2024-04-23T22:39:54,657 Created temporary directory: /tmp/pip-build-tracker-zaxztdx8 2024-04-23T22:39:54,658 Initialized build tracking at /tmp/pip-build-tracker-zaxztdx8 2024-04-23T22:39:54,659 Created build tracker: /tmp/pip-build-tracker-zaxztdx8 2024-04-23T22:39:54,659 Entered build tracker: /tmp/pip-build-tracker-zaxztdx8 2024-04-23T22:39:54,659 Created temporary directory: /tmp/pip-wheel-wgdj5l0x 2024-04-23T22:39:54,663 Created temporary directory: /tmp/pip-ephem-wheel-cache-xsn6o8nt 2024-04-23T22:39:54,691 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-04-23T22:39:54,694 2 location(s) to search for versions of scilpy: 2024-04-23T22:39:54,694 * https://pypi.org/simple/scilpy/ 2024-04-23T22:39:54,694 * https://www.piwheels.org/simple/scilpy/ 2024-04-23T22:39:54,695 Fetching project page and analyzing links: https://pypi.org/simple/scilpy/ 2024-04-23T22:39:54,696 Getting page https://pypi.org/simple/scilpy/ 2024-04-23T22:39:54,697 Found index url https://pypi.org/simple/ 2024-04-23T22:39:54,750 Fetched page https://pypi.org/simple/scilpy/ as application/vnd.pypi.simple.v1+json 2024-04-23T22:39:54,753 Found link https://files.pythonhosted.org/packages/fc/2a/50d559ef46fb2d42ab0f8fbf3da9b077d522cf242a284c950ba7508cf9d1/scilpy-0.2.dev0.tar.gz (from https://pypi.org/simple/scilpy/), version: 0.2.dev0 2024-04-23T22:39:54,753 Skipping link: No binaries permitted for scilpy: https://files.pythonhosted.org/packages/68/5b/160b7def3cfb0a5de995bc878895c1c51384b06b02cbe195711e2c55b7aa/scilpy-1.5.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/scilpy/) (requires-python:~=3.8,<3.11) 2024-04-23T22:39:54,754 Skipping link: No binaries permitted for scilpy: https://files.pythonhosted.org/packages/63/09/cf207e968fed291956d4c2fe748764d02dc42e98e67479e4be3f4f3d3b55/scilpy-1.5.0-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/scilpy/) (requires-python:~=3.8,<3.11) 2024-04-23T22:39:54,754 Skipping link: No binaries permitted for scilpy: https://files.pythonhosted.org/packages/5f/60/3c9ba56a83a8ca1b73fe658c48c51c0023214ef7ab294b07baab96b03578/scilpy-1.5.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/scilpy/) (requires-python:~=3.8,<3.11) 2024-04-23T22:39:54,755 Found link https://files.pythonhosted.org/packages/ed/c6/db658cf822392685ea33e78beebc2a98a4f4dc6f20795b830c5853e20a8f/scilpy-1.5.0.tar.gz (from https://pypi.org/simple/scilpy/) (requires-python:~=3.8,<3.11), version: 1.5.0 2024-04-23T22:39:54,755 Skipping link: No binaries permitted for scilpy: https://files.pythonhosted.org/packages/85/35/af43f0811237291f7515e3aabfd3a0c27b0e3a2a6737b8c583196602a595/scilpy-1.5.post2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/scilpy/) (requires-python:~=3.8,<3.11) 2024-04-23T22:39:54,755 Skipping link: No binaries permitted for scilpy: https://files.pythonhosted.org/packages/06/a6/cb1fe978af8bb5ba6e197c84bb88a1954975872b2b0b08c186b263ff3756/scilpy-1.5.post2-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/scilpy/) (requires-python:~=3.8,<3.11) 2024-04-23T22:39:54,755 Skipping link: No binaries permitted for scilpy: https://files.pythonhosted.org/packages/3a/86/62a9ad50dc407e1741089780533246771ffa72c8113368db26cbd33b0f1f/scilpy-1.5.post2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/scilpy/) (requires-python:~=3.8,<3.11) 2024-04-23T22:39:54,756 Found link https://files.pythonhosted.org/packages/63/cf/cd6532740cb57b56ac4d71529341641e736557bead414e1d9b40c7130d6f/scilpy-1.5.post2.tar.gz (from https://pypi.org/simple/scilpy/) (requires-python:~=3.8,<3.11), version: 1.5.post2 2024-04-23T22:39:54,757 Skipping link: No binaries permitted for scilpy: https://files.pythonhosted.org/packages/53/23/fe49f865e6c9dd7d435590787bcab9734129a2a45cf81dc54795de046251/scilpy-2.0.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/scilpy/) (requires-python:<3.11,>=3.9) 2024-04-23T22:39:54,757 Skipping link: No binaries permitted for scilpy: https://files.pythonhosted.org/packages/30/ae/c61db7f1a29b5d57a7448a9ab39503aceaf3286d2f5ff1d7191830317be1/scilpy-2.0.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (from https://pypi.org/simple/scilpy/) (requires-python:<3.11,>=3.9) 2024-04-23T22:39:54,757 Found link https://files.pythonhosted.org/packages/63/d9/27a2c31fb8d56499a234ecefb67baf3f7ffd5f9954b9e63f8391173956af/scilpy-2.0.0.tar.gz (from https://pypi.org/simple/scilpy/) (requires-python:<3.11,>=3.9), version: 2.0.0 2024-04-23T22:39:54,758 Fetching project page and analyzing links: https://www.piwheels.org/simple/scilpy/ 2024-04-23T22:39:54,758 Getting page https://www.piwheels.org/simple/scilpy/ 2024-04-23T22:39:54,759 Found index url https://www.piwheels.org/simple/ 2024-04-23T22:39:54,847 Fetched page https://www.piwheels.org/simple/scilpy/ as text/html 2024-04-23T22:39:54,850 Skipping link: No binaries permitted for scilpy: https://www.piwheels.org/simple/scilpy/scilpy-1.5.post2-cp39-cp39-linux_armv6l.whl#sha256=4c2fce848cd6aca1e6e175977de3a6669eea310d4848eab74f66a8ab69991acf (from https://www.piwheels.org/simple/scilpy/) (requires-python:~=3.8,<3.11) 2024-04-23T22:39:54,851 Skipping link: No binaries permitted for scilpy: https://www.piwheels.org/simple/scilpy/scilpy-1.5.post2-cp39-cp39-linux_armv7l.whl#sha256=4c2fce848cd6aca1e6e175977de3a6669eea310d4848eab74f66a8ab69991acf (from https://www.piwheels.org/simple/scilpy/) (requires-python:~=3.8,<3.11) 2024-04-23T22:39:54,851 Skipping link: No binaries permitted for scilpy: https://www.piwheels.org/simple/scilpy/scilpy-1.5.0-cp39-cp39-linux_armv6l.whl#sha256=7673d2adc10be42497d2fba658bc2c0064063e30ad1aa08b464920732b79dccd (from https://www.piwheels.org/simple/scilpy/) (requires-python:~=3.8,<3.11) 2024-04-23T22:39:54,851 Skipping link: No binaries permitted for scilpy: https://www.piwheels.org/simple/scilpy/scilpy-1.5.0-cp39-cp39-linux_armv7l.whl#sha256=7673d2adc10be42497d2fba658bc2c0064063e30ad1aa08b464920732b79dccd (from https://www.piwheels.org/simple/scilpy/) (requires-python:~=3.8,<3.11) 2024-04-23T22:39:54,851 Skipping link: No binaries permitted for scilpy: https://www.piwheels.org/simple/scilpy/scilpy-0.2.dev0-cp37-cp37m-linux_armv6l.whl#sha256=1fe2a44941abfb6397d0634d6699f74930df00a3b74154d5a3ec7c754ad6bcab (from https://www.piwheels.org/simple/scilpy/) 2024-04-23T22:39:54,852 Skipping link: No binaries permitted for scilpy: https://www.piwheels.org/simple/scilpy/scilpy-0.2.dev0-cp37-cp37m-linux_armv7l.whl#sha256=1fe2a44941abfb6397d0634d6699f74930df00a3b74154d5a3ec7c754ad6bcab (from https://www.piwheels.org/simple/scilpy/) 2024-04-23T22:39:54,852 Skipping link: No binaries permitted for scilpy: https://www.piwheels.org/simple/scilpy/scilpy-0.2.dev0-cp39-cp39-linux_armv6l.whl#sha256=4d60471b8bc262bab66213e2b42319310aa245a776f74de10d899520122d7320 (from https://www.piwheels.org/simple/scilpy/) 2024-04-23T22:39:54,852 Skipping link: No binaries permitted for scilpy: https://www.piwheels.org/simple/scilpy/scilpy-0.2.dev0-cp39-cp39-linux_armv7l.whl#sha256=4d60471b8bc262bab66213e2b42319310aa245a776f74de10d899520122d7320 (from https://www.piwheels.org/simple/scilpy/) 2024-04-23T22:39:54,852 Skipping link: not a file: https://www.piwheels.org/simple/scilpy/ 2024-04-23T22:39:54,852 Skipping link: not a file: https://pypi.org/simple/scilpy/ 2024-04-23T22:39:54,870 Given no hashes to check 1 links for project 'scilpy': discarding no candidates 2024-04-23T22:39:54,887 Collecting scilpy==2.0.0 2024-04-23T22:39:54,889 Created temporary directory: /tmp/pip-unpack-qhzp44k1 2024-04-23T22:39:55,021 Downloading scilpy-2.0.0.tar.gz (524 kB) 2024-04-23T22:39:56,379 Added scilpy==2.0.0 from https://files.pythonhosted.org/packages/63/d9/27a2c31fb8d56499a234ecefb67baf3f7ffd5f9954b9e63f8391173956af/scilpy-2.0.0.tar.gz to build tracker '/tmp/pip-build-tracker-zaxztdx8' 2024-04-23T22:39:56,381 Running setup.py (path:/tmp/pip-wheel-wgdj5l0x/scilpy_36250047719b4585af010ed9b5113934/setup.py) egg_info for package scilpy 2024-04-23T22:39:56,382 Created temporary directory: /tmp/pip-pip-egg-info-c5q3wsqm 2024-04-23T22:39:56,382 Preparing metadata (setup.py): started 2024-04-23T22:39:56,383 Running command python setup.py egg_info 2024-04-23T22:39:57,367 /usr/local/lib/python3.9/dist-packages/setuptools/__init__.py:80: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2024-04-23T22:39:57,367 !! 2024-04-23T22:39:57,367 ******************************************************************************** 2024-04-23T22:39:57,367 Requirements should be satisfied by a PEP 517 installer. 2024-04-23T22:39:57,368 If you are using pip, you can try `pip install --use-pep517`. 2024-04-23T22:39:57,368 ******************************************************************************** 2024-04-23T22:39:57,368 !! 2024-04-23T22:39:57,368 dist.fetch_build_eggs(dist.setup_requires) 2024-04-23T22:39:57,661 running egg_info 2024-04-23T22:39:57,662 creating /tmp/pip-pip-egg-info-c5q3wsqm/scilpy.egg-info 2024-04-23T22:39:57,698 writing /tmp/pip-pip-egg-info-c5q3wsqm/scilpy.egg-info/PKG-INFO 2024-04-23T22:39:57,702 writing dependency_links to /tmp/pip-pip-egg-info-c5q3wsqm/scilpy.egg-info/dependency_links.txt 2024-04-23T22:39:57,720 writing entry points to /tmp/pip-pip-egg-info-c5q3wsqm/scilpy.egg-info/entry_points.txt 2024-04-23T22:39:57,723 writing requirements to /tmp/pip-pip-egg-info-c5q3wsqm/scilpy.egg-info/requires.txt 2024-04-23T22:39:57,725 writing top-level names to /tmp/pip-pip-egg-info-c5q3wsqm/scilpy.egg-info/top_level.txt 2024-04-23T22:39:57,726 writing manifest file '/tmp/pip-pip-egg-info-c5q3wsqm/scilpy.egg-info/SOURCES.txt' 2024-04-23T22:39:57,999 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-04-23T22:39:58,008 reading manifest file '/tmp/pip-pip-egg-info-c5q3wsqm/scilpy.egg-info/SOURCES.txt' 2024-04-23T22:39:58,010 reading manifest template 'MANIFEST.in' 2024-04-23T22:39:58,055 warning: no files found matching '*.c' under directory 'scilpy' 2024-04-23T22:39:58,095 warning: no files found matching '*.cpp' under directory 'scilpy' 2024-04-23T22:39:58,137 adding license file 'LICENSE' 2024-04-23T22:39:58,160 writing manifest file '/tmp/pip-pip-egg-info-c5q3wsqm/scilpy.egg-info/SOURCES.txt' 2024-04-23T22:39:58,263 Preparing metadata (setup.py): finished with status 'done' 2024-04-23T22:39:58,269 Source in /tmp/pip-wheel-wgdj5l0x/scilpy_36250047719b4585af010ed9b5113934 has version 2.0.0, which satisfies requirement scilpy==2.0.0 from https://files.pythonhosted.org/packages/63/d9/27a2c31fb8d56499a234ecefb67baf3f7ffd5f9954b9e63f8391173956af/scilpy-2.0.0.tar.gz 2024-04-23T22:39:58,270 Removed scilpy==2.0.0 from https://files.pythonhosted.org/packages/63/d9/27a2c31fb8d56499a234ecefb67baf3f7ffd5f9954b9e63f8391173956af/scilpy-2.0.0.tar.gz from build tracker '/tmp/pip-build-tracker-zaxztdx8' 2024-04-23T22:39:58,277 Created temporary directory: /tmp/pip-unpack-1pwu2t9m 2024-04-23T22:39:58,278 Created temporary directory: /tmp/pip-unpack-kreymk94 2024-04-23T22:39:58,336 Building wheels for collected packages: scilpy 2024-04-23T22:39:58,340 Created temporary directory: /tmp/pip-wheel-k9v3j2fe 2024-04-23T22:39:58,340 Building wheel for scilpy (setup.py): started 2024-04-23T22:39:58,341 Destination directory: /tmp/pip-wheel-k9v3j2fe 2024-04-23T22:39:58,341 Running command python setup.py bdist_wheel 2024-04-23T22:39:59,234 /usr/local/lib/python3.9/dist-packages/setuptools/__init__.py:80: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2024-04-23T22:39:59,234 !! 2024-04-23T22:39:59,234 ******************************************************************************** 2024-04-23T22:39:59,235 Requirements should be satisfied by a PEP 517 installer. 2024-04-23T22:39:59,235 If you are using pip, you can try `pip install --use-pep517`. 2024-04-23T22:39:59,235 ******************************************************************************** 2024-04-23T22:39:59,235 !! 2024-04-23T22:39:59,235 dist.fetch_build_eggs(dist.setup_requires) 2024-04-23T22:39:59,515 running bdist_wheel 2024-04-23T22:39:59,620 running build 2024-04-23T22:39:59,621 running build_py 2024-04-23T22:39:59,665 creating build 2024-04-23T22:39:59,665 creating build/lib.linux-armv7l-cpython-39 2024-04-23T22:39:59,666 creating build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,667 copying scripts/scil_tractogram_commit.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,670 copying scripts/scil_lesions_info.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,672 copying scripts/scil_viz_tractogram_seeds_3d.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,674 copying scripts/scil_sh_to_sf.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,676 copying scripts/scil_tractogram_filter_by_anatomy.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,679 copying scripts/scil_tractogram_shuffle.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,680 copying scripts/scil_connectivity_math.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,683 copying scripts/scil_volume_count_non_zero_voxels.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,684 copying scripts/scil_volume_stats_in_labels.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,686 copying scripts/scil_bundle_compute_centroid.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,687 copying scripts/scil_viz_tractogram_seeds.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,689 copying scripts/scil_frf_ssst.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,691 copying scripts/scil_rgb_convert.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,693 copying scripts/scil_surface_flip.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,695 copying scripts/scil_tractogram_extract_ushape.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,696 copying scripts/scil_surface_convert.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,698 copying scripts/scil_gradients_modify_axes.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,700 copying scripts/scil_bundle_diameter.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,702 copying scripts/scil_connectivity_compute_pca.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,705 copying scripts/scil_gradients_validate_correct_eddy.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,706 copying scripts/scil_NODDI_maps.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,708 copying scripts/scil_tractogram_segment_and_score.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,711 copying scripts/scil_connectivity_compute_matrices.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,714 copying scripts/scil_tractogram_compute_TODI.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,715 copying scripts/scil_tractogram_flip.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,717 copying scripts/scil_viz_gradients_screenshot.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,719 copying scripts/scil_bundle_mean_std.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,721 copying scripts/scil_bundle_score_many_bundles_one_tractogram.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,723 copying scripts/scil_tractogram_compute_density_map.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,725 copying scripts/scil_json_convert_entries_to_xlsx.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,727 copying scripts/scil_bundle_reject_outliers.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,729 copying scripts/scil_NODDI_priors.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,731 copying scripts/scil_connectivity_pairwise_agreement.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,733 copying scripts/scil_tractogram_resample_nb_points.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,735 copying scripts/scil_volume_resample.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,736 copying scripts/scil_dwi_to_sh.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,738 copying scripts/scil_tractogram_cut_streamlines.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,740 copying scripts/scil_tractogram_convert_hdf5_to_trk.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,742 copying scripts/scil_fodf_memsmt.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,744 copying scripts/scil_viz_bundle.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,747 copying scripts/scil_tractogram_register.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,748 copying scripts/scil_volume_reshape_to_reference.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,754 copying scripts/scil_tractogram_qbx.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,756 copying scripts/__init__.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,757 copying scripts/scil_stats_group_comparison.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,759 copying scripts/scil_bundle_mean_fixel_afd_from_hdf5.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,761 copying scripts/scil_fodf_msmt.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,764 copying scripts/scil_tractogram_project_streamlines_to_map.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,766 copying scripts/scil_labels_split_volume_from_lut.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,767 copying scripts/scil_surface_smooth.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,769 copying scripts/scil_connectivity_hdf5_average_density_map.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,771 copying scripts/scil_sh_to_rish.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,773 copying scripts/scil_dwi_detect_volume_outliers.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,774 copying scripts/scil_dwi_split_by_indices.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,776 copying scripts/scil_labels_combine.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,778 copying scripts/scil_bundle_compute_endpoints_map.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,780 copying scripts/scil_tractogram_math.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,782 copying scripts/scil_dwi_powder_average.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,784 copying scripts/scil_connectivity_reorder_rois.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,786 copying scripts/scil_tractogram_remove_invalid.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,788 copying scripts/scil_bundle_volume_per_label.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,790 copying scripts/scil_tractogram_fix_trk.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,792 copying scripts/scil_tractogram_resample.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,794 copying scripts/scil_tractogram_assign_custom_color.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,796 copying scripts/scil_labels_dilate.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,798 copying scripts/scil_viz_bingham_fit.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,800 copying scripts/scil_bundle_label_map.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,802 copying scripts/scil_viz_dti_screenshot.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,805 copying scripts/scil_bids_validate.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,807 copying scripts/scil_sh_fusion.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,809 copying scripts/scil_tracking_local_dev.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,811 copying scripts/scil_labels_remove.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,812 copying scripts/scil_frf_msmt.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,815 copying scripts/scil_tractogram_convert.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,817 copying scripts/scil_json_harmonize_entries.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,818 copying scripts/scil_dki_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,820 copying scripts/scil_dwi_prepare_topup_command.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,822 copying scripts/scil_frf_set_diffusivities.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,824 copying scripts/scil_viz_bundle_screenshot_mosaic.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,827 copying scripts/scil_frf_mean.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,828 copying scripts/scil_dwi_convert_FDF.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,830 copying scripts/scil_dwi_reorder_philips.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,832 copying scripts/scil_header_validate_compatibility.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,834 copying scripts/scil_bingham_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,836 copying scripts/scil_sh_to_aodf.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,838 copying scripts/scil_viz_bundle_screenshot_mni.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,840 copying scripts/scil_fodf_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,843 copying scripts/scil_bundle_pairwise_comparison.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,845 copying scripts/scil_mti_adjust_B1_header.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,847 copying scripts/scil_volume_apply_transform.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,849 copying scripts/scil_search_keywords.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,851 copying scripts/scil_tractogram_count_streamlines.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,852 copying scripts/scil_dwi_extract_shell.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,854 copying scripts/scil_tractogram_segment_one_bundle.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,856 copying scripts/scil_tractogram_apply_transform_to_hdf5.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,858 copying scripts/scil_volume_math.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,860 copying scripts/scil_bundle_mean_fixel_afd.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,862 copying scripts/scil_tractogram_compress.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,864 copying scripts/scil_sh_convert.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,865 copying scripts/scil_connectivity_graph_measures.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,867 copying scripts/scil_header_print_info.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,869 copying scripts/scil_tractogram_uniformize_endpoints.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,871 copying scripts/scil_tractogram_filter_by_roi.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,873 copying scripts/scil_tracking_local.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,876 copying scripts/scil_frf_memsmt.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,878 copying scripts/scil_viz_connectivity.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,881 copying scripts/scil_tractogram_dpp_math.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,883 copying scripts/scil_tractogram_seed_density_map.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,885 copying scripts/scil_tractogram_detect_loops.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,887 copying scripts/scil_btensor_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,890 copying scripts/scil_dwi_apply_bias_field.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,892 copying scripts/scil_gradients_round_bvals.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,893 copying scripts/scil_tractogram_segment_bundles_for_connectivity.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,896 copying scripts/scil_fodf_ssst.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,898 copying scripts/scil_dwi_extract_b0.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,900 copying scripts/scil_gradients_apply_transform.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,901 copying scripts/scil_connectivity_filter.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,904 copying scripts/scil_dwi_compute_snr.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,906 copying scripts/scil_gradients_convert.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,907 copying scripts/scil_tracking_pft_maps.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,909 copying scripts/scil_gradients_validate_correct.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,911 copying scripts/scil_tractogram_apply_transform.