2024-04-21T18:42:26,350 Created temporary directory: /tmp/pip-build-tracker-_hf7kxzk
2024-04-21T18:42:26,351 Initialized build tracking at /tmp/pip-build-tracker-_hf7kxzk
2024-04-21T18:42:26,352 Created build tracker: /tmp/pip-build-tracker-_hf7kxzk
2024-04-21T18:42:26,352 Entered build tracker: /tmp/pip-build-tracker-_hf7kxzk
2024-04-21T18:42:26,353 Created temporary directory: /tmp/pip-wheel-lurs_vxf
2024-04-21T18:42:26,356 Created temporary directory: /tmp/pip-ephem-wheel-cache-s626rnk7
2024-04-21T18:42:26,381 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-04-21T18:42:26,385 2 location(s) to search for versions of mddtoolkit:
2024-04-21T18:42:26,385 * https://pypi.org/simple/mddtoolkit/
2024-04-21T18:42:26,385 * https://www.piwheels.org/simple/mddtoolkit/
2024-04-21T18:42:26,386 Fetching project page and analyzing links: https://pypi.org/simple/mddtoolkit/
2024-04-21T18:42:26,386 Getting page https://pypi.org/simple/mddtoolkit/
2024-04-21T18:42:26,388 Found index url https://pypi.org/simple/
2024-04-21T18:42:26,599 Fetched page https://pypi.org/simple/mddtoolkit/ as application/vnd.pypi.simple.v1+json
2024-04-21T18:42:26,601   Skipping link: No binaries permitted for mddtoolkit: https://files.pythonhosted.org/packages/de/36/2d2deb556fef208190efd07de1d1d132d077ed1b4e4d98ce12c82e00f5a0/mddtoolkit-0.2.0-py3-none-any.whl (from https://pypi.org/simple/mddtoolkit/) (requires-python:>=3.9)
2024-04-21T18:42:26,602   Found link https://files.pythonhosted.org/packages/d8/2f/86ce1747cfbe633e9a702c4791b55084f4297dc2088b4b7eaa661e3c4831/mddtoolkit-0.2.0.tar.gz (from https://pypi.org/simple/mddtoolkit/) (requires-python:>=3.9), version: 0.2.0
2024-04-21T18:42:26,603   Skipping link: No binaries permitted for mddtoolkit: https://files.pythonhosted.org/packages/78/2a/52a27e0ae1756d65f7fc1ef0adf59f459bf71ac69fab39a3ef265397eb9d/mddtoolkit-0.3.0-py3-none-any.whl (from https://pypi.org/simple/mddtoolkit/) (requires-python:>=3.9)
2024-04-21T18:42:26,604   Found link https://files.pythonhosted.org/packages/b4/8f/477cc9a3e7ca95c915aa8b47d8ef13cdcef407d6a5c740c0ed9db3779c5b/mddtoolkit-0.3.0.tar.gz (from https://pypi.org/simple/mddtoolkit/) (requires-python:>=3.9), version: 0.3.0
2024-04-21T18:42:26,605 Fetching project page and analyzing links: https://www.piwheels.org/simple/mddtoolkit/
2024-04-21T18:42:26,605 Getting page https://www.piwheels.org/simple/mddtoolkit/
2024-04-21T18:42:26,607 Found index url https://www.piwheels.org/simple/
2024-04-21T18:42:26,798 Fetched page https://www.piwheels.org/simple/mddtoolkit/ as text/html
2024-04-21T18:42:26,832   Skipping link: No binaries permitted for mddtoolkit: https://www.piwheels.org/simple/mddtoolkit/mddtoolkit-0.2.0-py3-none-any.whl#sha256=9c531691318200ce1c3fbaff2ca1cbe70683c2ced4c1a19b447377745fd3b18e (from https://www.piwheels.org/simple/mddtoolkit/) (requires-python:>=3.9)
2024-04-21T18:42:26,833 Skipping link: not a file: https://www.piwheels.org/simple/mddtoolkit/
2024-04-21T18:42:26,834 Skipping link: not a file: https://pypi.org/simple/mddtoolkit/
2024-04-21T18:42:26,852 Given no hashes to check 1 links for project 'mddtoolkit': discarding no candidates
