-04-19T11:39:39,825           ********************************************************************************
2024-04-19T11:39:39,826           ############################
2024-04-19T11:39:39,827           # Package would be ignored #
2024-04-19T11:39:39,828           ############################
2024-04-19T11:39:39,828           Python recognizes 'moleculekit.atomselect_utils' as an importable package[^1],
2024-04-19T11:39:39,829           but it is absent from setuptools' `packages` configuration.

2024-04-19T11:39:39,830           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-19T11:39:39,831           package, please make sure that 'moleculekit.atomselect_utils' is explicitly added
2024-04-19T11:39:39,831           to the `packages` configuration field.

2024-04-19T11:39:39,832           Alternatively, you can also rely on setuptools' discovery methods
2024-04-19T11:39:39,833           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-19T11:39:39,833           instead of `find_packages(...)`/`find:`).

2024-04-19T11:39:39,834           You can read more about "package discovery" on setuptools documentation page:

2024-04-19T11:39:39,836           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-19T11:39:39,837           If you don't want 'moleculekit.atomselect_utils' to be distributed and are
2024-04-19T11:39:39,837           already explicitly excluding 'moleculekit.atomselect_utils' via
2024-04-19T11:39:39,838           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-19T11:39:39,838           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-19T11:39:39,839           combination with a more fine grained `package-data` configuration.

2024-04-19T11:39:39,840           You can read more about "package data files" on setuptools documentation page:

2024-04-19T11:39:39,841           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-19T11:39:39,842           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-19T11:39:39,842                 even if it does not contain any `.py` files.
2024-04-19T11:39:39,842                 On the other hand, currently there is no concept of package data
2024-04-19T11:39:39,843                 directory, all directories are treated like packages.
2024-04-19T11:39:39,843           ********************************************************************************

2024-04-19T11:39:39,844   !!
2024-04-19T11:39:39,844     check.warn(importable)
2024-04-19T11:39:39,844   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.bondguesser_utils' is absent from the `packages` configuration.
2024-04-19T11:39:39,845   !!

2024-04-19T11:39:39,846           ********************************************************************************
2024-04-19T11:39:39,846           ############################
2024-04-19T11:39:39,846           # Package would be ignored #
2024-04-19T11:39:39,847           ############################
2024-04-19T11:39:39,847           Python recognizes 'moleculekit.bondguesser_utils' as an importable package[^1],
2024-04-19T11:39:39,848           but it is absent from setuptools' `packages` configuration.

2024-04-19T11:39:39,849           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-19T11:39:39,849           package, please make sure that 'moleculekit.bondguesser_utils' is explicitly added
2024-04-19T11:39:39,850           to the `packages` configuration field.

2024-04-19T11:39:39,851           Alternatively, you can also rely on setuptools' discovery methods
2024-04-19T11:39:39,852           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-19T11:39:39,852           instead of `find_packages(...)`/`find:`).

2024-04-19T11:39:39,853           You can read more about "package discovery" on setuptools documentation page:

2024-04-19T11:39:39,854           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-19T11:39:39,855           If you don't want 'moleculekit.bondguesser_utils' to be distributed and are
2024-04-19T11:39:39,856           already explicitly excluding 'moleculekit.bondguesser_utils' via
2024-04-19T11:39:39,856           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-19T11:39:39,857           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-19T11:39:39,857           combination with a more fine grained `package-data` configuration.

2024-04-19T11:39:39,858           You can read more about "package data files" on setuptools documentation page:

2024-04-19T11:39:39,859           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-19T11:39:39,861           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-19T11:39:39,861                 even if it does not contain any `.py` files.
2024-04-19T11:39:39,862                 On the other hand, currently there is no concept of package data
2024-04-19T11:39:39,862                 directory, all directories are treated like packages.
2024-04-19T11:39:39,863           ********************************************************************************

2024-04-19T11:39:39,864   !!
2024-04-19T11:39:39,864     check.warn(importable)
2024-04-19T11:39:39,865   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.cython_utils' is absent from the `packages` configuration.
2024-04-19T11:39:39,865   !!

2024-04-19T11:39:39,866           ********************************************************************************
2024-04-19T11:39:39,867           ############################
2024-04-19T11:39:39,867           # Package would be ignored #
2024-04-19T11:39:39,867           ############################
2024-04-19T11:39:39,868           Python recognizes 'moleculekit.cython_utils' as an importable package[^1],
2024-04-19T11:39:39,868           but it is absent from setuptools' `packages` configuration.

2024-04-19T11:39:39,869           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-19T11:39:39,869           package, please make sure that 'moleculekit.cython_utils' is explicitly added
2024-04-19T11:39:39,870           to the `packages` configuration field.

2024-04-19T11:39:39,870           Alternatively, you can also rely on setuptools' discovery methods
2024-04-19T11:39:39,871           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-19T11:39:39,871           instead of `find_packages(...)`/`find:`).

2024-04-19T11:39:39,872           You can read more about "package discovery" on setuptools documentation page:

2024-04-19T11:39:39,873           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-19T11:39:39,873           If you don't want 'moleculekit.cython_utils' to be distributed and are
2024-04-19T11:39:39,874           already explicitly excluding 'moleculekit.cython_utils' via
2024-04-19T11:39:39,874           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-19T11:39:39,875           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-19T11:39:39,875           combination with a more fine grained `package-data` configuration.

2024-04-19T11:39:39,876           You can read more about "package data files" on setuptools documentation page:

2024-04-19T11:39:39,878           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-19T11:39:39,879           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-19T11:39:39,880                 even if it does not contain any `.py` files.
2024-04-19T11:39:39,880                 On the other hand, currently there is no concept of package data
2024-04-19T11:39:39,881                 directory, all directories are treated like packages.
2024-04-19T11:39:39,882           ********************************************************************************

2024-04-19T11:39:39,883   !!
2024-04-19T11:39:39,883     check.warn(importable)
2024-04-19T11:39:39,884   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.distance_utils' is absent from the `packages` configuration.
2024-04-19T11:39:39,885   !!

2024-04-19T11:39:39,885           ********************************************************************************
2024-04-19T11:39:39,886           ############################
2024-04-19T11:39:39,886           # Package would be ignored #
2024-04-19T11:39:39,887           ############################
2024-04-19T11:39:39,887           Python recognizes 'moleculekit.distance_utils' as an importable package[^1],
2024-04-19T11:39:39,888           but it is absent from setuptools' `packages` configuration.

2024-04-19T11:39:39,889           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-19T11:39:39,889           package, please make sure that 'moleculekit.distance_utils' is explicitly added
2024-04-19T11:39:39,890           to the `packages` configuration field.

2024-04-19T11:39:39,891           Alternatively, you can also rely on setuptools' discovery methods
2024-04-19T11:39:39,892           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-19T11:39:39,892           instead of `find_packages(...)`/`find:`).

2024-04-19T11:39:39,893           You can read more about "package discovery" on setuptools documentation page:

2024-04-19T11:39:39,894           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-19T11:39:39,895           If you don't want 'moleculekit.distance_utils' to be distributed and are
2024-04-19T11:39:39,895           already explicitly excluding 'moleculekit.distance_utils' via
2024-04-19T11:39:39,896           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-19T11:39:39,896           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-19T11:39:39,896           combination with a more fine grained `package-data` configuration.

2024-04-19T11:39:39,897           You can read more about "package data files" on setuptools documentation page:

2024-04-19T11:39:39,898           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-19T11:39:39,899           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-19T11:39:39,899                 even if it does not contain any `.py` files.
2024-04-19T11:39:39,900                 On the other hand, currently there is no concept of package data
2024-04-19T11:39:39,900                 directory, all directories are treated like packages.
2024-04-19T11:39:39,900           ********************************************************************************

2024-04-19T11:39:39,901   !!
2024-04-19T11:39:39,902     check.warn(importable)
2024-04-19T11:39:39,902   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.fileformats.binpos' is absent from the `packages` configuration.
2024-04-19T11:39:39,902   !!

2024-04-19T11:39:39,903           ********************************************************************************
2024-04-19T11:39:39,904           ############################
2024-04-19T11:39:39,904           # Package would be ignored #
2024-04-19T11:39:39,905           ############################
2024-04-19T11:39:39,906           Python recognizes 'moleculekit.fileformats.binpos' as an importable package[^1],
2024-04-19T11:39:39,906           but it is absent from setuptools' `packages` configuration.

2024-04-19T11:39:39,907           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-19T11:39:39,908           package, please make sure that 'moleculekit.fileformats.binpos' is explicitly added
2024-04-19T11:39:39,908           to the `packages` configuration field.

2024-04-19T11:39:39,910           Alternatively, you can also rely on setuptools' discovery methods
2024-04-19T11:39:39,910           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-19T11:39:39,911           instead of `find_packages(...)`/`find:`).

2024-04-19T11:39:39,912           You can read more about "package discovery" on setuptools documentation page:

2024-04-19T11:39:39,912           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-19T11:39:39,913           If you don't want 'moleculekit.fileformats.binpos' to be distributed and are
2024-04-19T11:39:39,914           already explicitly excluding 'moleculekit.fileformats.binpos' via
2024-04-19T11:39:39,914           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-19T11:39:39,915           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-19T11:39:39,915           combination with a more fine grained `package-data` configuration.

2024-04-19T11:39:39,916           You can read more about "package data files" on setuptools documentation page:

2024-04-19T11:39:39,917           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-19T11:39:39,919           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-19T11:39:39,920                 even if it does not contain any `.py` files.
2024-04-19T11:39:39,920                 On the other hand, currently there is no concept of package data
2024-04-19T11:39:39,921                 directory, all directories are treated like packages.
2024-04-19T11:39:39,922           ********************************************************************************

2024-04-19T11:39:39,922   !!
2024-04-19T11:39:39,923     check.warn(importable)
2024-04-19T11:39:39,923   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.fileformats.binpos.include' is absent from the `packages` configuration.
2024-04-19T11:39:39,923   !!

2024-04-19T11:39:39,924           ********************************************************************************
2024-04-19T11:39:39,924           ############################
2024-04-19T11:39:39,925           # Package would be ignored #
2024-04-19T11:39:39,925           ############################
2024-04-19T11:39:39,925           Python recognizes 'moleculekit.fileformats.binpos.include' as an importable package[^1],
2024-04-19T11:39:39,926           but it is absent from setuptools' `packages` configuration.

2024-04-19T11:39:39,927           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-19T11:39:39,927           package, please make sure that 'moleculekit.fileformats.binpos.include' is explicitly added
2024-04-19T11:39:39,927           to the `packages` configuration field.

2024-04-19T11:39:39,928           Alternatively, you can also rely on setuptools' discovery methods
2024-04-19T11:39:39,929           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-19T11:39:39,929           instead of `find_packages(...)`/`find:`).

2024-04-19T11:39:39,930           You can read more about "package discovery" on setuptools documentation page:

2024-04-19T11:39:39,931           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-19T11:39:39,932           If you don't want 'moleculekit.fileformats.binpos.include' to be distributed and are
2024-04-19T11:39:39,933           already explicitly excluding 'moleculekit.fileformats.binpos.include' via
2024-04-19T11:39:39,933           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-19T11:39:39,934           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-19T11:39:39,934           combination with a more fine grained `package-data` configuration.

2024-04-19T11:39:39,935           You can read more about "package data files" on setuptools documentation page:

2024-04-19T11:39:39,936           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-19T11:39:39,938           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-19T11:39:39,938                 even if it does not contain any `.py` files.
2024-04-19T11:39:39,939                 On the other hand, currently there is no concept of package data
2024-04-19T11:39:39,939                 directory, all directories are treated like packages.
2024-04-19T11:39:39,940           ********************************************************************************

2024-04-19T11:39:39,941   !!
2024-04-19T11:39:39,941     check.warn(importable)
2024-04-19T11:39:39,941   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.fileformats.binpos.src' is absent from the `packages` configuration.
2024-04-19T11:39:39,942   !!

2024-04-19T11:39:39,943           ********************************************************************************
2024-04-19T11:39:39,943           ############################
2024-04-19T11:39:39,944           # Package would be ignored #
2024-04-19T11:39:39,944           ############################
2024-04-19T11:39:39,945           Python recognizes 'moleculekit.fileformats.binpos.src' as an importable package[^1],
2024-04-19T11:39:39,945           but it is absent from setuptools' `packages` configuration.

2024-04-19T11:39:39,947           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-19T11:39:39,947           package, please make sure that 'moleculekit.fileformats.binpos.src' is explicitly added
2024-04-19T11:39:39,947           to the `packages` configuration field.

2024-04-19T11:39:39,948           Alternatively, you can also rely on setuptools' discovery methods
2024-04-19T11:39:39,948           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-19T11:39:39,949           instead of `find_packages(...)`/`find:`).

2024-04-19T11:39:39,949           You can read more about "package discovery" on setuptools documentation page:

2024-04-19T11:39:39,950           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-19T11:39:39,951           If you don't want 'moleculekit.fileformats.binpos.src' to be distributed and are
2024-04-19T11:39:39,951           already explicitly excluding 'moleculekit.fileformats.binpos.src' via
2024-04-19T11:39:39,951           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-19T11:39:39,952           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-19T11:39:39,952           combination with a more fine grained `package-data` configuration.

2024-04-19T11:39:39,953           You can read more about "package data files" on setuptools documentation page:

2024-04-19T11:39:39,954           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-19T11:39:39,955           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-19T11:39:39,955                 even if it does not contain any `.py` files.
2024-04-19T11:39:39,955                 On the other hand, currently there is no concept of package data
2024-04-19T11:39:39,956                 directory, all directories are treated like packages.
2024-04-19T11:39:39,956           ********************************************************************************

2024-04-19T11:39:39,957   !!
2024-04-19T11:39:39,958     check.warn(importable)
2024-04-19T11:39:39,958   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.fileformats.dcd' is absent from the `packages` configuration.
2024-04-19T11:39:39,959   !!

2024-04-19T11:39:39,960           ********************************************************************************
2024-04-19T11:39:39,960           ############################
2024-04-19T11:39:39,961           # Package would be ignored #
2024-04-19T11:39:39,961           ############################
2024-04-19T11:39:39,962           Python recognizes 'moleculekit.fileformats.dcd' as an importable package[^1],
2024-04-19T11:39:39,962           but it is absent from setuptools' `packages` configuration.

2024-04-19T11:39:39,963           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-19T11:39:39,964           package, please make sure that 'moleculekit.fileformats.dcd' is explicitly added
2024-04-19T11:39:39,964           to the `packages` configuration field.

2024-04-19T11:39:39,965           Alternatively, you can also rely on setuptools' discovery methods
2024-04-19T11:39:39,966           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-19T11:39:39,966           instead of `find_packages(...)`/`find:`).

2024-04-19T11:39:39,967           You can read more about "package discovery" on setuptools documentation page:

2024-04-19T11:39:39,968           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-19T11:39:39,969           If you don't want 'moleculekit.fileformats.dcd' to be distributed and are
2024-04-19T11:39:39,970           already explicitly excluding 'moleculekit.fileformats.dcd' via
2024-04-19T11:39:39,970           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-19T11:39:39,971           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-19T11:39:39,972           combination with a more fine grained `package-data` configuration.

2024-04-19T11:39:39,972           You can read more about "package data files" on setuptools documentation page:

2024-04-19T11:39:39,973           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-19T11:39:39,974           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-19T11:39:39,974                 even if it does not contain any `.py` files.
2024-04-19T11:39:39,975                 On the other hand, currently there is no concept of package data
2024-04-19T11:39:39,975                 directory, all directories are treated like packages.
2024-04-19T11:39:39,975           ********************************************************************************

2024-04-19T11:39:39,976   !!
2024-04-19T11:39:39,976     check.warn(importable)
2024-04-19T11:39:39,977   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.fileformats.dcd.include' is absent from the `packages` configuration.
2024-04-19T11:39:39,977   !!

2024-04-19T11:39:39,978           ********************************************************************************
2024-04-19T11:39:39,978           ############################
2024-04-19T11:39:39,979           # Package would be ignored #
2024-04-19T11:39:39,979           ############################
2024-04-19T11:39:39,979           Python recognizes 'moleculekit.fileformats.dcd.include' as an importable package[^1],
2024-04-19T11:39:39,980           but it is absent from setuptools' `packages` configuration.

2024-04-19T11:39:39,981           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-19T11:39:39,982           package, please make sure that 'moleculekit.fileformats.dcd.include' is explicitly added
2024-04-19T11:39:39,982           to the `packages` configuration field.

2024-04-19T11:39:39,983           Alternatively, you can also rely on setuptools' discovery methods
2024-04-19T11:39:39,983           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-19T11:39:39,984           instead of `find_packages(...)`/`find:`).

2024-04-19T11:39:39,985           You can read more about "package discovery" on setuptools documentation page:

2024-04-19T11:39:39,986           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-19T11:39:39,987           If you don't want 'moleculekit.fileformats.dcd.include' to be distributed and are
2024-04-19T11:39:39,988           already explicitly excluding 'moleculekit.fileformats.dcd.include' via
2024-04-19T11:39:39,988           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-19T11:39:39,989           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-19T11:39:39,990           combination with a more fine grained `package-data` configuration.

2024-04-19T11:39:39,991           You can read more about "package data files" on setuptools documentation page:

2024-04-19T11:39:39,992           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-19T11:39:39,993           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-19T11:39:39,994                 even if it does not contain any `.py` files.
2024-04-19T11:39:39,994                 On the other hand, currently there is no concept of package data
2024-04-19T11:39:39,995                 directory, all directories are treated like packages.
2024-04-19T11:39:39,995           ********************************************************************************

2024-04-19T11:39:39,996   !!
2024-04-19T11:39:39,997     check.warn(importable)
2024-04-19T11:39:39,998   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.fileformats.dcd.src' is absent from the `packages` configuration.
2024-04-19T11:39:39,998   !!

2024-04-19T11:39:39,999           ********************************************************************************
2024-04-19T11:39:40,000           ############################
2024-04-19T11:39:40,000           # Package would be ignored #
2024-04-19T11:39:40,001           ############################
2024-04-19T11:39:40,001           Python recognizes 'moleculekit.fileformats.dcd.src' as an importable package[^1],
2024-04-19T11:39:40,001           but it is absent from setuptools' `packages` configuration.

2024-04-19T11:39:40,002           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-19T11:39:40,003           package, please make sure that 'moleculekit.fileformats.dcd.src' is explicitly added
2024-04-19T11:39:40,003           to the `packages` configuration field.

2024-04-19T11:39:40,004           Alternatively, you can also rely on setuptools' discovery methods
2024-04-19T11:39:40,005           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-19T11:39:40,005           instead of `find_packages(...)`/`find:`).

2024-04-19T11:39:40,006           You can read more about "package discovery" on setuptools documentation page:

2024-04-19T11:39:40,007           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-19T11:39:40,008           If you don't want 'moleculekit.fileformats.dcd.src' to be distributed and are
2024-04-19T11:39:40,008           already explicitly excluding 'moleculekit.fileformats.dcd.src' via
2024-04-19T11:39:40,009           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-19T11:39:40,009           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-19T11:39:40,010           combination with a more fine grained `package-data` configuration.

2024-04-19T11:39:40,011           You can read more about "package data files" on setuptools documentation page:

2024-04-19T11:39:40,012           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-19T11:39:40,013           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-19T11:39:40,014                 even if it does not contain any `.py` files.
2024-04-19T11:39:40,014                 On the other hand, currently there is no concept of package data
2024-04-19T11:39:40,015                 directory, all directories are treated like packages.
2024-04-19T11:39:40,015           ********************************************************************************

2024-04-19T11:39:40,017   !!
2024-04-19T11:39:40,017     check.warn(importable)
2024-04-19T11:39:40,018   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.fileformats.xtc' is absent from the `packages` configuration.
2024-04-19T11:39:40,019   !!

2024-04-19T11:39:40,021           ********************************************************************************
2024-04-19T11:39:40,021           ############################
2024-04-19T11:39:40,022           # Package would be ignored #
2024-04-19T11:39:40,023           ############################
2024-04-19T11:39:40,023           Python recognizes 'moleculekit.fileformats.xtc' as an importable package[^1],
2024-04-19T11:39:40,024           but it is absent from setuptools' `packages` configuration.

2024-04-19T11:39:40,025           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-19T11:39:40,026           package, please make sure that 'moleculekit.fileformats.xtc' is explicitly added
2024-04-19T11:39:40,026           to the `packages` configuration field.

2024-04-19T11:39:40,027           Alternatively, you can also rely on setuptools' discovery methods
2024-04-19T11:39:40,028           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-19T11:39:40,029           instead of `find_packages(...)`/`find:`).

2024-04-19T11:39:40,030           You can read more about "package discovery" on setuptools documentation page:

2024-04-19T11:39:40,031           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-19T11:39:40,032           If you don't want 'moleculekit.fileformats.xtc' to be distributed and are
2024-04-19T11:39:40,033           already explicitly excluding 'moleculekit.fileformats.xtc' via
2024-04-19T11:39:40,033           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-19T11:39:40,034           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-19T11:39:40,034           combination with a more fine grained `package-data` configuration.

2024-04-19T11:39:40,035           You can read more about "package data files" on setuptools documentation page:

2024-04-19T11:39:40,036           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-19T11:39:40,038           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-19T11:39:40,038                 even if it does not contain any `.py` files.
2024-04-19T11:39:40,039                 On the other hand, currently there is no concept of package data
2024-04-19T11:39:40,045                 directory, all directories are treated like packages.
2024-04-19T11:39:40,046           ********************************************************************************

2024-04-19T11:39:40,047   !!
2024-04-19T11:39:40,047     check.warn(importable)
2024-04-19T11:39:40,047   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.fileformats.xtc.include' is absent from the `packages` configuration.
2024-04-19T11:39:40,048   !!

2024-04-19T11:39:40,049           ********************************************************************************
2024-04-19T11:39:40,049           ############################
2024-04-19T11:39:40,050           # Package would be ignored #
2024-04-19T11:39:40,050           ############################
2024-04-19T11:39:40,051           Python recognizes 'moleculekit.fileformats.xtc.include' as an importable package[^1],
2024-04-19T11:39:40,051           but it is absent from setuptools' `packages` configuration.

2024-04-19T11:39:40,052           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-19T11:39:40,053           package, please make sure that 'moleculekit.fileformats.xtc.include' is explicitly added
2024-04-19T11:39:40,054           to the `packages` configuration field.

2024-04-19T11:39:40,055           Alternatively, you can also rely on setuptools' discovery methods
2024-04-19T11:39:40,055           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-19T11:39:40,056           instead of `find_packages(...)`/`find:`).

2024-04-19T11:39:40,057           You can read more about "package discovery" on setuptools documentation page:

2024-04-19T11:39:40,058           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-19T11:39:40,059           If you don't want 'moleculekit.fileformats.xtc.include' to be distributed and are
2024-04-19T11:39:40,060           already explicitly excluding 'moleculekit.fileformats.xtc.include' via
2024-04-19T11:39:40,061           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-19T11:39:40,061           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-19T11:39:40,063           combination with a more fine grained `package-data` configuration.

2024-04-19T11:39:40,065           You can read more about "package data files" on setuptools documentation page:

2024-04-19T11:39:40,067           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-19T11:39:40,070           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-19T11:39:40,074                 even if it does not contain any `.py` files.
2024-04-19T11:39:40,075                 On the other hand, currently there is no concept of package data
2024-04-19T11:39:40,076                 directory, all directories are treated like packages.
2024-04-19T11:39:40,076           ********************************************************************************

2024-04-19T11:39:40,077   !!
2024-04-19T11:39:40,077     check.warn(importable)
2024-04-19T11:39:40,078   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.fileformats.xtc.src' is absent from the `packages` configuration.
2024-04-19T11:39:40,078   !!

2024-04-19T11:39:40,079           ********************************************************************************
2024-04-19T11:39:40,079           ############################
2024-04-19T11:39:40,080           # Package would be ignored #
2024-04-19T11:39:40,088           ############################
2024-04-19T11:39:40,090           Python recognizes 'moleculekit.fileformats.xtc.src' as an importable package[^1],
2024-04-19T11:39:40,094           but it is absent from setuptools' `packages` configuration.

2024-04-19T11:39:40,098           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-19T11:39:40,099           package, please make sure that 'moleculekit.fileformats.xtc.src' is explicitly added
2024-04-19T11:39:40,099           to the `packages` configuration field.

2024-04-19T11:39:40,100           Alternatively, you can also rely on setuptools' discovery methods
2024-04-19T11:39:40,101           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-19T11:39:40,101           instead of `find_packages(...)`/`find:`).

2024-04-19T11:39:40,102           You can read more about "package discovery" on setuptools documentation page:

2024-04-19T11:39:40,104           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-19T11:39:40,108           If you don't want 'moleculekit.fileformats.xtc.src' to be distributed and are
2024-04-19T11:39:40,109           already explicitly excluding 'moleculekit.fileformats.xtc.src' via
2024-04-19T11:39:40,110           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-19T11:39:40,111           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-19T11:39:40,115           combination with a more fine grained `package-data` configuration.

2024-04-19T11:39:40,124           You can read more about "package data files" on setuptools documentation page:

2024-04-19T11:39:40,126           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-19T11:39:40,127           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-19T11:39:40,128                 even if it does not contain any `.py` files.
2024-04-19T11:39:40,129                 On the other hand, currently there is no concept of package data
2024-04-19T11:39:40,129                 directory, all directories are treated like packages.
2024-04-19T11:39:40,130           ********************************************************************************

2024-04-19T11:39:40,131   !!
2024-04-19T11:39:40,132     check.warn(importable)
2024-04-19T11:39:40,132   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.interactions.cationpi' is absent from the `packages` configuration.
2024-04-19T11:39:40,133   !!

2024-04-19T11:39:40,138           ********************************************************************************
2024-04-19T11:39:40,139           ############################
2024-04-19T11:39:40,139           # Package would be ignored #
2024-04-19T11:39:40,140           ############################
2024-04-19T11:39:40,141           Python recognizes 'moleculekit.interactions.cationpi' as an importable package[^1],
2024-04-19T11:39:40,141           but it is absent from setuptools' `packages` configuration.

2024-04-19T11:39:40,143           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-19T11:39:40,144           package, please make sure that 'moleculekit.interactions.cationpi' is explicitly added
2024-04-19T11:39:40,144           to the `packages` configuration field.

2024-04-19T11:39:40,151           Alternatively, you can also rely on setuptools' discovery methods
2024-04-19T11:39:40,153           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-19T11:39:40,155           instead of `find_packages(...)`/`find:`).

2024-04-19T11:39:40,156           You can read more about "package discovery" on setuptools documentation page:

2024-04-19T11:39:40,157           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-19T11:39:40,158           If you don't want 'moleculekit.interactions.cationpi' to be distributed and are
2024-04-19T11:39:40,158           already explicitly excluding 'moleculekit.interactions.cationpi' via
2024-04-19T11:39:40,159           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-19T11:39:40,159           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-19T11:39:40,159           combination with a more fine grained `package-data` configuration.

2024-04-19T11:39:40,160           You can read more about "package data files" on setuptools documentation page:

2024-04-19T11:39:40,161           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-19T11:39:40,163           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-19T11:39:40,163                 even if it does not contain any `.py` files.
2024-04-19T11:39:40,163                 On the other hand, currently there is no concept of package data
2024-04-19T11:39:40,164                 directory, all directories are treated like packages.
2024-04-19T11:39:40,164           ********************************************************************************

2024-04-19T11:39:40,165   !!
2024-04-19T11:39:40,166     check.warn(importable)
2024-04-19T11:39:40,167   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.interactions.hbonds' is absent from the `packages` configuration.
2024-04-19T11:39:40,167   !!