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,913 copying scripts/scil_bundle_shape_measures.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,916 copying scripts/scil_connectivity_print_filenames.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,917 copying scripts/scil_tractogram_smooth.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,919 copying scripts/scil_tractogram_print_info.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,921 copying scripts/scil_volume_b0_synthesis.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,923 copying scripts/scil_tractogram_project_map_to_streamlines.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,925 copying scripts/scil_fodf_max_in_ventricles.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,927 copying scripts/scil_tractogram_filter_by_orientation.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,929 copying scripts/scil_connectivity_compare_populations.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,931 copying scripts/scil_denoising_nlmeans.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,933 copying scripts/scil_tractogram_filter_by_length.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,935 copying scripts/scil_labels_split_volume_by_ids.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,936 copying scripts/scil_surface_apply_transform.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,938 copying scripts/scil_tractogram_pairwise_comparison.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,940 copying scripts/scil_bundle_generate_priors.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,943 copying scripts/scil_viz_volume_screenshot_mosaic.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,945 copying scripts/scil_bundle_score_same_bundle_many_segmentations.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,947 copying scripts/scil_bundle_clean_qbx_clusters.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,949 copying scripts/scil_volume_flip.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,951 copying scripts/scil_tracking_pft_maps_edit.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,952 copying scripts/scil_dwi_concatenate.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,954 copying scripts/scil_tractogram_assign_uniform_color.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,956 copying scripts/scil_tracking_pft.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,959 copying scripts/scil_volume_remove_outliers_ransac.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,963 copying scripts/scil_freewater_priors.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,965 copying scripts/scil_qball_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,967 copying scripts/scil_gradients_generate_sampling.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,969 copying scripts/scil_tractogram_segment_bundles.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,971 copying scripts/scil_dti_convert_tensors.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,973 copying scripts/scil_volume_stats_in_ROI.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,975 copying scripts/scil_fodf_to_bingham.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,977 copying scripts/scil_viz_fodf.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,979 copying scripts/scil_viz_volume_histogram.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,981 copying scripts/scil_dti_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,983 copying scripts/scil_viz_volume_scatterplot.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,985 copying scripts/scil_freewater_maps.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,987 copying scripts/scil_volume_crop.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,989 copying scripts/scil_aodf_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,991 copying scripts/scil_bundle_mean_fixel_bingham_metric.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,993 copying scripts/scil_get_version.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,995 copying scripts/scil_json_merge_entries.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,997 copying scripts/scil_dwi_prepare_eddy_command.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:39:59,999 copying scripts/scil_connectivity_normalize.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:40:00,001 copying scripts/scil_mti_maps_MT.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:40:00,003 copying scripts/scil_viz_volume_screenshot.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:40:00,005 copying scripts/scil_plot_stats_per_point.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:40:00,007 copying scripts/scil_mti_maps_ihMT.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:40:00,009 copying scripts/scil_tractogram_split.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:40:00,011 copying scripts/scil_bundle_filter_by_occurence.py -> build/lib.linux-armv7l-cpython-39/scripts 2024-04-23T22:40:00,014 creating build/lib.linux-armv7l-cpython-39/scilpy 2024-04-23T22:40:00,015 copying scilpy/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy 2024-04-23T22:40:00,017 copying scilpy/version.py -> build/lib.linux-armv7l-cpython-39/scilpy 2024-04-23T22:40:00,025 creating build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,026 copying scripts/tests/test_tractogram_assign_uniform_color.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,028 copying scripts/tests/test_json_convert_entries_to_xlsx.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,029 copying scripts/tests/test_bundle_score_many_bundles_one_tractogram.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,031 copying scripts/tests/test_tractogram_split.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,032 copying scripts/tests/test_volume_stats_in_labels.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,034 copying scripts/tests/test_dwi_reorder_philips.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,036 copying scripts/tests/test_freewater_maps.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,037 copying scripts/tests/test_viz_fodf.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,039 copying scripts/tests/test_viz_connectivity.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,040 copying scripts/tests/test_labels_dilate.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,042 copying scripts/tests/test_mti_maps_MT.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,044 copying scripts/tests/test_dwi_compute_snr.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,046 copying scripts/tests/test_header_validate_compatibility.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,047 copying scripts/tests/test_stats_group_comparison.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,049 copying scripts/tests/test_connectivity_print_filenames.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,050 copying scripts/tests/test_freewater_priors.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,052 copying scripts/tests/test_volume_crop.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,053 copying scripts/tests/test_labels_split_volume_from_lut.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,055 copying scripts/tests/test_tractogram_convert.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,056 copying scripts/tests/test_fodf_max_in_ventricles.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,058 copying scripts/tests/test_tractogram_dpp_math.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,060 copying scripts/tests/test_volume_reshape_to_reference.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,062 copying scripts/tests/test_tractogram_qbx.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,064 copying scripts/tests/test_frf_msmt.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,065 copying scripts/tests/test_viz_volume_screenshot.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,067 copying scripts/tests/test_tractogram_filter_by_roi.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,069 copying scripts/tests/test_tractogram_segment_one_bundles.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,070 copying scripts/tests/test_tractogram_filter_by_anatomy.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,072 copying scripts/tests/test_tractogram_math.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,074 copying scripts/tests/test_tractogram_register.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,075 copying scripts/tests/test_tractogram_segment_bundles_for_connectivity.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,077 copying scripts/tests/test_tractogram_flip.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,078 copying scripts/tests/test_tractogram_resample.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,080 copying scripts/tests/test_tractogram_filter_by_orientation.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,082 copying scripts/tests/test_connectivity_filter.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,083 copying scripts/tests/test_bundle_volume_per_label.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,085 copying scripts/tests/test_connectivity_pairwise_agreement.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,086 copying scripts/tests/test_dwi_extract_b0.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,088 copying scripts/tests/test_tracking_pft_maps_edit.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,089 copying scripts/tests/test_viz_gradients_screenshot.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,091 copying scripts/tests/test_tractogram_apply_transform.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,092 copying scripts/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,094 copying scripts/tests/test_tracking_local.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,096 copying scripts/tests/test_viz_tractogram_seeds.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,098 copying scripts/tests/test_volume_b0_synthesis.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,099 copying scripts/tests/test_bundle_pairwise_comparison.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,101 copying scripts/tests/test_tractogram_segment_and_score.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,103 copying scripts/tests/test_frf_mean.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,104 copying scripts/tests/test_tractogram_compute_TODI.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,106 copying scripts/tests/test_aodf_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,108 copying scripts/tests/test_tracking_local_dev.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,110 copying scripts/tests/test_viz_volume_histogram.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,112 copying scripts/tests/test_dwi_extract_shell.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,113 copying scripts/tests/test_tractogram_print_info.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,115 copying scripts/tests/test_tractogram_assign_custom_color.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,117 copying scripts/tests/test_bingham_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,118 copying scripts/tests/test_viz_bundle_screenshot_mosaic.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,120 copying scripts/tests/test_bundle_filter_by_occurence.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,122 copying scripts/tests/test_gradients_validate_correct_eddy.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,123 copying scripts/tests/test_tractogram_resample_nb_points.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,125 copying scripts/tests/test_tractogram_compute_density_map.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,127 copying scripts/tests/test_tractogram_project_streamlines_to_map.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,129 copying scripts/tests/test_mti_adjust_B1_header.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,131 copying scripts/tests/test_viz_volume_screenshot_mosaic.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,132 copying scripts/tests/test_search_keywords.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,134 copying scripts/tests/test_tractogram_cut_streamlines.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,136 copying scripts/tests/test_bundle_generate_priors.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,137 copying scripts/tests/test_volume_resample.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,139 copying scripts/tests/test_tractogram_detect_loops.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,141 copying scripts/tests/test_dwi_to_sh.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,142 copying scripts/tests/test_header_print_info.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,144 copying scripts/tests/test_fodf_to_bingham.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,146 copying scripts/tests/test_viz_volume_scatterplot.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,148 copying scripts/tests/test_bundle_clean_qbx_clusters.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,150 copying scripts/tests/test_dwi_powder_average.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,151 copying scripts/tests/test_viz_tractogram_seeds_3d.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,153 copying scripts/tests/test_json_harmonize_entries.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,155 copying scripts/tests/test_dwi_convert_FDF.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,156 copying scripts/tests/test_labels_remove.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,158 copying scripts/tests/test_sh_fusion.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,160 copying scripts/tests/test_dti_convert_tensors.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,162 copying scripts/tests/test_connectivity_normalize.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,164 copying scripts/tests/test_viz_dti_screenshot.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,167 copying scripts/tests/test_tractogram_uniformize_endpoints.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,168 copying scripts/tests/test_tractogram_commit.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,170 copying scripts/tests/test_labels_split_volume_by_ids.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,172 copying scripts/tests/test_labels_combine.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,174 copying scripts/tests/test_volume_count_non_zero_voxels.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,176 copying scripts/tests/test_bundle_mean_fixel_bingham_metric.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,177 copying scripts/tests/test_bundle_label_map.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,179 copying scripts/tests/test_surface_convert.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,181 copying scripts/tests/test_fodf_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,183 copying scripts/tests/test_dti_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,184 copying scripts/tests/test_NODDI_priors.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,186 copying scripts/tests/test_tractogram_filter_by_length.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,188 copying scripts/tests/test_tracking_pft_maps.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,190 copying scripts/tests/test_dwi_apply_bias_field.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,192 copying scripts/tests/test_mti_maps_ihMT.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,194 copying scripts/tests/test_bundle_diameter.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,196 copying scripts/tests/test_connectivity_math.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,198 copying scripts/tests/test_surface_smooth.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,200 copying scripts/tests/test_bundle_shape_measures.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,202 copying scripts/tests/test_fodf_msmt.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,204 copying scripts/tests/test_frf_set_diffusivities.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,206 copying scripts/tests/test_tractogram_shuffle.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,208 copying scripts/tests/test_connectivity_graph_measures.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,210 copying scripts/tests/test_volume_flip.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,212 copying scripts/tests/test_tracking_pft.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,214 copying scripts/tests/test_sh_to_rish.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,216 copying scripts/tests/test_tractogram_compress.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,218 copying scripts/tests/test_fodf_memsmt.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,220 copying scripts/tests/test_tractogram_smooth.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,221 copying scripts/tests/test_gradients_apply_transform.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,223 copying scripts/tests/test_gradients_modify_axes.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,225 copying scripts/tests/test_bundle_mean_fixel_afd_from_hdf5.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,227 copying scripts/tests/test_connectivity_compute_pca.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,228 copying scripts/tests/test_connectivity_compare_populations.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,230 copying scripts/tests/test_tractogram_count_streamlines.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,232 copying scripts/tests/test_connectivity_reorder_rois.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,234 copying scripts/tests/test_volume_stats_in_ROI.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,235 copying scripts/tests/test_fodf_ssst.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,237 copying scripts/tests/test_bundle_score_same_bundle_many_segmentations.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,239 copying scripts/tests/test_gradients_round_bvals.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,241 copying scripts/tests/test_tractogram_apply_transform_to_hdf5.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,242 copying scripts/tests/test_plot_stats_per_point.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,244 copying scripts/tests/test_sh_convert.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,246 copying scripts/tests/test_qball_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,248 copying scripts/tests/test_bundle_mean_std.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,250 copying scripts/tests/test_surface_flip.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,252 copying scripts/tests/test_tractogram_convert_hdf5_to_trk.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,254 copying scripts/tests/test_connectivity_compute_matrices.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,256 copying scripts/tests/test_tractogram_fix_trk.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,258 copying scripts/tests/test_surface_apply_transform.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,259 copying scripts/tests/test_frf_memsmt.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,261 copying scripts/tests/test_connectivity_hdf5_average_density_map.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,263 copying scripts/tests/test_tractogram_segment_bundles.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,265 copying scripts/tests/test_bundle_mean_fixel_afd.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,267 copying scripts/tests/test_tractogram_remove_invalid.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,268 copying scripts/tests/test_bundle_compute_centroid.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,270 copying scripts/tests/test_dki_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,272 copying scripts/tests/test_lesions_info.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,274 copying scripts/tests/test_bundle_compute_endpoints_map.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,275 copying scripts/tests/test_viz_bundle.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,277 copying scripts/tests/test_sh_to_aodf.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,279 copying scripts/tests/test_dwi_prepare_eddy_command.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,281 copying scripts/tests/test_json_merge_entries.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,283 copying scripts/tests/test_tractogram_extract_ushape.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,284 copying scripts/tests/test_volume_math.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,286 copying scripts/tests/test_dwi_concatenate.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,288 copying scripts/tests/test_gradients_generate_sampling.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,290 copying scripts/tests/test_gradients_convert.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,292 copying scripts/tests/test_volume_apply_transform.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,294 copying scripts/tests/test_volume_remove_outliers_ransac.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,295 copying scripts/tests/test_tractogram_project_map_to_streamlines.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,297 copying scripts/tests/test_NODDI_maps.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,299 copying scripts/tests/test_denoising_nlmeans.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,301 copying scripts/tests/test_sh_to_sf.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,303 copying scripts/tests/test_tractogram_pairwise_comparison.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,305 copying scripts/tests/test_dwi_split_by_indices.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,307 copying scripts/tests/test_viz_bingham_fit.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,310 copying scripts/tests/test_tractogram_seed_density_map.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,312 copying scripts/tests/test_frf_ssst.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,314 copying scripts/tests/test_dwi_prepare_topup_command.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,316 copying scripts/tests/test_bids_validate.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,319 copying scripts/tests/test_viz_bundle_screenshot_mni.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,321 copying scripts/tests/test_bundle_reject_outliers.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,324 copying scripts/tests/test_rgb_convert.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,326 copying scripts/tests/test_gradients_validate_correct.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,328 copying scripts/tests/test_dwi_detect_volume_outliers.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,330 copying scripts/tests/test_btensor_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts/tests 2024-04-23T22:40:00,343 creating build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,345 copying scripts/legacy/scil_assign_custom_color_to_tractogram.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,347 copying scripts/legacy/scil_reshape_to_reference.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,349 copying scripts/legacy/scil_compute_bundle_mean_std_per_point.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,351 copying scripts/legacy/scil_remove_labels.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,354 copying scripts/legacy/scil_cut_streamlines.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,356 copying scripts/legacy/scil_resample_bvals.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,358 copying scripts/legacy/scil_filter_tractogram_anatomically.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,360 copying scripts/legacy/scil_flip_streamlines.