2024-04-21T18:42:26,869 Collecting mddtoolkit==0.3.0
2024-04-21T18:42:26,872   Created temporary directory: /tmp/pip-unpack-j6wogkgm
2024-04-21T18:42:27,080   Downloading mddtoolkit-0.3.0.tar.gz (30 kB)
2024-04-21T18:42:27,177   Added mddtoolkit==0.3.0 from https://files.pythonhosted.org/packages/b4/8f/477cc9a3e7ca95c915aa8b47d8ef13cdcef407d6a5c740c0ed9db3779c5b/mddtoolkit-0.3.0.tar.gz to build tracker '/tmp/pip-build-tracker-_hf7kxzk'
2024-04-21T18:42:27,180   Created temporary directory: /tmp/pip-build-env-avjbbcyq
2024-04-21T18:42:27,185   Installing build dependencies: started
2024-04-21T18:42:27,186   Running command pip subprocess to install build dependencies
2024-04-21T18:42:28,383   Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2024-04-21T18:42:28,927   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-04-21T18:42:30,551   Collecting setuptools
2024-04-21T18:42:30,566     Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.5.1-py3-none-any.whl (894 kB)
2024-04-21T18:42:33,246   Installing collected packages: setuptools
2024-04-21T18:42:36,295   Successfully installed setuptools-69.5.1
2024-04-21T18:42:36,861   Installing build dependencies: finished with status 'done'
2024-04-21T18:42:36,864   Getting requirements to build wheel: started
2024-04-21T18:42:36,865   Running command Getting requirements to build wheel
2024-04-21T18:42:37,912   running egg_info
2024-04-21T18:42:37,915   writing src/mddtoolkit.egg-info/PKG-INFO
2024-04-21T18:42:37,919   writing dependency_links to src/mddtoolkit.egg-info/dependency_links.txt
2024-04-21T18:42:37,922   writing entry points to src/mddtoolkit.egg-info/entry_points.txt
2024-04-21T18:42:37,924   writing requirements to src/mddtoolkit.egg-info/requires.txt
2024-04-21T18:42:37,926   writing top-level names to src/mddtoolkit.egg-info/top_level.txt
2024-04-21T18:42:37,947   reading manifest file 'src/mddtoolkit.egg-info/SOURCES.txt'
2024-04-21T18:42:37,952   writing manifest file 'src/mddtoolkit.egg-info/SOURCES.txt'
2024-04-21T18:42:38,066   Getting requirements to build wheel: finished with status 'done'
2024-04-21T18:42:38,075   Installing backend dependencies: started
2024-04-21T18:42:38,077   Running command pip subprocess to install backend dependencies
2024-04-21T18:42:39,482   Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11)
2024-04-21T18:42:40,031   Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-04-21T18:42:40,730   Collecting wheel
2024-04-21T18:42:40,763     Using cached https://www.piwheels.org/simple/wheel/wheel-0.43.0-py3-none-any.whl (65 kB)
2024-04-21T18:42:43,277   Installing collected packages: wheel
2024-04-21T18:42:43,527     Creating /tmp/pip-build-env-avjbbcyq/normal/local/bin
2024-04-21T18:42:43,530     changing mode of /tmp/pip-build-env-avjbbcyq/normal/local/bin/wheel to 755
2024-04-21T18:42:43,544   Successfully installed wheel-0.43.0
2024-04-21T18:42:44,076   Installing backend dependencies: finished with status 'done'
2024-04-21T18:42:44,078   Created temporary directory: /tmp/pip-modern-metadata-m8helk89