2024-04-19T11:39:40,169           ********************************************************************************
2024-04-19T11:39:40,169           ############################
2024-04-19T11:39:40,170           # Package would be ignored #
2024-04-19T11:39:40,171           ############################
2024-04-19T11:39:40,171           Python recognizes 'moleculekit.interactions.hbonds' as an importable package[^1],
2024-04-19T11:39:40,172           but it is absent from setuptools' `packages` configuration.

2024-04-19T11:39:40,173           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-19T11:39:40,174           package, please make sure that 'moleculekit.interactions.hbonds' is explicitly added
2024-04-19T11:39:40,174           to the `packages` configuration field.

2024-04-19T11:39:40,175           Alternatively, you can also rely on setuptools' discovery methods
2024-04-19T11:39:40,176           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-19T11:39:40,176           instead of `find_packages(...)`/`find:`).

2024-04-19T11:39:40,178           You can read more about "package discovery" on setuptools documentation page:

2024-04-19T11:39:40,179           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-19T11:39:40,180           If you don't want 'moleculekit.interactions.hbonds' to be distributed and are
2024-04-19T11:39:40,181           already explicitly excluding 'moleculekit.interactions.hbonds' via
2024-04-19T11:39:40,181           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-19T11:39:40,182           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-19T11:39:40,183           combination with a more fine grained `package-data` configuration.

2024-04-19T11:39:40,184           You can read more about "package data files" on setuptools documentation page:

2024-04-19T11:39:40,185           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-19T11:39:40,186           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-19T11:39:40,186                 even if it does not contain any `.py` files.
2024-04-19T11:39:40,187                 On the other hand, currently there is no concept of package data
2024-04-19T11:39:40,187                 directory, all directories are treated like packages.
2024-04-19T11:39:40,188           ********************************************************************************

2024-04-19T11:39:40,188   !!
2024-04-19T11:39:40,189     check.warn(importable)
2024-04-19T11:39:40,189   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.interactions.pipi' is absent from the `packages` configuration.
2024-04-19T11:39:40,190   !!

2024-04-19T11:39:40,191           ********************************************************************************
2024-04-19T11:39:40,191           ############################
2024-04-19T11:39:40,192           # Package would be ignored #
2024-04-19T11:39:40,192           ############################
2024-04-19T11:39:40,192           Python recognizes 'moleculekit.interactions.pipi' as an importable package[^1],
2024-04-19T11:39:40,193           but it is absent from setuptools' `packages` configuration.

2024-04-19T11:39:40,194           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-19T11:39:40,195           package, please make sure that 'moleculekit.interactions.pipi' is explicitly added
2024-04-19T11:39:40,195           to the `packages` configuration field.

2024-04-19T11:39:40,197           Alternatively, you can also rely on setuptools' discovery methods
2024-04-19T11:39:40,198           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-19T11:39:40,198           instead of `find_packages(...)`/`find:`).

2024-04-19T11:39:40,200           You can read more about "package discovery" on setuptools documentation page:

2024-04-19T11:39:40,201           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-19T11:39:40,202           If you don't want 'moleculekit.interactions.pipi' to be distributed and are
2024-04-19T11:39:40,203           already explicitly excluding 'moleculekit.interactions.pipi' via
2024-04-19T11:39:40,203           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-19T11:39:40,204           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-19T11:39:40,204           combination with a more fine grained `package-data` configuration.

2024-04-19T11:39:40,205           You can read more about "package data files" on setuptools documentation page:

2024-04-19T11:39:40,206           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-19T11:39:40,208           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-19T11:39:40,209                 even if it does not contain any `.py` files.
2024-04-19T11:39:40,209                 On the other hand, currently there is no concept of package data
2024-04-19T11:39:40,210                 directory, all directories are treated like packages.
2024-04-19T11:39:40,210           ********************************************************************************

2024-04-19T11:39:40,212   !!
2024-04-19T11:39:40,212     check.warn(importable)
2024-04-19T11:39:40,213   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.interactions.sigmahole' is absent from the `packages` configuration.
2024-04-19T11:39:40,214   !!

2024-04-19T11:39:40,215           ********************************************************************************
2024-04-19T11:39:40,215           ############################
2024-04-19T11:39:40,216           # Package would be ignored #
2024-04-19T11:39:40,216           ############################
2024-04-19T11:39:40,217           Python recognizes 'moleculekit.interactions.sigmahole' as an importable package[^1],
2024-04-19T11:39:40,217           but it is absent from setuptools' `packages` configuration.

2024-04-19T11:39:40,218           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-19T11:39:40,218           package, please make sure that 'moleculekit.interactions.sigmahole' is explicitly added
2024-04-19T11:39:40,219           to the `packages` configuration field.

2024-04-19T11:39:40,220           Alternatively, you can also rely on setuptools' discovery methods
2024-04-19T11:39:40,220           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-19T11:39:40,221           instead of `find_packages(...)`/`find:`).

2024-04-19T11:39:40,222           You can read more about "package discovery" on setuptools documentation page:

2024-04-19T11:39:40,223           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-19T11:39:40,225           If you don't want 'moleculekit.interactions.sigmahole' to be distributed and are
2024-04-19T11:39:40,226           already explicitly excluding 'moleculekit.interactions.sigmahole' via
2024-04-19T11:39:40,257           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-19T11:39:40,259           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-19T11:39:40,264           combination with a more fine grained `package-data` configuration.

2024-04-19T11:39:40,309           You can read more about "package data files" on setuptools documentation page:

2024-04-19T11:39:40,363           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-19T11:39:40,369           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-19T11:39:40,369                 even if it does not contain any `.py` files.
2024-04-19T11:39:40,370                 On the other hand, currently there is no concept of package data
2024-04-19T11:39:40,370                 directory, all directories are treated like packages.
2024-04-19T11:39:40,371           ********************************************************************************

2024-04-19T11:39:40,372   !!
2024-04-19T11:39:40,372     check.warn(importable)
2024-04-19T11:39:40,373   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.occupancy_utils' is absent from the `packages` configuration.
2024-04-19T11:39:40,374   !!

2024-04-19T11:39:40,375           ********************************************************************************
2024-04-19T11:39:40,375           ############################
2024-04-19T11:39:40,376           # Package would be ignored #
2024-04-19T11:39:40,376           ############################
2024-04-19T11:39:40,377           Python recognizes 'moleculekit.occupancy_utils' as an importable package[^1],
2024-04-19T11:39:40,378           but it is absent from setuptools' `packages` configuration.

2024-04-19T11:39:40,379           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-19T11:39:40,379           package, please make sure that 'moleculekit.occupancy_utils' is explicitly added
2024-04-19T11:39:40,380           to the `packages` configuration field.

2024-04-19T11:39:40,381           Alternatively, you can also rely on setuptools' discovery methods
2024-04-19T11:39:40,381           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-19T11:39:40,382           instead of `find_packages(...)`/`find:`).

2024-04-19T11:39:40,383           You can read more about "package discovery" on setuptools documentation page:

2024-04-19T11:39:40,384           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-19T11:39:40,385           If you don't want 'moleculekit.occupancy_utils' to be distributed and are
2024-04-19T11:39:40,385           already explicitly excluding 'moleculekit.occupancy_utils' via
2024-04-19T11:39:40,386           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-19T11:39:40,386           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-19T11:39:40,386           combination with a more fine grained `package-data` configuration.

2024-04-19T11:39:40,387           You can read more about "package data files" on setuptools documentation page:

2024-04-19T11:39:40,388           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-19T11:39:40,389           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-19T11:39:40,390                 even if it does not contain any `.py` files.
2024-04-19T11:39:40,390                 On the other hand, currently there is no concept of package data
2024-04-19T11:39:40,391                 directory, all directories are treated like packages.
2024-04-19T11:39:40,391           ********************************************************************************

2024-04-19T11:39:40,392   !!
2024-04-19T11:39:40,393     check.warn(importable)
2024-04-19T11:39:40,393   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.share' is absent from the `packages` configuration.
2024-04-19T11:39:40,393   !!

2024-04-19T11:39:40,394           ********************************************************************************
2024-04-19T11:39:40,395           ############################
2024-04-19T11:39:40,396           # Package would be ignored #
2024-04-19T11:39:40,396           ############################
2024-04-19T11:39:40,397           Python recognizes 'moleculekit.share' as an importable package[^1],
2024-04-19T11:39:40,397           but it is absent from setuptools' `packages` configuration.

2024-04-19T11:39:40,398           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-19T11:39:40,399           package, please make sure that 'moleculekit.share' is explicitly added
2024-04-19T11:39:40,399           to the `packages` configuration field.

2024-04-19T11:39:40,400           Alternatively, you can also rely on setuptools' discovery methods
2024-04-19T11:39:40,401           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-19T11:39:40,401           instead of `find_packages(...)`/`find:`).

2024-04-19T11:39:40,402           You can read more about "package discovery" on setuptools documentation page:

2024-04-19T11:39:40,403           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-19T11:39:40,404           If you don't want 'moleculekit.share' to be distributed and are
2024-04-19T11:39:40,405           already explicitly excluding 'moleculekit.share' via
2024-04-19T11:39:40,405           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-19T11:39:40,406           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-19T11:39:40,406           combination with a more fine grained `package-data` configuration.

2024-04-19T11:39:40,407           You can read more about "package data files" on setuptools documentation page:

2024-04-19T11:39:40,408           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-19T11:39:40,410           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-19T11:39:40,411                 even if it does not contain any `.py` files.
2024-04-19T11:39:40,412                 On the other hand, currently there is no concept of package data
2024-04-19T11:39:40,413                 directory, all directories are treated like packages.
2024-04-19T11:39:40,413           ********************************************************************************

2024-04-19T11:39:40,414   !!
2024-04-19T11:39:40,415     check.warn(importable)
2024-04-19T11:39:40,415   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.share.atomselect' is absent from the `packages` configuration.
2024-04-19T11:39:40,415   !!

2024-04-19T11:39:40,417           ********************************************************************************
2024-04-19T11:39:40,417           ############################
2024-04-19T11:39:40,417           # Package would be ignored #
2024-04-19T11:39:40,418           ############################
2024-04-19T11:39:40,418           Python recognizes 'moleculekit.share.atomselect' as an importable package[^1],
2024-04-19T11:39:40,419           but it is absent from setuptools' `packages` configuration.

2024-04-19T11:39:40,420           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-19T11:39:40,420           package, please make sure that 'moleculekit.share.atomselect' is explicitly added
2024-04-19T11:39:40,421           to the `packages` configuration field.

2024-04-19T11:39:40,422           Alternatively, you can also rely on setuptools' discovery methods
2024-04-19T11:39:40,422           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-19T11:39:40,423           instead of `find_packages(...)`/`find:`).

2024-04-19T11:39:40,424           You can read more about "package discovery" on setuptools documentation page:

2024-04-19T11:39:40,425           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-19T11:39:40,426           If you don't want 'moleculekit.share.atomselect' to be distributed and are
2024-04-19T11:39:40,426           already explicitly excluding 'moleculekit.share.atomselect' via
2024-04-19T11:39:40,427           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-19T11:39:40,427           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-19T11:39:40,428           combination with a more fine grained `package-data` configuration.

2024-04-19T11:39:40,429           You can read more about "package data files" on setuptools documentation page:

2024-04-19T11:39:40,430           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-19T11:39:40,432           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-19T11:39:40,433                 even if it does not contain any `.py` files.
2024-04-19T11:39:40,433                 On the other hand, currently there is no concept of package data
2024-04-19T11:39:40,434                 directory, all directories are treated like packages.
2024-04-19T11:39:40,435           ********************************************************************************

2024-04-19T11:39:40,436   !!
2024-04-19T11:39:40,436     check.warn(importable)
2024-04-19T11:39:40,437   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.share.pdb2pqr.residues' is absent from the `packages` configuration.
2024-04-19T11:39:40,438   !!

2024-04-19T11:39:40,439           ********************************************************************************
2024-04-19T11:39:40,440           ############################
2024-04-19T11:39:40,440           # Package would be ignored #
2024-04-19T11:39:40,441           ############################
2024-04-19T11:39:40,442           Python recognizes 'moleculekit.share.pdb2pqr.residues' as an importable package[^1],
2024-04-19T11:39:40,442           but it is absent from setuptools' `packages` configuration.

2024-04-19T11:39:40,443           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-19T11:39:40,444           package, please make sure that 'moleculekit.share.pdb2pqr.residues' is explicitly added
2024-04-19T11:39:40,445           to the `packages` configuration field.

2024-04-19T11:39:40,446           Alternatively, you can also rely on setuptools' discovery methods
2024-04-19T11:39:40,447           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-19T11:39:40,447           instead of `find_packages(...)`/`find:`).

2024-04-19T11:39:40,448           You can read more about "package discovery" on setuptools documentation page:

2024-04-19T11:39:40,449           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-19T11:39:40,450           If you don't want 'moleculekit.share.pdb2pqr.residues' to be distributed and are
2024-04-19T11:39:40,450           already explicitly excluding 'moleculekit.share.pdb2pqr.residues' via
2024-04-19T11:39:40,451           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-19T11:39:40,451           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-19T11:39:40,452           combination with a more fine grained `package-data` configuration.

2024-04-19T11:39:40,453           You can read more about "package data files" on setuptools documentation page:

2024-04-19T11:39:40,454           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-19T11:39:40,455           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-19T11:39:40,456                 even if it does not contain any `.py` files.
2024-04-19T11:39:40,456                 On the other hand, currently there is no concept of package data
2024-04-19T11:39:40,457                 directory, all directories are treated like packages.
2024-04-19T11:39:40,457           ********************************************************************************

2024-04-19T11:39:40,458   !!
2024-04-19T11:39:40,459     check.warn(importable)
2024-04-19T11:39:40,459   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.tmalign' is absent from the `packages` configuration.
2024-04-19T11:39:40,460   !!

2024-04-19T11:39:40,461           ********************************************************************************
2024-04-19T11:39:40,461           ############################
2024-04-19T11:39:40,462           # Package would be ignored #
2024-04-19T11:39:40,462           ############################
2024-04-19T11:39:40,463           Python recognizes 'moleculekit.tmalign' as an importable package[^1],
2024-04-19T11:39:40,463           but it is absent from setuptools' `packages` configuration.

2024-04-19T11:39:40,464           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-19T11:39:40,465           package, please make sure that 'moleculekit.tmalign' is explicitly added
2024-04-19T11:39:40,465           to the `packages` configuration field.

2024-04-19T11:39:40,466           Alternatively, you can also rely on setuptools' discovery methods
2024-04-19T11:39:40,467           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-19T11:39:40,468           instead of `find_packages(...)`/`find:`).

2024-04-19T11:39:40,469           You can read more about "package discovery" on setuptools documentation page:

2024-04-19T11:39:40,470           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-19T11:39:40,471           If you don't want 'moleculekit.tmalign' to be distributed and are
2024-04-19T11:39:40,472           already explicitly excluding 'moleculekit.tmalign' via
2024-04-19T11:39:40,473           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-19T11:39:40,473           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-19T11:39:40,474           combination with a more fine grained `package-data` configuration.

2024-04-19T11:39:40,475           You can read more about "package data files" on setuptools documentation page:

2024-04-19T11:39:40,476           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-19T11:39:40,478           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-19T11:39:40,478                 even if it does not contain any `.py` files.
2024-04-19T11:39:40,479                 On the other hand, currently there is no concept of package data
2024-04-19T11:39:40,479                 directory, all directories are treated like packages.
2024-04-19T11:39:40,480           ********************************************************************************

2024-04-19T11:39:40,481   !!
2024-04-19T11:39:40,481     check.warn(importable)
2024-04-19T11:39:40,482   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.tmalign.include' is absent from the `packages` configuration.
2024-04-19T11:39:40,482   !!

2024-04-19T11:39:40,483           ********************************************************************************
2024-04-19T11:39:40,484           ############################
2024-04-19T11:39:40,484           # Package would be ignored #
2024-04-19T11:39:40,485           ############################
2024-04-19T11:39:40,486           Python recognizes 'moleculekit.tmalign.include' as an importable package[^1],
2024-04-19T11:39:40,486           but it is absent from setuptools' `packages` configuration.

2024-04-19T11:39:40,487           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-19T11:39:40,488           package, please make sure that 'moleculekit.tmalign.include' is explicitly added
2024-04-19T11:39:40,488           to the `packages` configuration field.

2024-04-19T11:39:40,489           Alternatively, you can also rely on setuptools' discovery methods
2024-04-19T11:39:40,490           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-19T11:39:40,490           instead of `find_packages(...)`/`find:`).

2024-04-19T11:39:40,491           You can read more about "package discovery" on setuptools documentation page:

2024-04-19T11:39:40,493           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-19T11:39:40,494           If you don't want 'moleculekit.tmalign.include' to be distributed and are
2024-04-19T11:39:40,494           already explicitly excluding 'moleculekit.tmalign.include' via
2024-04-19T11:39:40,495           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-19T11:39:40,495           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-19T11:39:40,496           combination with a more fine grained `package-data` configuration.

2024-04-19T11:39:40,497           You can read more about "package data files" on setuptools documentation page:

2024-04-19T11:39:40,498           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-19T11:39:40,500           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-19T11:39:40,501                 even if it does not contain any `.py` files.
2024-04-19T11:39:40,501                 On the other hand, currently there is no concept of package data
2024-04-19T11:39:40,502                 directory, all directories are treated like packages.
2024-04-19T11:39:40,502           ********************************************************************************

2024-04-19T11:39:40,504   !!
2024-04-19T11:39:40,504     check.warn(importable)
2024-04-19T11:39:40,505   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.tmalign.src' is absent from the `packages` configuration.
2024-04-19T11:39:40,505   !!

2024-04-19T11:39:40,506           ********************************************************************************
2024-04-19T11:39:40,507           ############################
2024-04-19T11:39:40,508           # Package would be ignored #
2024-04-19T11:39:40,508           ############################
2024-04-19T11:39:40,509           Python recognizes 'moleculekit.tmalign.src' as an importable package[^1],
2024-04-19T11:39:40,509           but it is absent from setuptools' `packages` configuration.

2024-04-19T11:39:40,510           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-19T11:39:40,511           package, please make sure that 'moleculekit.tmalign.src' is explicitly added
2024-04-19T11:39:40,511           to the `packages` configuration field.

2024-04-19T11:39:40,512           Alternatively, you can also rely on setuptools' discovery methods
2024-04-19T11:39:40,512           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-19T11:39:40,513           instead of `find_packages(...)`/`find:`).

2024-04-19T11:39:40,514           You can read more about "package discovery" on setuptools documentation page:

2024-04-19T11:39:40,515           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-19T11:39:40,515           If you don't want 'moleculekit.tmalign.src' to be distributed and are
2024-04-19T11:39:40,516           already explicitly excluding 'moleculekit.tmalign.src' via
2024-04-19T11:39:40,517           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-19T11:39:40,517           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-19T11:39:40,517           combination with a more fine grained `package-data` configuration.

2024-04-19T11:39:40,518           You can read more about "package data files" on setuptools documentation page:

2024-04-19T11:39:40,519           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-19T11:39:40,521           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-19T11:39:40,521                 even if it does not contain any `.py` files.
2024-04-19T11:39:40,522                 On the other hand, currently there is no concept of package data
2024-04-19T11:39:40,523                 directory, all directories are treated like packages.
2024-04-19T11:39:40,523           ********************************************************************************

2024-04-19T11:39:40,524   !!
2024-04-19T11:39:40,525     check.warn(importable)
2024-04-19T11:39:40,525   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'moleculekit.wrapping' is absent from the `packages` configuration.
2024-04-19T11:39:40,526   !!

2024-04-19T11:39:40,527           ********************************************************************************
2024-04-19T11:39:40,528           ############################
2024-04-19T11:39:40,528           # Package would be ignored #
2024-04-19T11:39:40,529           ############################
2024-04-19T11:39:40,529           Python recognizes 'moleculekit.wrapping' as an importable package[^1],
2024-04-19T11:39:40,530           but it is absent from setuptools' `packages` configuration.

2024-04-19T11:39:40,531           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-19T11:39:40,532           package, please make sure that 'moleculekit.wrapping' is explicitly added
2024-04-19T11:39:40,532           to the `packages` configuration field.

2024-04-19T11:39:40,533           Alternatively, you can also rely on setuptools' discovery methods
2024-04-19T11:39:40,534           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-19T11:39:40,534           instead of `find_packages(...)`/`find:`).

2024-04-19T11:39:40,536           You can read more about "package discovery" on setuptools documentation page:

2024-04-19T11:39:40,537           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-19T11:39:40,539           If you don't want 'moleculekit.wrapping' to be distributed and are
2024-04-19T11:39:40,539           already explicitly excluding 'moleculekit.wrapping' via
2024-04-19T11:39:40,540           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-19T11:39:40,540           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-19T11:39:40,540           combination with a more fine grained `package-data` configuration.

2024-04-19T11:39:40,541           You can read more about "package data files" on setuptools documentation page:

2024-04-19T11:39:40,542           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-19T11:39:40,544           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-19T11:39:40,544                 even if it does not contain any `.py` files.
2024-04-19T11:39:40,544                 On the other hand, currently there is no concept of package data
2024-04-19T11:39:40,545                 directory, all directories are treated like packages.
2024-04-19T11:39:40,545           ********************************************************************************