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,362 copying scripts/legacy/scil_compute_hdf5_average_density_map.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,364 copying scripts/legacy/scil_compute_mean_frf.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,367 copying scripts/legacy/scil_flip_gradients.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,369 copying scripts/legacy/scil_estimate_bundles_diameter.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,371 copying scripts/legacy/scil_screenshot_dti.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,373 copying scripts/legacy/scil_swap_gradient_axis.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,375 copying scripts/legacy/scil_split_volume_by_labels.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,377 copying scripts/legacy/scil_apply_transform_to_surface.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,379 copying scripts/legacy/scil_extract_dwi_shell.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,382 copying scripts/legacy/scil_combine_labels.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,384 copying scripts/legacy/scil_resample_volume.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,386 copying scripts/legacy/scil_compute_memsmt_frf.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,388 copying scripts/legacy/scil_compute_sf_from_sh.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,391 copying scripts/legacy/scil_evaluate_connectivity_graph_measures.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,393 copying scripts/legacy/scil_resample_tractogram.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,395 copying scripts/legacy/scil_project_streamlines_to_map.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,398 copying scripts/legacy/scil_visualize_bingham_fit.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,400 copying scripts/legacy/scil_compress_streamlines.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,401 copying scripts/legacy/scil_convert_tensors.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,403 copying scripts/legacy/scil_prepare_eddy_command.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,405 copying scripts/legacy/scil_evaluate_connectivity_pairwise_agreement_measures.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,407 copying scripts/legacy/scil_visualize_seeds_3d.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,409 copying scripts/legacy/scil_validate_bids.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,410 copying scripts/legacy/scil_run_commit.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,412 copying scripts/legacy/scil_detect_dwi_volume_outliers.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,414 copying scripts/legacy/scil_apply_transform_to_bvecs.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,416 copying scripts/legacy/scil_evaluate_bundles_pairwise_agreement_measures.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,418 copying scripts/legacy/scil_compute_fodf_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,419 copying scripts/legacy/scil_compute_msmt_frf.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,421 copying scripts/legacy/scil_convert_gradients_mrtrix_to_fsl.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,423 copying scripts/legacy/scil_register_tractogram.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,424 copying scripts/legacy/scil_shuffle_streamlines.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,426 copying scripts/legacy/scil_compute_centroid.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,428 copying scripts/legacy/scil_split_image.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,430 copying scripts/legacy/scil_set_response_function.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,431 copying scripts/legacy/scil_count_streamlines.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,433 copying scripts/legacy/scil_snr_in_roi.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,435 copying scripts/legacy/scil_plot_mean_std_per_point.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,436 copying scripts/legacy/__init__.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,438 copying scripts/legacy/scil_smooth_surface.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,439 copying scripts/legacy/scil_smooth_streamlines.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,441 copying scripts/legacy/scil_compute_endpoints_map.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,443 copying scripts/legacy/scil_compute_seed_by_labels.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,444 copying scripts/legacy/scil_compute_rish_from_sh.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,446 copying scripts/legacy/scil_compute_qball_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,448 copying scripts/legacy/scil_compute_metrics_stats_in_ROI.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,450 copying scripts/legacy/scil_run_nlmeans.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,451 copying scripts/legacy/scil_outlier_rejection.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,453 copying scripts/legacy/scil_assign_uniform_color_to_tractograms.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,455 copying scripts/legacy/scil_merge_sh.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,457 copying scripts/legacy/scil_uniformize_streamlines_endpoints.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,458 copying scripts/legacy/scil_compute_ssst_fodf.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,460 copying scripts/legacy/scil_visualize_scatterplot.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,462 copying scripts/legacy/scil_filter_tractogram.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,463 copying scripts/legacy/scil_visualize_fodf.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,465 copying scripts/legacy/scil_compute_freewater.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,467 copying scripts/legacy/scil_compute_qbx.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,468 copying scripts/legacy/scil_compute_todi.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,470 copying scripts/legacy/scil_compute_maps_for_particle_filter_tracking.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,471 copying scripts/legacy/scil_evaluate_bundles_individual_measures.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,473 copying scripts/legacy/scil_group_comparison.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,475 copying scripts/legacy/scil_execute_asymmetric_filtering.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,476 copying scripts/legacy/scil_save_connections_from_hdf5.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,478 copying scripts/legacy/scil_compute_memsmt_fodf.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,480 copying scripts/legacy/scil_remove_invalid_streamlines.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,481 copying scripts/legacy/scil_reorder_dwi_philips.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,483 copying scripts/legacy/scil_score_tractogram.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,485 copying scripts/legacy/scil_compute_connectivity.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,486 copying scripts/legacy/scil_recognize_multi_bundles.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,488 copying scripts/legacy/scil_compute_dti_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,490 copying scripts/legacy/scil_filter_streamlines_by_length.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,491 copying scripts/legacy/scil_compute_msmt_fodf.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,493 copying scripts/legacy/scil_normalize_connectivity.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,495 copying scripts/legacy/scil_compute_NODDI.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,496 copying scripts/legacy/scil_visualize_bundles.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,498 copying scripts/legacy/scil_remove_outliers_ransac.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,500 copying scripts/legacy/scil_convert_fdf.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,501 copying scripts/legacy/scil_print_connectivity_filenames.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,503 copying scripts/legacy/scil_extract_ushape.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,505 copying scripts/legacy/scil_compute_local_tracking.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,506 copying scripts/legacy/scil_concatenate_dwi.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,508 copying scripts/legacy/scil_compute_mean_fixel_afd_from_bundles.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,509 copying scripts/legacy/scil_recognize_single_bundle.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,511 copying scripts/legacy/scil_compare_connectivity.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,513 copying scripts/legacy/scil_compute_fodf_max_in_ventricles.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,514 copying scripts/legacy/scil_convert_rgb.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,516 copying scripts/legacy/scil_streamlines_math.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,518 copying scripts/legacy/scil_compute_ssst_frf.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,519 copying scripts/legacy/scil_generate_priors_from_bundle.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,521 copying scripts/legacy/scil_compute_sh_from_signal.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,523 copying scripts/legacy/scil_compute_bundle_mean_std.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,524 copying scripts/legacy/scil_compute_ihMT_maps.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,526 copying scripts/legacy/scil_crop_volume.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,527 copying scripts/legacy/scil_clean_qbx_clusters.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,529 copying scripts/legacy/scil_perform_majority_vote.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,531 copying scripts/legacy/scil_add_tracking_mask_to_pft_maps.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,532 copying scripts/legacy/scil_fit_bingham_to_fodf.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,534 copying scripts/legacy/scil_compute_streamlines_density_map.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,535 copying scripts/legacy/scil_execute_angle_aware_bilateral_filtering.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,537 copying scripts/legacy/scil_generate_gradient_sampling.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,539 copying scripts/legacy/scil_compute_pft.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,540 copying scripts/legacy/scil_apply_bias_field_on_dwi.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,542 copying scripts/legacy/scil_reorder_connectivity.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,543 copying scripts/legacy/scil_apply_transform_to_hdf5.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,545 copying scripts/legacy/scil_convert_gradients_fsl_to_mrtrix.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,547 copying scripts/legacy/scil_dilate_labels.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,548 copying scripts/legacy/scil_compute_MT_maps.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,550 copying scripts/legacy/scil_compute_NODDI_priors.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,552 copying scripts/legacy/scil_fix_dsi_studio_trk.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,553 copying scripts/legacy/scil_compute_pca.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,555 copying scripts/legacy/scil_split_tractogram.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,556 copying scripts/legacy/scil_visualize_histogram.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,558 copying scripts/legacy/scil_convert_sh_basis.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,560 copying scripts/legacy/scil_flip_volume.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,561 copying scripts/legacy/scil_detect_streamlines_loops.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,563 copying scripts/legacy/scil_prepare_topup_command.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,564 copying scripts/legacy/scil_merge_json.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,566 copying scripts/legacy/scil_evaluate_bundles_binary_classification_measures.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,568 copying scripts/legacy/scil_harmonize_json.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,570 copying scripts/legacy/scil_visualize_gradients.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,571 copying scripts/legacy/scil_flip_surface.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,573 copying scripts/legacy/scil_compute_asym_odf_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,574 copying scripts/legacy/scil_print_header.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,576 copying scripts/legacy/scil_screenshot_bundle.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,578 copying scripts/legacy/scil_compute_local_tracking_dev.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,579 copying scripts/legacy/scil_validate_and_correct_bvecs.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,581 copying scripts/legacy/scil_apply_transform_to_tractogram.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,582 copying scripts/legacy/scil_compute_bundle_volume_per_label.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,584 copying scripts/legacy/scil_compute_bundle_volume.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,585 copying scripts/legacy/scil_compute_seed_density_map.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,587 copying scripts/legacy/scil_compute_mean_fixel_afd_from_hdf5.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,589 copying scripts/legacy/scil_image_math.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,590 copying scripts/legacy/scil_compute_lobe_specific_fodf_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,592 copying scripts/legacy/scil_convert_tractogram.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,593 copying scripts/legacy/scil_validate_and_correct_eddy_gradients.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,595 copying scripts/legacy/scil_count_non_zero_voxels.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,597 copying scripts/legacy/scil_split_volume_by_ids.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,598 copying scripts/legacy/scil_compute_streamlines_length_stats.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,600 copying scripts/legacy/scil_screenshot_volume.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,602 copying scripts/legacy/scil_apply_transform_to_image.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,603 copying scripts/legacy/scil_resample_streamlines.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,605 copying scripts/legacy/scil_compute_divide.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,607 copying scripts/legacy/scil_visualize_connectivity.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,608 copying scripts/legacy/scil_compute_bundle_voxel_label_map.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,610 copying scripts/legacy/scil_decompose_connectivity.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,612 copying scripts/legacy/scil_convert_surface.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,614 copying scripts/legacy/scil_compute_powder_average.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,615 copying scripts/legacy/scil_visualize_bundles_mosaic.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,617 copying scripts/legacy/scil_score_bundles.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,619 copying scripts/legacy/scil_filter_streamlines_by_orientation.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,620 copying scripts/legacy/scil_convert_json_to_xlsx.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,622 copying scripts/legacy/scil_compute_mean_fixel_lobe_metric_from_bundles.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,624 copying scripts/legacy/scil_verify_space_attributes_compatibility.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,626 copying scripts/legacy/scil_extract_b0.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,627 copying scripts/legacy/scil_filter_connectivity.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,629 copying scripts/legacy/scil_compute_kurtosis_metrics.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,630 copying scripts/legacy/scil_visualize_seeds.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,632 copying scripts/legacy/scil_analyse_lesions_load.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,634 copying scripts/legacy/scil_screenshot_volume_mosaic_overlap.py -> build/lib.linux-armv7l-cpython-39/scripts/legacy 2024-04-23T22:40:00,636 creating build/lib.linux-armv7l-cpython-39/scilpy/segment 2024-04-23T22:40:00,637 copying scilpy/segment/recobundlesx.py -> build/lib.linux-armv7l-cpython-39/scilpy/segment 2024-04-23T22:40:00,639 copying scilpy/segment/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/segment 2024-04-23T22:40:00,641 copying scilpy/segment/voting_scheme.py -> build/lib.linux-armv7l-cpython-39/scilpy/segment 2024-04-23T22:40:00,643 copying scilpy/segment/streamlines.py -> build/lib.linux-armv7l-cpython-39/scilpy/segment 2024-04-23T22:40:00,645 copying scilpy/segment/models.py -> build/lib.linux-armv7l-cpython-39/scilpy/segment 2024-04-23T22:40:00,647 copying scilpy/segment/tractogram_from_roi.py -> build/lib.linux-armv7l-cpython-39/scilpy/segment 2024-04-23T22:40:00,650 creating build/lib.linux-armv7l-cpython-39/scilpy/reconst 2024-04-23T22:40:00,651 copying scilpy/reconst/sh.py -> build/lib.linux-armv7l-cpython-39/scilpy/reconst 2024-04-23T22:40:00,654 copying scilpy/reconst/mti.py -> build/lib.linux-armv7l-cpython-39/scilpy/reconst 2024-04-23T22:40:00,656 copying scilpy/reconst/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/reconst 2024-04-23T22:40:00,657 copying scilpy/reconst/fiber_coherence.py -> build/lib.linux-armv7l-cpython-39/scilpy/reconst 2024-04-23T22:40:00,659 copying scilpy/reconst/aodf.py -> build/lib.linux-armv7l-cpython-39/scilpy/reconst 2024-04-23T22:40:00,660 copying scilpy/reconst/fodf.py -> build/lib.linux-armv7l-cpython-39/scilpy/reconst 2024-04-23T22:40:00,663 copying scilpy/reconst/utils.py -> build/lib.linux-armv7l-cpython-39/scilpy/reconst 2024-04-23T22:40:00,664 copying scilpy/reconst/bingham.py -> build/lib.linux-armv7l-cpython-39/scilpy/reconst 2024-04-23T22:40:00,667 copying scilpy/reconst/divide.py -> build/lib.linux-armv7l-cpython-39/scilpy/reconst 2024-04-23T22:40:00,669 copying scilpy/reconst/frf.py -> build/lib.linux-armv7l-cpython-39/scilpy/reconst 2024-04-23T22:40:00,672 creating build/lib.linux-armv7l-cpython-39/scilpy/preprocessing 2024-04-23T22:40:00,672 copying scilpy/preprocessing/distortion_correction.py -> build/lib.linux-armv7l-cpython-39/scilpy/preprocessing 2024-04-23T22:40:00,675 copying scilpy/preprocessing/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/preprocessing 2024-04-23T22:40:00,677 creating build/lib.linux-armv7l-cpython-39/scilpy/image 2024-04-23T22:40:00,677 copying scilpy/image/labels.py -> build/lib.linux-armv7l-cpython-39/scilpy/image 2024-04-23T22:40:00,680 copying scilpy/image/reslice.py -> build/lib.linux-armv7l-cpython-39/scilpy/image 2024-04-23T22:40:00,682 copying scilpy/image/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/image 2024-04-23T22:40:00,683 copying scilpy/image/volume_math.py -> build/lib.linux-armv7l-cpython-39/scilpy/image 2024-04-23T22:40:00,685 copying scilpy/image/volume_space_management.py -> build/lib.linux-armv7l-cpython-39/scilpy/image 2024-04-23T22:40:00,687 copying scilpy/image/utils.py -> build/lib.linux-armv7l-cpython-39/scilpy/image 2024-04-23T22:40:00,689 copying scilpy/image/volume_b0_synthesis.py -> build/lib.linux-armv7l-cpython-39/scilpy/image 2024-04-23T22:40:00,691 copying scilpy/image/volume_operations.py -> build/lib.linux-armv7l-cpython-39/scilpy/image 2024-04-23T22:40:00,694 creating build/lib.linux-armv7l-cpython-39/scilpy/viz 2024-04-23T22:40:00,695 copying scilpy/viz/slice.py -> build/lib.linux-armv7l-cpython-39/scilpy/viz 2024-04-23T22:40:00,697 copying scilpy/viz/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/viz 2024-04-23T22:40:00,698 copying scilpy/viz/screenshot.py -> build/lib.linux-armv7l-cpython-39/scilpy/viz 2024-04-23T22:40:00,700 copying scilpy/viz/utils.py -> build/lib.linux-armv7l-cpython-39/scilpy/viz 2024-04-23T22:40:00,702 copying scilpy/viz/color.py -> build/lib.linux-armv7l-cpython-39/scilpy/viz 2024-04-23T22:40:00,704 copying scilpy/viz/gradients.py -> build/lib.linux-armv7l-cpython-39/scilpy/viz 2024-04-23T22:40:00,707 creating build/lib.linux-armv7l-cpython-39/scilpy/stats 2024-04-23T22:40:00,708 copying scilpy/stats/matrix_stats.py -> build/lib.linux-armv7l-cpython-39/scilpy/stats 2024-04-23T22:40:00,710 copying scilpy/stats/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/stats 2024-04-23T22:40:00,711 copying scilpy/stats/stats.py -> build/lib.linux-armv7l-cpython-39/scilpy/stats 2024-04-23T22:40:00,713 copying scilpy/stats/utils.py -> build/lib.linux-armv7l-cpython-39/scilpy/stats 2024-04-23T22:40:00,716 creating build/lib.linux-armv7l-cpython-39/scilpy/gradients 2024-04-23T22:40:00,717 copying scilpy/gradients/gen_gradient_sampling.py -> build/lib.linux-armv7l-cpython-39/scilpy/gradients 2024-04-23T22:40:00,720 copying scilpy/gradients/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/gradients 2024-04-23T22:40:00,721 copying scilpy/gradients/optimize_gradient_sampling.py -> build/lib.linux-armv7l-cpython-39/scilpy/gradients 2024-04-23T22:40:00,723 copying scilpy/gradients/utils.py -> build/lib.linux-armv7l-cpython-39/scilpy/gradients 2024-04-23T22:40:00,725 copying scilpy/gradients/bvec_bval_tools.py -> build/lib.linux-armv7l-cpython-39/scilpy/gradients 2024-04-23T22:40:00,728 creating build/lib.linux-armv7l-cpython-39/scilpy/connectivity 2024-04-23T22:40:00,728 copying scilpy/connectivity/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/connectivity 2024-04-23T22:40:00,730 copying scilpy/connectivity/connectivity_tools.py -> build/lib.linux-armv7l-cpython-39/scilpy/connectivity 2024-04-23T22:40:00,733 creating build/lib.linux-armv7l-cpython-39/scilpy/io 2024-04-23T22:40:00,734 copying scilpy/io/image.py -> build/lib.linux-armv7l-cpython-39/scilpy/io 2024-04-23T22:40:00,736 copying scilpy/io/mti.py -> build/lib.linux-armv7l-cpython-39/scilpy/io 2024-04-23T22:40:00,738 copying scilpy/io/btensor.py -> build/lib.linux-armv7l-cpython-39/scilpy/io 2024-04-23T22:40:00,740 copying scilpy/io/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/io 2024-04-23T22:40:00,741 copying scilpy/io/fetcher.py -> build/lib.linux-armv7l-cpython-39/scilpy/io 2024-04-23T22:40:00,743 copying scilpy/io/deprecator.py -> build/lib.linux-armv7l-cpython-39/scilpy/io 2024-04-23T22:40:00,745 copying scilpy/io/streamlines.py -> build/lib.linux-armv7l-cpython-39/scilpy/io 2024-04-23T22:40:00,747 copying scilpy/io/utils.py -> build/lib.linux-armv7l-cpython-39/scilpy/io 2024-04-23T22:40:00,750 copying scilpy/io/dvc.py -> build/lib.linux-armv7l-cpython-39/scilpy/io 2024-04-23T22:40:00,752 copying scilpy/io/tensor.py -> build/lib.linux-armv7l-cpython-39/scilpy/io 2024-04-23T22:40:00,754 copying scilpy/io/gradients.py -> build/lib.linux-armv7l-cpython-39/scilpy/io 2024-04-23T22:40:00,755 copying scilpy/io/varian_fdf.py -> build/lib.linux-armv7l-cpython-39/scilpy/io 2024-04-23T22:40:00,758 copying scilpy/io/hdf5.py -> build/lib.linux-armv7l-cpython-39/scilpy/io 2024-04-23T22:40:00,761 creating build/lib.linux-armv7l-cpython-39/scilpy/utils 2024-04-23T22:40:00,761 copying scilpy/utils/spatial.py -> build/lib.linux-armv7l-cpython-39/scilpy/utils 2024-04-23T22:40:00,764 copying scilpy/utils/metrics_tools.py -> build/lib.linux-armv7l-cpython-39/scilpy/utils 2024-04-23T22:40:00,766 copying scilpy/utils/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/utils 2024-04-23T22:40:00,768 copying scilpy/utils/filenames.py -> build/lib.linux-armv7l-cpython-39/scilpy/utils 2024-04-23T22:40:00,770 creating build/lib.linux-armv7l-cpython-39/scilpy/tractograms 2024-04-23T22:40:00,771 copying scilpy/tractograms/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractograms 2024-04-23T22:40:00,773 copying scilpy/tractograms/tractogram_operations.