2024-04-21T18:42:44,081   Preparing metadata (pyproject.toml): started
2024-04-21T18:42:44,082   Running command Preparing metadata (pyproject.toml)
2024-04-21T18:42:44,933   running dist_info
2024-04-21T18:42:44,938   creating /tmp/pip-modern-metadata-m8helk89/mddtoolkit.egg-info
2024-04-21T18:42:44,942   writing /tmp/pip-modern-metadata-m8helk89/mddtoolkit.egg-info/PKG-INFO
2024-04-21T18:42:44,946   writing dependency_links to /tmp/pip-modern-metadata-m8helk89/mddtoolkit.egg-info/dependency_links.txt
2024-04-21T18:42:44,948   writing entry points to /tmp/pip-modern-metadata-m8helk89/mddtoolkit.egg-info/entry_points.txt
2024-04-21T18:42:44,949   writing requirements to /tmp/pip-modern-metadata-m8helk89/mddtoolkit.egg-info/requires.txt
2024-04-21T18:42:44,951   writing top-level names to /tmp/pip-modern-metadata-m8helk89/mddtoolkit.egg-info/top_level.txt
2024-04-21T18:42:44,952   writing manifest file '/tmp/pip-modern-metadata-m8helk89/mddtoolkit.egg-info/SOURCES.txt'
2024-04-21T18:42:44,971   reading manifest file '/tmp/pip-modern-metadata-m8helk89/mddtoolkit.egg-info/SOURCES.txt'
2024-04-21T18:42:44,976   writing manifest file '/tmp/pip-modern-metadata-m8helk89/mddtoolkit.egg-info/SOURCES.txt'
2024-04-21T18:42:44,977   creating '/tmp/pip-modern-metadata-m8helk89/mddtoolkit-0.3.0.dist-info'
2024-04-21T18:42:45,133   Preparing metadata (pyproject.toml): finished with status 'done'
2024-04-21T18:42:45,139   Source in /tmp/pip-wheel-lurs_vxf/mddtoolkit_834cd6156b7140edaf00e611ccc14efb has version 0.3.0, which satisfies requirement mddtoolkit==0.3.0 from https://files.pythonhosted.org/packages/b4/8f/477cc9a3e7ca95c915aa8b47d8ef13cdcef407d6a5c740c0ed9db3779c5b/mddtoolkit-0.3.0.tar.gz
2024-04-21T18:42:45,140   Removed mddtoolkit==0.3.0 from https://files.pythonhosted.org/packages/b4/8f/477cc9a3e7ca95c915aa8b47d8ef13cdcef407d6a5c740c0ed9db3779c5b/mddtoolkit-0.3.0.tar.gz from build tracker '/tmp/pip-build-tracker-_hf7kxzk'
2024-04-21T18:42:45,146 Created temporary directory: /tmp/pip-unpack-jxyay8kx
2024-04-21T18:42:45,147 Created temporary directory: /tmp/pip-unpack-ue0_4m78
2024-04-21T18:42:45,157 Building wheels for collected packages: mddtoolkit
2024-04-21T18:42:45,162   Created temporary directory: /tmp/pip-wheel-uh4_6d28
2024-04-21T18:42:45,162   Destination directory: /tmp/pip-wheel-uh4_6d28
2024-04-21T18:42:45,164   Building wheel for mddtoolkit (pyproject.toml): started
2024-04-21T18:42:45,165   Running command Building wheel for mddtoolkit (pyproject.toml)
2024-04-21T18:42:45,933   running bdist_wheel
2024-04-21T18:42:45,949   running build
2024-04-21T18:42:45,950   running build_py
2024-04-21T18:42:45,954   creating build
2024-04-21T18:42:45,955   creating build/lib
2024-04-21T18:42:45,956   creating build/lib/diffusion_kinetics
2024-04-21T18:42:45,957   copying src/diffusion_kinetics/cli.py -> build/lib/diffusion_kinetics
2024-04-21T18:42:45,960   creating build/lib/diffusion_kinetics/pipeline
2024-04-21T18:42:45,961   copying src/diffusion_kinetics/pipeline/multi_pipeline.py -> build/lib/diffusion_kinetics/pipeline