2024-04-19T11:39:40,546   !!
2024-04-19T11:39:40,547     check.warn(importable)
2024-04-19T11:39:40,547   copying moleculekit/logging.ini -> build/lib.linux-armv7l-cpython-311/moleculekit
2024-04-19T11:39:40,548   copying moleculekit/vmd_wrapper -> build/lib.linux-armv7l-cpython-311/moleculekit
2024-04-19T11:39:40,548   creating build/lib.linux-armv7l-cpython-311/moleculekit/atomselect_utils
2024-04-19T11:39:40,549   copying moleculekit/atomselect_utils/atomselect_utils.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/atomselect_utils
2024-04-19T11:39:40,550   copying moleculekit/atomselect_utils/atomselect_utils.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/atomselect_utils
2024-04-19T11:39:40,550   creating build/lib.linux-armv7l-cpython-311/moleculekit/bondguesser_utils
2024-04-19T11:39:40,551   copying moleculekit/bondguesser_utils/bondguesser_utils.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/bondguesser_utils
2024-04-19T11:39:40,551   copying moleculekit/bondguesser_utils/bondguesser_utils.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/bondguesser_utils
2024-04-19T11:39:40,552   creating build/lib.linux-armv7l-cpython-311/moleculekit/cython_utils
2024-04-19T11:39:40,552   copying moleculekit/cython_utils/cython_utils.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/cython_utils
2024-04-19T11:39:40,553   copying moleculekit/cython_utils/cython_utils.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/cython_utils
2024-04-19T11:39:40,553   creating build/lib.linux-armv7l-cpython-311/moleculekit/distance_utils
2024-04-19T11:39:40,554   copying moleculekit/distance_utils/distance_utils.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/distance_utils
2024-04-19T11:39:40,554   copying moleculekit/distance_utils/distance_utils.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/distance_utils
2024-04-19T11:39:40,555   creating build/lib.linux-armv7l-cpython-311/moleculekit/occupancy_utils
2024-04-19T11:39:40,556   copying moleculekit/occupancy_utils/occupancy_utils.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/occupancy_utils
2024-04-19T11:39:40,556   copying moleculekit/occupancy_utils/occupancy_utils.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/occupancy_utils
2024-04-19T11:39:40,557   creating build/lib.linux-armv7l-cpython-311/moleculekit/share
2024-04-19T11:39:40,557   copying moleculekit/share/ALA.cif -> build/lib.linux-armv7l-cpython-311/moleculekit/share
2024-04-19T11:39:40,558   copying moleculekit/share/backbone.cif -> build/lib.linux-armv7l-cpython-311/moleculekit/share
2024-04-19T11:39:40,558   copying moleculekit/share/opm_sequences.json -> build/lib.linux-armv7l-cpython-311/moleculekit/share
2024-04-19T11:39:40,559   creating build/lib.linux-armv7l-cpython-311/moleculekit/share/atomselect
2024-04-19T11:39:40,560   copying moleculekit/share/atomselect/atomselect.json -> build/lib.linux-armv7l-cpython-311/moleculekit/share/atomselect
2024-04-19T11:39:40,560   creating build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr
2024-04-19T11:39:40,561   creating build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,561   copying moleculekit/share/pdb2pqr/residues/.gitkeep -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,562   copying moleculekit/share/pdb2pqr/residues/004.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,562   copying moleculekit/share/pdb2pqr/residues/004.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,563   copying moleculekit/share/pdb2pqr/residues/03Y.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,563   copying moleculekit/share/pdb2pqr/residues/03Y.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,564   copying moleculekit/share/pdb2pqr/residues/0A1.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,564   copying moleculekit/share/pdb2pqr/residues/0A1.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,565   copying moleculekit/share/pdb2pqr/residues/0AF.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,565   copying moleculekit/share/pdb2pqr/residues/0AF.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,566   copying moleculekit/share/pdb2pqr/residues/0BN.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,566   copying moleculekit/share/pdb2pqr/residues/0BN.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,567   copying moleculekit/share/pdb2pqr/residues/1MH.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,567   copying moleculekit/share/pdb2pqr/residues/1MH.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,568   copying moleculekit/share/pdb2pqr/residues/2AS.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,569   copying moleculekit/share/pdb2pqr/residues/2AS.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,569   copying moleculekit/share/pdb2pqr/residues/2GX.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,570   copying moleculekit/share/pdb2pqr/residues/2GX.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,570   copying moleculekit/share/pdb2pqr/residues/2ML.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,571   copying moleculekit/share/pdb2pqr/residues/2ML.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,572   copying moleculekit/share/pdb2pqr/residues/2MR.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,572   copying moleculekit/share/pdb2pqr/residues/2MR.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,573   copying moleculekit/share/pdb2pqr/residues/4IN.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,573   copying moleculekit/share/pdb2pqr/residues/4IN.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,574   copying moleculekit/share/pdb2pqr/residues/4PH.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,574   copying moleculekit/share/pdb2pqr/residues/4PH.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,575   copying moleculekit/share/pdb2pqr/residues/4PQ.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,575   copying moleculekit/share/pdb2pqr/residues/4PQ.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,576   copying moleculekit/share/pdb2pqr/residues/5JP.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,577   copying moleculekit/share/pdb2pqr/residues/5JP.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,577   copying moleculekit/share/pdb2pqr/residues/AA4.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,578   copying moleculekit/share/pdb2pqr/residues/AA4.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,578   copying moleculekit/share/pdb2pqr/residues/ABA.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,579   copying moleculekit/share/pdb2pqr/residues/ABA.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,579   copying moleculekit/share/pdb2pqr/residues/AHP.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,580   copying moleculekit/share/pdb2pqr/residues/AHP.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,580   copying moleculekit/share/pdb2pqr/residues/ALC.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,581   copying moleculekit/share/pdb2pqr/residues/ALC.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,581   copying moleculekit/share/pdb2pqr/residues/ALN.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,582   copying moleculekit/share/pdb2pqr/residues/ALN.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,582   copying moleculekit/share/pdb2pqr/residues/ALY.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,583   copying moleculekit/share/pdb2pqr/residues/ALY.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,583   copying moleculekit/share/pdb2pqr/residues/APD.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,584   copying moleculekit/share/pdb2pqr/residues/APD.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,584   copying moleculekit/share/pdb2pqr/residues/BB8.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,585   copying moleculekit/share/pdb2pqr/residues/BB8.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,585   copying moleculekit/share/pdb2pqr/residues/BCS.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,586   copying moleculekit/share/pdb2pqr/residues/BCS.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,587   copying moleculekit/share/pdb2pqr/residues/BTK.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,588   copying moleculekit/share/pdb2pqr/residues/BTK.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,588   copying moleculekit/share/pdb2pqr/residues/CCS.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,589   copying moleculekit/share/pdb2pqr/residues/CCS.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,589   copying moleculekit/share/pdb2pqr/residues/CGU.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,590   copying moleculekit/share/pdb2pqr/residues/CGU.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,591   copying moleculekit/share/pdb2pqr/residues/CSA.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,591   copying moleculekit/share/pdb2pqr/residues/CSA.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,592   copying moleculekit/share/pdb2pqr/residues/CSO.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,592   copying moleculekit/share/pdb2pqr/residues/CSO.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,593   copying moleculekit/share/pdb2pqr/residues/CSP.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,593   copying moleculekit/share/pdb2pqr/residues/CSP.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,594   copying moleculekit/share/pdb2pqr/residues/CSS.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,594   copying moleculekit/share/pdb2pqr/residues/CSS.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,595   copying moleculekit/share/pdb2pqr/residues/D4P.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,595   copying moleculekit/share/pdb2pqr/residues/D4P.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,596   copying moleculekit/share/pdb2pqr/residues/DA2.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,596   copying moleculekit/share/pdb2pqr/residues/DA2.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,597   copying moleculekit/share/pdb2pqr/residues/DAB.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,598   copying moleculekit/share/pdb2pqr/residues/DAB.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,598   copying moleculekit/share/pdb2pqr/residues/DAH.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,599   copying moleculekit/share/pdb2pqr/residues/DAH.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,599   copying moleculekit/share/pdb2pqr/residues/DPP.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,600   copying moleculekit/share/pdb2pqr/residues/DPP.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,600   copying moleculekit/share/pdb2pqr/residues/ESC.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,601   copying moleculekit/share/pdb2pqr/residues/ESC.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,602   copying moleculekit/share/pdb2pqr/residues/FGL.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,602   copying moleculekit/share/pdb2pqr/residues/FGL.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,603   copying moleculekit/share/pdb2pqr/residues/GHG.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,604   copying moleculekit/share/pdb2pqr/residues/GHG.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,604   copying moleculekit/share/pdb2pqr/residues/GME.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,605   copying moleculekit/share/pdb2pqr/residues/GME.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,605   copying moleculekit/share/pdb2pqr/residues/GNC.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,606   copying moleculekit/share/pdb2pqr/residues/GNC.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,607   copying moleculekit/share/pdb2pqr/residues/HHK.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,607   copying moleculekit/share/pdb2pqr/residues/HHK.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,608   copying moleculekit/share/pdb2pqr/residues/HLU.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,608   copying moleculekit/share/pdb2pqr/residues/HLU.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,608   copying moleculekit/share/pdb2pqr/residues/HLX.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,609   copying moleculekit/share/pdb2pqr/residues/HLX.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,610   copying moleculekit/share/pdb2pqr/residues/HOX.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,610   copying moleculekit/share/pdb2pqr/residues/HOX.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,611   copying moleculekit/share/pdb2pqr/residues/HPE.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,611   copying moleculekit/share/pdb2pqr/residues/HPE.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,612   copying moleculekit/share/pdb2pqr/residues/HQA.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,612   copying moleculekit/share/pdb2pqr/residues/HQA.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,613   copying moleculekit/share/pdb2pqr/residues/HTR.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,613   copying moleculekit/share/pdb2pqr/residues/HTR.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,614   copying moleculekit/share/pdb2pqr/residues/HYP.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,614   copying moleculekit/share/pdb2pqr/residues/HYP.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,616   copying moleculekit/share/pdb2pqr/residues/I2M.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,618   copying moleculekit/share/pdb2pqr/residues/I2M.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,620   copying moleculekit/share/pdb2pqr/residues/IGL.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,622   copying moleculekit/share/pdb2pqr/residues/IGL.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,624   copying moleculekit/share/pdb2pqr/residues/IIL.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,626   copying moleculekit/share/pdb2pqr/residues/IIL.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,628   copying moleculekit/share/pdb2pqr/residues/IML.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,630   copying moleculekit/share/pdb2pqr/residues/IML.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,632   copying moleculekit/share/pdb2pqr/residues/KYN.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,634   copying moleculekit/share/pdb2pqr/residues/KYN.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,636   copying moleculekit/share/pdb2pqr/residues/LME.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,638   copying moleculekit/share/pdb2pqr/residues/LME.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,640   copying moleculekit/share/pdb2pqr/residues/LMQ.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,642   copying moleculekit/share/pdb2pqr/residues/LMQ.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,644   copying moleculekit/share/pdb2pqr/residues/LYZ.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,646   copying moleculekit/share/pdb2pqr/residues/LYZ.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,648   copying moleculekit/share/pdb2pqr/residues/M3L.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,649   copying moleculekit/share/pdb2pqr/residues/M3L.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,652   copying moleculekit/share/pdb2pqr/residues/ME0.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,654   copying moleculekit/share/pdb2pqr/residues/ME0.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,656   copying moleculekit/share/pdb2pqr/residues/MEA.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,657   copying moleculekit/share/pdb2pqr/residues/MEA.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,659   copying moleculekit/share/pdb2pqr/residues/MEN.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,661   copying moleculekit/share/pdb2pqr/residues/MEN.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,663   copying moleculekit/share/pdb2pqr/residues/MEQ.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,665   copying moleculekit/share/pdb2pqr/residues/MEQ.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,667   copying moleculekit/share/pdb2pqr/residues/MLE.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,669   copying moleculekit/share/pdb2pqr/residues/MLE.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,670   copying moleculekit/share/pdb2pqr/residues/MLY.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,672   copying moleculekit/share/pdb2pqr/residues/MLY.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,674   copying moleculekit/share/pdb2pqr/residues/MLZ.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,676   copying moleculekit/share/pdb2pqr/residues/MLZ.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,678   copying moleculekit/share/pdb2pqr/residues/MME.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,680   copying moleculekit/share/pdb2pqr/residues/MME.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,682   copying moleculekit/share/pdb2pqr/residues/MMO.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,684   copying moleculekit/share/pdb2pqr/residues/MMO.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,686   copying moleculekit/share/pdb2pqr/residues/MVA.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,688   copying moleculekit/share/pdb2pqr/residues/MVA.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,690   copying moleculekit/share/pdb2pqr/residues/NAL.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,692   copying moleculekit/share/pdb2pqr/residues/NAL.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,694   copying moleculekit/share/pdb2pqr/residues/NCY.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,696   copying moleculekit/share/pdb2pqr/residues/NCY.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,698   copying moleculekit/share/pdb2pqr/residues/NLE.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,700   copying moleculekit/share/pdb2pqr/residues/NLE.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,702   copying moleculekit/share/pdb2pqr/residues/NVA.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,704   copying moleculekit/share/pdb2pqr/residues/NVA.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,705   copying moleculekit/share/pdb2pqr/residues/NZC.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,707   copying moleculekit/share/pdb2pqr/residues/NZC.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,709   copying moleculekit/share/pdb2pqr/residues/OCY.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,711   copying moleculekit/share/pdb2pqr/residues/OCY.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,713   copying moleculekit/share/pdb2pqr/residues/OMX.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,714   copying moleculekit/share/pdb2pqr/residues/OMX.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,716   copying moleculekit/share/pdb2pqr/residues/ONL.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,718   copying moleculekit/share/pdb2pqr/residues/ONL.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,720   copying moleculekit/share/pdb2pqr/residues/ORM.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,722   copying moleculekit/share/pdb2pqr/residues/ORM.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,724   copying moleculekit/share/pdb2pqr/residues/P1L.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,726   copying moleculekit/share/pdb2pqr/residues/P1L.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,728   copying moleculekit/share/pdb2pqr/residues/PCA.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,730   copying moleculekit/share/pdb2pqr/residues/PCA.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,732   copying moleculekit/share/pdb2pqr/residues/PRK.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,734   copying moleculekit/share/pdb2pqr/residues/PRK.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,737   copying moleculekit/share/pdb2pqr/residues/PTR.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,738   copying moleculekit/share/pdb2pqr/residues/PTR.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,741   copying moleculekit/share/pdb2pqr/residues/SEP.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,743   copying moleculekit/share/pdb2pqr/residues/SEP.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,745   copying moleculekit/share/pdb2pqr/residues/TPO.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,746   copying moleculekit/share/pdb2pqr/residues/TPO.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,749   copying moleculekit/share/pdb2pqr/residues/TRO.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,751   copying moleculekit/share/pdb2pqr/residues/TRO.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,752   copying moleculekit/share/pdb2pqr/residues/TY2.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,754   copying moleculekit/share/pdb2pqr/residues/TY2.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,756   copying moleculekit/share/pdb2pqr/residues/TYQ.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,758   copying moleculekit/share/pdb2pqr/residues/TYQ.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,760   copying moleculekit/share/pdb2pqr/residues/YCM.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,761   copying moleculekit/share/pdb2pqr/residues/YCM.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,763   copying moleculekit/share/pdb2pqr/residues/YNM.dat -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,765   copying moleculekit/share/pdb2pqr/residues/YNM.xml -> build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues
2024-04-19T11:39:40,767   creating build/lib.linux-armv7l-cpython-311/moleculekit/tmalign
2024-04-19T11:39:40,768   copying moleculekit/tmalign/tmalign_util.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/tmalign
2024-04-19T11:39:40,788   copying moleculekit/tmalign/tmalign_util.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/tmalign
2024-04-19T11:39:40,790   copying moleculekit/tmalign/tmalignlib.pxd -> build/lib.linux-armv7l-cpython-311/moleculekit/tmalign
2024-04-19T11:39:40,792   creating build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/include
2024-04-19T11:39:40,792   copying moleculekit/tmalign/include/TMAlign.h -> build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/include
2024-04-19T11:39:40,794   creating build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/src
2024-04-19T11:39:40,796   copying moleculekit/tmalign/src/TMAlign.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/src
2024-04-19T11:39:40,802   creating build/lib.linux-armv7l-cpython-311/moleculekit/wrapping
2024-04-19T11:39:40,804   copying moleculekit/wrapping/wrapping.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/wrapping
2024-04-19T11:39:40,825   copying moleculekit/wrapping/wrapping.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/wrapping
2024-04-19T11:39:40,828   creating build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/binpos
2024-04-19T11:39:40,829   copying moleculekit/fileformats/binpos/binpos.c -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/binpos
2024-04-19T11:39:40,849   copying moleculekit/fileformats/binpos/binpos.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/binpos
2024-04-19T11:39:40,851   copying moleculekit/fileformats/binpos/binposlib.pxd -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/binpos
2024-04-19T11:39:40,853   creating build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/binpos/include
2024-04-19T11:39:40,854   copying moleculekit/fileformats/binpos/include/binposplugin.h -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/binpos/include
2024-04-19T11:39:40,856   copying moleculekit/fileformats/binpos/include/largefiles.h -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/binpos/include
2024-04-19T11:39:40,858   copying moleculekit/fileformats/binpos/include/molfile_plugin.h -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/binpos/include
2024-04-19T11:39:40,861   creating build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/binpos/src
2024-04-19T11:39:40,862   copying moleculekit/fileformats/binpos/src/binposplugin.c -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/binpos/src
2024-04-19T11:39:40,864   creating build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/dcd
2024-04-19T11:39:40,865   copying moleculekit/fileformats/dcd/dcd.c -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/dcd
2024-04-19T11:39:40,879   copying moleculekit/fileformats/dcd/dcd.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/dcd
2024-04-19T11:39:40,882   copying moleculekit/fileformats/dcd/dcdlib.pxd -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/dcd
2024-04-19T11:39:40,883   creating build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/dcd/include
2024-04-19T11:39:40,884   copying moleculekit/fileformats/dcd/include/dcdplugin.h -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/dcd/include
2024-04-19T11:39:40,886   copying moleculekit/fileformats/dcd/include/endianswap.h -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/dcd/include
2024-04-19T11:39:40,889   copying moleculekit/fileformats/dcd/include/fastio.h -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/dcd/include
2024-04-19T11:39:40,891   copying moleculekit/fileformats/dcd/include/largefiles.h -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/dcd/include
2024-04-19T11:39:40,893   copying moleculekit/fileformats/dcd/include/molfile_plugin.h -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/dcd/include
2024-04-19T11:39:40,896   creating build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/dcd/src
2024-04-19T11:39:40,897   copying moleculekit/fileformats/dcd/src/dcdplugin.c -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/dcd/src
2024-04-19T11:39:40,900   creating build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc
2024-04-19T11:39:40,901   copying moleculekit/fileformats/xtc/trr.c -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc
2024-04-19T11:39:40,922   copying moleculekit/fileformats/xtc/trr.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc
2024-04-19T11:39:40,924   copying moleculekit/fileformats/xtc/trrlib.pxd -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc
2024-04-19T11:39:40,926   copying moleculekit/fileformats/xtc/xdrlib.pxd -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc
2024-04-19T11:39:40,928   copying moleculekit/fileformats/xtc/xtc.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc
2024-04-19T11:39:40,950   copying moleculekit/fileformats/xtc/xtc.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc
2024-04-19T11:39:40,952   copying moleculekit/fileformats/xtc/xtclib.pxd -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc
2024-04-19T11:39:40,954   creating build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/include
2024-04-19T11:39:40,955   copying moleculekit/fileformats/xtc/include/trr_header.h -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/include
2024-04-19T11:39:40,957   copying moleculekit/fileformats/xtc/include/xdr_seek.h -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/include
2024-04-19T11:39:40,959   copying moleculekit/fileformats/xtc/include/xdrfile.h -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/include
2024-04-19T11:39:40,962   copying moleculekit/fileformats/xtc/include/xdrfile_trr.h -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/include
2024-04-19T11:39:40,964   copying moleculekit/fileformats/xtc/include/xdrfile_xtc.h -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/include
2024-04-19T11:39:40,966   copying moleculekit/fileformats/xtc/include/xtc.h -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/include
2024-04-19T11:39:40,968   creating build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/src
2024-04-19T11:39:40,969   copying moleculekit/fileformats/xtc/src/xdr_seek.c -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/src
2024-04-19T11:39:40,971   copying moleculekit/fileformats/xtc/src/xdrfile.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/src
2024-04-19T11:39:40,974   copying moleculekit/fileformats/xtc/src/xdrfile_trr.c -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/src
2024-04-19T11:39:40,977   copying moleculekit/fileformats/xtc/src/xdrfile_xtc.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/src
2024-04-19T11:39:40,979   copying moleculekit/fileformats/xtc/src/xtc.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/src
2024-04-19T11:39:40,982   creating build/lib.linux-armv7l-cpython-311/moleculekit/interactions/cationpi
2024-04-19T11:39:40,983   copying moleculekit/interactions/cationpi/cationpi.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions/cationpi
2024-04-19T11:39:41,002   copying moleculekit/interactions/cationpi/cationpi.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions/cationpi
2024-04-19T11:39:41,005   creating build/lib.linux-armv7l-cpython-311/moleculekit/interactions/hbonds
2024-04-19T11:39:41,005   copying moleculekit/interactions/hbonds/hbonds.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions/hbonds
2024-04-19T11:39:41,025   copying moleculekit/interactions/hbonds/hbonds.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions/hbonds
2024-04-19T11:39:41,028   creating build/lib.linux-armv7l-cpython-311/moleculekit/interactions/pipi
2024-04-19T11:39:41,029   copying moleculekit/interactions/pipi/pipi.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions/pipi
2024-04-19T11:39:41,048   copying moleculekit/interactions/pipi/pipi.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions/pipi
2024-04-19T11:39:41,050   creating build/lib.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole
2024-04-19T11:39:41,051   copying moleculekit/interactions/sigmahole/sigmahole.cpp -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole
2024-04-19T11:39:41,073   copying moleculekit/interactions/sigmahole/sigmahole.pyx -> build/lib.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole
2024-04-19T11:39:41,084   UPDATING build/lib.linux-armv7l-cpython-311/moleculekit/_version.py
2024-04-19T11:39:41,085   set build/lib.linux-armv7l-cpython-311/moleculekit/_version.py to '1.8.31'
2024-04-19T11:39:41,085   running build_ext
2024-04-19T11:39:41,097   building 'moleculekit.interactions.hbonds' extension
2024-04-19T11:39:41,097   creating build/temp.linux-armv7l-cpython-311
2024-04-19T11:39:41,098   creating build/temp.linux-armv7l-cpython-311/moleculekit
2024-04-19T11:39:41,099   creating build/temp.linux-armv7l-cpython-311/moleculekit/interactions
2024-04-19T11:39:41,099   creating build/temp.linux-armv7l-cpython-311/moleculekit/interactions/hbonds
2024-04-19T11:39:41,101   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/interactions/hbonds/hbonds.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/interactions/hbonds/hbonds.o -O3
2024-04-19T11:39:41,419   In file included from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2024-04-19T11:39:41,420                    from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2024-04-19T11:39:41,420                    from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2024-04-19T11:39:41,421                    from moleculekit/interactions/hbonds/hbonds.cpp:1265:
2024-04-19T11:39:41,422   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-04-19T11:39:41,422      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-04-19T11:39:41,423         |  ^~~~~~~
2024-04-19T11:40:08,859   In function ‘PyObject* __pyx_pf_11moleculekit_12interactions_6hbonds_calculate(PyObject*, PyArrayObject*, PyArrayObject*, PyArrayObject*, PyArrayObject*, PyArrayObject*, PyArrayObject*, float, float, bool, bool)’,
2024-04-19T11:40:08,860       inlined from ‘PyObject* __pyx_pw_11moleculekit_12interactions_6hbonds_1calculate(PyObject*, PyObject* const*, Py_ssize_t, PyObject*)’ at moleculekit/interactions/hbonds/hbonds.cpp:19989:68:
2024-04-19T11:40:08,861   moleculekit/interactions/hbonds/hbonds.cpp:21019:52: warning: ‘__pyx_v_d_idx_h’ may be used uninitialized [-Wmaybe-uninitialized]
2024-04-19T11:40:08,861   21019 |             (__pyx_v_results[__pyx_v_f]).push_back(__pyx_v_d_idx_h);