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractograms 2024-04-23T22:40:00,776 copying scilpy/tractograms/streamline_operations.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractograms 2024-04-23T22:40:00,778 copying scilpy/tractograms/streamline_and_mask_operations.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractograms 2024-04-23T22:40:00,781 copying scilpy/tractograms/lazy_tractogram_operations.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractograms 2024-04-23T22:40:00,782 copying scilpy/tractograms/dps_and_dpp_management.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractograms 2024-04-23T22:40:00,786 creating build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis 2024-04-23T22:40:00,786 copying scilpy/tractanalysis/bundle_operations.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis 2024-04-23T22:40:00,789 copying scilpy/tractanalysis/afd_along_streamlines.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis 2024-04-23T22:40:00,791 copying scilpy/tractanalysis/json_utils.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis 2024-04-23T22:40:00,792 copying scilpy/tractanalysis/bingham_metric_along_streamlines.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis 2024-04-23T22:40:00,794 copying scilpy/tractanalysis/reproducibility_measures.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis 2024-04-23T22:40:00,797 copying scilpy/tractanalysis/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis 2024-04-23T22:40:00,798 copying scilpy/tractanalysis/distance_to_centroid.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis 2024-04-23T22:40:00,800 copying scilpy/tractanalysis/tools.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis 2024-04-23T22:40:00,802 copying scilpy/tractanalysis/scoring.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis 2024-04-23T22:40:00,804 copying scilpy/tractanalysis/todi_util.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis 2024-04-23T22:40:00,806 copying scilpy/tractanalysis/todi.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis 2024-04-23T22:40:00,809 creating build/lib.linux-armv7l-cpython-39/scilpy/tracking 2024-04-23T22:40:00,810 copying scilpy/tracking/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/tracking 2024-04-23T22:40:00,811 copying scilpy/tracking/seed.py -> build/lib.linux-armv7l-cpython-39/scilpy/tracking 2024-04-23T22:40:00,814 copying scilpy/tracking/utils.py -> build/lib.linux-armv7l-cpython-39/scilpy/tracking 2024-04-23T22:40:00,816 copying scilpy/tracking/propagator.py -> build/lib.linux-armv7l-cpython-39/scilpy/tracking 2024-04-23T22:40:00,819 copying scilpy/tracking/tracker.py -> build/lib.linux-armv7l-cpython-39/scilpy/tracking 2024-04-23T22:40:00,822 creating build/lib.linux-armv7l-cpython-39/scilpy/denoise 2024-04-23T22:40:00,823 copying scilpy/denoise/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/denoise 2024-04-23T22:40:00,824 copying scilpy/denoise/asym_filtering.py -> build/lib.linux-armv7l-cpython-39/scilpy/denoise 2024-04-23T22:40:00,828 creating build/lib.linux-armv7l-cpython-39/scilpy/dwi 2024-04-23T22:40:00,828 copying scilpy/dwi/operations.py -> build/lib.linux-armv7l-cpython-39/scilpy/dwi 2024-04-23T22:40:00,831 copying scilpy/dwi/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/dwi 2024-04-23T22:40:00,832 copying scilpy/dwi/utils.py -> build/lib.linux-armv7l-cpython-39/scilpy/dwi 2024-04-23T22:40:00,835 creating build/lib.linux-armv7l-cpython-39/scilpy/gpuparallel 2024-04-23T22:40:00,836 copying scilpy/gpuparallel/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/gpuparallel 2024-04-23T22:40:00,838 copying scilpy/gpuparallel/opencl_utils.py -> build/lib.linux-armv7l-cpython-39/scilpy/gpuparallel 2024-04-23T22:40:00,840 creating build/lib.linux-armv7l-cpython-39/scilpy/image/tests 2024-04-23T22:40:00,841 copying scilpy/image/tests/test_volume_operations.py -> build/lib.linux-armv7l-cpython-39/scilpy/image/tests 2024-04-23T22:40:00,844 copying scilpy/image/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/image/tests 2024-04-23T22:40:00,845 copying scilpy/image/tests/test_labels.py -> build/lib.linux-armv7l-cpython-39/scilpy/image/tests 2024-04-23T22:40:00,847 copying scilpy/image/tests/test_volume_math.py -> build/lib.linux-armv7l-cpython-39/scilpy/image/tests 2024-04-23T22:40:00,850 creating build/lib.linux-armv7l-cpython-39/scilpy/viz/backends 2024-04-23T22:40:00,851 copying scilpy/viz/backends/vtk.py -> build/lib.linux-armv7l-cpython-39/scilpy/viz/backends 2024-04-23T22:40:00,853 copying scilpy/viz/backends/fury.py -> build/lib.linux-armv7l-cpython-39/scilpy/viz/backends 2024-04-23T22:40:00,855 copying scilpy/viz/backends/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/viz/backends 2024-04-23T22:40:00,857 copying scilpy/viz/backends/pil.py -> build/lib.linux-armv7l-cpython-39/scilpy/viz/backends 2024-04-23T22:40:00,859 creating build/lib.linux-armv7l-cpython-39/scilpy/viz/legacy 2024-04-23T22:40:00,860 copying scilpy/viz/legacy/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/viz/legacy 2024-04-23T22:40:00,862 copying scilpy/viz/legacy/chord_chart.py -> build/lib.linux-armv7l-cpython-39/scilpy/viz/legacy 2024-04-23T22:40:00,865 creating build/lib.linux-armv7l-cpython-39/scilpy/tractograms/tests 2024-04-23T22:40:00,866 copying scilpy/tractograms/tests/test_tractogram_operations.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractograms/tests 2024-04-23T22:40:00,868 copying scilpy/tractograms/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractograms/tests 2024-04-23T22:40:00,869 copying scilpy/tractograms/tests/test_streamline_and_mask_operations.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractograms/tests 2024-04-23T22:40:00,871 copying scilpy/tractograms/tests/test_dps_and_dpp_management.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractograms/tests 2024-04-23T22:40:00,873 copying scilpy/tractograms/tests/test_streamline_operations.py -> build/lib.linux-armv7l-cpython-39/scilpy/tractograms/tests 2024-04-23T22:40:00,876 creating build/lib.linux-armv7l-cpython-39/scilpy/dwi/tests 2024-04-23T22:40:00,877 copying scilpy/dwi/tests/test_operations.py -> build/lib.linux-armv7l-cpython-39/scilpy/dwi/tests 2024-04-23T22:40:00,879 copying scilpy/dwi/tests/__init__.py -> build/lib.linux-armv7l-cpython-39/scilpy/dwi/tests 2024-04-23T22:40:00,880 copying scilpy/dwi/tests/test_utils.py -> build/lib.linux-armv7l-cpython-39/scilpy/dwi/tests 2024-04-23T22:40:00,882 running egg_info 2024-04-23T22:40:00,953 writing scilpy.egg-info/PKG-INFO 2024-04-23T22:40:00,958 writing dependency_links to scilpy.egg-info/dependency_links.txt 2024-04-23T22:40:00,975 writing entry points to scilpy.egg-info/entry_points.txt 2024-04-23T22:40:00,979 writing requirements to scilpy.egg-info/requires.txt 2024-04-23T22:40:00,980 writing top-level names to scilpy.egg-info/top_level.txt 2024-04-23T22:40:01,156 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-04-23T22:40:01,164 reading manifest file 'scilpy.egg-info/SOURCES.txt' 2024-04-23T22:40:01,181 reading manifest template 'MANIFEST.in' 2024-04-23T22:40:01,228 warning: no files found matching '*.c' under directory 'scilpy' 2024-04-23T22:40:01,272 warning: no files found matching '*.cpp' under directory 'scilpy' 2024-04-23T22:40:01,318 adding license file 'LICENSE' 2024-04-23T22:40:01,350 writing manifest file 'scilpy.egg-info/SOURCES.txt' 2024-04-23T22:40:01,375 copying scilpy/tractograms/uncompress.pyx -> build/lib.linux-armv7l-cpython-39/scilpy/tractograms 2024-04-23T22:40:01,378 copying scilpy/tractanalysis/grid_intersections.pyx -> build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis 2024-04-23T22:40:01,380 copying scilpy/tractanalysis/quick_tools.pyx -> build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis 2024-04-23T22:40:01,382 copying scilpy/tractanalysis/streamlines_metrics.pyx -> build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis 2024-04-23T22:40:01,420 running build_ext 2024-04-23T22:40:02,360 Compiling scilpy/tractograms/uncompress.pyx because it changed. 2024-04-23T22:40:02,360 Compiling scilpy/tractanalysis/quick_tools.pyx because it changed. 2024-04-23T22:40:02,360 Compiling scilpy/tractanalysis/grid_intersections.pyx because it changed. 2024-04-23T22:40:02,361 Compiling scilpy/tractanalysis/streamlines_metrics.pyx because it changed. 2024-04-23T22:40:02,361 [1/4] Cythonizing scilpy/tractanalysis/grid_intersections.pyx 2024-04-23T22:40:03,123 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-wgdj5l0x/scilpy_36250047719b4585af010ed9b5113934/scilpy/tractanalysis/grid_intersections.pyx 2024-04-23T22:40:03,123 tree = Parsing.p_module(s, pxd, full_module_name) 2024-04-23T22:40:03,880 performance hint: scilpy/tractanalysis/grid_intersections.pyx:89:5: Exception check on 'c_get_closest_edge' will always require the GIL to be acquired. 2024-04-23T22:40:03,881 Possible solutions: 2024-04-23T22:40:03,881 1. Declare 'c_get_closest_edge' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-04-23T22:40:03,881 2. Use an 'int' return type on 'c_get_closest_edge' to allow an error code to be returned. 2024-04-23T22:40:03,881 performance hint: scilpy/tractanalysis/grid_intersections.pyx:100:5: Exception check on 'copypoint_f' will always require the GIL to be acquired. 2024-04-23T22:40:03,881 Possible solutions: 2024-04-23T22:40:03,881 1. Declare 'copypoint_f' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-04-23T22:40:03,881 2. Use an 'int' return type on 'copypoint_f' to allow an error code to be returned. 2024-04-23T22:40:03,882 performance hint: scilpy/tractanalysis/grid_intersections.pyx:107:5: Exception check on 'copypoint_d' will always require the GIL to be acquired. 2024-04-23T22:40:03,882 Possible solutions: 2024-04-23T22:40:03,882 1. Declare 'copypoint_d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-04-23T22:40:03,882 2. Use an 'int' return type on 'copypoint_d' to allow an error code to be returned. 2024-04-23T22:40:03,882 performance hint: scilpy/tractanalysis/grid_intersections.pyx:114:5: Exception check on 'copypoint_f2d' will always require the GIL to be acquired. 2024-04-23T22:40:03,882 Possible solutions: 2024-04-23T22:40:03,882 1. Declare 'copypoint_f2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-04-23T22:40:03,882 2. Use an 'int' return type on 'copypoint_f2d' to allow an error code to be returned. 2024-04-23T22:40:03,883 performance hint: scilpy/tractanalysis/grid_intersections.pyx:121:5: Exception check on 'copypoint_d2f' will always require the GIL to be acquired. 2024-04-23T22:40:03,883 Possible solutions: 2024-04-23T22:40:03,883 1. Declare 'copypoint_d2f' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-04-23T22:40:03,883 2. Use an 'int' return type on 'copypoint_d2f' to allow an error code to be returned. 2024-04-23T22:40:04,424 warning: scilpy/tractanalysis/grid_intersections.pyx:270:61: the result of using negative indices inside of code sections marked as 'wraparound=False' is undefined 2024-04-23T22:40:04,425 warning: scilpy/tractanalysis/grid_intersections.pyx:271:61: the result of using negative indices inside of code sections marked as 'wraparound=False' is undefined 2024-04-23T22:40:04,425 warning: scilpy/tractanalysis/grid_intersections.pyx:272:61: the result of using negative indices inside of code sections marked as 'wraparound=False' is undefined 2024-04-23T22:40:04,428 warning: scilpy/tractanalysis/grid_intersections.pyx:297:38: the result of using negative indices inside of code sections marked as 'wraparound=False' is undefined 2024-04-23T22:40:04,428 warning: scilpy/tractanalysis/grid_intersections.pyx:297:65: the result of using negative indices inside of code sections marked as 'wraparound=False' is undefined 2024-04-23T22:40:05,759 performance hint: scilpy/tractanalysis/grid_intersections.pyx:162:19: Exception check after calling 'copypoint_f' will always require the GIL to be acquired. 2024-04-23T22:40:05,759 Possible solutions: 2024-04-23T22:40:05,760 1. Declare 'copypoint_f' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-04-23T22:40:05,760 2. Use an 'int' return type on 'copypoint_f' to allow an error code to be returned. 2024-04-23T22:40:05,761 performance hint: scilpy/tractanalysis/grid_intersections.pyx:179:27: Exception check after calling 'copypoint_d' will always require the GIL to be acquired. 2024-04-23T22:40:05,761 Possible solutions: 2024-04-23T22:40:05,762 1. Declare 'copypoint_d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-04-23T22:40:05,762 2. Use an 'int' return type on 'copypoint_d' to allow an error code to be returned. 2024-04-23T22:40:05,762 performance hint: scilpy/tractanalysis/grid_intersections.pyx:180:27: Exception check after calling 'copypoint_d' will always require the GIL to be acquired. 2024-04-23T22:40:05,762 Possible solutions: 2024-04-23T22:40:05,762 1. Declare 'copypoint_d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-04-23T22:40:05,762 2. Use an 'int' return type on 'copypoint_d' to allow an error code to be returned. 2024-04-23T22:40:05,762 performance hint: scilpy/tractanalysis/grid_intersections.pyx:185:29: Exception check after calling 'copypoint_f2d' will always require the GIL to be acquired. 2024-04-23T22:40:05,763 Possible solutions: 2024-04-23T22:40:05,763 1. Declare 'copypoint_f2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-04-23T22:40:05,763 2. Use an 'int' return type on 'copypoint_f2d' to allow an error code to be returned. 2024-04-23T22:40:05,763 performance hint: scilpy/tractanalysis/grid_intersections.pyx:186:27: Exception check after calling 'copypoint_d' will always require the GIL to be acquired. 2024-04-23T22:40:05,763 Possible solutions: 2024-04-23T22:40:05,763 1. Declare 'copypoint_d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-04-23T22:40:05,763 2. Use an 'int' return type on 'copypoint_d' to allow an error code to be returned. 2024-04-23T22:40:05,763 performance hint: scilpy/tractanalysis/grid_intersections.pyx:190:25: Exception check after calling 'copypoint_f2d' will always require the GIL to be acquired. 2024-04-23T22:40:05,764 Possible solutions: 2024-04-23T22:40:05,764 1. Declare 'copypoint_f2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-04-23T22:40:05,764 2. Use an 'int' return type on 'copypoint_f2d' to allow an error code to be returned. 2024-04-23T22:40:05,767 performance hint: scilpy/tractanalysis/grid_intersections.pyx:217:27: Exception check after calling 'copypoint_d' will always require the GIL to be acquired. 2024-04-23T22:40:05,768 Possible solutions: 2024-04-23T22:40:05,768 1. Declare 'copypoint_d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-04-23T22:40:05,768 2. Use an 'int' return type on 'copypoint_d' to allow an error code to be returned. 2024-04-23T22:40:05,769 performance hint: scilpy/tractanalysis/grid_intersections.pyx:235:34: Exception check after calling 'c_get_closest_edge' will always require the GIL to be acquired. 2024-04-23T22:40:05,769 Possible solutions: 2024-04-23T22:40:05,769 1. Declare 'c_get_closest_edge' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-04-23T22:40:05,770 2. Use an 'int' return type on 'c_get_closest_edge' to allow an error code to be returned. 2024-04-23T22:40:05,771 performance hint: scilpy/tractanalysis/grid_intersections.pyx:254:33: Exception check after calling 'copypoint_d2f' will always require the GIL to be acquired. 2024-04-23T22:40:05,771 Possible solutions: 2024-04-23T22:40:05,771 1. Declare 'copypoint_d2f' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-04-23T22:40:05,771 2. Use an 'int' return type on 'copypoint_d2f' to allow an error code to be returned. 2024-04-23T22:40:05,773 performance hint: scilpy/tractanalysis/grid_intersections.pyx:273:33: Exception check after calling 'copypoint_d2f' will always require the GIL to be acquired. 2024-04-23T22:40:05,774 Possible solutions: 2024-04-23T22:40:05,774 1. Declare 'copypoint_d2f' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-04-23T22:40:05,774 2. Use an 'int' return type on 'copypoint_d2f' to allow an error code to be returned. 2024-04-23T22:40:05,962 [2/4] Cythonizing scilpy/tractanalysis/quick_tools.pyx 2024-04-23T22:40:05,977 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-wgdj5l0x/scilpy_36250047719b4585af010ed9b5113934/scilpy/tractanalysis/quick_tools.pyx 2024-04-23T22:40:05,977 tree = Parsing.p_module(s, pxd, full_module_name) 2024-04-23T22:40:08,263 [3/4] Cythonizing scilpy/tractanalysis/streamlines_metrics.pyx 2024-04-23T22:40:08,278 /usr/local/lib/python3.9/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /tmp/pip-wheel-wgdj5l0x/scilpy_36250047719b4585af010ed9b5113934/scilpy/tractanalysis/streamlines_metrics.pyx 2024-04-23T22:40:08,278 tree = Parsing.p_module(s, pxd, full_module_name) 2024-04-23T22:40:09,508 performance hint: scilpy/tractanalysis/streamlines_metrics.pyx:26:5: Exception check on 'c_get_closest_edge' will always require the GIL to be acquired. 2024-04-23T22:40:09,508 Possible solutions: 2024-04-23T22:40:09,508 1. Declare 'c_get_closest_edge' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-04-23T22:40:09,508 2. Use an 'int' return type on 'c_get_closest_edge' to allow an error code to be returned. 2024-04-23T22:40:11,087 [4/4] Cythonizing scilpy/tractograms/uncompress.pyx 2024-04-23T22:40:11,730 performance hint: scilpy/tractograms/uncompress.pyx:141:5: Exception check on 'c_get_closest_edge' will always require the GIL to be acquired. 2024-04-23T22:40:11,730 Possible solutions: 2024-04-23T22:40:11,730 1. Declare 'c_get_closest_edge' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-04-23T22:40:11,730 2. Use an 'int' return type on 'c_get_closest_edge' to allow an error code to be returned. 2024-04-23T22:40:12,468 warning: scilpy/tractograms/uncompress.pyx:192:47: the result of using negative indices inside of code sections marked as 'wraparound=False' is undefined 2024-04-23T22:40:12,469 warning: scilpy/tractograms/uncompress.pyx:192:74: the result of using negative indices inside of code sections marked as 'wraparound=False' is undefined 2024-04-23T22:40:12,489 warning: scilpy/tractograms/uncompress.pyx:357:38: the result of using negative indices inside of code sections marked as 'wraparound=False' is undefined 2024-04-23T22:40:12,489 warning: scilpy/tractograms/uncompress.pyx:357:65: the result of using negative indices inside of code sections marked as 'wraparound=False' is undefined 2024-04-23T22:40:12,490 warning: scilpy/tractograms/uncompress.pyx:359:42: the result of using negative indices inside of code sections marked as 'wraparound=False' is undefined 2024-04-23T22:40:12,491 warning: scilpy/tractograms/uncompress.pyx:359:73: the result of using negative indices inside of code sections marked as 'wraparound=False' is undefined 2024-04-23T22:40:13,661 performance hint: scilpy/tractograms/uncompress.pyx:282:34: Exception check after calling 'c_get_closest_edge' will always require the GIL to be acquired. 2024-04-23T22:40:13,662 Possible solutions: 2024-04-23T22:40:13,662 1. Declare 'c_get_closest_edge' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2024-04-23T22:40:13,662 2. Use an 'int' return type on 'c_get_closest_edge' to allow an error code to be returned. 2024-04-23T22:40:13,798 building 'scilpy.tractograms.uncompress' extension 2024-04-23T22:40:13,799 creating build/temp.linux-armv7l-cpython-39 2024-04-23T22:40:13,799 creating build/temp.linux-armv7l-cpython-39/scilpy 2024-04-23T22:40:13,800 creating build/temp.linux-armv7l-cpython-39/scilpy/tractograms 2024-04-23T22:40:13,802 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c scilpy/tractograms/uncompress.c -o build/temp.linux-armv7l-cpython-39/scilpy/tractograms/uncompress.o 2024-04-23T22:40:14,154 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929, 2024-04-23T22:40:14,154 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2024-04-23T22:40:14,154 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2024-04-23T22:40:14,155 from scilpy/tractograms/uncompress.c:1211: 2024-04-23T22:40:14,155 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-04-23T22:40:14,155 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-04-23T22:40:14,155 | ^~~~~~~ 2024-04-23T22:40:35,379 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/scilpy/tractograms/uncompress.o -L/usr/lib -L/usr/lib -o build/lib.linux-armv7l-cpython-39/scilpy/tractograms/uncompress.cpython-39-arm-linux-gnueabihf.so 2024-04-23T22:40:35,552 building 'scilpy.tractanalysis.quick_tools' extension 2024-04-23T22:40:35,553 creating build/temp.linux-armv7l-cpython-39/scilpy/tractanalysis 2024-04-23T22:40:35,554 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c scilpy/tractanalysis/quick_tools.c -o build/temp.linux-armv7l-cpython-39/scilpy/tractanalysis/quick_tools.o 2024-04-23T22:40:35,884 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929, 2024-04-23T22:40:35,885 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2024-04-23T22:40:35,885 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2024-04-23T22:40:35,885 from scilpy/tractanalysis/quick_tools.c:1210: 2024-04-23T22:40:35,885 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-04-23T22:40:35,885 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-04-23T22:40:35,885 | ^~~~~~~ 2024-04-23T22:40:53,886 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/scilpy/tractanalysis/quick_tools.o -L/usr/lib -L/usr/lib -o build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/quick_tools.cpython-39-arm-linux-gnueabihf.so 2024-04-23T22:40:54,053 building 'scilpy.tractanalysis.grid_intersections' extension 2024-04-23T22:40:54,054 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c scilpy/tractanalysis/grid_intersections.c -o build/temp.linux-armv7l-cpython-39/scilpy/tractanalysis/grid_intersections.o 2024-04-23T22:40:54,406 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929, 2024-04-23T22:40:54,406 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2024-04-23T22:40:54,407 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2024-04-23T22:40:54,407 from scilpy/tractanalysis/grid_intersections.c:1211: 2024-04-23T22:40:54,407 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-04-23T22:40:54,407 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-04-23T22:40:54,408 | ^~~~~~~ 2024-04-23T22:41:15,071 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/scilpy/tractanalysis/grid_intersections.o -L/usr/lib -L/usr/lib -o build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/grid_intersections.cpython-39-arm-linux-gnueabihf.so 2024-04-23T22:41:15,241 building 'scilpy.tractanalysis.streamlines_metrics' extension 2024-04-23T22:41:15,242 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -fPIC -I/usr/local/lib/python3.9/dist-packages/numpy/core/include -I/usr/include/python3.9 -c scilpy/tractanalysis/streamlines_metrics.c -o build/temp.linux-armv7l-cpython-39/scilpy/tractanalysis/streamlines_metrics.o 2024-04-23T22:41:15,580 In file included from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929, 2024-04-23T22:41:15,580 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, 2024-04-23T22:41:15,580 from /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/arrayobject.h:5, 2024-04-23T22:41:15,580 from scilpy/tractanalysis/streamlines_metrics.c:1210: 2024-04-23T22:41:15,581 /usr/local/lib/python3.9/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 2024-04-23T22:41:15,581 17 | #warning "Using deprecated NumPy API, disable it with " \ 2024-04-23T22:41:15,581 | ^~~~~~~ 2024-04-23T22:41:37,677 arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 build/temp.linux-armv7l-cpython-39/scilpy/tractanalysis/streamlines_metrics.o -L/usr/lib -L/usr/lib -o build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/streamlines_metrics.cpython-39-arm-linux-gnueabihf.so 2024-04-23T22:41:37,893 /usr/local/lib/python3.9/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-04-23T22:41:37,894 !! 