2024-04-21T18:42:45,964   copying src/diffusion_kinetics/pipeline/__init__.py -> build/lib/diffusion_kinetics/pipeline
2024-04-21T18:42:45,965   copying src/diffusion_kinetics/pipeline/pipeline_config.py -> build/lib/diffusion_kinetics/pipeline
2024-04-21T18:42:45,968   copying src/diffusion_kinetics/pipeline/base_pipeline.py -> build/lib/diffusion_kinetics/pipeline
2024-04-21T18:42:45,970   copying src/diffusion_kinetics/pipeline/pipeline_output.py -> build/lib/diffusion_kinetics/pipeline
2024-04-21T18:42:45,971   copying src/diffusion_kinetics/pipeline/single_pipeline.py -> build/lib/diffusion_kinetics/pipeline
2024-04-21T18:42:45,974   creating build/lib/diffusion_kinetics/preprocessing
2024-04-21T18:42:45,975   copying src/diffusion_kinetics/preprocessing/calculate_experimental_results.py -> build/lib/diffusion_kinetics/preprocessing
2024-04-21T18:42:45,977   copying src/diffusion_kinetics/preprocessing/generate_inputs.py -> build/lib/diffusion_kinetics/preprocessing
2024-04-21T18:42:45,980   creating build/lib/diffusion_kinetics/utils
2024-04-21T18:42:45,981   copying src/diffusion_kinetics/utils/plot_results.py -> build/lib/diffusion_kinetics/utils
2024-04-21T18:42:45,984   copying src/diffusion_kinetics/utils/organize_x.py -> build/lib/diffusion_kinetics/utils
2024-04-21T18:42:45,986   copying src/diffusion_kinetics/utils/kinetics_dataframe.py -> build/lib/diffusion_kinetics/utils
2024-04-21T18:42:45,988   creating build/lib/diffusion_kinetics/optimization
2024-04-21T18:42:45,989   copying src/diffusion_kinetics/optimization/__init__.py -> build/lib/diffusion_kinetics/optimization
2024-04-21T18:42:45,991   copying src/diffusion_kinetics/optimization/diffusion_objective.py -> build/lib/diffusion_kinetics/optimization
2024-04-21T18:42:45,994   copying src/diffusion_kinetics/optimization/dataset.py -> build/lib/diffusion_kinetics/optimization
2024-04-21T18:42:45,996   copying src/diffusion_kinetics/optimization/diffusion_optimizer.py -> build/lib/diffusion_kinetics/optimization
2024-04-21T18:42:45,998   copying src/diffusion_kinetics/optimization/forward_model_kinetics.py -> build/lib/diffusion_kinetics/optimization
2024-04-21T18:42:46,001   copying src/diffusion_kinetics/optimization/conHe_Param.py -> build/lib/diffusion_kinetics/optimization
2024-04-21T18:42:46,002   running egg_info
2024-04-21T18:42:46,006   writing src/mddtoolkit.egg-info/PKG-INFO
2024-04-21T18:42:46,010   writing dependency_links to src/mddtoolkit.egg-info/dependency_links.txt
2024-04-21T18:42:46,012   writing entry points to src/mddtoolkit.egg-info/entry_points.txt
2024-04-21T18:42:46,013   writing requirements to src/mddtoolkit.egg-info/requires.txt
2024-04-21T18:42:46,014   writing top-level names to src/mddtoolkit.egg-info/top_level.txt
2024-04-21T18:42:46,026   reading manifest file 'src/mddtoolkit.egg-info/SOURCES.txt'
2024-04-21T18:42:46,031   writing manifest file 'src/mddtoolkit.egg-info/SOURCES.txt'
2024-04-21T18:42:46,044   installing to build/bdist.linux-armv7l/wheel
2024-04-21T18:42:46,045   running install
2024-04-21T18:42:46,069   running install_lib
2024-04-21T18:42:46,074   creating build/bdist.linux-armv7l