2024-04-19T11:40:08,862         |                                                    ^~~~~~~~~~~~~~~
2024-04-19T11:40:08,862   moleculekit/interactions/hbonds/hbonds.cpp: In function ‘PyObject* __pyx_pw_11moleculekit_12interactions_6hbonds_1calculate(PyObject*, PyObject* const*, Py_ssize_t, PyObject*)’:
2024-04-19T11:40:08,863   moleculekit/interactions/hbonds/hbonds.cpp:20032:57: note: ‘__pyx_v_d_idx_h’ was declared here
2024-04-19T11:40:08,864   20032 |   __pyx_t_11moleculekit_12interactions_6hbonds_UINT32_t __pyx_v_d_idx_h;
2024-04-19T11:40:08,865         |                                                         ^~~~~~~~~~~~~~~
2024-04-19T11:40:11,913   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/interactions/hbonds/hbonds.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/interactions/hbonds.cpython-311-arm-linux-gnueabihf.so
2024-04-19T11:40:12,200   building 'moleculekit.interactions.pipi' extension
2024-04-19T11:40:12,201   creating build/temp.linux-armv7l-cpython-311/moleculekit/interactions/pipi
2024-04-19T11:40:12,201   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/interactions/pipi/pipi.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/interactions/pipi/pipi.o -O3
2024-04-19T11:40:12,506   In file included from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2024-04-19T11:40:12,507                    from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2024-04-19T11:40:12,508                    from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2024-04-19T11:40:12,508                    from moleculekit/interactions/pipi/pipi.cpp:1265:
2024-04-19T11:40:12,509   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-04-19T11:40:12,509      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-04-19T11:40:12,510         |  ^~~~~~~
2024-04-19T11:40:45,463   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/interactions/pipi/pipi.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/interactions/pipi.cpython-311-arm-linux-gnueabihf.so
2024-04-19T11:40:45,744   building 'moleculekit.interactions.cationpi' extension
2024-04-19T11:40:45,744   creating build/temp.linux-armv7l-cpython-311/moleculekit/interactions/cationpi
2024-04-19T11:40:45,745   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/interactions/cationpi/cationpi.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/interactions/cationpi/cationpi.o -O3
2024-04-19T11:40:46,058   In file included from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2024-04-19T11:40:46,059                    from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2024-04-19T11:40:46,059                    from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2024-04-19T11:40:46,060                    from moleculekit/interactions/cationpi/cationpi.cpp:1265:
2024-04-19T11:40:46,060   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-04-19T11:40:46,061      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-04-19T11:40:46,061         |  ^~~~~~~
2024-04-19T11:41:18,416   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/interactions/cationpi/cationpi.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/interactions/cationpi.cpython-311-arm-linux-gnueabihf.so
2024-04-19T11:41:18,700   building 'moleculekit.interactions.sigmahole' extension
2024-04-19T11:41:18,701   creating build/temp.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole
2024-04-19T11:41:18,702   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/interactions/sigmahole/sigmahole.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole/sigmahole.o -O3
2024-04-19T11:41:19,012   In file included from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2024-04-19T11:41:19,013                    from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2024-04-19T11:41:19,013                    from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2024-04-19T11:41:19,014                    from moleculekit/interactions/sigmahole/sigmahole.cpp:1265:
2024-04-19T11:41:19,015   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-04-19T11:41:19,015      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-04-19T11:41:19,016         |  ^~~~~~~
2024-04-19T11:41:50,917   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole/sigmahole.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole.cpython-311-arm-linux-gnueabihf.so
2024-04-19T11:41:51,198   building 'moleculekit.wrapping' extension
2024-04-19T11:41:51,199   creating build/temp.linux-armv7l-cpython-311/moleculekit/wrapping
2024-04-19T11:41:51,200   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/wrapping/wrapping.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/wrapping/wrapping.o -O3
2024-04-19T11:41:51,537   In file included from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2024-04-19T11:41:51,538                    from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2024-04-19T11:41:51,538                    from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2024-04-19T11:41:51,538                    from moleculekit/wrapping/wrapping.cpp:1265:
2024-04-19T11:41:51,539   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-04-19T11:41:51,539      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-04-19T11:41:51,540         |  ^~~~~~~
2024-04-19T11:42:21,765   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/wrapping/wrapping.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/wrapping.cpython-311-arm-linux-gnueabihf.so
2024-04-19T11:42:21,964   building 'moleculekit.bondguesser_utils' extension
2024-04-19T11:42:21,965   creating build/temp.linux-armv7l-cpython-311/moleculekit/bondguesser_utils
2024-04-19T11:42:21,965   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/bondguesser_utils/bondguesser_utils.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/bondguesser_utils/bondguesser_utils.o -O3
2024-04-19T11:42:22,269   In file included from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2024-04-19T11:42:22,270                    from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2024-04-19T11:42:22,271                    from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2024-04-19T11:42:22,272                    from moleculekit/bondguesser_utils/bondguesser_utils.cpp:1265:
2024-04-19T11:42:22,272   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-04-19T11:42:22,273      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-04-19T11:42:22,273         |  ^~~~~~~
2024-04-19T11:42:24,572   moleculekit/bondguesser_utils/bondguesser_utils.cpp: In function ‘PyObject* __pyx_pf_11moleculekit_17bondguesser_utils_make_grid_neighborlist_nonperiodic(PyObject*, __Pyx_memviewslice, __pyx_t_11moleculekit_17bondguesser_utils_UINT32_t, __pyx_t_11moleculekit_17bondguesser_utils_UINT32_t, __pyx_t_11moleculekit_17bondguesser_utils_UINT32_t)’:
2024-04-19T11:42:24,573   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19801:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} [-Wsign-compare]
2024-04-19T11:42:24,573   19801 |   for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) {
2024-04-19T11:42:24,574         |                       ~~~~~~~~~~^~~~~~~~~~~
2024-04-19T11:42:24,575   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19813:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} [-Wsign-compare]
2024-04-19T11:42:24,575   19813 |     for (__pyx_t_6 = 0; __pyx_t_6 < __pyx_t_5; __pyx_t_6+=1) {
2024-04-19T11:42:24,576         |                         ~~~~~~~~~~^~~~~~~~~~~
2024-04-19T11:42:24,576   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19825:37: warning: comparison of integer expressions of different signedness: ‘int’ and ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} [-Wsign-compare]
2024-04-19T11:42:24,577   19825 |       for (__pyx_t_9 = 0; __pyx_t_9 < __pyx_t_8; __pyx_t_9+=1) {
2024-04-19T11:42:24,577         |                           ~~~~~~~~~~^~~~~~~~~~~
2024-04-19T11:42:24,578   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19864:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-04-19T11:42:24,578   19864 |         __pyx_t_12 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2024-04-19T11:42:24,579         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:42:24,579   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19903:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-04-19T11:42:24,580   19903 |         __pyx_t_12 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2024-04-19T11:42:24,580         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:42:24,581   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19942:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-04-19T11:42:24,582   19942 |         __pyx_t_12 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2024-04-19T11:42:24,582         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:42:24,583   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19981:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-04-19T11:42:24,584   19981 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2024-04-19T11:42:24,584         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:42:24,585   moleculekit/bondguesser_utils/bondguesser_utils.cpp:19987:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-04-19T11:42:24,586   19987 |         __pyx_t_13 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2024-04-19T11:42:24,587         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:42:24,587   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20028:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-04-19T11:42:24,588   20028 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2024-04-19T11:42:24,588         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:42:24,589   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20034:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-04-19T11:42:24,590   20034 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2024-04-19T11:42:24,590         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:42:24,591   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20075:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-04-19T11:42:24,592   20075 |         __pyx_t_13 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2024-04-19T11:42:24,592         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:42:24,594   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20081:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-04-19T11:42:24,594   20081 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2024-04-19T11:42:24,594         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:42:24,595   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20122:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-04-19T11:42:24,595   20122 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2024-04-19T11:42:24,596         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:42:24,596   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20175:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-04-19T11:42:24,597   20175 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2024-04-19T11:42:24,598         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:42:24,598   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20222:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-04-19T11:42:24,599   20222 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2024-04-19T11:42:24,599         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:42:24,600   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20263:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-04-19T11:42:24,600   20263 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2024-04-19T11:42:24,601         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:42:24,602   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20269:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-04-19T11:42:24,602   20269 |         __pyx_t_13 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2024-04-19T11:42:24,603         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:42:24,604   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20275:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-04-19T11:42:24,604   20275 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2024-04-19T11:42:24,605         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:42:24,606   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20322:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-04-19T11:42:24,606   20322 |         __pyx_t_13 = (__pyx_v_yi < (__pyx_v_yboxes - 1));
2024-04-19T11:42:24,607         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:42:24,608   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20328:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-04-19T11:42:24,608   20328 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2024-04-19T11:42:24,609         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:42:24,610   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20369:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-04-19T11:42:24,610   20369 |         __pyx_t_13 = (__pyx_v_xi < (__pyx_v_xboxes - 1));
2024-04-19T11:42:24,611         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:42:24,612   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20381:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-04-19T11:42:24,612   20381 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2024-04-19T11:42:24,613         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:42:24,614   moleculekit/bondguesser_utils/bondguesser_utils.cpp:20434:34: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare]
2024-04-19T11:42:24,614   20434 |         __pyx_t_13 = (__pyx_v_zi < (__pyx_v_zboxes - 1));
2024-04-19T11:42:24,615         |                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:42:24,617   moleculekit/bondguesser_utils/bondguesser_utils.cpp: In function ‘PyObject* __pyx_pf_11moleculekit_17bondguesser_utils_2grid_bonds(PyObject*, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, float, int, __Pyx_memviewslice, __Pyx_memviewslice)’:
2024-04-19T11:42:24,618   moleculekit/bondguesser_utils/bondguesser_utils.cpp:21056:37: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2024-04-19T11:42:24,618   21056 |       __pyx_t_6 = (__pyx_v_boxneigh == __pyx_v_n_boxes);
2024-04-19T11:42:24,619         |                    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
2024-04-19T11:42:24,619   moleculekit/bondguesser_utils/bondguesser_utils.cpp:21093:37: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_17bondguesser_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2024-04-19T11:42:24,620   21093 |       __pyx_t_6 = (__pyx_v_boxneigh == __pyx_v_boxidx);
2024-04-19T11:42:24,621         |                    ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
2024-04-19T11:42:51,084   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/bondguesser_utils/bondguesser_utils.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/bondguesser_utils.cpython-311-arm-linux-gnueabihf.so
2024-04-19T11:42:51,351   building 'moleculekit.atomselect_utils' extension
2024-04-19T11:42:51,352   creating build/temp.linux-armv7l-cpython-311/moleculekit/atomselect_utils
2024-04-19T11:42:51,353   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/atomselect_utils/atomselect_utils.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/atomselect_utils/atomselect_utils.o -O3
2024-04-19T11:42:51,659   In file included from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2024-04-19T11:42:51,660                    from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2024-04-19T11:42:51,660                    from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2024-04-19T11:42:51,661                    from moleculekit/atomselect_utils/atomselect_utils.cpp:1282:
2024-04-19T11:42:51,661   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-04-19T11:42:51,662      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-04-19T11:42:51,663         |  ^~~~~~~
2024-04-19T11:42:54,173   moleculekit/atomselect_utils/atomselect_utils.cpp: In function ‘bool __pyx_f_11moleculekit_16atomselect_utils__find_connected_subfragment(int, int, const char*, const char*, const char*, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, std::vector<std::__cxx11::basic_string<char> >&, __Pyx_memviewslice, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&)’:
2024-04-19T11:42:54,174   moleculekit/atomselect_utils/atomselect_utils.cpp:23255:161: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_16atomselect_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2024-04-19T11:42:54,175   23255 |       __pyx_t_3 = ((*((__pyx_t_11moleculekit_16atomselect_utils_UINT32_t *) ( /* dim=0 */ (__pyx_v_uq_resid.data + __pyx_t_2 * __pyx_v_uq_resid.strides[0]) ))) != __pyx_v_resnum);
2024-04-19T11:42:54,175         |                    ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
2024-04-19T11:42:54,183   moleculekit/atomselect_utils/atomselect_utils.cpp: In function ‘bool __pyx_f_11moleculekit_16atomselect_utils__find_subfragments(int, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, std::vector<std::__cxx11::basic_string<char> >&, __Pyx_memviewslice, std::vector<std::vector<int> >&)’:
2024-04-19T11:42:54,183   moleculekit/atomselect_utils/atomselect_utils.cpp:23507:163: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_16atomselect_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2024-04-19T11:42:54,184   23507 |         __pyx_t_6 = ((*((__pyx_t_11moleculekit_16atomselect_utils_UINT32_t *) ( /* dim=0 */ (__pyx_v_uq_resid.data + __pyx_t_5 * __pyx_v_uq_resid.strides[0]) ))) != __pyx_v_i);
2024-04-19T11:42:54,184         |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2024-04-19T11:42:54,192   moleculekit/atomselect_utils/atomselect_utils.cpp: In function ‘bool __pyx_f_11moleculekit_16atomselect_utils__find_subfragments_topologically(int, std::vector<std::vector<int> >&, std::vector<std::vector<int> >&, __Pyx_memviewslice, __Pyx_memviewslice, __Pyx_memviewslice, std::vector<std::__cxx11::basic_string<char> >&, __Pyx_memviewslice, std::vector<std::vector<int> >&)’:
2024-04-19T11:42:54,192   moleculekit/atomselect_utils/atomselect_utils.cpp:23774:163: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_16atomselect_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2024-04-19T11:42:54,193   23774 |         __pyx_t_6 = ((*((__pyx_t_11moleculekit_16atomselect_utils_UINT32_t *) ( /* dim=0 */ (__pyx_v_uq_resid.data + __pyx_t_5 * __pyx_v_uq_resid.strides[0]) ))) != __pyx_v_i);
2024-04-19T11:42:54,194         |                      ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2024-04-19T11:43:28,444   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/atomselect_utils/atomselect_utils.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/atomselect_utils.cpython-311-arm-linux-gnueabihf.so
2024-04-19T11:43:28,736   building 'moleculekit.distance_utils' extension
2024-04-19T11:43:28,736   creating build/temp.linux-armv7l-cpython-311/moleculekit/distance_utils
2024-04-19T11:43:28,737   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/distance_utils/distance_utils.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/distance_utils/distance_utils.o -O3
2024-04-19T11:43:29,040   In file included from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2024-04-19T11:43:29,040                    from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2024-04-19T11:43:29,041                    from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2024-04-19T11:43:29,041                    from moleculekit/distance_utils/distance_utils.cpp:1265:
2024-04-19T11:43:29,042   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-04-19T11:43:29,042      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-04-19T11:43:29,043         |  ^~~~~~~
2024-04-19T11:43:31,441   moleculekit/distance_utils/distance_utils.cpp: In function ‘PyObject* __pyx_pf_11moleculekit_14distance_utils_2get_collisions(PyObject*, __Pyx_memviewslice, __Pyx_memviewslice, float)’:
2024-04-19T11:43:31,442   moleculekit/distance_utils/distance_utils.cpp:21359:33: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_14distance_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2024-04-19T11:43:31,443   21359 |   for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) {
2024-04-19T11:43:31,443         |                       ~~~~~~~~~~^~~~~~~~~~~
2024-04-19T11:43:31,444   moleculekit/distance_utils/distance_utils.cpp:21371:35: warning: comparison of integer expressions of different signedness: ‘__pyx_t_11moleculekit_14distance_utils_UINT32_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
2024-04-19T11:43:31,444   21371 |     for (__pyx_t_6 = 0; __pyx_t_6 < __pyx_t_5; __pyx_t_6+=1) {
2024-04-19T11:43:31,445         |                         ~~~~~~~~~~^~~~~~~~~~~
2024-04-19T11:44:08,648   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/distance_utils/distance_utils.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/distance_utils.cpython-311-arm-linux-gnueabihf.so
2024-04-19T11:44:08,943   building 'moleculekit.occupancy_utils' extension
2024-04-19T11:44:08,944   creating build/temp.linux-armv7l-cpython-311/moleculekit/occupancy_utils
2024-04-19T11:44:08,944   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/occupancy_utils/occupancy_utils.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/occupancy_utils/occupancy_utils.o -O3
2024-04-19T11:44:09,253   In file included from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2024-04-19T11:44:09,254                    from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2024-04-19T11:44:09,254                    from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2024-04-19T11:44:09,255                    from moleculekit/occupancy_utils/occupancy_utils.cpp:1265:
2024-04-19T11:44:09,255   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-04-19T11:44:09,256      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-04-19T11:44:09,257         |  ^~~~~~~
2024-04-19T11:44:36,439   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/occupancy_utils/occupancy_utils.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/occupancy_utils.cpython-311-arm-linux-gnueabihf.so
2024-04-19T11:44:36,630   building 'moleculekit.cython_utils' extension
2024-04-19T11:44:36,630   creating build/temp.linux-armv7l-cpython-311/moleculekit/cython_utils
2024-04-19T11:44:36,631   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/cython_utils/cython_utils.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/cython_utils/cython_utils.o -O3
2024-04-19T11:44:36,932   In file included from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2024-04-19T11:44:36,932                    from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2024-04-19T11:44:36,933                    from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2024-04-19T11:44:36,933                    from moleculekit/cython_utils/cython_utils.cpp:1265:
2024-04-19T11:44:36,934   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-04-19T11:44:36,934      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-04-19T11:44:36,935         |  ^~~~~~~
2024-04-19T11:45:06,838   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/cython_utils/cython_utils.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/cython_utils.cpython-311-arm-linux-gnueabihf.so
2024-04-19T11:45:07,117   building 'moleculekit.xtc' extension
2024-04-19T11:45:07,117   creating build/temp.linux-armv7l-cpython-311/moleculekit/fileformats
2024-04-19T11:45:07,118   creating build/temp.linux-armv7l-cpython-311/moleculekit/fileformats/xtc
2024-04-19T11:45:07,119   creating build/temp.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/src
2024-04-19T11:45:07,120   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/fileformats/xtc -Imoleculekit/fileformats/xtc/include/ -Imoleculekit/fileformats/xtc/ -I/tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/fileformats/xtc/src/xdrfile.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/src/xdrfile.o
2024-04-19T11:45:07,801   moleculekit/fileformats/xtc/src/xdrfile.cpp:66:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-04-19T11:45:07,801      66 |         "OK",
2024-04-19T11:45:07,802         |         ^~~~
2024-04-19T11:45:07,802   moleculekit/fileformats/xtc/src/xdrfile.cpp:67:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-04-19T11:45:07,803      67 |         "Header",
2024-04-19T11:45:07,804         |         ^~~~~~~~
2024-04-19T11:45:07,804   moleculekit/fileformats/xtc/src/xdrfile.cpp:68:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-04-19T11:45:07,805      68 |         "String",
2024-04-19T11:45:07,806         |         ^~~~~~~~
2024-04-19T11:45:07,806   moleculekit/fileformats/xtc/src/xdrfile.cpp:69:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-04-19T11:45:07,807      69 |         "Double",
2024-04-19T11:45:07,808         |         ^~~~~~~~
2024-04-19T11:45:07,808   moleculekit/fileformats/xtc/src/xdrfile.cpp:70:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-04-19T11:45:07,809      70 |         "Integer",
2024-04-19T11:45:07,810         |         ^~~~~~~~~
2024-04-19T11:45:07,811   moleculekit/fileformats/xtc/src/xdrfile.cpp:71:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-04-19T11:45:07,811      71 |         "Float",
2024-04-19T11:45:07,812         |         ^~~~~~~
2024-04-19T11:45:07,812   moleculekit/fileformats/xtc/src/xdrfile.cpp:72:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-04-19T11:45:07,812      72 |         "Unsigned integer",
2024-04-19T11:45:07,813         |         ^~~~~~~~~~~~~~~~~~
2024-04-19T11:45:07,813   moleculekit/fileformats/xtc/src/xdrfile.cpp:73:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-04-19T11:45:07,814      73 |         "Compressed 3D coordinate",
2024-04-19T11:45:07,814         |         ^~~~~~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:45:07,815   moleculekit/fileformats/xtc/src/xdrfile.cpp:74:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-04-19T11:45:07,816      74 |         "Closing file",
2024-04-19T11:45:07,816         |         ^~~~~~~~~~~~~~
2024-04-19T11:45:07,817   moleculekit/fileformats/xtc/src/xdrfile.cpp:75:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-04-19T11:45:07,817      75 |         "Magic number",
2024-04-19T11:45:07,818         |         ^~~~~~~~~~~~~~
2024-04-19T11:45:07,818   moleculekit/fileformats/xtc/src/xdrfile.cpp:76:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-04-19T11:45:07,819      76 |         "Not enough memory",
2024-04-19T11:45:07,819         |         ^~~~~~~~~~~~~~~~~~~
2024-04-19T11:45:07,820   moleculekit/fileformats/xtc/src/xdrfile.cpp:77:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-04-19T11:45:07,821      77 |         "End of file",
2024-04-19T11:45:07,821         |         ^~~~~~~~~~~~~
2024-04-19T11:45:07,822   moleculekit/fileformats/xtc/src/xdrfile.cpp:78:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-04-19T11:45:07,823      78 |         "File not found"
2024-04-19T11:45:07,824         |         ^~~~~~~~~~~~~~~~
2024-04-19T11:45:07,829   moleculekit/fileformats/xtc/src/xdrfile.cpp: In function ‘int sizeofint(int)’:
2024-04-19T11:45:07,830   moleculekit/fileformats/xtc/src/xdrfile.cpp:459:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:07,831     459 |     while (size >= num && num_of_bits < 32)
2024-04-19T11:45:07,832         |            ~~~~~^~~~~~
2024-04-19T11:45:07,832   moleculekit/fileformats/xtc/src/xdrfile.cpp: In function ‘int sizeofints(int, unsigned int*)’:
2024-04-19T11:45:07,833   moleculekit/fileformats/xtc/src/xdrfile.cpp:505:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-04-19T11:45:07,834     505 |     while (bytes[num_of_bytes] >= num)
2024-04-19T11:45:07,834         |            ~~~~~~~~~~~~~~~~~~~~^~~~~~
2024-04-19T11:45:07,837   moleculekit/fileformats/xtc/src/xdrfile.cpp: In function ‘void encodeints(int*, int, int, unsigned int*, unsigned int*)’:
2024-04-19T11:45:07,838   moleculekit/fileformats/xtc/src/xdrfile.cpp:614:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:07,839     614 |     if (num_of_bits >= num_of_bytes * 8)
2024-04-19T11:45:07,839         |         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
2024-04-19T11:45:07,840   moleculekit/fileformats/xtc/src/xdrfile.cpp:616:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:07,841     616 |                 for (i = 0; i < num_of_bytes; i++)
2024-04-19T11:45:07,842         |                             ~~^~~~~~~~~~~~~~
2024-04-19T11:45:07,842   moleculekit/fileformats/xtc/src/xdrfile.cpp:624:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:07,843     624 |                 for (i = 0; i < num_of_bytes-1; i++)
2024-04-19T11:45:07,844         |                             ~~^~~~~~~~~~~~~~~~
2024-04-19T11:45:07,844   moleculekit/fileformats/xtc/src/xdrfile.cpp: In function ‘int decodebits(int*, int)’:
2024-04-19T11:45:07,845   moleculekit/fileformats/xtc/src/xdrfile.cpp:664:30: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-04-19T11:45:07,845     664 |                 if (lastbits < num_of_bits)
2024-04-19T11:45:07,845         |                     ~~~~~~~~~^~~~~~~~~~~~~
2024-04-19T11:45:07,850   moleculekit/fileformats/xtc/src/xdrfile.cpp: In function ‘int xdrfile_decompress_coord_float(float*, int*, float*, XDRFILE*)’:
2024-04-19T11:45:07,851   moleculekit/fileformats/xtc/src/xdrfile.cpp:785:17: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-04-19T11:45:07,851     785 |         if(size3>xfp->buf1size)
2024-04-19T11:45:07,852         |            ~~~~~^~~~~~~~~~~~~~
2024-04-19T11:45:07,854   moleculekit/fileformats/xtc/src/xdrfile.cpp:842:26: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-04-19T11:45:07,855     842 |         maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2024-04-19T11:45:07,855         |                          ^
2024-04-19T11:45:07,859   moleculekit/fileformats/xtc/src/xdrfile.cpp:932:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:07,860     932 |                                 if(countmjh >= size3 ) { return -1; }
2024-04-19T11:45:07,861         |                                    ~~~~~~~~~^~~~~~~~
2024-04-19T11:45:07,861   moleculekit/fileformats/xtc/src/xdrfile.cpp:935:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:07,862     935 |                                 if(countmjh >= size3 ) { return -1; }
2024-04-19T11:45:07,863         |                                    ~~~~~~~~~^~~~~~~~
2024-04-19T11:45:07,863   moleculekit/fileformats/xtc/src/xdrfile.cpp:938:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:07,864     938 |                                 if(countmjh >= size3 ) { return -1; }
2024-04-19T11:45:07,865         |                                    ~~~~~~~~~^~~~~~~~
2024-04-19T11:45:07,865   moleculekit/fileformats/xtc/src/xdrfile.cpp:945:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:07,866     945 |                                 if(countmjh >= size3 ) { return -1; }
2024-04-19T11:45:07,867         |                                    ~~~~~~~~~^~~~~~~~
2024-04-19T11:45:07,867   moleculekit/fileformats/xtc/src/xdrfile.cpp:948:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:07,868     948 |                                 if(countmjh >= size3 ) { return -1; }
2024-04-19T11:45:07,868         |                                    ~~~~~~~~~^~~~~~~~
2024-04-19T11:45:07,869   moleculekit/fileformats/xtc/src/xdrfile.cpp:951:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:07,870     951 |                                 if(countmjh >= size3 ) { return -1; }
2024-04-19T11:45:07,870         |                                    ~~~~~~~~~^~~~~~~~
2024-04-19T11:45:07,871   moleculekit/fileformats/xtc/src/xdrfile.cpp:756:24: warning: variable ‘minidx’ set but not used [-Wunused-but-set-variable]
2024-04-19T11:45:07,872     756 |         int smallidx,  minidx, maxidx;
2024-04-19T11:45:07,872         |                        ^~~~~~
2024-04-19T11:45:07,873   moleculekit/fileformats/xtc/src/xdrfile.cpp:759:32: warning: variable ‘larger’ set but not used [-Wunused-but-set-variable]
2024-04-19T11:45:07,873     759 |         int smallnum, smaller, larger, i, is_smaller, run;
2024-04-19T11:45:07,874         |                                ^~~~~~