2024-04-23T22:41:37,894 ******************************************************************************** 2024-04-23T22:41:37,894 Please avoid running ``setup.py`` directly. 2024-04-23T22:41:37,894 Instead, use pypa/build, pypa/installer or other 2024-04-23T22:41:37,895 standards-based tools. 2024-04-23T22:41:37,895 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-04-23T22:41:37,895 ******************************************************************************** 2024-04-23T22:41:37,895 !! 2024-04-23T22:41:37,895 self.initialize_options() 2024-04-23T22:41:37,930 installing to build/bdist.linux-armv7l/wheel 2024-04-23T22:41:37,930 running install 2024-04-23T22:41:37,955 running install_lib 2024-04-23T22:41:37,991 creating build/bdist.linux-armv7l 2024-04-23T22:41:37,992 creating build/bdist.linux-armv7l/wheel 2024-04-23T22:41:37,996 creating build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:37,998 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_commit.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,000 copying build/lib.linux-armv7l-cpython-39/scripts/scil_lesions_info.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,003 copying build/lib.linux-armv7l-cpython-39/scripts/scil_viz_tractogram_seeds_3d.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,005 copying build/lib.linux-armv7l-cpython-39/scripts/scil_sh_to_sf.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,007 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_filter_by_anatomy.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,010 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_shuffle.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,011 copying build/lib.linux-armv7l-cpython-39/scripts/scil_connectivity_math.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,014 copying build/lib.linux-armv7l-cpython-39/scripts/scil_volume_count_non_zero_voxels.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,016 copying build/lib.linux-armv7l-cpython-39/scripts/scil_volume_stats_in_labels.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,018 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_compute_centroid.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,019 copying build/lib.linux-armv7l-cpython-39/scripts/scil_viz_tractogram_seeds.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,021 copying build/lib.linux-armv7l-cpython-39/scripts/scil_frf_ssst.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,023 copying build/lib.linux-armv7l-cpython-39/scripts/scil_rgb_convert.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,025 copying build/lib.linux-armv7l-cpython-39/scripts/scil_surface_flip.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,027 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_extract_ushape.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,029 copying build/lib.linux-armv7l-cpython-39/scripts/scil_surface_convert.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,031 copying build/lib.linux-armv7l-cpython-39/scripts/scil_gradients_modify_axes.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,034 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_diameter.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,036 copying build/lib.linux-armv7l-cpython-39/scripts/scil_connectivity_compute_pca.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,038 copying build/lib.linux-armv7l-cpython-39/scripts/scil_gradients_validate_correct_eddy.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,043 creating build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,044 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_assign_uniform_color.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,046 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_json_convert_entries_to_xlsx.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,048 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_score_many_bundles_one_tractogram.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,050 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_split.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,052 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_volume_stats_in_labels.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,053 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_dwi_reorder_philips.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,055 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_freewater_maps.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,057 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_viz_fodf.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,059 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_viz_connectivity.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,061 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_labels_dilate.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,062 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_mti_maps_MT.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,065 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_dwi_compute_snr.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,067 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_header_validate_compatibility.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,068 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_stats_group_comparison.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,070 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_connectivity_print_filenames.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,072 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_freewater_priors.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,074 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_volume_crop.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,075 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_labels_split_volume_from_lut.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,077 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_convert.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,079 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_fodf_max_in_ventricles.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,081 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_dpp_math.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,083 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_volume_reshape_to_reference.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,084 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_qbx.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,086 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_frf_msmt.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,088 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_viz_volume_screenshot.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,090 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_filter_by_roi.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,092 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_segment_one_bundles.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,094 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_filter_by_anatomy.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,095 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_math.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,098 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_register.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,100 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_segment_bundles_for_connectivity.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,101 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_flip.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,103 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_resample.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,105 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_filter_by_orientation.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,107 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_connectivity_filter.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,109 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_volume_per_label.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,111 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_connectivity_pairwise_agreement.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,112 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_dwi_extract_b0.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,114 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tracking_pft_maps_edit.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,116 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_viz_gradients_screenshot.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,118 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_apply_transform.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,120 copying build/lib.linux-armv7l-cpython-39/scripts/tests/__init__.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,121 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tracking_local.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,123 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_viz_tractogram_seeds.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,125 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_volume_b0_synthesis.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,127 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_pairwise_comparison.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,129 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_segment_and_score.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,131 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_frf_mean.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,132 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_compute_TODI.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,134 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_aodf_metrics.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,136 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tracking_local_dev.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,138 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_viz_volume_histogram.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,140 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_dwi_extract_shell.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,142 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_print_info.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,144 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_assign_custom_color.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,146 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bingham_metrics.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,147 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_viz_bundle_screenshot_mosaic.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,149 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_filter_by_occurence.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,151 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_gradients_validate_correct_eddy.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,153 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_resample_nb_points.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,155 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_compute_density_map.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,157 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_project_streamlines_to_map.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,159 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_mti_adjust_B1_header.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,161 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_viz_volume_screenshot_mosaic.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,163 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_search_keywords.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,164 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_cut_streamlines.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,166 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_generate_priors.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,168 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_volume_resample.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,170 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_detect_loops.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,172 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_dwi_to_sh.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,174 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_header_print_info.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,175 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_fodf_to_bingham.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,177 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_viz_volume_scatterplot.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,179 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_clean_qbx_clusters.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,181 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_dwi_powder_average.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,183 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_viz_tractogram_seeds_3d.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,184 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_json_harmonize_entries.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,186 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_dwi_convert_FDF.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,188 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_labels_remove.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,189 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_sh_fusion.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,191 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_dti_convert_tensors.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,193 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_connectivity_normalize.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,195 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_viz_dti_screenshot.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,196 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_uniformize_endpoints.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,198 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_commit.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,200 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_labels_split_volume_by_ids.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,201 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_labels_combine.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,203 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_volume_count_non_zero_voxels.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,205 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_mean_fixel_bingham_metric.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,207 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_label_map.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,209 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_surface_convert.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,211 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_fodf_metrics.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,213 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_dti_metrics.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,214 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_NODDI_priors.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,216 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_filter_by_length.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,218 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tracking_pft_maps.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,220 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_dwi_apply_bias_field.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,221 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_mti_maps_ihMT.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,224 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_diameter.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,225 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_connectivity_math.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,227 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_surface_smooth.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,229 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_shape_measures.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,231 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_fodf_msmt.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,232 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_frf_set_diffusivities.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,234 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_shuffle.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,236 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_connectivity_graph_measures.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,238 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_volume_flip.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,239 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tracking_pft.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,241 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_sh_to_rish.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,243 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_compress.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,244 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_fodf_memsmt.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,246 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_smooth.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,248 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_gradients_apply_transform.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,250 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_gradients_modify_axes.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,252 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_mean_fixel_afd_from_hdf5.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,253 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_connectivity_compute_pca.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,255 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_connectivity_compare_populations.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,257 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_count_streamlines.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,259 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_connectivity_reorder_rois.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,260 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_volume_stats_in_ROI.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,262 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_fodf_ssst.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,264 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_score_same_bundle_many_segmentations.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,266 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_gradients_round_bvals.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,267 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_apply_transform_to_hdf5.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,269 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_plot_stats_per_point.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,271 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_sh_convert.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,273 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_qball_metrics.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,274 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_mean_std.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,276 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_surface_flip.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,278 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_convert_hdf5_to_trk.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,280 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_connectivity_compute_matrices.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,281 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_fix_trk.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,283 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_surface_apply_transform.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,284 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_frf_memsmt.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,287 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_connectivity_hdf5_average_density_map.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,288 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_segment_bundles.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,290 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_mean_fixel_afd.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,292 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_remove_invalid.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,294 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_compute_centroid.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,295 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_dki_metrics.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,297 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_lesions_info.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,299 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_compute_endpoints_map.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,300 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_viz_bundle.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,302 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_sh_to_aodf.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,304 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_dwi_prepare_eddy_command.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,306 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_json_merge_entries.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,308 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_extract_ushape.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,310 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_volume_math.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,312 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_dwi_concatenate.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,314 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_gradients_generate_sampling.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,315 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_gradients_convert.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,317 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_volume_apply_transform.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,319 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_volume_remove_outliers_ransac.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,321 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_project_map_to_streamlines.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,322 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_NODDI_maps.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,324 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_denoising_nlmeans.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,326 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_sh_to_sf.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,328 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_pairwise_comparison.