2024-04-21T18:42:46,074   creating build/bdist.linux-armv7l/wheel
2024-04-21T18:42:46,076   creating build/bdist.linux-armv7l/wheel/diffusion_kinetics
2024-04-21T18:42:46,078   creating build/bdist.linux-armv7l/wheel/diffusion_kinetics/pipeline
2024-04-21T18:42:46,079   copying build/lib/diffusion_kinetics/pipeline/multi_pipeline.py -> build/bdist.linux-armv7l/wheel/diffusion_kinetics/pipeline
2024-04-21T18:42:46,082   copying build/lib/diffusion_kinetics/pipeline/__init__.py -> build/bdist.linux-armv7l/wheel/diffusion_kinetics/pipeline
2024-04-21T18:42:46,085   copying build/lib/diffusion_kinetics/pipeline/pipeline_config.py -> build/bdist.linux-armv7l/wheel/diffusion_kinetics/pipeline
2024-04-21T18:42:46,087   copying build/lib/diffusion_kinetics/pipeline/base_pipeline.py -> build/bdist.linux-armv7l/wheel/diffusion_kinetics/pipeline
2024-04-21T18:42:46,090   copying build/lib/diffusion_kinetics/pipeline/pipeline_output.py -> build/bdist.linux-armv7l/wheel/diffusion_kinetics/pipeline
2024-04-21T18:42:46,092   copying build/lib/diffusion_kinetics/pipeline/single_pipeline.py -> build/bdist.linux-armv7l/wheel/diffusion_kinetics/pipeline
2024-04-21T18:42:46,095   creating build/bdist.linux-armv7l/wheel/diffusion_kinetics/preprocessing
2024-04-21T18:42:46,096   copying build/lib/diffusion_kinetics/preprocessing/calculate_experimental_results.py -> build/bdist.linux-armv7l/wheel/diffusion_kinetics/preprocessing
2024-04-21T18:42:46,098   copying build/lib/diffusion_kinetics/preprocessing/generate_inputs.py -> build/bdist.linux-armv7l/wheel/diffusion_kinetics/preprocessing
2024-04-21T18:42:46,101   creating build/bdist.linux-armv7l/wheel/diffusion_kinetics/utils
2024-04-21T18:42:46,102   copying build/lib/diffusion_kinetics/utils/plot_results.py -> build/bdist.linux-armv7l/wheel/diffusion_kinetics/utils
2024-04-21T18:42:46,105   copying build/lib/diffusion_kinetics/utils/organize_x.py -> build/bdist.linux-armv7l/wheel/diffusion_kinetics/utils
2024-04-21T18:42:46,107   copying build/lib/diffusion_kinetics/utils/kinetics_dataframe.py -> build/bdist.linux-armv7l/wheel/diffusion_kinetics/utils
2024-04-21T18:42:46,110   creating build/bdist.linux-armv7l/wheel/diffusion_kinetics/optimization
2024-04-21T18:42:46,111   copying build/lib/diffusion_kinetics/optimization/__init__.py -> build/bdist.linux-armv7l/wheel/diffusion_kinetics/optimization
2024-04-21T18:42:46,114   copying build/lib/diffusion_kinetics/optimization/diffusion_objective.py -> build/bdist.linux-armv7l/wheel/diffusion_kinetics/optimization
2024-04-21T18:42:46,117   copying build/lib/diffusion_kinetics/optimization/dataset.py -> build/bdist.linux-armv7l/wheel/diffusion_kinetics/optimization
2024-04-21T18:42:46,119   copying build/lib/diffusion_kinetics/optimization/diffusion_optimizer.py -> build/bdist.linux-armv7l/wheel/diffusion_kinetics/optimization
2024-04-21T18:42:46,121   copying build/lib/diffusion_kinetics/optimization/forward_model_kinetics.py -> build/bdist.linux-armv7l/wheel/diffusion_kinetics/optimization
2024-04-21T18:42:46,124   copying build/lib/diffusion_kinetics/optimization/conHe_Param.py -> build/bdist.linux-armv7l/wheel/diffusion_kinetics/optimization