2024-04-19T11:45:07,874   moleculekit/fileformats/xtc/src/xdrfile.cpp:763:13: warning: unused variable ‘errval’ [-Wunused-variable]
2024-04-19T11:45:07,875     763 |         int errval=1;
2024-04-19T11:45:07,875         |             ^~~~~~
2024-04-19T11:45:07,876   moleculekit/fileformats/xtc/src/xdrfile.cpp: In function ‘int xdrfile_compress_coord_float(float*, int, float, XDRFILE*)’:
2024-04-19T11:45:07,877   moleculekit/fileformats/xtc/src/xdrfile.cpp:1011:17: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-04-19T11:45:07,877    1011 |         if(size3>xfp->buf1size)
2024-04-19T11:45:07,878         |            ~~~~~^~~~~~~~~~~~~~
2024-04-19T11:45:07,880   moleculekit/fileformats/xtc/src/xdrfile.cpp:1068:41: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:07,880    1068 |                 countmjh++; if( countmjh> size3) { return -1; }
2024-04-19T11:45:07,881         |                                 ~~~~~~~~^~~~~~~
2024-04-19T11:45:07,882   moleculekit/fileformats/xtc/src/xdrfile.cpp:1084:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:07,883    1084 |           countmjh++; if( countmjh> size3) { return -1; }
2024-04-19T11:45:07,883         |                           ~~~~~~~~^~~~~~~
2024-04-19T11:45:07,884   moleculekit/fileformats/xtc/src/xdrfile.cpp:1098:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:07,885    1098 |           countmjh++; if( countmjh> size3) { return -1; }
2024-04-19T11:45:07,885         |                           ~~~~~~~~^~~~~~~
2024-04-19T11:45:07,887   moleculekit/fileformats/xtc/src/xdrfile.cpp:1137:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:07,888    1137 |         while (smallidx < LASTIDX && magicints[smallidx] < mindiff)
2024-04-19T11:45:07,889         |                         ^
2024-04-19T11:45:07,889   moleculekit/fileformats/xtc/src/xdrfile.cpp:1143:26: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-04-19T11:45:07,890    1143 |         maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2024-04-19T11:45:07,890         |                          ^
2024-04-19T11:45:07,895   moleculekit/fileformats/xtc/src/xdrfile.cpp:1275:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:07,896    1275 |         if(tmp==(unsigned int)buf2[0])
2024-04-19T11:45:07,897         |            ~~~^~~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:45:07,897   moleculekit/fileformats/xtc/src/xdrfile.cpp:1001:13: warning: variable ‘errval’ set but not used [-Wunused-but-set-variable]
2024-04-19T11:45:07,898    1001 |         int errval;
2024-04-19T11:45:07,898         |             ^~~~~~
2024-04-19T11:45:07,901   moleculekit/fileformats/xtc/src/xdrfile.cpp: In function ‘int xdrfile_decompress_coord_double(double*, int*, double*, XDRFILE*)’:
2024-04-19T11:45:07,901   moleculekit/fileformats/xtc/src/xdrfile.cpp:1316:17: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-04-19T11:45:07,902    1316 |         if(size3>xfp->buf1size)
2024-04-19T11:45:07,903         |            ~~~~~^~~~~~~~~~~~~~
2024-04-19T11:45:07,904   moleculekit/fileformats/xtc/src/xdrfile.cpp:1377:26: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-04-19T11:45:07,904    1377 |         maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2024-04-19T11:45:07,905         |                          ^
2024-04-19T11:45:07,908   moleculekit/fileformats/xtc/src/xdrfile.cpp:1289:32: warning: variable ‘minidx’ set but not used [-Wunused-but-set-variable]
2024-04-19T11:45:07,909    1289 |         int smallidx,  maxidx, minidx;
2024-04-19T11:45:07,909         |                                ^~~~~~
2024-04-19T11:45:07,910   moleculekit/fileformats/xtc/src/xdrfile.cpp:1292:32: warning: variable ‘larger’ set but not used [-Wunused-but-set-variable]
2024-04-19T11:45:07,910    1292 |         int smallnum, smaller, larger, i, is_smaller, run;
2024-04-19T11:45:07,911         |                                ^~~~~~
2024-04-19T11:45:07,911   moleculekit/fileformats/xtc/src/xdrfile.cpp:1297:13: warning: unused variable ‘errval’ [-Wunused-variable]
2024-04-19T11:45:07,912    1297 |         int errval=1;
2024-04-19T11:45:07,912         |             ^~~~~~
2024-04-19T11:45:07,913   moleculekit/fileformats/xtc/src/xdrfile.cpp: In function ‘int xdrfile_compress_coord_double(double*, int, double, XDRFILE*)’:
2024-04-19T11:45:07,913   moleculekit/fileformats/xtc/src/xdrfile.cpp:1513:17: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-04-19T11:45:07,914    1513 |         if(size3>xfp->buf1size) {
2024-04-19T11:45:07,915         |            ~~~~~^~~~~~~~~~~~~~
2024-04-19T11:45:07,918   moleculekit/fileformats/xtc/src/xdrfile.cpp:1628:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:07,918    1628 |         while (smallidx < LASTIDX && magicints[smallidx] < mindiff) {
2024-04-19T11:45:07,919         |                         ^
2024-04-19T11:45:07,920   moleculekit/fileformats/xtc/src/xdrfile.cpp:1633:26: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-04-19T11:45:07,920    1633 |         maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2024-04-19T11:45:07,921         |                          ^
2024-04-19T11:45:07,924   moleculekit/fileformats/xtc/src/xdrfile.cpp:1743:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:07,924    1743 |         if(tmp==(unsigned int)buf2[0])
2024-04-19T11:45:07,925         |            ~~~^~~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:45:07,926   moleculekit/fileformats/xtc/src/xdrfile.cpp:1504:13: warning: variable ‘errval’ set but not used [-Wunused-but-set-variable]
2024-04-19T11:45:07,926    1504 |         int errval=1;
2024-04-19T11:45:07,927         |             ^~~~~~
2024-04-19T11:45:10,759   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/fileformats/xtc -Imoleculekit/fileformats/xtc/include/ -Imoleculekit/fileformats/xtc/ -I/tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/fileformats/xtc/src/xdrfile_xtc.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/src/xdrfile_xtc.o
2024-04-19T11:45:11,041   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/fileformats/xtc -Imoleculekit/fileformats/xtc/include/ -Imoleculekit/fileformats/xtc/ -I/tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/fileformats/xtc/src/xtc.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/src/xtc.o
2024-04-19T11:45:11,854   moleculekit/fileformats/xtc/src/xtc.cpp: In function ‘void xtc_read_new(char*, float*, float*, float*, int*, int, int)’:
2024-04-19T11:45:11,855   moleculekit/fileformats/xtc/src/xtc.cpp:234:37: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2024-04-19T11:45:11,856     234 |                 for (aidx = 0; aidx < natoms; aidx++)
2024-04-19T11:45:11,856         |                                ~~~~~^~~~~~~~
2024-04-19T11:45:11,864   moleculekit/fileformats/xtc/src/xtc.cpp: In function ‘int xtc_write(char*, int, int, int*, float*, float*, float*)’:
2024-04-19T11:45:11,864   moleculekit/fileformats/xtc/src/xtc.cpp:436:23: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2024-04-19T11:45:11,865     436 |         for (f = 0; f < nframes; f++)
2024-04-19T11:45:11,865         |                     ~~^~~~~~~~~
2024-04-19T11:45:11,866   moleculekit/fileformats/xtc/src/xtc.cpp:451:31: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2024-04-19T11:45:11,867     451 |                 for (i = 0; i < natoms; i++)
2024-04-19T11:45:11,867         |                             ~~^~~~~~~~
2024-04-19T11:45:11,870   moleculekit/fileformats/xtc/src/xtc.cpp: In function ‘void xtc_read_frame(char*, float*, float*, float*, int*, int, int, int, int)’:
2024-04-19T11:45:11,870   moleculekit/fileformats/xtc/src/xtc.cpp:541:45: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2024-04-19T11:45:11,871     541 |                         for (aidx = 0; aidx < natoms; aidx++)
2024-04-19T11:45:11,872         |                                        ~~~~~^~~~~~~~
2024-04-19T11:45:11,874   moleculekit/fileformats/xtc/src/xtc.cpp:610:45: warning: comparison of integer expressions of different signedness: ‘uint64_t’ {aka ‘long long unsigned int’} and ‘int’ [-Wsign-compare]
2024-04-19T11:45:11,875     610 |                         for (aidx = 0; aidx < natoms; aidx++)
2024-04-19T11:45:11,876         |                                        ~~~~~^~~~~~~~
2024-04-19T11:45:12,794   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/fileformats/xtc -Imoleculekit/fileformats/xtc/include/ -Imoleculekit/fileformats/xtc/ -I/tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/fileformats/xtc/xtc.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/xtc.o
2024-04-19T11:45:13,100   In file included from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2024-04-19T11:45:13,100                    from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2024-04-19T11:45:13,101                    from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2024-04-19T11:45:13,102                    from moleculekit/fileformats/xtc/xtc.cpp:1269:
2024-04-19T11:45:13,102   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-04-19T11:45:13,103      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-04-19T11:45:13,103         |  ^~~~~~~
2024-04-19T11:45:37,102   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/src/xdrfile.o build/temp.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/src/xdrfile_xtc.o build/temp.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/src/xtc.o build/temp.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/xtc.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/xtc.cpython-311-arm-linux-gnueabihf.so
2024-04-19T11:45:37,383   building 'moleculekit.trr' extension
2024-04-19T11:45:37,384   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/fileformats/xtc -Imoleculekit/fileformats/xtc/include/ -Imoleculekit/fileformats/xtc/ -I/tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/fileformats/xtc/src/xdr_seek.c -o build/temp.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/src/xdr_seek.o
2024-04-19T11:45:37,518   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/fileformats/xtc -Imoleculekit/fileformats/xtc/include/ -Imoleculekit/fileformats/xtc/ -I/tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/fileformats/xtc/src/xdrfile.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/src/xdrfile.o
2024-04-19T11:45:38,195   moleculekit/fileformats/xtc/src/xdrfile.cpp:66:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-04-19T11:45:38,195      66 |         "OK",
2024-04-19T11:45:38,196         |         ^~~~
2024-04-19T11:45:38,197   moleculekit/fileformats/xtc/src/xdrfile.cpp:67:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-04-19T11:45:38,197      67 |         "Header",
2024-04-19T11:45:38,198         |         ^~~~~~~~
2024-04-19T11:45:38,199   moleculekit/fileformats/xtc/src/xdrfile.cpp:68:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-04-19T11:45:38,200      68 |         "String",
2024-04-19T11:45:38,200         |         ^~~~~~~~
2024-04-19T11:45:38,201   moleculekit/fileformats/xtc/src/xdrfile.cpp:69:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-04-19T11:45:38,202      69 |         "Double",
2024-04-19T11:45:38,203         |         ^~~~~~~~
2024-04-19T11:45:38,203   moleculekit/fileformats/xtc/src/xdrfile.cpp:70:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-04-19T11:45:38,204      70 |         "Integer",
2024-04-19T11:45:38,205         |         ^~~~~~~~~
2024-04-19T11:45:38,205   moleculekit/fileformats/xtc/src/xdrfile.cpp:71:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-04-19T11:45:38,206      71 |         "Float",
2024-04-19T11:45:38,206         |         ^~~~~~~
2024-04-19T11:45:38,207   moleculekit/fileformats/xtc/src/xdrfile.cpp:72:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-04-19T11:45:38,208      72 |         "Unsigned integer",
2024-04-19T11:45:38,208         |         ^~~~~~~~~~~~~~~~~~
2024-04-19T11:45:38,209   moleculekit/fileformats/xtc/src/xdrfile.cpp:73:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-04-19T11:45:38,210      73 |         "Compressed 3D coordinate",
2024-04-19T11:45:38,210         |         ^~~~~~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:45:38,211   moleculekit/fileformats/xtc/src/xdrfile.cpp:74:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-04-19T11:45:38,212      74 |         "Closing file",
2024-04-19T11:45:38,213         |         ^~~~~~~~~~~~~~
2024-04-19T11:45:38,213   moleculekit/fileformats/xtc/src/xdrfile.cpp:75:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-04-19T11:45:38,214      75 |         "Magic number",
2024-04-19T11:45:38,215         |         ^~~~~~~~~~~~~~
2024-04-19T11:45:38,216   moleculekit/fileformats/xtc/src/xdrfile.cpp:76:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-04-19T11:45:38,216      76 |         "Not enough memory",
2024-04-19T11:45:38,217         |         ^~~~~~~~~~~~~~~~~~~
2024-04-19T11:45:38,217   moleculekit/fileformats/xtc/src/xdrfile.cpp:77:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-04-19T11:45:38,218      77 |         "End of file",
2024-04-19T11:45:38,218         |         ^~~~~~~~~~~~~
2024-04-19T11:45:38,219   moleculekit/fileformats/xtc/src/xdrfile.cpp:78:9: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings]
2024-04-19T11:45:38,220      78 |         "File not found"
2024-04-19T11:45:38,220         |         ^~~~~~~~~~~~~~~~
2024-04-19T11:45:38,221   moleculekit/fileformats/xtc/src/xdrfile.cpp: In function ‘int sizeofint(int)’:
2024-04-19T11:45:38,221   moleculekit/fileformats/xtc/src/xdrfile.cpp:459:17: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:38,222     459 |     while (size >= num && num_of_bits < 32)
2024-04-19T11:45:38,222         |            ~~~~~^~~~~~
2024-04-19T11:45:38,223   moleculekit/fileformats/xtc/src/xdrfile.cpp: In function ‘int sizeofints(int, unsigned int*)’:
2024-04-19T11:45:38,224   moleculekit/fileformats/xtc/src/xdrfile.cpp:505:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-04-19T11:45:38,224     505 |     while (bytes[num_of_bytes] >= num)
2024-04-19T11:45:38,225         |            ~~~~~~~~~~~~~~~~~~~~^~~~~~
2024-04-19T11:45:38,226   moleculekit/fileformats/xtc/src/xdrfile.cpp: In function ‘void encodeints(int*, int, int, unsigned int*, unsigned int*)’:
2024-04-19T11:45:38,226   moleculekit/fileformats/xtc/src/xdrfile.cpp:614:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:38,227     614 |     if (num_of_bits >= num_of_bytes * 8)
2024-04-19T11:45:38,228         |         ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
2024-04-19T11:45:38,228   moleculekit/fileformats/xtc/src/xdrfile.cpp:616:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:38,229     616 |                 for (i = 0; i < num_of_bytes; i++)
2024-04-19T11:45:38,230         |                             ~~^~~~~~~~~~~~~~
2024-04-19T11:45:38,231   moleculekit/fileformats/xtc/src/xdrfile.cpp:624:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:38,232     624 |                 for (i = 0; i < num_of_bytes-1; i++)
2024-04-19T11:45:38,232         |                             ~~^~~~~~~~~~~~~~~~
2024-04-19T11:45:38,233   moleculekit/fileformats/xtc/src/xdrfile.cpp: In function ‘int decodebits(int*, int)’:
2024-04-19T11:45:38,233   moleculekit/fileformats/xtc/src/xdrfile.cpp:664:30: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-04-19T11:45:38,234     664 |                 if (lastbits < num_of_bits)
2024-04-19T11:45:38,235         |                     ~~~~~~~~~^~~~~~~~~~~~~
2024-04-19T11:45:38,235   moleculekit/fileformats/xtc/src/xdrfile.cpp: In function ‘int xdrfile_decompress_coord_float(float*, int*, float*, XDRFILE*)’:
2024-04-19T11:45:38,236   moleculekit/fileformats/xtc/src/xdrfile.cpp:785:17: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-04-19T11:45:38,237     785 |         if(size3>xfp->buf1size)
2024-04-19T11:45:38,238         |            ~~~~~^~~~~~~~~~~~~~
2024-04-19T11:45:38,238   moleculekit/fileformats/xtc/src/xdrfile.cpp:842:26: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-04-19T11:45:38,240     842 |         maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2024-04-19T11:45:38,240         |                          ^
2024-04-19T11:45:38,241   moleculekit/fileformats/xtc/src/xdrfile.cpp:932:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:38,241     932 |                                 if(countmjh >= size3 ) { return -1; }
2024-04-19T11:45:38,242         |                                    ~~~~~~~~~^~~~~~~~
2024-04-19T11:45:38,242   moleculekit/fileformats/xtc/src/xdrfile.cpp:935:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:38,243     935 |                                 if(countmjh >= size3 ) { return -1; }
2024-04-19T11:45:38,243         |                                    ~~~~~~~~~^~~~~~~~
2024-04-19T11:45:38,244   moleculekit/fileformats/xtc/src/xdrfile.cpp:938:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:38,244     938 |                                 if(countmjh >= size3 ) { return -1; }
2024-04-19T11:45:38,245         |                                    ~~~~~~~~~^~~~~~~~
2024-04-19T11:45:38,245   moleculekit/fileformats/xtc/src/xdrfile.cpp:945:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:38,246     945 |                                 if(countmjh >= size3 ) { return -1; }
2024-04-19T11:45:38,247         |                                    ~~~~~~~~~^~~~~~~~
2024-04-19T11:45:38,247   moleculekit/fileformats/xtc/src/xdrfile.cpp:948:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:38,248     948 |                                 if(countmjh >= size3 ) { return -1; }
2024-04-19T11:45:38,249         |                                    ~~~~~~~~~^~~~~~~~
2024-04-19T11:45:38,249   moleculekit/fileformats/xtc/src/xdrfile.cpp:951:45: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:38,250     951 |                                 if(countmjh >= size3 ) { return -1; }
2024-04-19T11:45:38,251         |                                    ~~~~~~~~~^~~~~~~~
2024-04-19T11:45:38,251   moleculekit/fileformats/xtc/src/xdrfile.cpp:756:24: warning: variable ‘minidx’ set but not used [-Wunused-but-set-variable]
2024-04-19T11:45:38,252     756 |         int smallidx,  minidx, maxidx;
2024-04-19T11:45:38,253         |                        ^~~~~~
2024-04-19T11:45:38,253   moleculekit/fileformats/xtc/src/xdrfile.cpp:759:32: warning: variable ‘larger’ set but not used [-Wunused-but-set-variable]
2024-04-19T11:45:38,254     759 |         int smallnum, smaller, larger, i, is_smaller, run;
2024-04-19T11:45:38,255         |                                ^~~~~~
2024-04-19T11:45:38,255   moleculekit/fileformats/xtc/src/xdrfile.cpp:763:13: warning: unused variable ‘errval’ [-Wunused-variable]
2024-04-19T11:45:38,256     763 |         int errval=1;
2024-04-19T11:45:38,257         |             ^~~~~~
2024-04-19T11:45:38,257   moleculekit/fileformats/xtc/src/xdrfile.cpp: In function ‘int xdrfile_compress_coord_float(float*, int, float, XDRFILE*)’:
2024-04-19T11:45:38,258   moleculekit/fileformats/xtc/src/xdrfile.cpp:1011:17: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-04-19T11:45:38,259    1011 |         if(size3>xfp->buf1size)
2024-04-19T11:45:38,260         |            ~~~~~^~~~~~~~~~~~~~
2024-04-19T11:45:38,260   moleculekit/fileformats/xtc/src/xdrfile.cpp:1068:41: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:38,261    1068 |                 countmjh++; if( countmjh> size3) { return -1; }
2024-04-19T11:45:38,262         |                                 ~~~~~~~~^~~~~~~
2024-04-19T11:45:38,262   moleculekit/fileformats/xtc/src/xdrfile.cpp:1084:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:38,263    1084 |           countmjh++; if( countmjh> size3) { return -1; }
2024-04-19T11:45:38,263         |                           ~~~~~~~~^~~~~~~
2024-04-19T11:45:38,264   moleculekit/fileformats/xtc/src/xdrfile.cpp:1098:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:38,264    1098 |           countmjh++; if( countmjh> size3) { return -1; }
2024-04-19T11:45:38,265         |                           ~~~~~~~~^~~~~~~
2024-04-19T11:45:38,265   moleculekit/fileformats/xtc/src/xdrfile.cpp:1137:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:38,266    1137 |         while (smallidx < LASTIDX && magicints[smallidx] < mindiff)
2024-04-19T11:45:38,266         |                         ^
2024-04-19T11:45:38,267   moleculekit/fileformats/xtc/src/xdrfile.cpp:1143:26: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-04-19T11:45:38,268    1143 |         maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2024-04-19T11:45:38,269         |                          ^
2024-04-19T11:45:38,269   moleculekit/fileformats/xtc/src/xdrfile.cpp:1275:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:38,270    1275 |         if(tmp==(unsigned int)buf2[0])
2024-04-19T11:45:38,271         |            ~~~^~~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:45:38,271   moleculekit/fileformats/xtc/src/xdrfile.cpp:1001:13: warning: variable ‘errval’ set but not used [-Wunused-but-set-variable]
2024-04-19T11:45:38,272    1001 |         int errval;
2024-04-19T11:45:38,273         |             ^~~~~~
2024-04-19T11:45:38,274   moleculekit/fileformats/xtc/src/xdrfile.cpp: In function ‘int xdrfile_decompress_coord_double(double*, int*, double*, XDRFILE*)’:
2024-04-19T11:45:38,274   moleculekit/fileformats/xtc/src/xdrfile.cpp:1316:17: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-04-19T11:45:38,275    1316 |         if(size3>xfp->buf1size)
2024-04-19T11:45:38,276         |            ~~~~~^~~~~~~~~~~~~~
2024-04-19T11:45:38,276   moleculekit/fileformats/xtc/src/xdrfile.cpp:1377:26: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-04-19T11:45:38,277    1377 |         maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2024-04-19T11:45:38,278         |                          ^
2024-04-19T11:45:38,278   moleculekit/fileformats/xtc/src/xdrfile.cpp:1289:32: warning: variable ‘minidx’ set but not used [-Wunused-but-set-variable]
2024-04-19T11:45:38,279    1289 |         int smallidx,  maxidx, minidx;
2024-04-19T11:45:38,279         |                                ^~~~~~
2024-04-19T11:45:38,280   moleculekit/fileformats/xtc/src/xdrfile.cpp:1292:32: warning: variable ‘larger’ set but not used [-Wunused-but-set-variable]
2024-04-19T11:45:38,281    1292 |         int smallnum, smaller, larger, i, is_smaller, run;
2024-04-19T11:45:38,281         |                                ^~~~~~
2024-04-19T11:45:38,282   moleculekit/fileformats/xtc/src/xdrfile.cpp:1297:13: warning: unused variable ‘errval’ [-Wunused-variable]
2024-04-19T11:45:38,283    1297 |         int errval=1;
2024-04-19T11:45:38,284         |             ^~~~~~
2024-04-19T11:45:38,284   moleculekit/fileformats/xtc/src/xdrfile.cpp: In function ‘int xdrfile_compress_coord_double(double*, int, double, XDRFILE*)’:
2024-04-19T11:45:38,285   moleculekit/fileformats/xtc/src/xdrfile.cpp:1513:17: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-04-19T11:45:38,286    1513 |         if(size3>xfp->buf1size) {
2024-04-19T11:45:38,287         |            ~~~~~^~~~~~~~~~~~~~
2024-04-19T11:45:38,287   moleculekit/fileformats/xtc/src/xdrfile.cpp:1628:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:38,288    1628 |         while (smallidx < LASTIDX && magicints[smallidx] < mindiff) {
2024-04-19T11:45:38,288         |                         ^
2024-04-19T11:45:38,289   moleculekit/fileformats/xtc/src/xdrfile.cpp:1633:26: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-04-19T11:45:38,289    1633 |         maxidx = (LASTIDX<tmp) ? LASTIDX : tmp;
2024-04-19T11:45:38,290         |                          ^
2024-04-19T11:45:38,290   moleculekit/fileformats/xtc/src/xdrfile.cpp:1743:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:45:38,291    1743 |         if(tmp==(unsigned int)buf2[0])
2024-04-19T11:45:38,292         |            ~~~^~~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:45:38,292   moleculekit/fileformats/xtc/src/xdrfile.cpp:1504:13: warning: variable ‘errval’ set but not used [-Wunused-but-set-variable]
2024-04-19T11:45:38,293    1504 |         int errval=1;
2024-04-19T11:45:38,293         |             ^~~~~~
2024-04-19T11:45:41,125   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/fileformats/xtc -Imoleculekit/fileformats/xtc/include/ -Imoleculekit/fileformats/xtc/ -I/tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/fileformats/xtc/src/xdrfile_trr.c -o build/temp.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/src/xdrfile_trr.o
2024-04-19T11:45:41,225   moleculekit/fileformats/xtc/src/xdrfile_trr.c: In function ‘do_trnheader’:
2024-04-19T11:45:41,226   moleculekit/fileformats/xtc/src/xdrfile_trr.c:111:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2024-04-19T11:45:41,226     111 |         if (slen != strlen(version)+1)
2024-04-19T11:45:41,227         |                  ^~
2024-04-19T11:45:41,228   moleculekit/fileformats/xtc/src/xdrfile_trr.c:121:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare]
2024-04-19T11:45:41,228     121 |         if (xdrfile_write_string(version,xd) != (strlen(version)+1) )
2024-04-19T11:45:41,229         |                                              ^~
2024-04-19T11:45:41,932   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/fileformats/xtc -Imoleculekit/fileformats/xtc/include/ -Imoleculekit/fileformats/xtc/ -I/tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/fileformats/xtc/trr.c -o build/temp.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/trr.o
2024-04-19T11:45:42,318   In file included from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2024-04-19T11:45:42,318                    from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2024-04-19T11:45:42,319                    from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2024-04-19T11:45:42,320                    from moleculekit/fileformats/xtc/trr.c:1261:
2024-04-19T11:45:42,321   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-04-19T11:45:42,321      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-04-19T11:45:42,322         |  ^~~~~~~
2024-04-19T11:45:43,103   moleculekit/fileformats/xtc/trr.c: In function ‘__pyx_pf_11moleculekit_3trr_17TRRTrajectoryFile_22_calc_len_and_offsets’:
2024-04-19T11:45:43,118   moleculekit/fileformats/xtc/trr.c:16352:37: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘Py_ssize_t’ {aka ‘int’} [-Wsign-compare]
2024-04-19T11:45:43,119   16352 |       __pyx_t_6 = (__pyx_v_n_frames == __pyx_t_14);
2024-04-19T11:45:43,119         |                                     ^~
2024-04-19T11:46:06,532   moleculekit/fileformats/xtc/trr.c: In function ‘__pyx_pw_11moleculekit_3trr_17TRRTrajectoryFile_17_write’:
2024-04-19T11:46:06,532   moleculekit/fileformats/xtc/trr.c:1163:40: warning: ‘__pyx_v_status’ may be used uninitialized [-Wmaybe-uninitialized]
2024-04-19T11:46:06,533    1163 |   #define PyInt_FromLong               PyLong_FromLong
2024-04-19T11:46:06,533         |                                        ^~~~~~~~~~~~~~~
2024-04-19T11:46:06,547   moleculekit/fileformats/xtc/trr.c:14260:7: note: ‘__pyx_v_status’ was declared here
2024-04-19T11:46:06,547   14260 |   int __pyx_v_status;
2024-04-19T11:46:06,548         |       ^~~~~~~~~~~~~~
2024-04-19T11:46:18,205   moleculekit/fileformats/xtc/trr.c: In function ‘__pyx_pf_11moleculekit_3trr_17TRRTrajectoryFile_12_read’:
2024-04-19T11:46:18,216   moleculekit/fileformats/xtc/trr.c:11559:19: warning: ‘__pyx_pybuffernd_forces.diminfo[2].shape’ may be used uninitialized [-Wmaybe-uninitialized]
2024-04-19T11:46:18,217   11559 |         } else if (unlikely(__pyx_t_29 >= __pyx_pybuffernd_forces.diminfo[2].shape)) __pyx_t_4 = 2;
2024-04-19T11:46:18,217         |                   ^
2024-04-19T11:46:18,226   moleculekit/fileformats/xtc/trr.c:10091:21: note: ‘__pyx_pybuffernd_forces.diminfo[2].shape’ was declared here
2024-04-19T11:46:18,227   10091 |   __Pyx_LocalBuf_ND __pyx_pybuffernd_forces;
2024-04-19T11:46:18,227         |                     ^~~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:46:18,236   moleculekit/fileformats/xtc/trr.c:11555:19: warning: ‘__pyx_pybuffernd_forces.diminfo[1].shape’ may be used uninitialized [-Wmaybe-uninitialized]
2024-04-19T11:46:18,237   11555 |         } else if (unlikely(__pyx_t_30 >= __pyx_pybuffernd_forces.diminfo[1].shape)) __pyx_t_4 = 1;
2024-04-19T11:46:18,238         |                   ^
2024-04-19T11:46:18,246   moleculekit/fileformats/xtc/trr.c:10091:21: note: ‘__pyx_pybuffernd_forces.diminfo[1].shape’ was declared here
2024-04-19T11:46:18,247   10091 |   __Pyx_LocalBuf_ND __pyx_pybuffernd_forces;
2024-04-19T11:46:18,247         |                     ^~~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:46:18,248   moleculekit/fileformats/xtc/trr.c:2509:95: warning: ‘__pyx_pybuffernd_forces.diminfo[0].strides’ may be used uninitialized [-Wmaybe-uninitialized]
2024-04-19T11:46:18,249    2509 | #define __Pyx_BufPtrCContig3d(type, buf, i0, s0, i1, s1, i2, s2) ((type)((char*)buf + i0 * s0 + i1 * s1) + i2)
2024-04-19T11:46:18,249         |                                                                                               ^
2024-04-19T11:46:18,258   moleculekit/fileformats/xtc/trr.c:10091:21: note: ‘__pyx_pybuffernd_forces.diminfo[0].strides’ was declared here
2024-04-19T11:46:18,259   10091 |   __Pyx_LocalBuf_ND __pyx_pybuffernd_forces;
2024-04-19T11:46:18,259         |                     ^~~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:46:18,269   moleculekit/fileformats/xtc/trr.c:11549:59: warning: ‘__pyx_pybuffernd_forces.diminfo[0].shape’ may be used uninitialized [-Wmaybe-uninitialized]
2024-04-19T11:46:18,269   11549 |           __pyx_t_28 += __pyx_pybuffernd_forces.diminfo[0].shape;
2024-04-19T11:46:18,270         |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
2024-04-19T11:46:18,278   moleculekit/fileformats/xtc/trr.c:10091:21: note: ‘__pyx_pybuffernd_forces.diminfo[0].shape’ was declared here
2024-04-19T11:46:18,279   10091 |   __Pyx_LocalBuf_ND __pyx_pybuffernd_forces;
2024-04-19T11:46:18,279         |                     ^~~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:46:18,289   moleculekit/fileformats/xtc/trr.c:11502:19: warning: ‘__pyx_pybuffernd_vel.diminfo[2].shape’ may be used uninitialized [-Wmaybe-uninitialized]
2024-04-19T11:46:18,289   11502 |         } else if (unlikely(__pyx_t_30 >= __pyx_pybuffernd_vel.diminfo[2].shape)) __pyx_t_4 = 2;
2024-04-19T11:46:18,290         |                   ^
2024-04-19T11:46:18,299   moleculekit/fileformats/xtc/trr.c:10107:21: note: ‘__pyx_pybuffernd_vel.diminfo[2].shape’ was declared here
2024-04-19T11:46:18,299   10107 |   __Pyx_LocalBuf_ND __pyx_pybuffernd_vel;
2024-04-19T11:46:18,300         |                     ^~~~~~~~~~~~~~~~~~~~
2024-04-19T11:46:18,309   moleculekit/fileformats/xtc/trr.c:11498:19: warning: ‘__pyx_pybuffernd_vel.diminfo[1].shape’ may be used uninitialized [-Wmaybe-uninitialized]
2024-04-19T11:46:18,310   11498 |         } else if (unlikely(__pyx_t_29 >= __pyx_pybuffernd_vel.diminfo[1].shape)) __pyx_t_4 = 1;
2024-04-19T11:46:18,310         |                   ^
2024-04-19T11:46:18,319   moleculekit/fileformats/xtc/trr.c:10107:21: note: ‘__pyx_pybuffernd_vel.diminfo[1].shape’ was declared here
2024-04-19T11:46:18,320   10107 |   __Pyx_LocalBuf_ND __pyx_pybuffernd_vel;
2024-04-19T11:46:18,320         |                     ^~~~~~~~~~~~~~~~~~~~
2024-04-19T11:46:18,321   moleculekit/fileformats/xtc/trr.c:2509:95: warning: ‘__pyx_pybuffernd_vel.diminfo[0].strides’ may be used uninitialized [-Wmaybe-uninitialized]
2024-04-19T11:46:18,321    2509 | #define __Pyx_BufPtrCContig3d(type, buf, i0, s0, i1, s1, i2, s2) ((type)((char*)buf + i0 * s0 + i1 * s1) + i2)
2024-04-19T11:46:18,322         |                                                                                               ^
2024-04-19T11:46:18,331   moleculekit/fileformats/xtc/trr.c:10107:21: note: ‘__pyx_pybuffernd_vel.diminfo[0].strides’ was declared here
2024-04-19T11:46:18,331   10107 |   __Pyx_LocalBuf_ND __pyx_pybuffernd_vel;
2024-04-19T11:46:18,332         |                     ^~~~~~~~~~~~~~~~~~~~
2024-04-19T11:46:18,341   moleculekit/fileformats/xtc/trr.c:11492:56: warning: ‘__pyx_pybuffernd_vel.diminfo[0].shape’ may be used uninitialized [-Wmaybe-uninitialized]
2024-04-19T11:46:18,342   11492 |           __pyx_t_28 += __pyx_pybuffernd_vel.diminfo[0].shape;