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,330 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_dwi_split_by_indices.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,332 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_viz_bingham_fit.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,334 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_tractogram_seed_density_map.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,335 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_frf_ssst.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,337 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_dwi_prepare_topup_command.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,339 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bids_validate.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,341 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_viz_bundle_screenshot_mni.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,343 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_bundle_reject_outliers.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,345 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_rgb_convert.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,346 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_gradients_validate_correct.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,348 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_dwi_detect_volume_outliers.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,350 copying build/lib.linux-armv7l-cpython-39/scripts/tests/test_btensor_metrics.py -> build/bdist.linux-armv7l/wheel/scripts/tests 2024-04-23T22:41:38,352 copying build/lib.linux-armv7l-cpython-39/scripts/scil_NODDI_maps.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,354 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_segment_and_score.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,356 copying build/lib.linux-armv7l-cpython-39/scripts/scil_connectivity_compute_matrices.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,359 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_compute_TODI.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,361 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_flip.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,363 copying build/lib.linux-armv7l-cpython-39/scripts/scil_viz_gradients_screenshot.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,365 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_mean_std.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,367 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_score_many_bundles_one_tractogram.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,370 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_compute_density_map.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,371 copying build/lib.linux-armv7l-cpython-39/scripts/scil_json_convert_entries_to_xlsx.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,374 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_reject_outliers.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,376 copying build/lib.linux-armv7l-cpython-39/scripts/scil_NODDI_priors.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,378 copying build/lib.linux-armv7l-cpython-39/scripts/scil_connectivity_pairwise_agreement.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,380 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_resample_nb_points.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,381 copying build/lib.linux-armv7l-cpython-39/scripts/scil_volume_resample.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,383 copying build/lib.linux-armv7l-cpython-39/scripts/scil_dwi_to_sh.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,385 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_cut_streamlines.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,387 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_convert_hdf5_to_trk.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,389 copying build/lib.linux-armv7l-cpython-39/scripts/scil_fodf_memsmt.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,392 copying build/lib.linux-armv7l-cpython-39/scripts/scil_viz_bundle.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,394 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_register.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,396 copying build/lib.linux-armv7l-cpython-39/scripts/scil_volume_reshape_to_reference.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,398 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_qbx.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,399 copying build/lib.linux-armv7l-cpython-39/scripts/__init__.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,401 copying build/lib.linux-armv7l-cpython-39/scripts/scil_stats_group_comparison.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,403 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_mean_fixel_afd_from_hdf5.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,405 copying build/lib.linux-armv7l-cpython-39/scripts/scil_fodf_msmt.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,407 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_project_streamlines_to_map.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,410 copying build/lib.linux-armv7l-cpython-39/scripts/scil_labels_split_volume_from_lut.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,411 copying build/lib.linux-armv7l-cpython-39/scripts/scil_surface_smooth.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,413 copying build/lib.linux-armv7l-cpython-39/scripts/scil_connectivity_hdf5_average_density_map.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,415 copying build/lib.linux-armv7l-cpython-39/scripts/scil_sh_to_rish.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,417 copying build/lib.linux-armv7l-cpython-39/scripts/scil_dwi_detect_volume_outliers.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,419 copying build/lib.linux-armv7l-cpython-39/scripts/scil_dwi_split_by_indices.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,420 copying build/lib.linux-armv7l-cpython-39/scripts/scil_labels_combine.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,423 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_compute_endpoints_map.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,425 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_math.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,427 copying build/lib.linux-armv7l-cpython-39/scripts/scil_dwi_powder_average.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,429 copying build/lib.linux-armv7l-cpython-39/scripts/scil_connectivity_reorder_rois.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,431 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_remove_invalid.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,433 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_volume_per_label.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,435 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_fix_trk.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,437 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_resample.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,439 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_assign_custom_color.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,441 copying build/lib.linux-armv7l-cpython-39/scripts/scil_labels_dilate.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,443 copying build/lib.linux-armv7l-cpython-39/scripts/scil_viz_bingham_fit.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,445 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_label_map.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,448 copying build/lib.linux-armv7l-cpython-39/scripts/scil_viz_dti_screenshot.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,450 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bids_validate.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,452 copying build/lib.linux-armv7l-cpython-39/scripts/scil_sh_fusion.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,454 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tracking_local_dev.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,456 copying build/lib.linux-armv7l-cpython-39/scripts/scil_labels_remove.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,458 copying build/lib.linux-armv7l-cpython-39/scripts/scil_frf_msmt.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,460 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_convert.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,462 copying build/lib.linux-armv7l-cpython-39/scripts/scil_json_harmonize_entries.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,464 copying build/lib.linux-armv7l-cpython-39/scripts/scil_dki_metrics.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,466 copying build/lib.linux-armv7l-cpython-39/scripts/scil_dwi_prepare_topup_command.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,468 copying build/lib.linux-armv7l-cpython-39/scripts/scil_frf_set_diffusivities.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,470 copying build/lib.linux-armv7l-cpython-39/scripts/scil_viz_bundle_screenshot_mosaic.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,472 copying build/lib.linux-armv7l-cpython-39/scripts/scil_frf_mean.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,474 copying build/lib.linux-armv7l-cpython-39/scripts/scil_dwi_convert_FDF.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,476 copying build/lib.linux-armv7l-cpython-39/scripts/scil_dwi_reorder_philips.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,478 copying build/lib.linux-armv7l-cpython-39/scripts/scil_header_validate_compatibility.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,480 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bingham_metrics.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,482 copying build/lib.linux-armv7l-cpython-39/scripts/scil_sh_to_aodf.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,484 copying build/lib.linux-armv7l-cpython-39/scripts/scil_viz_bundle_screenshot_mni.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,487 copying build/lib.linux-armv7l-cpython-39/scripts/scil_fodf_metrics.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,489 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_pairwise_comparison.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,491 copying build/lib.linux-armv7l-cpython-39/scripts/scil_mti_adjust_B1_header.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,493 copying build/lib.linux-armv7l-cpython-39/scripts/scil_volume_apply_transform.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,495 copying build/lib.linux-armv7l-cpython-39/scripts/scil_search_keywords.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,497 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_count_streamlines.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,502 creating build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,503 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_assign_custom_color_to_tractogram.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,505 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_reshape_to_reference.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,507 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_bundle_mean_std_per_point.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,509 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_remove_labels.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,510 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_cut_streamlines.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,512 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_resample_bvals.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,514 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_filter_tractogram_anatomically.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,515 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_flip_streamlines.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,517 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_hdf5_average_density_map.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,519 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_mean_frf.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,521 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_flip_gradients.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,523 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_estimate_bundles_diameter.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,524 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_screenshot_dti.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,526 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_swap_gradient_axis.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,528 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_split_volume_by_labels.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,530 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_apply_transform_to_surface.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,531 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_extract_dwi_shell.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,533 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_combine_labels.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,534 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_resample_volume.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,536 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_memsmt_frf.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,538 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_sf_from_sh.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,539 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_evaluate_connectivity_graph_measures.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,541 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_resample_tractogram.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,543 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_project_streamlines_to_map.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,544 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_visualize_bingham_fit.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,546 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compress_streamlines.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,548 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_convert_tensors.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,550 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_prepare_eddy_command.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,551 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_evaluate_connectivity_pairwise_agreement_measures.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,553 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_visualize_seeds_3d.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,555 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_validate_bids.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,556 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_run_commit.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,558 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_detect_dwi_volume_outliers.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,560 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_apply_transform_to_bvecs.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,562 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_evaluate_bundles_pairwise_agreement_measures.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,563 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_fodf_metrics.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,565 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_msmt_frf.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,567 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_convert_gradients_mrtrix_to_fsl.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,569 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_register_tractogram.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,570 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_shuffle_streamlines.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,572 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_centroid.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,574 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_split_image.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,575 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_set_response_function.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,577 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_count_streamlines.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,579 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_snr_in_roi.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,581 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_plot_mean_std_per_point.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,582 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/__init__.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,584 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_smooth_surface.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,585 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_smooth_streamlines.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,587 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_endpoints_map.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,589 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_seed_by_labels.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,590 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_rish_from_sh.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,592 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_qball_metrics.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,594 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_metrics_stats_in_ROI.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,595 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_run_nlmeans.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,597 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_outlier_rejection.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,599 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_assign_uniform_color_to_tractograms.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,601 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_merge_sh.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,602 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_uniformize_streamlines_endpoints.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,604 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_ssst_fodf.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,606 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_visualize_scatterplot.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,608 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_filter_tractogram.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,609 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_visualize_fodf.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,611 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_freewater.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,613 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_qbx.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,615 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_todi.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,616 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_maps_for_particle_filter_tracking.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,618 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_evaluate_bundles_individual_measures.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,620 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_group_comparison.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,621 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_execute_asymmetric_filtering.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,623 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_save_connections_from_hdf5.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,625 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_memsmt_fodf.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,626 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_remove_invalid_streamlines.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,628 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_reorder_dwi_philips.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,630 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_score_tractogram.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,632 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_connectivity.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,634 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_recognize_multi_bundles.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,635 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_dti_metrics.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,637 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_filter_streamlines_by_length.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,639 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_msmt_fodf.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,640 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_normalize_connectivity.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,642 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_NODDI.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,644 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_visualize_bundles.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,646 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_remove_outliers_ransac.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,647 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_convert_fdf.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,649 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_print_connectivity_filenames.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,651 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_extract_ushape.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,652 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_local_tracking.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,654 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_concatenate_dwi.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,656 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_mean_fixel_afd_from_bundles.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,657 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_recognize_single_bundle.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,659 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compare_connectivity.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,661 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_fodf_max_in_ventricles.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,662 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_convert_rgb.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,664 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_streamlines_math.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,665 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_ssst_frf.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,667 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_generate_priors_from_bundle.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,669 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_sh_from_signal.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,670 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_bundle_mean_std.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,672 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_ihMT_maps.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,673 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_crop_volume.