2024-04-21T18:42:46,126   copying build/lib/diffusion_kinetics/cli.py -> build/bdist.linux-armv7l/wheel/diffusion_kinetics
2024-04-21T18:42:46,127   running install_egg_info
2024-04-21T18:42:46,131   Copying src/mddtoolkit.egg-info to build/bdist.linux-armv7l/wheel/mddtoolkit-0.3.0-py3.11.egg-info
2024-04-21T18:42:46,143   running install_scripts
2024-04-21T18:42:46,160   creating build/bdist.linux-armv7l/wheel/mddtoolkit-0.3.0.dist-info/WHEEL
2024-04-21T18:42:46,163   creating '/tmp/pip-wheel-uh4_6d28/.tmp-1lnhcivv/mddtoolkit-0.3.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-04-21T18:42:46,165   adding 'diffusion_kinetics/cli.py'
2024-04-21T18:42:46,168   adding 'diffusion_kinetics/optimization/__init__.py'
2024-04-21T18:42:46,169   adding 'diffusion_kinetics/optimization/conHe_Param.py'
2024-04-21T18:42:46,170   adding 'diffusion_kinetics/optimization/dataset.py'
2024-04-21T18:42:46,172   adding 'diffusion_kinetics/optimization/diffusion_objective.py'
2024-04-21T18:42:46,174   adding 'diffusion_kinetics/optimization/diffusion_optimizer.py'
2024-04-21T18:42:46,175   adding 'diffusion_kinetics/optimization/forward_model_kinetics.py'
2024-04-21T18:42:46,177   adding 'diffusion_kinetics/pipeline/__init__.py'
2024-04-21T18:42:46,178   adding 'diffusion_kinetics/pipeline/base_pipeline.py'
2024-04-21T18:42:46,180   adding 'diffusion_kinetics/pipeline/multi_pipeline.py'
2024-04-21T18:42:46,182   adding 'diffusion_kinetics/pipeline/pipeline_config.py'
2024-04-21T18:42:46,183   adding 'diffusion_kinetics/pipeline/pipeline_output.py'
2024-04-21T18:42:46,185   adding 'diffusion_kinetics/pipeline/single_pipeline.py'
2024-04-21T18:42:46,187   adding 'diffusion_kinetics/preprocessing/calculate_experimental_results.py'
2024-04-21T18:42:46,188   adding 'diffusion_kinetics/preprocessing/generate_inputs.py'
2024-04-21T18:42:46,190   adding 'diffusion_kinetics/utils/kinetics_dataframe.py'
2024-04-21T18:42:46,191   adding 'diffusion_kinetics/utils/organize_x.py'
2024-04-21T18:42:46,193   adding 'diffusion_kinetics/utils/plot_results.py'
2024-04-21T18:42:46,196   adding 'mddtoolkit-0.3.0.dist-info/METADATA'
2024-04-21T18:42:46,197   adding 'mddtoolkit-0.3.0.dist-info/WHEEL'
2024-04-21T18:42:46,198   adding 'mddtoolkit-0.3.0.dist-info/entry_points.txt'
2024-04-21T18:42:46,199   adding 'mddtoolkit-0.3.0.dist-info/top_level.txt'
2024-04-21T18:42:46,201   adding 'mddtoolkit-0.3.0.dist-info/RECORD'
2024-04-21T18:42:46,203   removing build/bdist.linux-armv7l/wheel
2024-04-21T18:42:46,332   Building wheel for mddtoolkit (pyproject.toml): finished with status 'done'
2024-04-21T18:42:46,337   Created wheel for mddtoolkit: filename=mddtoolkit-0.3.0-py3-none-any.whl size=31139 sha256=00cfcc8a8801043dfeb93c3337a4f2fcb09852c1ed142ea28c8935a2dd7a5d3a
2024-04-21T18:42:46,338   Stored in directory: /tmp/pip-ephem-wheel-cache-s626rnk7/wheels/32/75/21/4a209839272bae559ac480fe7b3ea0502a4dd35f8c86a89c2f
2024-04-21T18:42:46,350 Successfully built mddtoolkit
2024-04-21T18:42:46,356 Removed build tracker: '/tmp/pip-build-tracker-_hf7kxzk'