2024-04-19T11:46:18,342         |                         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~
2024-04-19T11:46:18,351   moleculekit/fileformats/xtc/trr.c:10107:21: note: ‘__pyx_pybuffernd_vel.diminfo[0].shape’ was declared here
2024-04-19T11:46:18,352   10107 |   __Pyx_LocalBuf_ND __pyx_pybuffernd_vel;
2024-04-19T11:46:18,352         |                     ^~~~~~~~~~~~~~~~~~~~
2024-04-19T11:46:18,362   moleculekit/fileformats/xtc/trr.c:11891:17: warning: ‘__pyx_pybuffernd_xyz_buffer.diminfo[1].shape’ may be used uninitialized [-Wmaybe-uninitialized]
2024-04-19T11:46:18,362   11891 |       } else if (unlikely(__pyx_t_29 >= __pyx_pybuffernd_xyz_buffer.diminfo[1].shape)) __pyx_t_4 = 1;
2024-04-19T11:46:18,363         |                 ^
2024-04-19T11:46:18,372   moleculekit/fileformats/xtc/trr.c:10113:21: note: ‘__pyx_pybuffernd_xyz_buffer.diminfo[1].shape’ was declared here
2024-04-19T11:46:18,372   10113 |   __Pyx_LocalBuf_ND __pyx_pybuffernd_xyz_buffer;
2024-04-19T11:46:18,373         |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:46:18,382   moleculekit/fileformats/xtc/trr.c:11887:17: warning: ‘__pyx_pybuffernd_xyz_buffer.diminfo[0].shape’ may be used uninitialized [-Wmaybe-uninitialized]
2024-04-19T11:46:18,383   11887 |       } else if (unlikely(__pyx_t_30 >= __pyx_pybuffernd_xyz_buffer.diminfo[0].shape)) __pyx_t_4 = 0;
2024-04-19T11:46:18,384         |                 ^
2024-04-19T11:46:18,392   moleculekit/fileformats/xtc/trr.c:10113:21: note: ‘__pyx_pybuffernd_xyz_buffer.diminfo[0].shape’ was declared here
2024-04-19T11:46:18,393   10113 |   __Pyx_LocalBuf_ND __pyx_pybuffernd_xyz_buffer;
2024-04-19T11:46:18,393         |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:46:18,403   moleculekit/fileformats/xtc/trr.c:11732:19: warning: ‘__pyx_pybuffernd_vel_buffer.diminfo[1].shape’ may be used uninitialized [-Wmaybe-uninitialized]
2024-04-19T11:46:18,404   11732 |         } else if (unlikely(__pyx_t_35 >= __pyx_pybuffernd_vel_buffer.diminfo[1].shape)) __pyx_t_4 = 1;
2024-04-19T11:46:18,404         |                   ^
2024-04-19T11:46:18,413   moleculekit/fileformats/xtc/trr.c:10109:21: note: ‘__pyx_pybuffernd_vel_buffer.diminfo[1].shape’ was declared here
2024-04-19T11:46:18,413   10109 |   __Pyx_LocalBuf_ND __pyx_pybuffernd_vel_buffer;
2024-04-19T11:46:18,414         |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:46:18,423   moleculekit/fileformats/xtc/trr.c:11728:19: warning: ‘__pyx_pybuffernd_vel_buffer.diminfo[0].shape’ may be used uninitialized [-Wmaybe-uninitialized]
2024-04-19T11:46:18,424   11728 |         } else if (unlikely(__pyx_t_36 >= __pyx_pybuffernd_vel_buffer.diminfo[0].shape)) __pyx_t_4 = 0;
2024-04-19T11:46:18,424         |                   ^
2024-04-19T11:46:18,433   moleculekit/fileformats/xtc/trr.c:10109:21: note: ‘__pyx_pybuffernd_vel_buffer.diminfo[0].shape’ was declared here
2024-04-19T11:46:18,434   10109 |   __Pyx_LocalBuf_ND __pyx_pybuffernd_vel_buffer;
2024-04-19T11:46:18,434         |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:46:18,444   moleculekit/fileformats/xtc/trr.c:11784:19: warning: ‘__pyx_pybuffernd_forces_buffer.diminfo[1].shape’ may be used uninitialized [-Wmaybe-uninitialized]
2024-04-19T11:46:18,445   11784 |         } else if (unlikely(__pyx_t_36 >= __pyx_pybuffernd_forces_buffer.diminfo[1].shape)) __pyx_t_4 = 1;
2024-04-19T11:46:18,445         |                   ^
2024-04-19T11:46:18,454   moleculekit/fileformats/xtc/trr.c:10093:21: note: ‘__pyx_pybuffernd_forces_buffer.diminfo[1].shape’ was declared here
2024-04-19T11:46:18,454   10093 |   __Pyx_LocalBuf_ND __pyx_pybuffernd_forces_buffer;
2024-04-19T11:46:18,455         |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:46:18,464   moleculekit/fileformats/xtc/trr.c:11780:19: warning: ‘__pyx_pybuffernd_forces_buffer.diminfo[0].shape’ may be used uninitialized [-Wmaybe-uninitialized]
2024-04-19T11:46:18,465   11780 |         } else if (unlikely(__pyx_t_35 >= __pyx_pybuffernd_forces_buffer.diminfo[0].shape)) __pyx_t_4 = 0;
2024-04-19T11:46:18,466         |                   ^
2024-04-19T11:46:18,474   moleculekit/fileformats/xtc/trr.c:10093:21: note: ‘__pyx_pybuffernd_forces_buffer.diminfo[0].shape’ was declared here
2024-04-19T11:46:18,475   10093 |   __Pyx_LocalBuf_ND __pyx_pybuffernd_forces_buffer;
2024-04-19T11:46:18,476         |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2024-04-19T11:46:25,009   arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/src/xdr_seek.o build/temp.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/src/xdrfile.o build/temp.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/src/xdrfile_trr.o build/temp.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/trr.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/trr.cpython-311-arm-linux-gnueabihf.so
2024-04-19T11:46:25,178   building 'moleculekit.dcd' extension
2024-04-19T11:46:25,179   creating build/temp.linux-armv7l-cpython-311/moleculekit/fileformats/dcd
2024-04-19T11:46:25,180   creating build/temp.linux-armv7l-cpython-311/moleculekit/fileformats/dcd/src
2024-04-19T11:46:25,182   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/fileformats/dcd -Imoleculekit/fileformats/dcd/include/ -Imoleculekit/fileformats/dcd/ -I/tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/fileformats/dcd/dcd.c -o build/temp.linux-armv7l-cpython-311/moleculekit/fileformats/dcd/dcd.o
2024-04-19T11:46:25,578   In file included from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2024-04-19T11:46:25,579                    from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2024-04-19T11:46:25,579                    from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2024-04-19T11:46:25,580                    from moleculekit/fileformats/dcd/dcd.c:1256:
2024-04-19T11:46:25,580   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-04-19T11:46:25,581      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-04-19T11:46:25,581         |  ^~~~~~~
2024-04-19T11:46:26,866   In file included from moleculekit/fileformats/dcd/include/dcdplugin.h:1,
2024-04-19T11:46:26,867                    from moleculekit/fileformats/dcd/dcd.c:1262:
2024-04-19T11:46:26,868   moleculekit/fileformats/dcd/include/fastio.h:474:12: warning: ‘fio_write_str’ defined but not used [-Wunused-function]
2024-04-19T11:46:26,868     474 | static int fio_write_str(fio_fd fd, const char *str) {
2024-04-19T11:46:26,869         |            ^~~~~~~~~~~~~
2024-04-19T11:46:26,869   moleculekit/fileformats/dcd/include/fastio.h:470:12: warning: ‘fio_read_int32’ defined but not used [-Wunused-function]
2024-04-19T11:46:26,870     470 | static int fio_read_int32(fio_fd fd, int *i) {
2024-04-19T11:46:26,870         |            ^~~~~~~~~~~~~~
2024-04-19T11:46:26,871   moleculekit/fileformats/dcd/include/fastio.h:466:12: warning: ‘fio_write_int32’ defined but not used [-Wunused-function]
2024-04-19T11:46:26,872     466 | static int fio_write_int32(fio_fd fd, int i) {
2024-04-19T11:46:26,872         |            ^~~~~~~~~~~~~~~
2024-04-19T11:46:26,873   moleculekit/fileformats/dcd/include/fastio.h:457:19: warning: ‘fio_ftell’ defined but not used [-Wunused-function]
2024-04-19T11:46:26,873     457 | static fio_size_t fio_ftell(fio_fd fd) {
2024-04-19T11:46:26,874         |                   ^~~~~~~~~
2024-04-19T11:46:26,875   moleculekit/fileformats/dcd/include/fastio.h:450:19: warning: ‘fio_fseek’ defined but not used [-Wunused-function]
2024-04-19T11:46:26,875     450 | static fio_size_t fio_fseek(fio_fd fd, fio_size_t offset, int whence) {
2024-04-19T11:46:26,876         |                   ^~~~~~~~~
2024-04-19T11:46:26,877   moleculekit/fileformats/dcd/include/fastio.h:415:19: warning: ‘fio_readv’ defined but not used [-Wunused-function]
2024-04-19T11:46:26,878     415 | static fio_size_t fio_readv(fio_fd fd, const fio_iovec * iov, int iovcnt) {
2024-04-19T11:46:26,879         |                   ^~~~~~~~~
2024-04-19T11:46:26,880   moleculekit/fileformats/dcd/include/fastio.h:394:12: warning: ‘fio_fclose’ defined but not used [-Wunused-function]
2024-04-19T11:46:26,880     394 | static int fio_fclose(fio_fd fd) {
2024-04-19T11:46:26,881         |            ^~~~~~~~~~
2024-04-19T11:46:26,882   moleculekit/fileformats/dcd/include/fastio.h:366:12: warning: ‘fio_open’ defined but not used [-Wunused-function]
2024-04-19T11:46:26,882     366 | static int fio_open(const char *filename, int mode, fio_fd *fd) {
2024-04-19T11:46:26,883         |            ^~~~~~~~
2024-04-19T11:46:41,293   moleculekit/fileformats/dcd/dcd.c: In function ‘__pyx_pf_11moleculekit_3dcd_17DCDTrajectoryFile_18read’:
2024-04-19T11:46:41,293   moleculekit/fileformats/dcd/dcd.c:1158:40: warning: ‘__pyx_v_i’ may be used uninitialized [-Wmaybe-uninitialized]
2024-04-19T11:46:41,294    1158 |   #define PyInt_FromLong               PyLong_FromLong
2024-04-19T11:46:41,295         |                                        ^~~~~~~~~~~~~~~
2024-04-19T11:46:41,301   moleculekit/fileformats/dcd/dcd.c:8022:7: note: ‘__pyx_v_i’ was declared here
2024-04-19T11:46:41,301    8022 |   int __pyx_v_i;
2024-04-19T11:46:41,302         |       ^~~~~~~~~
2024-04-19T11:46:44,682   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/fileformats/dcd -Imoleculekit/fileformats/dcd/include/ -Imoleculekit/fileformats/dcd/ -I/tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/fileformats/dcd/src/dcdplugin.c -o build/temp.linux-armv7l-cpython-311/moleculekit/fileformats/dcd/src/dcdplugin.o
2024-04-19T11:46:44,901   moleculekit/fileformats/dcd/src/dcdplugin.c: In function ‘read_dcdheader’:
2024-04-19T11:46:44,902   moleculekit/fileformats/dcd/src/dcdplugin.c:150:55: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-04-19T11:46:44,903     150 |   else if (input_integer[0] == 84 && input_integer[1] == dcdcordmagic)
2024-04-19T11:46:44,903         |                                                       ^~
2024-04-19T11:46:44,904   moleculekit/fileformats/dcd/src/dcdplugin.c:173:54: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-04-19T11:46:44,905     173 |       if (input_integer[0] == 84 && input_integer[1] == dcdcordmagic)
2024-04-19T11:46:44,905         |                                                      ^~
2024-04-19T11:46:44,906   moleculekit/fileformats/dcd/src/dcdplugin.c:194:26: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-04-19T11:46:44,907     194 |     if (input_integer[0] != dcdcordmagic)
2024-04-19T11:46:44,907         |                          ^~
2024-04-19T11:46:44,911   moleculekit/fileformats/dcd/src/dcdplugin.c:409:47: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-04-19T11:46:44,912     409 |     if ((input_integer[0] + input_integer[1]) != ((*N) - (*NAMNF)) * 4)
2024-04-19T11:46:44,913         |                                               ^~
2024-04-19T11:46:44,914   moleculekit/fileformats/dcd/src/dcdplugin.c:428:47: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
2024-04-19T11:46:44,914     428 |     if ((input_integer[0] + input_integer[1]) != ((*N) - (*NAMNF)) * 4)
2024-04-19T11:46:44,915         |                                               ^~
2024-04-19T11:46:44,920   moleculekit/fileformats/dcd/src/dcdplugin.c: In function ‘read_dcdstep’:
2024-04-19T11:46:44,920   moleculekit/fileformats/dcd/src/dcdplugin.c:651:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:46:44,921     651 |         if (tmpbuf[i] != sizeof(float) * N)
2024-04-19T11:46:44,922         |                       ^~
2024-04-19T11:46:44,922   moleculekit/fileformats/dcd/src/dcdplugin.c:659:49: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
2024-04-19T11:46:44,923     659 |         if ((tmpbuf[2 * i] + tmpbuf[2 * i + 1]) != sizeof(float) * N)
2024-04-19T11:46:44,924         |                                                 ^~
2024-04-19T11:46:44,951   In file included from moleculekit/fileformats/dcd/src/dcdplugin.c:55:
2024-04-19T11:46:44,952   moleculekit/fileformats/dcd/include/endianswap.h: At top level:
2024-04-19T11:46:44,953   moleculekit/fileformats/dcd/include/endianswap.h:96:13: warning: ‘swap2_aligned’ defined but not used [-Wunused-function]
2024-04-19T11:46:44,953      96 | static void swap2_aligned(void *v, long ndata) {
2024-04-19T11:46:44,955         |             ^~~~~~~~~~~~~
2024-04-19T11:46:44,955   moleculekit/fileformats/dcd/include/endianswap.h:32:13: warning: ‘swap2_unaligned’ defined but not used [-Wunused-function]
2024-04-19T11:46:44,956      32 | static void swap2_unaligned(void *v, long ndata) {
2024-04-19T11:46:44,956         |             ^~~~~~~~~~~~~~~
2024-04-19T11:46:44,957   In file included from moleculekit/fileformats/dcd/src/dcdplugin.c:46:
2024-04-19T11:46:44,957   moleculekit/fileformats/dcd/include/fastio.h:474:12: warning: ‘fio_write_str’ defined but not used [-Wunused-function]
2024-04-19T11:46:44,958     474 | static int fio_write_str(fio_fd fd, const char *str) {
2024-04-19T11:46:44,958         |            ^~~~~~~~~~~~~
2024-04-19T11:46:44,959   moleculekit/fileformats/dcd/include/fastio.h:470:12: warning: ‘fio_read_int32’ defined but not used [-Wunused-function]
2024-04-19T11:46:44,959     470 | static int fio_read_int32(fio_fd fd, int *i) {
2024-04-19T11:46:44,960         |            ^~~~~~~~~~~~~~
2024-04-19T11:46:46,237   arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/fileformats/dcd/dcd.o build/temp.linux-armv7l-cpython-311/moleculekit/fileformats/dcd/src/dcdplugin.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/dcd.cpython-311-arm-linux-gnueabihf.so
2024-04-19T11:46:46,370   building 'moleculekit.binpos' extension
2024-04-19T11:46:46,371   creating build/temp.linux-armv7l-cpython-311/moleculekit/fileformats/binpos
2024-04-19T11:46:46,371   creating build/temp.linux-armv7l-cpython-311/moleculekit/fileformats/binpos/src
2024-04-19T11:46:46,372   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/fileformats/binpos -Imoleculekit/fileformats/binpos/include/ -Imoleculekit/fileformats/binpos/ -I/tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/fileformats/binpos/binpos.c -o build/temp.linux-armv7l-cpython-311/moleculekit/fileformats/binpos/binpos.o
2024-04-19T11:46:46,794   In file included from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929,
2024-04-19T11:46:46,795                    from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12,
2024-04-19T11:46:46,795                    from /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/arrayobject.h:5,
2024-04-19T11:46:46,796                    from moleculekit/fileformats/binpos/binpos.c:1256:
2024-04-19T11:46:46,797   /tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
2024-04-19T11:46:46,797      17 | #warning "Using deprecated NumPy API, disable it with " \
2024-04-19T11:46:46,798         |  ^~~~~~~
2024-04-19T11:47:01,349   In function ‘__pyx_pf_11moleculekit_6binpos_20BINPOSTrajectoryFile_6_read’,
2024-04-19T11:47:01,350       inlined from ‘__pyx_pw_11moleculekit_6binpos_20BINPOSTrajectoryFile_7_read’ at moleculekit/fileformats/binpos/binpos.c:7504:13:
2024-04-19T11:47:01,358   moleculekit/fileformats/binpos/binpos.c:8045:6: warning: ‘__pyx_v_status’ may be used uninitialized [-Wmaybe-uninitialized]
2024-04-19T11:47:01,358    8045 |   if (__pyx_t_1) {
2024-04-19T11:47:01,359         |      ^
2024-04-19T11:47:01,360   moleculekit/fileformats/binpos/binpos.c: In function ‘__pyx_pw_11moleculekit_6binpos_20BINPOSTrajectoryFile_7_read’:
2024-04-19T11:47:01,366   moleculekit/fileformats/binpos/binpos.c:7522:7: note: ‘__pyx_v_status’ was declared here
2024-04-19T11:47:01,367    7522 |   int __pyx_v_status;
2024-04-19T11:47:01,368         |       ^~~~~~~~~~~~~~
2024-04-19T11:47:01,369   moleculekit/fileformats/binpos/binpos.c:1158:40: warning: ‘__pyx_v_i’ may be used uninitialized [-Wmaybe-uninitialized]
2024-04-19T11:47:01,370    1158 |   #define PyInt_FromLong               PyLong_FromLong
2024-04-19T11:47:01,370         |                                        ^~~~~~~~~~~~~~~
2024-04-19T11:47:01,377   moleculekit/fileformats/binpos/binpos.c:7519:7: note: ‘__pyx_v_i’ was declared here
2024-04-19T11:47:01,378    7519 |   int __pyx_v_i;
2024-04-19T11:47:01,378         |       ^~~~~~~~~
2024-04-19T11:47:04,839   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/fileformats/binpos -Imoleculekit/fileformats/binpos/include/ -Imoleculekit/fileformats/binpos/ -I/tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/fileformats/binpos/src/binposplugin.c -o build/temp.linux-armv7l-cpython-311/moleculekit/fileformats/binpos/src/binposplugin.o
2024-04-19T11:47:05,180   arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/fileformats/binpos/binpos.o build/temp.linux-armv7l-cpython-311/moleculekit/fileformats/binpos/src/binposplugin.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/binpos.cpython-311-arm-linux-gnueabihf.so
2024-04-19T11:47:05,305   building 'moleculekit.tmalign' extension
2024-04-19T11:47:05,306   creating build/temp.linux-armv7l-cpython-311/moleculekit/tmalign
2024-04-19T11:47:05,307   creating build/temp.linux-armv7l-cpython-311/moleculekit/tmalign/src
2024-04-19T11:47:05,308   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/tmalign -Imoleculekit/tmalign/include/ -Imoleculekit/tmalign/ -I/tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/tmalign/src/TMAlign.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/tmalign/src/TMAlign.o -w
2024-04-19T11:47:39,172   arm-linux-gnueabihf-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -Imoleculekit/tmalign -Imoleculekit/tmalign/include/ -Imoleculekit/tmalign/ -I/tmp/pip-build-env-ot2ws_un/overlay/local/lib/python3.11/dist-packages/numpy/core/include -I/usr/include/python3.11 -c moleculekit/tmalign/tmalign_util.cpp -o build/temp.linux-armv7l-cpython-311/moleculekit/tmalign/tmalign_util.o -w
2024-04-19T11:48:01,668   In file included from /usr/include/c++/12/vector:70,
2024-04-19T11:48:01,668                    from moleculekit/tmalign/tmalign_util.cpp:1280:
2024-04-19T11:48:01,669   /usr/include/c++/12/bits/vector.tcc: In member function ‘void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]’:
2024-04-19T11:48:01,669   /usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type ‘std::vector<double>::iterator’ changed in GCC 7.1
2024-04-19T11:48:01,670     439 |       vector<_Tp, _Alloc>::
2024-04-19T11:48:01,671         |       ^~~~~~~~~~~~~~~~~~~
2024-04-19T11:48:02,474   In file included from /usr/include/c++/12/vector:64:
2024-04-19T11:48:02,474   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2024-04-19T11:48:02,475       inlined from ‘PyObject* __pyx_pf_11moleculekit_7tmalign_tmalign(PyObject*, __Pyx_memviewslice, __Pyx_memviewslice, std::string, std::string)’ at moleculekit/tmalign/tmalign_util.cpp:20779:32,
2024-04-19T11:48:02,476       inlined from ‘PyObject* __pyx_pw_11moleculekit_7tmalign_1tmalign(PyObject*, PyObject* const*, Py_ssize_t, PyObject*)’ at moleculekit/tmalign/tmalign_util.cpp:20264:52:
2024-04-19T11:48:02,477   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2024-04-19T11:48:02,478    1287 |           _M_realloc_insert(end(), __x);
2024-04-19T11:48:02,478         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2024-04-19T11:48:02,479   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2024-04-19T11:48:02,479       inlined from ‘PyObject* __pyx_pf_11moleculekit_7tmalign_tmalign(PyObject*, __Pyx_memviewslice, __Pyx_memviewslice, std::string, std::string)’ at moleculekit/tmalign/tmalign_util.cpp:20793:33,
2024-04-19T11:48:02,480       inlined from ‘PyObject* __pyx_pw_11moleculekit_7tmalign_1tmalign(PyObject*, PyObject* const*, Py_ssize_t, PyObject*)’ at moleculekit/tmalign/tmalign_util.cpp:20264:52:
2024-04-19T11:48:02,480   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2024-04-19T11:48:02,481    1287 |           _M_realloc_insert(end(), __x);
2024-04-19T11:48:02,481         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2024-04-19T11:48:02,482   In member function ‘void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]’,
2024-04-19T11:48:02,482       inlined from ‘PyObject* __pyx_pf_11moleculekit_7tmalign_tmalign(PyObject*, __Pyx_memviewslice, __Pyx_memviewslice, std::string, std::string)’ at moleculekit/tmalign/tmalign_util.cpp:20878:34,
2024-04-19T11:48:02,483       inlined from ‘PyObject* __pyx_pw_11moleculekit_7tmalign_1tmalign(PyObject*, PyObject* const*, Py_ssize_t, PyObject*)’ at moleculekit/tmalign/tmalign_util.cpp:20264:52:
2024-04-19T11:48:02,483   /usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type ‘__gnu_cxx::__normal_iterator<double*, std::vector<double> >’ changed in GCC 7.1
2024-04-19T11:48:02,484    1287 |           _M_realloc_insert(end(), __x);
2024-04-19T11:48:02,484         |           ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
2024-04-19T11:48:04,873   arm-linux-gnueabihf-g++ -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 build/temp.linux-armv7l-cpython-311/moleculekit/tmalign/src/TMAlign.o build/temp.linux-armv7l-cpython-311/moleculekit/tmalign/tmalign_util.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-311/moleculekit/tmalign.cpython-311-arm-linux-gnueabihf.so
2024-04-19T11:48:05,255   UPDATING build/lib.linux-armv7l-cpython-311/moleculekit/_version.py
2024-04-19T11:48:05,255   set build/lib.linux-armv7l-cpython-311/moleculekit/_version.py to '1.8.31'
2024-04-19T11:48:05,256   installing to build/bdist.linux-armv7l/wheel
2024-04-19T11:48:05,256   running install
2024-04-19T11:48:05,280   running install_lib
2024-04-19T11:48:05,286   creating build/bdist.linux-armv7l
2024-04-19T11:48:05,286   creating build/bdist.linux-armv7l/wheel
2024-04-19T11:48:05,289   creating build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:05,290   copying build/lib.linux-armv7l-cpython-311/moleculekit/bondguesser.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:05,293   copying build/lib.linux-armv7l-cpython-311/moleculekit/version.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:05,295   creating build/bdist.linux-armv7l/wheel/moleculekit/fileformats
2024-04-19T11:48:05,297   creating build/bdist.linux-armv7l/wheel/moleculekit/fileformats/dcd
2024-04-19T11:48:05,299   creating build/bdist.linux-armv7l/wheel/moleculekit/fileformats/dcd/src
2024-04-19T11:48:05,300   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/dcd/src/dcdplugin.c -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/dcd/src
2024-04-19T11:48:05,303   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/dcd/dcd.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/dcd
2024-04-19T11:48:05,306   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/dcd/dcd.c -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/dcd
2024-04-19T11:48:05,321   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/dcd/dcdlib.pxd -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/dcd
2024-04-19T11:48:05,323   creating build/bdist.linux-armv7l/wheel/moleculekit/fileformats/dcd/include
2024-04-19T11:48:05,324   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/dcd/include/dcdplugin.h -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/dcd/include
2024-04-19T11:48:05,326   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/dcd/include/fastio.h -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/dcd/include
2024-04-19T11:48:05,329   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/dcd/include/largefiles.h -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/dcd/include
2024-04-19T11:48:05,331   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/dcd/include/endianswap.h -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/dcd/include
2024-04-19T11:48:05,333   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/dcd/include/molfile_plugin.h -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/dcd/include
2024-04-19T11:48:05,337   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/utils.py -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats
2024-04-19T11:48:05,339   creating build/bdist.linux-armv7l/wheel/moleculekit/fileformats/binpos
2024-04-19T11:48:05,341   creating build/bdist.linux-armv7l/wheel/moleculekit/fileformats/binpos/src
2024-04-19T11:48:05,342   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/binpos/src/binposplugin.c -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/binpos/src
2024-04-19T11:48:05,345   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/binpos/binposlib.pxd -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/binpos
2024-04-19T11:48:05,347   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/binpos/binpos.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/binpos
2024-04-19T11:48:05,349   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/binpos/binpos.c -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/binpos
2024-04-19T11:48:05,364   creating build/bdist.linux-armv7l/wheel/moleculekit/fileformats/binpos/include
2024-04-19T11:48:05,365   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/binpos/include/largefiles.h -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/binpos/include
2024-04-19T11:48:05,367   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/binpos/include/binposplugin.h -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/binpos/include
2024-04-19T11:48:05,369   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/binpos/include/molfile_plugin.h -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/binpos/include
2024-04-19T11:48:05,372   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats
2024-04-19T11:48:05,375   creating build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc
2024-04-19T11:48:05,376   creating build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc/src
2024-04-19T11:48:05,378   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/src/xdrfile.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc/src
2024-04-19T11:48:05,381   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/src/xtc.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc/src
2024-04-19T11:48:05,384   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/src/xdrfile_xtc.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc/src
2024-04-19T11:48:05,386   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/src/xdr_seek.c -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc/src
2024-04-19T11:48:05,388   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/src/xdrfile_trr.c -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc/src
2024-04-19T11:48:05,391   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/trr.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc
2024-04-19T11:48:05,394   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/xtc.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc
2024-04-19T11:48:05,414   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/trr.c -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc
2024-04-19T11:48:05,443   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/xdrlib.pxd -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc
2024-04-19T11:48:05,445   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/trrlib.pxd -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc
2024-04-19T11:48:05,448   creating build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc/include
2024-04-19T11:48:05,450   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/include/trr_header.h -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc/include
2024-04-19T11:48:05,452   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/include/xdr_seek.h -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc/include
2024-04-19T11:48:05,455   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/include/xdrfile_trr.h -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc/include
2024-04-19T11:48:05,457   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/include/xdrfile_xtc.h -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc/include
2024-04-19T11:48:05,460   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/include/xdrfile.h -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc/include
2024-04-19T11:48:05,463   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/include/xtc.h -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc/include
2024-04-19T11:48:05,466   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/xtc.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc
2024-04-19T11:48:05,468   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/xtc/xtclib.pxd -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats/xtc
2024-04-19T11:48:05,471   copying build/lib.linux-armv7l-cpython-311/moleculekit/fileformats/netcdf.py -> build/bdist.linux-armv7l/wheel/moleculekit/fileformats
2024-04-19T11:48:05,474   copying build/lib.linux-armv7l-cpython-311/moleculekit/vmdgraphics.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:05,477   copying build/lib.linux-armv7l-cpython-311/moleculekit/wrapping.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:05,508   copying build/lib.linux-armv7l-cpython-311/moleculekit/dihedral.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:05,510   copying build/lib.linux-armv7l-cpython-311/moleculekit/cython_utils.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:05,531   copying build/lib.linux-armv7l-cpython-311/moleculekit/rdkitintegration.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:05,533   creating build/bdist.linux-armv7l/wheel/moleculekit/distance_utils
2024-04-19T11:48:05,534   copying build/lib.linux-armv7l-cpython-311/moleculekit/distance_utils/distance_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/distance_utils
2024-04-19T11:48:05,537   copying build/lib.linux-armv7l-cpython-311/moleculekit/distance_utils/distance_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/distance_utils
2024-04-19T11:48:05,559   creating build/bdist.linux-armv7l/wheel/moleculekit/projections
2024-04-19T11:48:05,560   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricgyration.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2024-04-19T11:48:05,562   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/util.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2024-04-19T11:48:05,564   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metriccoordinate.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2024-04-19T11:48:05,566   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricsasa.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2024-04-19T11:48:05,569   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricfluctuation.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2024-04-19T11:48:05,571   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricsecondarystructure.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2024-04-19T11:48:05,573   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metrictmscore.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2024-04-19T11:48:05,575   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricplumed2.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2024-04-19T11:48:05,578   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricshell.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2024-04-19T11:48:05,580   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2024-04-19T11:48:05,582   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/projection.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2024-04-19T11:48:05,584   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricdihedral.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2024-04-19T11:48:05,586   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricdistance.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2024-04-19T11:48:05,589   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricrmsd.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2024-04-19T11:48:05,591   copying build/lib.linux-armv7l-cpython-311/moleculekit/projections/metricsphericalcoordinate.py -> build/bdist.linux-armv7l/wheel/moleculekit/projections
2024-04-19T11:48:05,593   copying build/lib.linux-armv7l-cpython-311/moleculekit/occupancy_utils.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:05,615   copying build/lib.linux-armv7l-cpython-311/moleculekit/vmdviewer.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:05,618   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions
2024-04-19T11:48:05,619   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2024-04-19T11:48:05,641   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/interactions.py -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2024-04-19T11:48:05,644   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/sigmahole