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,675 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_clean_qbx_clusters.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,677 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_perform_majority_vote.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,678 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_add_tracking_mask_to_pft_maps.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,680 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_fit_bingham_to_fodf.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,682 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_streamlines_density_map.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,683 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_execute_angle_aware_bilateral_filtering.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,685 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_generate_gradient_sampling.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,687 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_pft.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,688 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_apply_bias_field_on_dwi.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,690 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_reorder_connectivity.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,692 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_apply_transform_to_hdf5.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,693 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_convert_gradients_fsl_to_mrtrix.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,695 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_dilate_labels.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,697 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_MT_maps.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,699 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_NODDI_priors.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,700 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_fix_dsi_studio_trk.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,702 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_pca.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,703 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_split_tractogram.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,705 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_visualize_histogram.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,707 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_convert_sh_basis.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,708 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_flip_volume.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,710 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_detect_streamlines_loops.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,712 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_prepare_topup_command.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,713 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_merge_json.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,715 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_evaluate_bundles_binary_classification_measures.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,717 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_harmonize_json.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,718 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_visualize_gradients.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,720 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_flip_surface.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,721 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_asym_odf_metrics.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,723 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_print_header.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,725 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_screenshot_bundle.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,726 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_local_tracking_dev.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,728 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_validate_and_correct_bvecs.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,730 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_apply_transform_to_tractogram.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,731 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_bundle_volume_per_label.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,733 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_bundle_volume.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,735 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_seed_density_map.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,736 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_mean_fixel_afd_from_hdf5.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,738 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_image_math.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,740 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_lobe_specific_fodf_metrics.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,741 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_convert_tractogram.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,743 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_validate_and_correct_eddy_gradients.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,744 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_count_non_zero_voxels.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,746 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_split_volume_by_ids.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,748 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_streamlines_length_stats.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,749 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_screenshot_volume.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,751 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_apply_transform_to_image.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,753 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_resample_streamlines.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,754 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_divide.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,756 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_visualize_connectivity.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,757 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_bundle_voxel_label_map.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,759 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_decompose_connectivity.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,761 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_convert_surface.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,762 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_powder_average.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,764 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_visualize_bundles_mosaic.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,765 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_score_bundles.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,767 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_filter_streamlines_by_orientation.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,768 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_convert_json_to_xlsx.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,770 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_mean_fixel_lobe_metric_from_bundles.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,772 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_verify_space_attributes_compatibility.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,773 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_extract_b0.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,775 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_filter_connectivity.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,776 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_compute_kurtosis_metrics.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,778 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_visualize_seeds.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,780 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_analyse_lesions_load.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,781 copying build/lib.linux-armv7l-cpython-39/scripts/legacy/scil_screenshot_volume_mosaic_overlap.py -> build/bdist.linux-armv7l/wheel/scripts/legacy 2024-04-23T22:41:38,783 copying build/lib.linux-armv7l-cpython-39/scripts/scil_dwi_extract_shell.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,785 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_segment_one_bundle.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,787 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_apply_transform_to_hdf5.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,789 copying build/lib.linux-armv7l-cpython-39/scripts/scil_volume_math.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,791 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_mean_fixel_afd.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,793 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_compress.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,795 copying build/lib.linux-armv7l-cpython-39/scripts/scil_sh_convert.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,796 copying build/lib.linux-armv7l-cpython-39/scripts/scil_connectivity_graph_measures.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,798 copying build/lib.linux-armv7l-cpython-39/scripts/scil_header_print_info.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,800 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_uniformize_endpoints.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,802 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_filter_by_roi.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,804 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tracking_local.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,807 copying build/lib.linux-armv7l-cpython-39/scripts/scil_frf_memsmt.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,809 copying build/lib.linux-armv7l-cpython-39/scripts/scil_viz_connectivity.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,811 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_dpp_math.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,814 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_seed_density_map.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,815 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_detect_loops.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,818 copying build/lib.linux-armv7l-cpython-39/scripts/scil_btensor_metrics.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,820 copying build/lib.linux-armv7l-cpython-39/scripts/scil_dwi_apply_bias_field.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,822 copying build/lib.linux-armv7l-cpython-39/scripts/scil_gradients_round_bvals.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,823 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_segment_bundles_for_connectivity.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,826 copying build/lib.linux-armv7l-cpython-39/scripts/scil_fodf_ssst.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,828 copying build/lib.linux-armv7l-cpython-39/scripts/scil_dwi_extract_b0.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,830 copying build/lib.linux-armv7l-cpython-39/scripts/scil_gradients_apply_transform.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,832 copying build/lib.linux-armv7l-cpython-39/scripts/scil_connectivity_filter.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,834 copying build/lib.linux-armv7l-cpython-39/scripts/scil_dwi_compute_snr.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,836 copying build/lib.linux-armv7l-cpython-39/scripts/scil_gradients_convert.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,838 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tracking_pft_maps.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,840 copying build/lib.linux-armv7l-cpython-39/scripts/scil_gradients_validate_correct.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,842 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_apply_transform.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,844 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_shape_measures.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,846 copying build/lib.linux-armv7l-cpython-39/scripts/scil_connectivity_print_filenames.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,848 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_smooth.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,850 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_print_info.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,852 copying build/lib.linux-armv7l-cpython-39/scripts/scil_volume_b0_synthesis.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,854 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_project_map_to_streamlines.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,856 copying build/lib.linux-armv7l-cpython-39/scripts/scil_fodf_max_in_ventricles.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,858 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_filter_by_orientation.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,860 copying build/lib.linux-armv7l-cpython-39/scripts/scil_connectivity_compare_populations.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,862 copying build/lib.linux-armv7l-cpython-39/scripts/scil_denoising_nlmeans.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,864 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_filter_by_length.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,866 copying build/lib.linux-armv7l-cpython-39/scripts/scil_labels_split_volume_by_ids.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,868 copying build/lib.linux-armv7l-cpython-39/scripts/scil_surface_apply_transform.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,870 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_pairwise_comparison.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,872 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_generate_priors.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,875 copying build/lib.linux-armv7l-cpython-39/scripts/scil_viz_volume_screenshot_mosaic.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,877 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_score_same_bundle_many_segmentations.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,879 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_clean_qbx_clusters.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,882 copying build/lib.linux-armv7l-cpython-39/scripts/scil_volume_flip.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,884 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tracking_pft_maps_edit.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,885 copying build/lib.linux-armv7l-cpython-39/scripts/scil_dwi_concatenate.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,887 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_assign_uniform_color.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,889 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tracking_pft.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,892 copying build/lib.linux-armv7l-cpython-39/scripts/scil_volume_remove_outliers_ransac.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,894 copying build/lib.linux-armv7l-cpython-39/scripts/scil_freewater_priors.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,895 copying build/lib.linux-armv7l-cpython-39/scripts/scil_qball_metrics.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,898 copying build/lib.linux-armv7l-cpython-39/scripts/scil_gradients_generate_sampling.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,900 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_segment_bundles.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,902 copying build/lib.linux-armv7l-cpython-39/scripts/scil_dti_convert_tensors.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,904 copying build/lib.linux-armv7l-cpython-39/scripts/scil_volume_stats_in_ROI.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,906 copying build/lib.linux-armv7l-cpython-39/scripts/scil_fodf_to_bingham.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,909 copying build/lib.linux-armv7l-cpython-39/scripts/scil_viz_fodf.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,911 copying build/lib.linux-armv7l-cpython-39/scripts/scil_viz_volume_histogram.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,913 copying build/lib.linux-armv7l-cpython-39/scripts/scil_dti_metrics.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,916 copying build/lib.linux-armv7l-cpython-39/scripts/scil_viz_volume_scatterplot.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,918 copying build/lib.linux-armv7l-cpython-39/scripts/scil_freewater_maps.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,920 copying build/lib.linux-armv7l-cpython-39/scripts/scil_volume_crop.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,922 copying build/lib.linux-armv7l-cpython-39/scripts/scil_aodf_metrics.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,924 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_mean_fixel_bingham_metric.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,926 copying build/lib.linux-armv7l-cpython-39/scripts/scil_get_version.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,928 copying build/lib.linux-armv7l-cpython-39/scripts/scil_json_merge_entries.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,930 copying build/lib.linux-armv7l-cpython-39/scripts/scil_dwi_prepare_eddy_command.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,932 copying build/lib.linux-armv7l-cpython-39/scripts/scil_connectivity_normalize.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,934 copying build/lib.linux-armv7l-cpython-39/scripts/scil_mti_maps_MT.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,937 copying build/lib.linux-armv7l-cpython-39/scripts/scil_viz_volume_screenshot.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,939 copying build/lib.linux-armv7l-cpython-39/scripts/scil_plot_stats_per_point.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,941 copying build/lib.linux-armv7l-cpython-39/scripts/scil_mti_maps_ihMT.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,943 copying build/lib.linux-armv7l-cpython-39/scripts/scil_tractogram_split.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,945 copying build/lib.linux-armv7l-cpython-39/scripts/scil_bundle_filter_by_occurence.py -> build/bdist.linux-armv7l/wheel/scripts 2024-04-23T22:41:38,948 creating build/bdist.linux-armv7l/wheel/scilpy 2024-04-23T22:41:38,949 creating build/bdist.linux-armv7l/wheel/scilpy/segment 2024-04-23T22:41:38,950 copying build/lib.linux-armv7l-cpython-39/scilpy/segment/recobundlesx.py -> build/bdist.linux-armv7l/wheel/scilpy/segment 2024-04-23T22:41:38,953 copying build/lib.linux-armv7l-cpython-39/scilpy/segment/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/segment 2024-04-23T22:41:38,954 copying build/lib.linux-armv7l-cpython-39/scilpy/segment/voting_scheme.py -> build/bdist.linux-armv7l/wheel/scilpy/segment 2024-04-23T22:41:38,956 copying build/lib.linux-armv7l-cpython-39/scilpy/segment/streamlines.py -> build/bdist.linux-armv7l/wheel/scilpy/segment 2024-04-23T22:41:38,959 copying build/lib.linux-armv7l-cpython-39/scilpy/segment/models.py -> build/bdist.linux-armv7l/wheel/scilpy/segment 2024-04-23T22:41:38,961 copying build/lib.linux-armv7l-cpython-39/scilpy/segment/tractogram_from_roi.py -> build/bdist.linux-armv7l/wheel/scilpy/segment 2024-04-23T22:41:38,964 creating build/bdist.linux-armv7l/wheel/scilpy/reconst 2024-04-23T22:41:38,965 copying build/lib.linux-armv7l-cpython-39/scilpy/reconst/sh.py -> build/bdist.linux-armv7l/wheel/scilpy/reconst 2024-04-23T22:41:38,968 copying build/lib.linux-armv7l-cpython-39/scilpy/reconst/mti.py -> build/bdist.linux-armv7l/wheel/scilpy/reconst 2024-04-23T22:41:38,970 copying build/lib.linux-armv7l-cpython-39/scilpy/reconst/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/reconst 2024-04-23T22:41:38,972 copying build/lib.linux-armv7l-cpython-39/scilpy/reconst/fiber_coherence.py -> build/bdist.linux-armv7l/wheel/scilpy/reconst 2024-04-23T22:41:38,973 copying build/lib.linux-armv7l-cpython-39/scilpy/reconst/aodf.py -> build/bdist.linux-armv7l/wheel/scilpy/reconst 2024-04-23T22:41:38,975 copying build/lib.linux-armv7l-cpython-39/scilpy/reconst/fodf.py -> build/bdist.linux-armv7l/wheel/scilpy/reconst 2024-04-23T22:41:38,977 copying build/lib.linux-armv7l-cpython-39/scilpy/reconst/utils.py -> build/bdist.linux-armv7l/wheel/scilpy/reconst 2024-04-23T22:41:38,979 copying build/lib.linux-armv7l-cpython-39/scilpy/reconst/bingham.py -> build/bdist.linux-armv7l/wheel/scilpy/reconst 2024-04-23T22:41:38,982 copying build/lib.linux-armv7l-cpython-39/scilpy/reconst/divide.py -> build/bdist.linux-armv7l/wheel/scilpy/reconst 2024-04-23T22:41:38,984 copying build/lib.linux-armv7l-cpython-39/scilpy/reconst/frf.py -> build/bdist.linux-armv7l/wheel/scilpy/reconst 2024-04-23T22:41:38,987 creating build/bdist.linux-armv7l/wheel/scilpy/preprocessing 2024-04-23T22:41:38,988 copying build/lib.linux-armv7l-cpython-39/scilpy/preprocessing/distortion_correction.py -> build/bdist.linux-armv7l/wheel/scilpy/preprocessing 2024-04-23T22:41:38,990 copying build/lib.linux-armv7l-cpython-39/scilpy/preprocessing/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/preprocessing 2024-04-23T22:41:38,993 creating build/bdist.linux-armv7l/wheel/scilpy/image 2024-04-23T22:41:38,993 copying build/lib.linux-armv7l-cpython-39/scilpy/image/labels.py -> build/bdist.linux-armv7l/wheel/scilpy/image 2024-04-23T22:41:38,996 creating build/bdist.linux-armv7l/wheel/scilpy/image/tests 2024-04-23T22:41:38,997 copying build/lib.linux-armv7l-cpython-39/scilpy/image/tests/test_volume_operations.py -> build/bdist.linux-armv7l/wheel/scilpy/image/tests 2024-04-23T22:41:39,000 copying build/lib.linux-armv7l-cpython-39/scilpy/image/tests/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/image/tests 2024-04-23T22:41:39,001 copying build/lib.linux-armv7l-cpython-39/scilpy/image/tests/test_labels.py -> build/bdist.linux-armv7l/wheel/scilpy/image/tests 2024-04-23T22:41:39,003 copying build/lib.linux-armv7l-cpython-39/scilpy/image/tests/test_volume_math.py -> build/bdist.linux-armv7l/wheel/scilpy/image/tests 2024-04-23T22:41:39,006 copying build/lib.linux-armv7l-cpython-39/scilpy/image/reslice.py -> build/bdist.linux-armv7l/wheel/scilpy/image 2024-04-23T22:41:39,008 copying build/lib.linux-armv7l-cpython-39/scilpy/image/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/image 2024-04-23T22:41:39,009 copying build/lib.linux-armv7l-cpython-39/scilpy/image/volume_math.py -> build/bdist.linux-armv7l/wheel/scilpy/image 2024-04-23T22:41:39,012 copying build/lib.linux-armv7l-cpython-39/scilpy/image/volume_space_management.py -> build/bdist.linux-armv7l/wheel/scilpy/image 2024-04-23T22:41:39,014 copying build/lib.linux-armv7l-cpython-39/scilpy/image/utils.py -> build/bdist.linux-armv7l/wheel/scilpy/image 2024-04-23T22:41:39,016 copying build/lib.linux-armv7l-cpython-39/scilpy/image/volume_b0_synthesis.py -> build/bdist.linux-armv7l/wheel/scilpy/image 2024-04-23T22:41:39,018 copying build/lib.linux-armv7l-cpython-39/scilpy/image/volume_operations.py -> build/bdist.linux-armv7l/wheel/scilpy/image 2024-04-23T22:41:39,022 creating build/bdist.linux-armv7l/wheel/scilpy/viz 2024-04-23T22:41:39,022 copying build/lib.linux-armv7l-cpython-39/scilpy/viz/slice.py -> build/bdist.linux-armv7l/wheel/scilpy/viz 