2024-04-19T11:48:05,645   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole/sigmahole.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/sigmahole
2024-04-19T11:48:05,666   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/sigmahole/sigmahole.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/sigmahole
2024-04-19T11:48:05,668   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/hbonds.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2024-04-19T11:48:05,691   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/pipi.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2024-04-19T11:48:05,719   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/hbonds
2024-04-19T11:48:05,720   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/hbonds/hbonds.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/hbonds
2024-04-19T11:48:05,722   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/hbonds/hbonds.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/hbonds
2024-04-19T11:48:05,740   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/cationpi.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2024-04-19T11:48:05,765   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/interactions
2024-04-19T11:48:05,767   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/cationpi
2024-04-19T11:48:05,768   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/cationpi/cationpi.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/cationpi
2024-04-19T11:48:05,771   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/cationpi/cationpi.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/cationpi
2024-04-19T11:48:05,790   creating build/bdist.linux-armv7l/wheel/moleculekit/interactions/pipi
2024-04-19T11:48:05,791   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/pipi/pipi.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/pipi
2024-04-19T11:48:05,793   copying build/lib.linux-armv7l-cpython-311/moleculekit/interactions/pipi/pipi.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/interactions/pipi
2024-04-19T11:48:05,813   creating build/bdist.linux-armv7l/wheel/moleculekit/cython_utils
2024-04-19T11:48:05,814   copying build/lib.linux-armv7l-cpython-311/moleculekit/cython_utils/cython_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/cython_utils
2024-04-19T11:48:05,817   copying build/lib.linux-armv7l-cpython-311/moleculekit/cython_utils/cython_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/cython_utils
2024-04-19T11:48:05,836   copying build/lib.linux-armv7l-cpython-311/moleculekit/distance_utils.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:05,862   copying build/lib.linux-armv7l-cpython-311/moleculekit/util.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:05,864   copying build/lib.linux-armv7l-cpython-311/moleculekit/molecule.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:05,869   copying build/lib.linux-armv7l-cpython-311/moleculekit/binpos.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:05,880   copying build/lib.linux-armv7l-cpython-311/moleculekit/bondguesser_utils.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:05,903   copying build/lib.linux-armv7l-cpython-311/moleculekit/rcsb.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:05,905   copying build/lib.linux-armv7l-cpython-311/moleculekit/pymolgraphics.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:05,907   copying build/lib.linux-armv7l-cpython-311/moleculekit/opm.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:05,909   copying build/lib.linux-armv7l-cpython-311/moleculekit/xtc.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:05,933   copying build/lib.linux-armv7l-cpython-311/moleculekit/logging.ini -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:05,935   copying build/lib.linux-armv7l-cpython-311/moleculekit/viewer.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:05,937   copying build/lib.linux-armv7l-cpython-311/moleculekit/trr.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:05,961   copying build/lib.linux-armv7l-cpython-311/moleculekit/distance.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:05,963   copying build/lib.linux-armv7l-cpython-311/moleculekit/align.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:05,965   creating build/bdist.linux-armv7l/wheel/moleculekit/wrapping
2024-04-19T11:48:05,967   copying build/lib.linux-armv7l-cpython-311/moleculekit/wrapping/wrapping.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/wrapping
2024-04-19T11:48:05,988   copying build/lib.linux-armv7l-cpython-311/moleculekit/wrapping/wrapping.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/wrapping
2024-04-19T11:48:05,991   creating build/bdist.linux-armv7l/wheel/moleculekit/bondguesser_utils
2024-04-19T11:48:05,992   copying build/lib.linux-armv7l-cpython-311/moleculekit/bondguesser_utils/bondguesser_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/bondguesser_utils
2024-04-19T11:48:06,012   copying build/lib.linux-armv7l-cpython-311/moleculekit/bondguesser_utils/bondguesser_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/bondguesser_utils
2024-04-19T11:48:06,014   copying build/lib.linux-armv7l-cpython-311/moleculekit/tmalign.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:06,061   copying build/lib.linux-armv7l-cpython-311/moleculekit/_version.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:06,063   copying build/lib.linux-armv7l-cpython-311/moleculekit/vmd_wrapper -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:06,065   creating build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2024-04-19T11:48:06,067   creating build/bdist.linux-armv7l/wheel/moleculekit/tmalign/src
2024-04-19T11:48:06,069   copying build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/src/TMAlign.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign/src
2024-04-19T11:48:06,074   copying build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/tmalign_util.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2024-04-19T11:48:06,092   copying build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/tmalignlib.pxd -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2024-04-19T11:48:06,094   creating build/bdist.linux-armv7l/wheel/moleculekit/tmalign/include
2024-04-19T11:48:06,095   copying build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/include/TMAlign.h -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign/include
2024-04-19T11:48:06,097   copying build/lib.linux-armv7l-cpython-311/moleculekit/tmalign/tmalign_util.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/tmalign
2024-04-19T11:48:06,100   copying build/lib.linux-armv7l-cpython-311/moleculekit/config.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:06,101   copying build/lib.linux-armv7l-cpython-311/moleculekit/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:06,103   creating build/bdist.linux-armv7l/wheel/moleculekit/share
2024-04-19T11:48:06,104   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/opm_sequences.json -> build/bdist.linux-armv7l/wheel/moleculekit/share
2024-04-19T11:48:06,295   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/ALA.cif -> build/bdist.linux-armv7l/wheel/moleculekit/share
2024-04-19T11:48:06,298   creating build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr
2024-04-19T11:48:06,302   creating build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,303   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/DPP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,305   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/GME.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,308   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/TPO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,310   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/DA2.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,312   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/DAH.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,315   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MME.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,317   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/4IN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,319   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/4PH.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,321   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HLX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,323   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CCS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,325   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/LYZ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,327   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/LMQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,329   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/0A1.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,332   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/2ML.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,334   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/DA2.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,336   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HHK.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,338   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/1MH.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,340   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/LYZ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,343   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/APD.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,345   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/BCS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,347   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HHK.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,349   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ME0.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,352   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ESC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,354   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/OCY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,356   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MLZ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,358   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MEN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,360   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/PRK.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,363   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NAL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,365   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/IGL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,367   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CGU.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,369   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/4IN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,371   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/PTR.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,374   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MMO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,376   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HTR.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,378   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/2GX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,381   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/2ML.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,383   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MEN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,385   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/0AF.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,388   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/IIL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,390   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NZC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,392   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/.gitkeep -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,394   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/IGL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,396   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/DAB.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,399   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MVA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,401   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/GHG.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
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2024-04-19T11:48:06,405   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HOX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,408   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NLE.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,410   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/KYN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,413   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/OMX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,415   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MLY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,417   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/1MH.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,419   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CSA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,421   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/0A1.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,423   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/PCA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,425   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ONL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,428   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CCS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,430   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CSP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,432   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/PRK.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,434   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ORM.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,437   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/4PH.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,439   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ALY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,441   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HYP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,443   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/FGL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,445   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/TY2.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,448   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/SEP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,450   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/P1L.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,452   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ABA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,454   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CGU.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,456   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/DAB.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,458   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/AHP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
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2024-04-19T11:48:06,463   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/GME.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,465   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/004.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,468   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HLU.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,470   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CSO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,472   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HYP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,475   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/D4P.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,477   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/DAH.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,479   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MMO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,481   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CSS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,484   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HLX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,486   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/YNM.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,488   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CSS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,490   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MVA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,492   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ESC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,494   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/GNC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,497   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/BTK.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,500   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NAL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,502   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/I2M.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,504   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/0BN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,506   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NCY.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,509   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ALY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,511   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HPE.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,513   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/SEP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,515   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/LME.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,517   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HTR.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,519   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MEA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,521   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/TRO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,523   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/DPP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,525   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ME0.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,527   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ALN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,529   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/BB8.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,532   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/KYN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,534   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/IML.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,536   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/PTR.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,538   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/5JP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,540   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/BCS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,542   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CSP.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,544   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/YNM.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,546   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/BB8.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,548   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/PCA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,550   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HQA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,553   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ORM.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,554   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ALC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,557   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/M3L.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,559   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/2GX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,561   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MEQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,563   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MEQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,565   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/TPO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,567   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NZC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,569   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/2MR.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,572   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/LMQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,574   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/P1L.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,576   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/0AF.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,578   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/03Y.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,581   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/AA4.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,583   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NCY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,585   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/5JP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,588   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/GHG.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,590   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/2AS.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,592   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ONL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,594   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/YCM.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,597   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HPE.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,599   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MLZ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,601   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MME.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,603   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ALN.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,605   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ABA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,608   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MLY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,610   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/TRO.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,612   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/FGL.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,614   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/4PQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,617   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/I2M.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,619   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/BTK.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,621   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MLE.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,623   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NLE.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,625   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/LME.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,627   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/2MR.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,629   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/4PQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,632   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/IIL.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,634   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/OCY.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,636   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/ALC.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,638   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/OMX.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,640   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/M3L.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,643   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MEA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,645   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/MLE.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,647   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NVA.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,649   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HQA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,652   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/APD.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,654   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/0BN.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,656   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/NVA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,658   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/TYQ.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,661   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/TY2.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,662   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/YCM.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,664   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HLU.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,666   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/GNC.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,669   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/HOX.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,671   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/AHP.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,673   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/2AS.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,675   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/AA4.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,677   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CSO.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,679   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/D4P.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,681   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/IML.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,683   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/TYQ.xml -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,685   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/pdb2pqr/residues/CSA.dat -> build/bdist.linux-armv7l/wheel/moleculekit/share/pdb2pqr/residues
2024-04-19T11:48:06,688   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/backbone.cif -> build/bdist.linux-armv7l/wheel/moleculekit/share
2024-04-19T11:48:06,690   creating build/bdist.linux-armv7l/wheel/moleculekit/share/atomselect
2024-04-19T11:48:06,692   copying build/lib.linux-armv7l-cpython-311/moleculekit/share/atomselect/atomselect.json -> build/bdist.linux-armv7l/wheel/moleculekit/share/atomselect
2024-04-19T11:48:06,694   copying build/lib.linux-armv7l-cpython-311/moleculekit/readers.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:06,699   copying build/lib.linux-armv7l-cpython-311/moleculekit/dcd.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:06,714   creating build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2024-04-19T11:48:06,715   copying build/lib.linux-armv7l-cpython-311/moleculekit/atomselect/atomselect.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2024-04-19T11:48:06,718   copying build/lib.linux-armv7l-cpython-311/moleculekit/atomselect/analyze.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2024-04-19T11:48:06,720   copying build/lib.linux-armv7l-cpython-311/moleculekit/atomselect/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2024-04-19T11:48:06,722   copying build/lib.linux-armv7l-cpython-311/moleculekit/atomselect/languageparser.py -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect
2024-04-19T11:48:06,724   copying build/lib.linux-armv7l-cpython-311/moleculekit/writers.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:06,728   creating build/bdist.linux-armv7l/wheel/moleculekit/occupancy_utils
2024-04-19T11:48:06,729   copying build/lib.linux-armv7l-cpython-311/moleculekit/occupancy_utils/occupancy_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/occupancy_utils
2024-04-19T11:48:06,748   copying build/lib.linux-armv7l-cpython-311/moleculekit/occupancy_utils/occupancy_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/occupancy_utils
2024-04-19T11:48:06,750   creating build/bdist.linux-armv7l/wheel/moleculekit/atomselect_utils
2024-04-19T11:48:06,751   copying build/lib.linux-armv7l-cpython-311/moleculekit/atomselect_utils/atomselect_utils.cpp -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect_utils
2024-04-19T11:48:06,774   copying build/lib.linux-armv7l-cpython-311/moleculekit/atomselect_utils/atomselect_utils.pyx -> build/bdist.linux-armv7l/wheel/moleculekit/atomselect_utils
2024-04-19T11:48:06,777   copying build/lib.linux-armv7l-cpython-311/moleculekit/periodictable.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:06,780   creating build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2024-04-19T11:48:06,780   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/test_smallmollib.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2024-04-19T11:48:06,783   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/smallmolcdp.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2024-04-19T11:48:06,785   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/util.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2024-04-19T11:48:06,788   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/test_smallmol.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2024-04-19T11:48:06,790   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/smallmol.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2024-04-19T11:48:06,793   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2024-04-19T11:48:06,795   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/smallmollib.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol
2024-04-19T11:48:06,798   creating build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2024-04-19T11:48:06,799   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools/restrainedembed.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2024-04-19T11:48:06,801   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools/clustering.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2024-04-19T11:48:06,803   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2024-04-19T11:48:06,805   copying build/lib.linux-armv7l-cpython-311/moleculekit/smallmol/tools/test_tools.py -> build/bdist.linux-armv7l/wheel/moleculekit/smallmol/tools
2024-04-19T11:48:06,808   copying build/lib.linux-armv7l-cpython-311/moleculekit/atomselect_utils.cpython-311-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:06,832   creating build/bdist.linux-armv7l/wheel/moleculekit/tools
2024-04-19T11:48:06,833   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/autosegment.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2024-04-19T11:48:06,835   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/preparation_customres.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2024-04-19T11:48:06,838   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/docking.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2024-04-19T11:48:06,840   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/voxeldescriptors.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2024-04-19T11:48:06,842   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/modelling.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2024-04-19T11:48:06,845   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/graphalignment.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2024-04-19T11:48:06,848   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/crystalpacking.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2024-04-19T11:48:06,850   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/preparation.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2024-04-19T11:48:06,853   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/moleculechecks.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2024-04-19T11:48:06,855   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2024-04-19T11:48:06,857   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/sequencestructuralalignment.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2024-04-19T11:48:06,859   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/detect.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2024-04-19T11:48:06,862   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/hhblitsprofile.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2024-04-19T11:48:06,864   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/atomtyper.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools
2024-04-19T11:48:06,866   creating build/bdist.linux-armv7l/wheel/moleculekit/tools/obabel_tools
2024-04-19T11:48:06,867   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/obabel_tools/obabel_cli.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools/obabel_tools
2024-04-19T11:48:06,869   copying build/lib.linux-armv7l-cpython-311/moleculekit/tools/obabel_tools/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/tools/obabel_tools
2024-04-19T11:48:06,871   creating build/bdist.linux-armv7l/wheel/moleculekit/ply
2024-04-19T11:48:06,872   copying build/lib.linux-armv7l-cpython-311/moleculekit/ply/lex.py -> build/bdist.linux-armv7l/wheel/moleculekit/ply
2024-04-19T11:48:06,875   copying build/lib.linux-armv7l-cpython-311/moleculekit/ply/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/ply
2024-04-19T11:48:06,877   copying build/lib.linux-armv7l-cpython-311/moleculekit/ply/yacc.py -> build/bdist.linux-armv7l/wheel/moleculekit/ply
2024-04-19T11:48:06,881   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx
2024-04-19T11:48:06,882   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx/writer
2024-04-19T11:48:06,883   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/writer/PdbxWriter.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/writer
2024-04-19T11:48:06,886   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/writer/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/writer
2024-04-19T11:48:06,888   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2024-04-19T11:48:06,889   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests/PdbxWriterTests.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2024-04-19T11:48:06,891   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests/PdbxReadWriteTests.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2024-04-19T11:48:06,893   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests/PdbxReaderTests.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2024-04-19T11:48:06,895   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/tests/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/tests
2024-04-19T11:48:06,896   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx
2024-04-19T11:48:06,898   creating build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2024-04-19T11:48:06,900   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader/PdbxReader.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2024-04-19T11:48:06,902   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader/PdbxParser.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2024-04-19T11:48:06,905   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader/__init__.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2024-04-19T11:48:06,906   copying build/lib.linux-armv7l-cpython-311/moleculekit/pdbx/reader/PdbxContainers.py -> build/bdist.linux-armv7l/wheel/moleculekit/pdbx/reader
2024-04-19T11:48:06,908   copying build/lib.linux-armv7l-cpython-311/moleculekit/home.py -> build/bdist.linux-armv7l/wheel/moleculekit
2024-04-19T11:48:06,910   running install_egg_info
2024-04-19T11:48:06,915   Copying moleculekit.egg-info to build/bdist.linux-armv7l/wheel/moleculekit-1.8.31-py3.11.egg-info
2024-04-19T11:48:06,927   running install_scripts
2024-04-19T11:48:06,998   creating build/bdist.linux-armv7l/wheel/moleculekit-1.8.31.dist-info/WHEEL
2024-04-19T11:48:07,001   creating '/tmp/pip-wheel-har0ro7r/.tmp-w33gwty1/moleculekit-1.8.31-cp311-cp311-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-04-19T11:48:07,005   adding 'moleculekit/__init__.py'
2024-04-19T11:48:07,007   adding 'moleculekit/_version.py'
2024-04-19T11:48:07,009   adding 'moleculekit/align.py'
2024-04-19T11:48:07,337   adding 'moleculekit/atomselect_utils.cpython-311-arm-linux-gnueabihf.so'
2024-04-19T11:48:07,497   adding 'moleculekit/binpos.cpython-311-arm-linux-gnueabihf.so'
2024-04-19T11:48:07,503   adding 'moleculekit/bondguesser.py'
2024-04-19T11:48:07,748   adding 'moleculekit/bondguesser_utils.cpython-311-arm-linux-gnueabihf.so'
2024-04-19T11:48:07,756   adding 'moleculekit/config.py'
2024-04-19T11:48:08,016   adding 'moleculekit/cython_utils.cpython-311-arm-linux-gnueabihf.so'
2024-04-19T11:48:08,177   adding 'moleculekit/dcd.cpython-311-arm-linux-gnueabihf.so'
2024-04-19T11:48:08,182   adding 'moleculekit/dihedral.py'
2024-04-19T11:48:08,184   adding 'moleculekit/distance.py'
2024-04-19T11:48:08,502   adding 'moleculekit/distance_utils.cpython-311-arm-linux-gnueabihf.so'
2024-04-19T11:48:08,513   adding 'moleculekit/home.py'
2024-04-19T11:48:08,514   adding 'moleculekit/logging.ini'
2024-04-19T11:48:08,528   adding 'moleculekit/molecule.py'
2024-04-19T11:48:08,757   adding 'moleculekit/occupancy_utils.cpython-311-arm-linux-gnueabihf.so'
2024-04-19T11:48:08,765   adding 'moleculekit/opm.py'
2024-04-19T11:48:08,768   adding 'moleculekit/periodictable.py'
2024-04-19T11:48:08,769   adding 'moleculekit/pymolgraphics.py'
2024-04-19T11:48:08,770   adding 'moleculekit/rcsb.py'
2024-04-19T11:48:08,772   adding 'moleculekit/rdkitintegration.py'
2024-04-19T11:48:08,785   adding 'moleculekit/readers.py'
2024-04-19T11:48:09,384   adding 'moleculekit/tmalign.cpython-311-arm-linux-gnueabihf.so'
2024-04-19T11:48:09,687   adding 'moleculekit/trr.cpython-311-arm-linux-gnueabihf.so'
2024-04-19T11:48:09,699   adding 'moleculekit/util.py'
2024-04-19T11:48:09,700   adding 'moleculekit/version.py'
2024-04-19T11:48:09,702   adding 'moleculekit/viewer.py'
2024-04-19T11:48:09,703   adding 'moleculekit/vmd_wrapper'
2024-04-19T11:48:09,705   adding 'moleculekit/vmdgraphics.py'
2024-04-19T11:48:09,707   adding 'moleculekit/vmdviewer.py'
2024-04-19T11:48:09,961   adding 'moleculekit/wrapping.cpython-311-arm-linux-gnueabihf.so'
2024-04-19T11:48:09,975   adding 'moleculekit/writers.py'
2024-04-19T11:48:10,236   adding 'moleculekit/xtc.cpython-311-arm-linux-gnueabihf.so'
2024-04-19T11:48:10,245   adding 'moleculekit/atomselect/__init__.py'
2024-04-19T11:48:10,246   adding 'moleculekit/atomselect/analyze.py'
2024-04-19T11:48:10,249   adding 'moleculekit/atomselect/atomselect.py'
2024-04-19T11:48:10,251   adding 'moleculekit/atomselect/languageparser.py'
2024-04-19T11:48:10,354   adding 'moleculekit/atomselect_utils/atomselect_utils.cpp'
2024-04-19T11:48:10,365   adding 'moleculekit/atomselect_utils/atomselect_utils.pyx'
2024-04-19T11:48:10,456   adding 'moleculekit/bondguesser_utils/bondguesser_utils.cpp'
2024-04-19T11:48:10,465   adding 'moleculekit/bondguesser_utils/bondguesser_utils.pyx'
2024-04-19T11:48:10,553   adding 'moleculekit/cython_utils/cython_utils.cpp'
2024-04-19T11:48:10,562   adding 'moleculekit/cython_utils/cython_utils.pyx'
2024-04-19T11:48:10,664   adding 'moleculekit/distance_utils/distance_utils.cpp'
2024-04-19T11:48:10,675   adding 'moleculekit/distance_utils/distance_utils.pyx'
2024-04-19T11:48:10,676   adding 'moleculekit/fileformats/__init__.py'
2024-04-19T11:48:10,681   adding 'moleculekit/fileformats/netcdf.py'
2024-04-19T11:48:10,683   adding 'moleculekit/fileformats/utils.py'
2024-04-19T11:48:10,743   adding 'moleculekit/fileformats/binpos/binpos.c'
2024-04-19T11:48:10,750   adding 'moleculekit/fileformats/binpos/binpos.pyx'
2024-04-19T11:48:10,752   adding 'moleculekit/fileformats/binpos/binposlib.pxd'
2024-04-19T11:48:10,753   adding 'moleculekit/fileformats/binpos/include/binposplugin.h'
2024-04-19T11:48:10,754   adding 'moleculekit/fileformats/binpos/include/largefiles.h'
2024-04-19T11:48:10,760   adding 'moleculekit/fileformats/binpos/include/molfile_plugin.h'
2024-04-19T11:48:10,762   adding 'moleculekit/fileformats/binpos/src/binposplugin.c'
2024-04-19T11:48:10,825   adding 'moleculekit/fileformats/dcd/dcd.c'
2024-04-19T11:48:10,832   adding 'moleculekit/fileformats/dcd/dcd.pyx'
2024-04-19T11:48:10,834   adding 'moleculekit/fileformats/dcd/dcdlib.pxd'
2024-04-19T11:48:10,835   adding 'moleculekit/fileformats/dcd/include/dcdplugin.h'
2024-04-19T11:48:10,837   adding 'moleculekit/fileformats/dcd/include/endianswap.h'
2024-04-19T11:48:10,839   adding 'moleculekit/fileformats/dcd/include/fastio.h'
2024-04-19T11:48:10,840   adding 'moleculekit/fileformats/dcd/include/largefiles.h'
2024-04-19T11:48:10,845   adding 'moleculekit/fileformats/dcd/include/molfile_plugin.h'
2024-04-19T11:48:10,850   adding 'moleculekit/fileformats/dcd/src/dcdplugin.c'
2024-04-19T11:48:10,944   adding 'moleculekit/fileformats/xtc/trr.c'
2024-04-19T11:48:10,956   adding 'moleculekit/fileformats/xtc/trr.pyx'
2024-04-19T11:48:10,957   adding 'moleculekit/fileformats/xtc/trrlib.pxd'
2024-04-19T11:48:10,958   adding 'moleculekit/fileformats/xtc/xdrlib.pxd'
2024-04-19T11:48:11,047   adding 'moleculekit/fileformats/xtc/xtc.cpp'
2024-04-19T11:48:11,055   adding 'moleculekit/fileformats/xtc/xtc.pyx'
2024-04-19T11:48:11,056   adding 'moleculekit/fileformats/xtc/xtclib.pxd'
2024-04-19T11:48:11,058   adding 'moleculekit/fileformats/xtc/include/trr_header.h'
2024-04-19T11:48:11,059   adding 'moleculekit/fileformats/xtc/include/xdr_seek.h'
2024-04-19T11:48:11,062   adding 'moleculekit/fileformats/xtc/include/xdrfile.h'
2024-04-19T11:48:11,063   adding 'moleculekit/fileformats/xtc/include/xdrfile_trr.h'
2024-04-19T11:48:11,064   adding 'moleculekit/fileformats/xtc/include/xdrfile_xtc.h'
2024-04-19T11:48:11,066   adding 'moleculekit/fileformats/xtc/include/xtc.h'
2024-04-19T11:48:11,067   adding 'moleculekit/fileformats/xtc/src/xdr_seek.c'
2024-04-19T11:48:11,074   adding 'moleculekit/fileformats/xtc/src/xdrfile.cpp'
2024-04-19T11:48:11,076   adding 'moleculekit/fileformats/xtc/src/xdrfile_trr.c'
2024-04-19T11:48:11,078   adding 'moleculekit/fileformats/xtc/src/xdrfile_xtc.cpp'
2024-04-19T11:48:11,080   adding 'moleculekit/fileformats/xtc/src/xtc.cpp'
2024-04-19T11:48:11,082   adding 'moleculekit/interactions/__init__.py'
2024-04-19T11:48:11,362   adding 'moleculekit/interactions/cationpi.cpython-311-arm-linux-gnueabihf.so'
2024-04-19T11:48:11,628   adding 'moleculekit/interactions/hbonds.cpython-311-arm-linux-gnueabihf.so'
2024-04-19T11:48:11,639   adding 'moleculekit/interactions/interactions.py'
2024-04-19T11:48:11,916   adding 'moleculekit/interactions/pipi.cpython-311-arm-linux-gnueabihf.so'
2024-04-19T11:48:12,198   adding 'moleculekit/interactions/sigmahole.cpython-311-arm-linux-gnueabihf.so'
2024-04-19T11:48:12,298   adding 'moleculekit/interactions/cationpi/cationpi.cpp'
2024-04-19T11:48:12,307   adding 'moleculekit/interactions/cationpi/cationpi.pyx'
2024-04-19T11:48:12,397   adding 'moleculekit/interactions/hbonds/hbonds.cpp'
2024-04-19T11:48:12,406   adding 'moleculekit/interactions/hbonds/hbonds.pyx'
2024-04-19T11:48:12,511   adding 'moleculekit/interactions/pipi/pipi.cpp'
2024-04-19T11:48:12,520   adding 'moleculekit/interactions/pipi/pipi.pyx'
2024-04-19T11:48:12,610   adding 'moleculekit/interactions/sigmahole/sigmahole.cpp'
2024-04-19T11:48:12,619   adding 'moleculekit/interactions/sigmahole/sigmahole.pyx'
2024-04-19T11:48:12,706   adding 'moleculekit/occupancy_utils/occupancy_utils.cpp'
2024-04-19T11:48:12,714   adding 'moleculekit/occupancy_utils/occupancy_utils.pyx'
2024-04-19T11:48:12,715   adding 'moleculekit/pdbx/__init__.py'
2024-04-19T11:48:12,719   adding 'moleculekit/pdbx/reader/PdbxContainers.py'
2024-04-19T11:48:12,722   adding 'moleculekit/pdbx/reader/PdbxParser.py'
2024-04-19T11:48:12,724   adding 'moleculekit/pdbx/reader/PdbxReader.py'
2024-04-19T11:48:12,725   adding 'moleculekit/pdbx/reader/__init__.py'
2024-04-19T11:48:12,727   adding 'moleculekit/pdbx/tests/PdbxReadWriteTests.py'
2024-04-19T11:48:12,729   adding 'moleculekit/pdbx/tests/PdbxReaderTests.py'
2024-04-19T11:48:12,730   adding 'moleculekit/pdbx/tests/PdbxWriterTests.py'
2024-04-19T11:48:12,731   adding 'moleculekit/pdbx/tests/__init__.py'
2024-04-19T11:48:12,733   adding 'moleculekit/pdbx/writer/PdbxWriter.py'
2024-04-19T11:48:12,734   adding 'moleculekit/pdbx/writer/__init__.py'
2024-04-19T11:48:12,736   adding 'moleculekit/ply/__init__.py'
2024-04-19T11:48:12,740   adding 'moleculekit/ply/lex.py'
2024-04-19T11:48:12,752   adding 'moleculekit/ply/yacc.py'
2024-04-19T11:48:12,754   adding 'moleculekit/projections/__init__.py'
2024-04-19T11:48:12,756   adding 'moleculekit/projections/metriccoordinate.py'
2024-04-19T11:48:12,759   adding 'moleculekit/projections/metricdihedral.py'
2024-04-19T11:48:12,763   adding 'moleculekit/projections/metricdistance.py'
2024-04-19T11:48:12,765   adding 'moleculekit/projections/metricfluctuation.py'
2024-04-19T11:48:12,767   adding 'moleculekit/projections/metricgyration.py'
2024-04-19T11:48:12,771   adding 'moleculekit/projections/metricplumed2.py'
2024-04-19T11:48:12,772   adding 'moleculekit/projections/metricrmsd.py'
2024-04-19T11:48:12,775   adding 'moleculekit/projections/metricsasa.py'
2024-04-19T11:48:12,777   adding 'moleculekit/projections/metricsecondarystructure.py'
2024-04-19T11:48:12,778   adding 'moleculekit/projections/metricshell.py'
2024-04-19T11:48:12,780   adding 'moleculekit/projections/metricsphericalcoordinate.py'
2024-04-19T11:48:12,781   adding 'moleculekit/projections/metrictmscore.py'
2024-04-19T11:48:12,783   adding 'moleculekit/projections/projection.py'
2024-04-19T11:48:12,784   adding 'moleculekit/projections/util.py'
2024-04-19T11:48:12,786   adding 'moleculekit/share/ALA.cif'
2024-04-19T11:48:12,788   adding 'moleculekit/share/backbone.cif'
2024-04-19T11:48:14,250   adding 'moleculekit/share/opm_sequences.json'
2024-04-19T11:48:14,335   adding 'moleculekit/share/atomselect/atomselect.json'
2024-04-19T11:48:14,339   adding 'moleculekit/share/pdb2pqr/residues/.gitkeep'
2024-04-19T11:48:14,340   adding 'moleculekit/share/pdb2pqr/residues/004.dat'
2024-04-19T11:48:14,342   adding 'moleculekit/share/pdb2pqr/residues/004.xml'
2024-04-19T11:48:14,343   adding 'moleculekit/share/pdb2pqr/residues/03Y.dat'
2024-04-19T11:48:14,344   adding 'moleculekit/share/pdb2pqr/residues/03Y.xml'
2024-04-19T11:48:14,345   adding 'moleculekit/share/pdb2pqr/residues/0A1.dat'
2024-04-19T11:48:14,346   adding 'moleculekit/share/pdb2pqr/residues/0A1.xml'
2024-04-19T11:48:14,348   adding 'moleculekit/share/pdb2pqr/residues/0AF.dat'
2024-04-19T11:48:14,349   adding 'moleculekit/share/pdb2pqr/residues/0AF.xml'
2024-04-19T11:48:14,350   adding 'moleculekit/share/pdb2pqr/residues/0BN.dat'
2024-04-19T11:48:14,351   adding 'moleculekit/share/pdb2pqr/residues/0BN.xml'
2024-04-19T11:48:14,353   adding 'moleculekit/share/pdb2pqr/residues/1MH.dat'
2024-04-19T11:48:14,354   adding 'moleculekit/share/pdb2pqr/residues/1MH.xml'
2024-04-19T11:48:14,355   adding 'moleculekit/share/pdb2pqr/residues/2AS.dat'
2024-04-19T11:48:14,356   adding 'moleculekit/share/pdb2pqr/residues/2AS.xml'
2024-04-19T11:48:14,357   adding 'moleculekit/share/pdb2pqr/residues/2GX.dat'
2024-04-19T11:48:14,359   adding 'moleculekit/share/pdb2pqr/residues/2GX.xml'
2024-04-19T11:48:14,360   adding 'moleculekit/share/pdb2pqr/residues/2ML.dat'
2024-04-19T11:48:14,361   adding 'moleculekit/share/pdb2pqr/residues/2ML.xml'
2024-04-19T11:48:14,362   adding 'moleculekit/share/pdb2pqr/residues/2MR.dat'
2024-04-19T11:48:14,363   adding 'moleculekit/share/pdb2pqr/residues/2MR.xml'
2024-04-19T11:48:14,364   adding 'moleculekit/share/pdb2pqr/residues/4IN.dat'
2024-04-19T11:48:14,366   adding 'moleculekit/share/pdb2pqr/residues/4IN.xml'
2024-04-19T11:48:14,367   adding 'moleculekit/share/pdb2pqr/residues/4PH.dat'
2024-04-19T11:48:14,368   adding 'moleculekit/share/pdb2pqr/residues/4PH.xml'
2024-04-19T11:48:14,369   adding 'moleculekit/share/pdb2pqr/residues/4PQ.dat'
2024-04-19T11:48:14,370   adding 'moleculekit/share/pdb2pqr/residues/4PQ.xml'
2024-04-19T11:48:14,371   adding 'moleculekit/share/pdb2pqr/residues/5JP.dat'
2024-04-19T11:48:14,373   adding 'moleculekit/share/pdb2pqr/residues/5JP.xml'
2024-04-19T11:48:14,374   adding 'moleculekit/share/pdb2pqr/residues/AA4.dat'
2024-04-19T11:48:14,375   adding 'moleculekit/share/pdb2pqr/residues/AA4.xml'
2024-04-19T11:48:14,376   adding 'moleculekit/share/pdb2pqr/residues/ABA.dat'
2024-04-19T11:48:14,378   adding 'moleculekit/share/pdb2pqr/residues/ABA.xml'
2024-04-19T11:48:14,379   adding 'moleculekit/share/pdb2pqr/residues/AHP.dat'
2024-04-19T11:48:14,380   adding 'moleculekit/share/pdb2pqr/residues/AHP.xml'
2024-04-19T11:48:14,381   adding 'moleculekit/share/pdb2pqr/residues/ALC.dat'
2024-04-19T11:48:14,382   adding 'moleculekit/share/pdb2pqr/residues/ALC.xml'
2024-04-19T11:48:14,383   adding 'moleculekit/share/pdb2pqr/residues/ALN.dat'
2024-04-19T11:48:14,385   adding 'moleculekit/share/pdb2pqr/residues/ALN.xml'
2024-04-19T11:48:14,386   adding 'moleculekit/share/pdb2pqr/residues/ALY.dat'
2024-04-19T11:48:14,387   adding 'moleculekit/share/pdb2pqr/residues/ALY.xml'
2024-04-19T11:48:14,388   adding 'moleculekit/share/pdb2pqr/residues/APD.dat'
2024-04-19T11:48:14,389   adding 'moleculekit/share/pdb2pqr/residues/APD.xml'
2024-04-19T11:48:14,391   adding 'moleculekit/share/pdb2pqr/residues/BB8.dat'
2024-04-19T11:48:14,392   adding 'moleculekit/share/pdb2pqr/residues/BB8.xml'
2024-04-19T11:48:14,393   adding 'moleculekit/share/pdb2pqr/residues/BCS.dat'
2024-04-19T11:48:14,394   adding 'moleculekit/share/pdb2pqr/residues/BCS.xml'
2024-04-19T11:48:14,396   adding 'moleculekit/share/pdb2pqr/residues/BTK.dat'
2024-04-19T11:48:14,397   adding 'moleculekit/share/pdb2pqr/residues/BTK.xml'
2024-04-19T11:48:14,398   adding 'moleculekit/share/pdb2pqr/residues/CCS.dat'
2024-04-19T11:48:14,399   adding 'moleculekit/share/pdb2pqr/residues/CCS.xml'
2024-04-19T11:48:14,400   adding 'moleculekit/share/pdb2pqr/residues/CGU.dat'
2024-04-19T11:48:14,402   adding 'moleculekit/share/pdb2pqr/residues/CGU.xml'
2024-04-19T11:48:14,403   adding 'moleculekit/share/pdb2pqr/residues/CSA.dat'
2024-04-19T11:48:14,404   adding 'moleculekit/share/pdb2pqr/residues/CSA.xml'
2024-04-19T11:48:14,405   adding 'moleculekit/share/pdb2pqr/residues/CSO.dat'
2024-04-19T11:48:14,406   adding 'moleculekit/share/pdb2pqr/residues/CSO.xml'
2024-04-19T11:48:14,408   adding 'moleculekit/share/pdb2pqr/residues/CSP.dat'
2024-04-19T11:48:14,409   adding 'moleculekit/share/pdb2pqr/residues/CSP.xml'
2024-04-19T11:48:14,410   adding 'moleculekit/share/pdb2pqr/residues/CSS.dat'
2024-04-19T11:48:14,411   adding 'moleculekit/share/pdb2pqr/residues/CSS.xml'
2024-04-19T11:48:14,412   adding 'moleculekit/share/pdb2pqr/residues/D4P.dat'
2024-04-19T11:48:14,414   adding 'moleculekit/share/pdb2pqr/residues/D4P.xml'
2024-04-19T11:48:14,415   adding 'moleculekit/share/pdb2pqr/residues/DA2.dat'
2024-04-19T11:48:14,416   adding 'moleculekit/share/pdb2pqr/residues/DA2.xml'
2024-04-19T11:48:14,417   adding 'moleculekit/share/pdb2pqr/residues/DAB.dat'
2024-04-19T11:48:14,418   adding 'moleculekit/share/pdb2pqr/residues/DAB.xml'
2024-04-19T11:48:14,420   adding 'moleculekit/share/pdb2pqr/residues/DAH.dat'
2024-04-19T11:48:14,421   adding 'moleculekit/share/pdb2pqr/residues/DAH.xml'
2024-04-19T11:48:14,422   adding 'moleculekit/share/pdb2pqr/residues/DPP.dat'
2024-04-19T11:48:14,423   adding 'moleculekit/share/pdb2pqr/residues/DPP.xml'
2024-04-19T11:48:14,424   adding 'moleculekit/share/pdb2pqr/residues/ESC.dat'
2024-04-19T11:48:14,425   adding 'moleculekit/share/pdb2pqr/residues/ESC.xml'
2024-04-19T11:48:14,426   adding 'moleculekit/share/pdb2pqr/residues/FGL.dat'
2024-04-19T11:48:14,427   adding 'moleculekit/share/pdb2pqr/residues/FGL.xml'
2024-04-19T11:48:14,428   adding 'moleculekit/share/pdb2pqr/residues/GHG.dat'
2024-04-19T11:48:14,430   adding 'moleculekit/share/pdb2pqr/residues/GHG.xml'
2024-04-19T11:48:14,431   adding 'moleculekit/share/pdb2pqr/residues/GME.dat'
2024-04-19T11:48:14,432   adding 'moleculekit/share/pdb2pqr/residues/GME.xml'
2024-04-19T11:48:14,433   adding 'moleculekit/share/pdb2pqr/residues/GNC.dat'
2024-04-19T11:48:14,434   adding 'moleculekit/share/pdb2pqr/residues/GNC.xml'
2024-04-19T11:48:14,435   adding 'moleculekit/share/pdb2pqr/residues/HHK.dat'
2024-04-19T11:48:14,437   adding 'moleculekit/share/pdb2pqr/residues/HHK.xml'
2024-04-19T11:48:14,438   adding 'moleculekit/share/pdb2pqr/residues/HLU.dat'
2024-04-19T11:48:14,439   adding 'moleculekit/share/pdb2pqr/residues/HLU.xml'
2024-04-19T11:48:14,440   adding 'moleculekit/share/pdb2pqr/residues/HLX.dat'
2024-04-19T11:48:14,442   adding 'moleculekit/share/pdb2pqr/residues/HLX.xml'
2024-04-19T11:48:14,443   adding 'moleculekit/share/pdb2pqr/residues/HOX.dat'
2024-04-19T11:48:14,444   adding 'moleculekit/share/pdb2pqr/residues/HOX.xml'
2024-04-19T11:48:14,445   adding 'moleculekit/share/pdb2pqr/residues/HPE.dat'
2024-04-19T11:48:14,446   adding 'moleculekit/share/pdb2pqr/residues/HPE.xml'
2024-04-19T11:48:14,448   adding 'moleculekit/share/pdb2pqr/residues/HQA.dat'
2024-04-19T11:48:14,449   adding 'moleculekit/share/pdb2pqr/residues/HQA.xml'
2024-04-19T11:48:14,450   adding 'moleculekit/share/pdb2pqr/residues/HTR.dat'
2024-04-19T11:48:14,451   adding 'moleculekit/share/pdb2pqr/residues/HTR.xml'
2024-04-19T11:48:14,452   adding 'moleculekit/share/pdb2pqr/residues/HYP.dat'
2024-04-19T11:48:14,454   adding 'moleculekit/share/pdb2pqr/residues/HYP.xml'
2024-04-19T11:48:14,455   adding 'moleculekit/share/pdb2pqr/residues/I2M.dat'
2024-04-19T11:48:14,456   adding 'moleculekit/share/pdb2pqr/residues/I2M.xml'
2024-04-19T11:48:14,457   adding 'moleculekit/share/pdb2pqr/residues/IGL.dat'
2024-04-19T11:48:14,459   adding 'moleculekit/share/pdb2pqr/residues/IGL.xml'
2024-04-19T11:48:14,460   adding 'moleculekit/share/pdb2pqr/residues/IIL.dat'
2024-04-19T11:48:14,461   adding 'moleculekit/share/pdb2pqr/residues/IIL.xml'
2024-04-19T11:48:14,462   adding 'moleculekit/share/pdb2pqr/residues/IML.dat'
2024-04-19T11:48:14,464   adding 'moleculekit/share/pdb2pqr/residues/IML.xml'
2024-04-19T11:48:14,465   adding 'moleculekit/share/pdb2pqr/residues/KYN.dat'
2024-04-19T11:48:14,466   adding 'moleculekit/share/pdb2pqr/residues/KYN.xml'
2024-04-19T11:48:14,467   adding 'moleculekit/share/pdb2pqr/residues/LME.dat'
2024-04-19T11:48:14,469   adding 'moleculekit/share/pdb2pqr/residues/LME.xml'
2024-04-19T11:48:14,470   adding 'moleculekit/share/pdb2pqr/residues/LMQ.dat'
2024-04-19T11:48:14,471   adding 'moleculekit/share/pdb2pqr/residues/LMQ.xml'
2024-04-19T11:48:14,472   adding 'moleculekit/share/pdb2pqr/residues/LYZ.dat'
2024-04-19T11:48:14,474   adding 'moleculekit/share/pdb2pqr/residues/LYZ.xml'
2024-04-19T11:48:14,475   adding 'moleculekit/share/pdb2pqr/residues/M3L.dat'
2024-04-19T11:48:14,476   adding 'moleculekit/share/pdb2pqr/residues/M3L.xml'
2024-04-19T11:48:14,478   adding 'moleculekit/share/pdb2pqr/residues/ME0.dat'
2024-04-19T11:48:14,479   adding 'moleculekit/share/pdb2pqr/residues/ME0.xml'
2024-04-19T11:48:14,480   adding 'moleculekit/share/pdb2pqr/residues/MEA.dat'
2024-04-19T11:48:14,481   adding 'moleculekit/share/pdb2pqr/residues/MEA.xml'
2024-04-19T11:48:14,482   adding 'moleculekit/share/pdb2pqr/residues/MEN.dat'
2024-04-19T11:48:14,484   adding 'moleculekit/share/pdb2pqr/residues/MEN.xml'
2024-04-19T11:48:14,485   adding 'moleculekit/share/pdb2pqr/residues/MEQ.dat'
2024-04-19T11:48:14,486   adding 'moleculekit/share/pdb2pqr/residues/MEQ.xml'
2024-04-19T11:48:14,487   adding 'moleculekit/share/pdb2pqr/residues/MLE.dat'
2024-04-19T11:48:14,488   adding 'moleculekit/share/pdb2pqr/residues/MLE.xml'
2024-04-19T11:48:14,489   adding 'moleculekit/share/pdb2pqr/residues/MLY.dat'
2024-04-19T11:48:14,491   adding 'moleculekit/share/pdb2pqr/residues/MLY.xml'
2024-04-19T11:48:14,492   adding 'moleculekit/share/pdb2pqr/residues/MLZ.dat'
2024-04-19T11:48:14,493   adding 'moleculekit/share/pdb2pqr/residues/MLZ.xml'
2024-04-19T11:48:14,494   adding 'moleculekit/share/pdb2pqr/residues/MME.dat'
2024-04-19T11:48:14,495   adding 'moleculekit/share/pdb2pqr/residues/MME.xml'
2024-04-19T11:48:14,496   adding 'moleculekit/share/pdb2pqr/residues/MMO.dat'
2024-04-19T11:48:14,497   adding 'moleculekit/share/pdb2pqr/residues/MMO.xml'
2024-04-19T11:48:14,499   adding 'moleculekit/share/pdb2pqr/residues/MVA.dat'
2024-04-19T11:48:14,500   adding 'moleculekit/share/pdb2pqr/residues/MVA.xml'
2024-04-19T11:48:14,501   adding 'moleculekit/share/pdb2pqr/residues/NAL.dat'
2024-04-19T11:48:14,502   adding 'moleculekit/share/pdb2pqr/residues/NAL.xml'
2024-04-19T11:48:14,503   adding 'moleculekit/share/pdb2pqr/residues/NCY.dat'
2024-04-19T11:48:14,505   adding 'moleculekit/share/pdb2pqr/residues/NCY.xml'
2024-04-19T11:48:14,506   adding 'moleculekit/share/pdb2pqr/residues/NLE.dat'
2024-04-19T11:48:14,507   adding 'moleculekit/share/pdb2pqr/residues/NLE.xml'
2024-04-19T11:48:14,508   adding 'moleculekit/share/pdb2pqr/residues/NVA.dat'
2024-04-19T11:48:14,509   adding 'moleculekit/share/pdb2pqr/residues/NVA.xml'
2024-04-19T11:48:14,511   adding 'moleculekit/share/pdb2pqr/residues/NZC.dat'
2024-04-19T11:48:14,512   adding 'moleculekit/share/pdb2pqr/residues/NZC.xml'
2024-04-19T11:48:14,513   adding 'moleculekit/share/pdb2pqr/residues/OCY.dat'
2024-04-19T11:48:14,514   adding 'moleculekit/share/pdb2pqr/residues/OCY.xml'
2024-04-19T11:48:14,515   adding 'moleculekit/share/pdb2pqr/residues/OMX.dat'
2024-04-19T11:48:14,517   adding 'moleculekit/share/pdb2pqr/residues/OMX.xml'
2024-04-19T11:48:14,518   adding 'moleculekit/share/pdb2pqr/residues/ONL.dat'
2024-04-19T11:48:14,519   adding 'moleculekit/share/pdb2pqr/residues/ONL.xml'
2024-04-19T11:48:14,520   adding 'moleculekit/share/pdb2pqr/residues/ORM.dat'
2024-04-19T11:48:14,521   adding 'moleculekit/share/pdb2pqr/residues/ORM.xml'
2024-04-19T11:48:14,523   adding 'moleculekit/share/pdb2pqr/residues/P1L.dat'
2024-04-19T11:48:14,524   adding 'moleculekit/share/pdb2pqr/residues/P1L.xml'
2024-04-19T11:48:14,525   adding 'moleculekit/share/pdb2pqr/residues/PCA.dat'
2024-04-19T11:48:14,526   adding 'moleculekit/share/pdb2pqr/residues/PCA.xml'
2024-04-19T11:48:14,528   adding 'moleculekit/share/pdb2pqr/residues/PRK.dat'
2024-04-19T11:48:14,529   adding 'moleculekit/share/pdb2pqr/residues/PRK.xml'
2024-04-19T11:48:14,530   adding 'moleculekit/share/pdb2pqr/residues/PTR.dat'
2024-04-19T11:48:14,531   adding 'moleculekit/share/pdb2pqr/residues/PTR.xml'
2024-04-19T11:48:14,533   adding 'moleculekit/share/pdb2pqr/residues/SEP.dat'
2024-04-19T11:48:14,534   adding 'moleculekit/share/pdb2pqr/residues/SEP.xml'
2024-04-19T11:48:14,535   adding 'moleculekit/share/pdb2pqr/residues/TPO.dat'
2024-04-19T11:48:14,536   adding 'moleculekit/share/pdb2pqr/residues/TPO.xml'
2024-04-19T11:48:14,537   adding 'moleculekit/share/pdb2pqr/residues/TRO.dat'
2024-04-19T11:48:14,539   adding 'moleculekit/share/pdb2pqr/residues/TRO.xml'
2024-04-19T11:48:14,540   adding 'moleculekit/share/pdb2pqr/residues/TY2.dat'
2024-04-19T11:48:14,542   adding 'moleculekit/share/pdb2pqr/residues/TY2.xml'
2024-04-19T11:48:14,543   adding 'moleculekit/share/pdb2pqr/residues/TYQ.dat'
2024-04-19T11:48:14,544   adding 'moleculekit/share/pdb2pqr/residues/TYQ.xml'
2024-04-19T11:48:14,545   adding 'moleculekit/share/pdb2pqr/residues/YCM.dat'
2024-04-19T11:48:14,546   adding 'moleculekit/share/pdb2pqr/residues/YCM.xml'
2024-04-19T11:48:14,548   adding 'moleculekit/share/pdb2pqr/residues/YNM.dat'
2024-04-19T11:48:14,549   adding 'moleculekit/share/pdb2pqr/residues/YNM.xml'
2024-04-19T11:48:14,551   adding 'moleculekit/smallmol/__init__.py'
2024-04-19T11:48:14,556   adding 'moleculekit/smallmol/smallmol.py'
2024-04-19T11:48:14,558   adding 'moleculekit/smallmol/smallmolcdp.py'
2024-04-19T11:48:14,560   adding 'moleculekit/smallmol/smallmollib.py'
2024-04-19T11:48:14,562   adding 'moleculekit/smallmol/test_smallmol.py'
2024-04-19T11:48:14,563   adding 'moleculekit/smallmol/test_smallmollib.py'
2024-04-19T11:48:14,565   adding 'moleculekit/smallmol/util.py'
2024-04-19T11:48:14,566   adding 'moleculekit/smallmol/tools/__init__.py'
2024-04-19T11:48:14,568   adding 'moleculekit/smallmol/tools/clustering.py'
2024-04-19T11:48:14,570   adding 'moleculekit/smallmol/tools/restrainedembed.py'
2024-04-19T11:48:14,571   adding 'moleculekit/smallmol/tools/test_tools.py'
2024-04-19T11:48:14,665   adding 'moleculekit/tmalign/tmalign_util.cpp'
2024-04-19T11:48:14,676   adding 'moleculekit/tmalign/tmalign_util.pyx'
2024-04-19T11:48:14,677   adding 'moleculekit/tmalign/tmalignlib.pxd'
2024-04-19T11:48:14,679   adding 'moleculekit/tmalign/include/TMAlign.h'
2024-04-19T11:48:14,696   adding 'moleculekit/tmalign/src/TMAlign.cpp'
2024-04-19T11:48:14,699   adding 'moleculekit/tools/__init__.py'
2024-04-19T11:48:14,701   adding 'moleculekit/tools/atomtyper.py'
2024-04-19T11:48:14,703   adding 'moleculekit/tools/autosegment.py'
2024-04-19T11:48:14,705   adding 'moleculekit/tools/crystalpacking.py'
2024-04-19T11:48:14,708   adding 'moleculekit/tools/detect.py'
2024-04-19T11:48:14,710   adding 'moleculekit/tools/docking.py'
2024-04-19T11:48:14,712   adding 'moleculekit/tools/graphalignment.py'
2024-04-19T11:48:14,714   adding 'moleculekit/tools/hhblitsprofile.py'
2024-04-19T11:48:14,715   adding 'moleculekit/tools/modelling.py'
2024-04-19T11:48:14,717   adding 'moleculekit/tools/moleculechecks.py'
2024-04-19T11:48:14,723   adding 'moleculekit/tools/preparation.py'
2024-04-19T11:48:14,725   adding 'moleculekit/tools/preparation_customres.py'
2024-04-19T11:48:14,727   adding 'moleculekit/tools/sequencestructuralalignment.py'
2024-04-19T11:48:14,730   adding 'moleculekit/tools/voxeldescriptors.py'
2024-04-19T11:48:14,732   adding 'moleculekit/tools/obabel_tools/__init__.py'
2024-04-19T11:48:14,733   adding 'moleculekit/tools/obabel_tools/obabel_cli.py'
2024-04-19T11:48:14,824   adding 'moleculekit/wrapping/wrapping.cpp'
2024-04-19T11:48:14,833   adding 'moleculekit/wrapping/wrapping.pyx'
2024-04-19T11:48:14,835   adding 'moleculekit-1.8.31.dist-info/LICENSE'
2024-04-19T11:48:14,837   adding 'moleculekit-1.8.31.dist-info/METADATA'
2024-04-19T11:48:14,838   adding 'moleculekit-1.8.31.dist-info/WHEEL'
2024-04-19T11:48:14,839   adding 'moleculekit-1.8.31.dist-info/top_level.txt'
2024-04-19T11:48:14,844   adding 'moleculekit-1.8.31.dist-info/RECORD'
2024-04-19T11:48:14,996   removing build/bdist.linux-armv7l/wheel
2024-04-19T11:48:15,303   Building wheel for moleculekit (pyproject.toml): finished with status 'done'
2024-04-19T11:48:15,647   Created wheel for moleculekit: filename=moleculekit-1.8.31-cp311-cp311-linux_armv7l.whl size=15274257 sha256=218f8197ef61b4d204fdf063e6c7161b0c1cada6b9072a80ed32467b83651997
2024-04-19T11:48:15,648   Stored in directory: /tmp/pip-ephem-wheel-cache-lb1amqou/wheels/0f/ea/2a/fb0ecc60be609e69237a64cfaf40dbb5de40f3b61aa96f28ca
2024-04-19T11:48:15,674 Successfully built moleculekit
2024-04-19T11:48:16,033 Removed build tracker: '/tmp/pip-build-tracker-d5655o44'