2024-04-23T22:41:39,025 copying build/lib.linux-armv7l-cpython-39/scilpy/viz/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/viz 2024-04-23T22:41:39,027 creating build/bdist.linux-armv7l/wheel/scilpy/viz/backends 2024-04-23T22:41:39,028 copying build/lib.linux-armv7l-cpython-39/scilpy/viz/backends/vtk.py -> build/bdist.linux-armv7l/wheel/scilpy/viz/backends 2024-04-23T22:41:39,030 copying build/lib.linux-armv7l-cpython-39/scilpy/viz/backends/fury.py -> build/bdist.linux-armv7l/wheel/scilpy/viz/backends 2024-04-23T22:41:39,032 copying build/lib.linux-armv7l-cpython-39/scilpy/viz/backends/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/viz/backends 2024-04-23T22:41:39,034 copying build/lib.linux-armv7l-cpython-39/scilpy/viz/backends/pil.py -> build/bdist.linux-armv7l/wheel/scilpy/viz/backends 2024-04-23T22:41:39,036 copying build/lib.linux-armv7l-cpython-39/scilpy/viz/screenshot.py -> build/bdist.linux-armv7l/wheel/scilpy/viz 2024-04-23T22:41:39,039 creating build/bdist.linux-armv7l/wheel/scilpy/viz/legacy 2024-04-23T22:41:39,040 copying build/lib.linux-armv7l-cpython-39/scilpy/viz/legacy/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/viz/legacy 2024-04-23T22:41:39,042 copying build/lib.linux-armv7l-cpython-39/scilpy/viz/legacy/chord_chart.py -> build/bdist.linux-armv7l/wheel/scilpy/viz/legacy 2024-04-23T22:41:39,045 copying build/lib.linux-armv7l-cpython-39/scilpy/viz/utils.py -> build/bdist.linux-armv7l/wheel/scilpy/viz 2024-04-23T22:41:39,047 copying build/lib.linux-armv7l-cpython-39/scilpy/viz/color.py -> build/bdist.linux-armv7l/wheel/scilpy/viz 2024-04-23T22:41:39,049 copying build/lib.linux-armv7l-cpython-39/scilpy/viz/gradients.py -> build/bdist.linux-armv7l/wheel/scilpy/viz 2024-04-23T22:41:39,051 copying build/lib.linux-armv7l-cpython-39/scilpy/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy 2024-04-23T22:41:39,053 creating build/bdist.linux-armv7l/wheel/scilpy/stats 2024-04-23T22:41:39,054 copying build/lib.linux-armv7l-cpython-39/scilpy/stats/matrix_stats.py -> build/bdist.linux-armv7l/wheel/scilpy/stats 2024-04-23T22:41:39,056 copying build/lib.linux-armv7l-cpython-39/scilpy/stats/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/stats 2024-04-23T22:41:39,058 copying build/lib.linux-armv7l-cpython-39/scilpy/stats/stats.py -> build/bdist.linux-armv7l/wheel/scilpy/stats 2024-04-23T22:41:39,060 copying build/lib.linux-armv7l-cpython-39/scilpy/stats/utils.py -> build/bdist.linux-armv7l/wheel/scilpy/stats 2024-04-23T22:41:39,063 creating build/bdist.linux-armv7l/wheel/scilpy/gradients 2024-04-23T22:41:39,064 copying build/lib.linux-armv7l-cpython-39/scilpy/gradients/gen_gradient_sampling.py -> build/bdist.linux-armv7l/wheel/scilpy/gradients 2024-04-23T22:41:39,067 copying build/lib.linux-armv7l-cpython-39/scilpy/gradients/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/gradients 2024-04-23T22:41:39,068 copying build/lib.linux-armv7l-cpython-39/scilpy/gradients/optimize_gradient_sampling.py -> build/bdist.linux-armv7l/wheel/scilpy/gradients 2024-04-23T22:41:39,071 copying build/lib.linux-armv7l-cpython-39/scilpy/gradients/utils.py -> build/bdist.linux-armv7l/wheel/scilpy/gradients 2024-04-23T22:41:39,073 copying build/lib.linux-armv7l-cpython-39/scilpy/gradients/bvec_bval_tools.py -> build/bdist.linux-armv7l/wheel/scilpy/gradients 2024-04-23T22:41:39,075 creating build/bdist.linux-armv7l/wheel/scilpy/connectivity 2024-04-23T22:41:39,076 copying build/lib.linux-armv7l-cpython-39/scilpy/connectivity/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/connectivity 2024-04-23T22:41:39,078 copying build/lib.linux-armv7l-cpython-39/scilpy/connectivity/connectivity_tools.py -> build/bdist.linux-armv7l/wheel/scilpy/connectivity 2024-04-23T22:41:39,081 creating build/bdist.linux-armv7l/wheel/scilpy/io 2024-04-23T22:41:39,082 copying build/lib.linux-armv7l-cpython-39/scilpy/io/image.py -> build/bdist.linux-armv7l/wheel/scilpy/io 2024-04-23T22:41:39,084 copying build/lib.linux-armv7l-cpython-39/scilpy/io/mti.py -> build/bdist.linux-armv7l/wheel/scilpy/io 2024-04-23T22:41:39,087 copying build/lib.linux-armv7l-cpython-39/scilpy/io/btensor.py -> build/bdist.linux-armv7l/wheel/scilpy/io 2024-04-23T22:41:39,089 copying build/lib.linux-armv7l-cpython-39/scilpy/io/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/io 2024-04-23T22:41:39,090 copying build/lib.linux-armv7l-cpython-39/scilpy/io/fetcher.py -> build/bdist.linux-armv7l/wheel/scilpy/io 2024-04-23T22:41:39,093 copying build/lib.linux-armv7l-cpython-39/scilpy/io/deprecator.py -> build/bdist.linux-armv7l/wheel/scilpy/io 2024-04-23T22:41:39,095 copying build/lib.linux-armv7l-cpython-39/scilpy/io/streamlines.py -> build/bdist.linux-armv7l/wheel/scilpy/io 2024-04-23T22:41:39,097 copying build/lib.linux-armv7l-cpython-39/scilpy/io/utils.py -> build/bdist.linux-armv7l/wheel/scilpy/io 2024-04-23T22:41:39,100 copying build/lib.linux-armv7l-cpython-39/scilpy/io/dvc.py -> build/bdist.linux-armv7l/wheel/scilpy/io 2024-04-23T22:41:39,103 copying build/lib.linux-armv7l-cpython-39/scilpy/io/tensor.py -> build/bdist.linux-armv7l/wheel/scilpy/io 2024-04-23T22:41:39,105 copying build/lib.linux-armv7l-cpython-39/scilpy/io/gradients.py -> build/bdist.linux-armv7l/wheel/scilpy/io 2024-04-23T22:41:39,107 copying build/lib.linux-armv7l-cpython-39/scilpy/io/varian_fdf.py -> build/bdist.linux-armv7l/wheel/scilpy/io 2024-04-23T22:41:39,109 copying build/lib.linux-armv7l-cpython-39/scilpy/io/hdf5.py -> build/bdist.linux-armv7l/wheel/scilpy/io 2024-04-23T22:41:39,112 creating build/bdist.linux-armv7l/wheel/scilpy/utils 2024-04-23T22:41:39,113 copying build/lib.linux-armv7l-cpython-39/scilpy/utils/spatial.py -> build/bdist.linux-armv7l/wheel/scilpy/utils 2024-04-23T22:41:39,116 copying build/lib.linux-armv7l-cpython-39/scilpy/utils/metrics_tools.py -> build/bdist.linux-armv7l/wheel/scilpy/utils 2024-04-23T22:41:39,118 copying build/lib.linux-armv7l-cpython-39/scilpy/utils/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/utils 2024-04-23T22:41:39,120 copying build/lib.linux-armv7l-cpython-39/scilpy/utils/filenames.py -> build/bdist.linux-armv7l/wheel/scilpy/utils 2024-04-23T22:41:39,122 creating build/bdist.linux-armv7l/wheel/scilpy/tractograms 2024-04-23T22:41:39,123 copying build/lib.linux-armv7l-cpython-39/scilpy/tractograms/uncompress.pyx -> build/bdist.linux-armv7l/wheel/scilpy/tractograms 2024-04-23T22:41:39,126 creating build/bdist.linux-armv7l/wheel/scilpy/tractograms/tests 2024-04-23T22:41:39,127 copying build/lib.linux-armv7l-cpython-39/scilpy/tractograms/tests/test_tractogram_operations.py -> build/bdist.linux-armv7l/wheel/scilpy/tractograms/tests 2024-04-23T22:41:39,130 copying build/lib.linux-armv7l-cpython-39/scilpy/tractograms/tests/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/tractograms/tests 2024-04-23T22:41:39,131 copying build/lib.linux-armv7l-cpython-39/scilpy/tractograms/tests/test_streamline_and_mask_operations.py -> build/bdist.linux-armv7l/wheel/scilpy/tractograms/tests 2024-04-23T22:41:39,133 copying build/lib.linux-armv7l-cpython-39/scilpy/tractograms/tests/test_dps_and_dpp_management.py -> build/bdist.linux-armv7l/wheel/scilpy/tractograms/tests 2024-04-23T22:41:39,136 copying build/lib.linux-armv7l-cpython-39/scilpy/tractograms/tests/test_streamline_operations.py -> build/bdist.linux-armv7l/wheel/scilpy/tractograms/tests 2024-04-23T22:41:39,138 copying build/lib.linux-armv7l-cpython-39/scilpy/tractograms/uncompress.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/scilpy/tractograms 2024-04-23T22:41:39,163 copying build/lib.linux-armv7l-cpython-39/scilpy/tractograms/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/tractograms 2024-04-23T22:41:39,164 copying build/lib.linux-armv7l-cpython-39/scilpy/tractograms/tractogram_operations.py -> build/bdist.linux-armv7l/wheel/scilpy/tractograms 2024-04-23T22:41:39,167 copying build/lib.linux-armv7l-cpython-39/scilpy/tractograms/streamline_operations.py -> build/bdist.linux-armv7l/wheel/scilpy/tractograms 2024-04-23T22:41:39,170 copying build/lib.linux-armv7l-cpython-39/scilpy/tractograms/streamline_and_mask_operations.py -> build/bdist.linux-armv7l/wheel/scilpy/tractograms 2024-04-23T22:41:39,172 copying build/lib.linux-armv7l-cpython-39/scilpy/tractograms/lazy_tractogram_operations.py -> build/bdist.linux-armv7l/wheel/scilpy/tractograms 2024-04-23T22:41:39,174 copying build/lib.linux-armv7l-cpython-39/scilpy/tractograms/dps_and_dpp_management.py -> build/bdist.linux-armv7l/wheel/scilpy/tractograms 2024-04-23T22:41:39,177 creating build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-04-23T22:41:39,178 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/bundle_operations.py -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-04-23T22:41:39,181 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/streamlines_metrics.pyx -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-04-23T22:41:39,183 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/afd_along_streamlines.py -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-04-23T22:41:39,185 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/json_utils.py -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-04-23T22:41:39,187 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/streamlines_metrics.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-04-23T22:41:39,207 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/bingham_metric_along_streamlines.py -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-04-23T22:41:39,209 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/reproducibility_measures.py -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-04-23T22:41:39,212 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-04-23T22:41:39,213 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/distance_to_centroid.py -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-04-23T22:41:39,215 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/quick_tools.pyx -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-04-23T22:41:39,217 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/grid_intersections.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-04-23T22:41:39,235 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/tools.py -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-04-23T22:41:39,238 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/scoring.py -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-04-23T22:41:39,240 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/grid_intersections.pyx -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-04-23T22:41:39,242 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/todi_util.py -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-04-23T22:41:39,244 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/quick_tools.cpython-39-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-04-23T22:41:39,265 copying build/lib.linux-armv7l-cpython-39/scilpy/tractanalysis/todi.py -> build/bdist.linux-armv7l/wheel/scilpy/tractanalysis 2024-04-23T22:41:39,268 creating build/bdist.linux-armv7l/wheel/scilpy/tracking 2024-04-23T22:41:39,269 copying build/lib.linux-armv7l-cpython-39/scilpy/tracking/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/tracking 2024-04-23T22:41:39,271 copying build/lib.linux-armv7l-cpython-39/scilpy/tracking/seed.py -> build/bdist.linux-armv7l/wheel/scilpy/tracking 2024-04-23T22:41:39,273 copying build/lib.linux-armv7l-cpython-39/scilpy/tracking/utils.py -> build/bdist.linux-armv7l/wheel/scilpy/tracking 2024-04-23T22:41:39,276 copying build/lib.linux-armv7l-cpython-39/scilpy/tracking/propagator.py -> build/bdist.linux-armv7l/wheel/scilpy/tracking 2024-04-23T22:41:39,278 copying build/lib.linux-armv7l-cpython-39/scilpy/tracking/tracker.py -> build/bdist.linux-armv7l/wheel/scilpy/tracking 2024-04-23T22:41:39,282 creating build/bdist.linux-armv7l/wheel/scilpy/denoise 2024-04-23T22:41:39,282 copying build/lib.linux-armv7l-cpython-39/scilpy/denoise/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/denoise 2024-04-23T22:41:39,284 copying build/lib.linux-armv7l-cpython-39/scilpy/denoise/asym_filtering.py -> build/bdist.linux-armv7l/wheel/scilpy/denoise 2024-04-23T22:41:39,287 copying build/lib.linux-armv7l-cpython-39/scilpy/version.py -> build/bdist.linux-armv7l/wheel/scilpy 2024-04-23T22:41:39,289 creating build/bdist.linux-armv7l/wheel/scilpy/dwi 2024-04-23T22:41:39,290 copying build/lib.linux-armv7l-cpython-39/scilpy/dwi/operations.py -> build/bdist.linux-armv7l/wheel/scilpy/dwi 2024-04-23T22:41:39,293 creating build/bdist.linux-armv7l/wheel/scilpy/dwi/tests 2024-04-23T22:41:39,294 copying build/lib.linux-armv7l-cpython-39/scilpy/dwi/tests/test_operations.py -> build/bdist.linux-armv7l/wheel/scilpy/dwi/tests 2024-04-23T22:41:39,296 copying build/lib.linux-armv7l-cpython-39/scilpy/dwi/tests/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/dwi/tests 2024-04-23T22:41:39,298 copying build/lib.linux-armv7l-cpython-39/scilpy/dwi/tests/test_utils.py -> build/bdist.linux-armv7l/wheel/scilpy/dwi/tests 2024-04-23T22:41:39,300 copying build/lib.linux-armv7l-cpython-39/scilpy/dwi/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/dwi 2024-04-23T22:41:39,301 copying build/lib.linux-armv7l-cpython-39/scilpy/dwi/utils.py -> build/bdist.linux-armv7l/wheel/scilpy/dwi 2024-04-23T22:41:39,304 creating build/bdist.linux-armv7l/wheel/scilpy/gpuparallel 2024-04-23T22:41:39,305 copying build/lib.linux-armv7l-cpython-39/scilpy/gpuparallel/__init__.py -> build/bdist.linux-armv7l/wheel/scilpy/gpuparallel 2024-04-23T22:41:39,306 copying build/lib.linux-armv7l-cpython-39/scilpy/gpuparallel/opencl_utils.py -> build/bdist.linux-armv7l/wheel/scilpy/gpuparallel 2024-04-23T22:41:39,308 running install_data 2024-04-23T22:41:39,350 creating build/bdist.linux-armv7l/wheel/scilpy-2.0.0.data 2024-04-23T22:41:39,350 creating build/bdist.linux-armv7l/wheel/scilpy-2.0.0.data/data 2024-04-23T22:41:39,351 creating build/bdist.linux-armv7l/wheel/scilpy-2.0.0.data/data/data 2024-04-23T22:41:39,352 creating build/bdist.linux-armv7l/wheel/scilpy-2.0.0.data/data/data/LUT 2024-04-23T22:41:39,354 copying data/LUT/freesurfer_desikan_killiany.json -> build/bdist.linux-armv7l/wheel/scilpy-2.0.0.data/data/data/LUT 2024-04-23T22:41:39,356 copying data/LUT/freesurfer_subcortical.json -> build/bdist.linux-armv7l/wheel/scilpy-2.0.0.data/data/data/LUT 2024-04-23T22:41:39,358 copying data/LUT/dk_aggregate_structures.json -> build/bdist.linux-armv7l/wheel/scilpy-2.0.0.data/data/data/LUT 2024-04-23T22:41:39,360 running install_egg_info 2024-04-23T22:41:39,399 Copying scilpy.egg-info to build/bdist.linux-armv7l/wheel/scilpy-2.0.0-py3.9.egg-info 2024-04-23T22:41:39,413 running install_scripts 2024-04-23T22:41:39,452 adding license file "LICENSE" (matched pattern "LICEN[CS]E*") 2024-04-23T22:41:39,457 creating build/bdist.linux-armv7l/wheel/scilpy-2.0.0.dist-info/WHEEL 2024-04-23T22:41:39,459 creating '/tmp/pip-wheel-k9v3j2fe/scilpy-2.0.0-cp39-cp39-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-04-23T22:41:39,462 adding 'scilpy/__init__.py' 2024-04-23T22:41:39,463 adding 'scilpy/version.py' 2024-04-23T22:41:39,465 adding 'scilpy/connectivity/__init__.py' 2024-04-23T22:41:39,467 adding 'scilpy/connectivity/connectivity_tools.py' 2024-04-23T22:41:39,468 adding 'scilpy/denoise/__init__.py' 2024-04-23T22:41:39,471 adding 'scilpy/denoise/asym_filtering.py' 2024-04-23T22:41:39,473 adding 'scilpy/dwi/__init__.py' 2024-04-23T22:41:39,475 adding 'scilpy/dwi/operations.py' 2024-04-23T22:41:39,477 adding 'scilpy/dwi/utils.py' 2024-04-23T22:41:39,479 adding 'scilpy/dwi/tests/__init__.py' 2024-04-23T22:41:39,480 adding 'scilpy/dwi/tests/test_operations.py' 2024-04-23T22:41:39,482 adding 'scilpy/dwi/tests/test_utils.py' 2024-04-23T22:41:39,483 adding 'scilpy/gpuparallel/__init__.py' 2024-04-23T22:41:39,485 adding 'scilpy/gpuparallel/opencl_utils.py' 2024-04-23T22:41:39,487 adding 'scilpy/gradients/__init__.py' 2024-04-23T22:41:39,489 adding 'scilpy/gradients/bvec_bval_tools.py' 2024-04-23T22:41:39,491 adding 'scilpy/gradients/gen_gradient_sampling.py' 2024-04-23T22:41:39,493 adding 'scilpy/gradients/optimize_gradient_sampling.py' 2024-04-23T22:41:39,494 adding 'scilpy/gradients/utils.py' 2024-04-23T22:41:39,496 adding 'scilpy/image/__init__.py' 2024-04-23T22:41:39,498 adding 'scilpy/image/labels.py' 2024-04-23T22:41:39,500 adding 'scilpy/image/reslice.py' 2024-04-23T22:41:39,502 adding 'scilpy/image/utils.py' 2024-04-23T22:41:39,503 adding 'scilpy/image/volume_b0_synthesis.py' 2024-04-23T22:41:39,506 adding 'scilpy/image/volume_math.py' 2024-04-23T22:41:39,509 adding 'scilpy/image/volume_operations.py' 2024-04-23T22:41:39,511 adding 'scilpy/image/volume_space_management.py' 2024-04-23T22:41:39,512 adding 'scilpy/image/tests/__init__.py' 2024-04-23T22:41:39,514 adding 'scilpy/image/tests/test_labels.py' 2024-04-23T22:41:39,516 adding 'scilpy/image/tests/test_volume_math.py' 2024-04-23T22:41:39,518 adding 'scilpy/image/tests/test_volume_operations.py' 2024-04-23T22:41:39,519 adding 'scilpy/io/__init__.py' 2024-04-23T22:41:39,521 adding 'scilpy/io/btensor.py' 2024-04-23T22:41:39,522 adding 'scilpy/io/deprecator.py' 2024-04-23T22:41:39,524 adding 'scilpy/io/dvc.py' 2024-04-23T22:41:39,525 adding 'scilpy/io/fetcher.py' 2024-04-23T22:41:39,527 adding 'scilpy/io/gradients.py' 2024-04-23T22:41:39,529 adding 'scilpy/io/hdf5.py' 2024-04-23T22:41:39,530 adding 'scilpy/io/image.py' 2024-04-23T22:41:39,532 adding 'scilpy/io/mti.py' 2024-04-23T22:41:39,534 adding 'scilpy/io/streamlines.py' 2024-04-23T22:41:39,536 adding 'scilpy/io/tensor.py' 2024-04-23T22:41:39,540 adding 'scilpy/io/utils.py' 2024-04-23T22:41:39,543 adding 'scilpy/io/varian_fdf.py' 2024-04-23T22:41:39,545 adding 'scilpy/preprocessing/__init__.py' 2024-04-23T22:41:39,546 adding 'scilpy/preprocessing/distortion_correction.py' 2024-04-23T22:41:39,548 adding 'scilpy/reconst/__init__.py' 2024-04-23T22:41:39,549 adding 'scilpy/reconst/aodf.py' 2024-04-23T22:41:39,552 adding 'scilpy/reconst/bingham.py' 2024-04-23T22:41:39,554 adding 'scilpy/reconst/divide.py' 2024-04-23T22:41:39,555 adding 'scilpy/reconst/fiber_coherence.py' 2024-04-23T22:41:39,557 adding 'scilpy/reconst/fodf.py' 2024-04-23T22:41:39,559 adding 'scilpy/reconst/frf.py' 2024-04-23T22:41:39,561 adding 'scilpy/reconst/mti.py' 2024-04-23T22:41:39,564 adding 'scilpy/reconst/sh.py' 2024-04-23T22:41:39,566 adding 'scilpy/reconst/utils.py' 2024-04-23T22:41:39,567 adding 'scilpy/segment/__init__.py' 2024-04-23T22:41:39,569 adding 'scilpy/segment/models.py' 2024-04-23T22:41:39,571 adding 'scilpy/segment/recobundlesx.py' 2024-04-23T22:41:39,573 adding 'scilpy/segment/streamlines.py' 2024-04-23T22:41:39,576 adding 'scilpy/segment/tractogram_from_roi.py' 2024-04-23T22:41:39,578 adding 'scilpy/segment/voting_scheme.py' 2024-04-23T22:41:39,580 adding 'scilpy/stats/__init__.py' 2024-04-23T22:41:39,582 adding 'scilpy/stats/matrix_stats.py' 2024-04-23T22:41:39,584 adding 'scilpy/stats/stats.py' 2024-04-23T22:41:39,586 adding 'scilpy/stats/utils.py' 2024-04-23T22:41:39,588 adding 'scilpy/tracking/__init__.py' 2024-04-23T22:41:39,590 adding 'scilpy/tracking/propagator.py' 2024-04-23T22:41:39,593 adding 'scilpy/tracking/seed.py' 2024-04-23T22:41:39,596 adding 'scilpy/tracking/tracker.py' 2024-04-23T22:41:39,599 adding 'scilpy/tracking/utils.py' 2024-04-23T22:41:39,601 adding 'scilpy/tractanalysis/__init__.py' 2024-04-23T22:41:39,602 adding 'scilpy/tractanalysis/afd_along_streamlines.py' 2024-04-23T22:41:39,603 adding 'scilpy/tractanalysis/bingham_metric_along_streamlines.py' 2024-04-23T22:41:39,606 adding 'scilpy/tractanalysis/bundle_operations.py' 2024-04-23T22:41:39,607 adding 'scilpy/tractanalysis/distance_to_centroid.py' 2024-04-23T22:41:39,808 adding 'scilpy/tractanalysis/grid_intersections.cpython-39-arm-linux-gnueabihf.so' 2024-04-23T22:41:39,817 adding 'scilpy/tractanalysis/grid_intersections.pyx' 2024-04-23T22:41:39,818 adding 'scilpy/tractanalysis/json_utils.py' 2024-04-23T22:41:40,005 adding 'scilpy/tractanalysis/quick_tools.cpython-39-arm-linux-gnueabihf.so' 2024-04-23T22:41:40,011 adding 'scilpy/tractanalysis/quick_tools.pyx' 2024-04-23T22:41:40,014 adding 'scilpy/tractanalysis/reproducibility_measures.py' 2024-04-23T22:41:40,017 adding 'scilpy/tractanalysis/scoring.py' 2024-04-23T22:41:40,224 adding 'scilpy/tractanalysis/streamlines_metrics.cpython-39-arm-linux-gnueabihf.so' 2024-04-23T22:41:40,232 adding 'scilpy/tractanalysis/streamlines_metrics.pyx' 2024-04-23T22:41:40,234 adding 'scilpy/tractanalysis/todi.py' 2024-04-23T22:41:40,236 adding 'scilpy/tractanalysis/todi_util.py' 2024-04-23T22:41:40,238 adding 'scilpy/tractanalysis/tools.py' 2024-04-23T22:41:40,239 adding 'scilpy/tractograms/__init__.py' 2024-04-23T22:41:40,242 adding 'scilpy/tractograms/dps_and_dpp_management.py' 2024-04-23T22:41:40,243 adding 'scilpy/tractograms/lazy_tractogram_operations.py' 2024-04-23T22:41:40,245 adding 'scilpy/tractograms/streamline_and_mask_operations.py' 2024-04-23T22:41:40,249 adding 'scilpy/tractograms/streamline_operations.py' 2024-04-23T22:41:40,253 adding 'scilpy/tractograms/tractogram_operations.py' 2024-04-23T22:41:40,460 adding 'scilpy/tractograms/uncompress.cpython-39-arm-linux-gnueabihf.so' 2024-04-23T22:41:40,468 adding 'scilpy/tractograms/uncompress.pyx' 2024-04-23T22:41:40,470 adding 'scilpy/tractograms/tests/__init__.py' 2024-04-23T22:41:40,471 adding 'scilpy/tractograms/tests/test_dps_and_dpp_management.py' 2024-04-23T22:41:40,473 adding 'scilpy/tractograms/tests/test_streamline_and_mask_operations.py' 2024-04-23T22:41:40,475 adding 'scilpy/tractograms/tests/test_streamline_operations.py' 2024-04-23T22:41:40,477 adding 'scilpy/tractograms/tests/test_tractogram_operations.py' 2024-04-23T22:41:40,479 adding 'scilpy/utils/__init__.py' 2024-04-23T22:41:40,480 adding 'scilpy/utils/filenames.py' 2024-04-23T22:41:40,482 adding 'scilpy/utils/metrics_tools.py' 2024-04-23T22:41:40,484 adding 'scilpy/utils/spatial.py' 2024-04-23T22:41:40,486 adding 'scilpy/viz/__init__.py' 2024-04-23T22:41:40,488 adding 'scilpy/viz/color.py' 2024-04-23T22:41:40,489 adding 'scilpy/viz/gradients.py' 2024-04-23T22:41:40,491 adding 'scilpy/viz/screenshot.py' 2024-04-23T22:41:40,493 adding 'scilpy/viz/slice.py' 2024-04-23T22:41:40,494 adding 'scilpy/viz/utils.py' 2024-04-23T22:41:40,496 adding 'scilpy/viz/backends/__init__.py' 2024-04-23T22:41:40,498 adding 'scilpy/viz/backends/fury.py' 2024-04-23T22:41:40,501 adding 'scilpy/viz/backends/pil.py' 2024-04-23T22:41:40,502 adding 'scilpy/viz/backends/vtk.py' 2024-04-23T22:41:40,504 adding 'scilpy/viz/legacy/__init__.py' 2024-04-23T22:41:40,506 adding 'scilpy/viz/legacy/chord_chart.py' 2024-04-23T22:41:40,509 adding 'scilpy-2.0.0.data/data/data/LUT/dk_aggregate_structures.json' 2024-04-23T22:41:40,510 adding 'scilpy-2.0.0.data/data/data/LUT/freesurfer_desikan_killiany.json' 2024-04-23T22:41:40,512 adding 'scilpy-2.0.0.data/data/data/LUT/freesurfer_subcortical.json' 2024-04-23T22:41:40,518 adding 'scripts/__init__.py' 2024-04-23T22:41:40,519 adding 'scripts/scil_NODDI_maps.py' 2024-04-23T22:41:40,521 adding 'scripts/scil_NODDI_priors.py' 2024-04-23T22:41:40,523 adding 'scripts/scil_aodf_metrics.py' 2024-04-23T22:41:40,525 adding 'scripts/scil_bids_validate.py' 2024-04-23T22:41:40,527 adding 'scripts/scil_bingham_metrics.py' 2024-04-23T22:41:40,529 adding 'scripts/scil_btensor_metrics.py' 2024-04-23T22:41:40,531 adding 'scripts/scil_bundle_clean_qbx_clusters.py' 2024-04-23T22:41:40,533 adding 'scripts/scil_bundle_compute_centroid.py' 2024-04-23T22:41:40,534 adding 'scripts/scil_bundle_compute_endpoints_map.py' 2024-04-23T22:41:40,537 adding 'scripts/scil_bundle_diameter.py' 2024-04-23T22:41:40,538 adding 'scripts/scil_bundle_filter_by_occurence.py' 2024-04-23T22:41:40,540 adding 'scripts/scil_bundle_generate_priors.py' 2024-04-23T22:41:40,542 adding 'scripts/scil_bundle_label_map.py' 2024-04-23T22:41:40,543 adding 'scripts/scil_bundle_mean_fixel_afd.py' 2024-04-23T22:41:40,545 adding 'scripts/scil_bundle_mean_fixel_afd_from_hdf5.py' 2024-04-23T22:41:40,546 adding 'scripts/scil_bundle_mean_fixel_bingham_metric.py' 2024-04-23T22:41:40,548 adding 'scripts/scil_bundle_mean_std.py' 2024-04-23T22:41:40,550 adding 'scripts/scil_bundle_pairwise_comparison.py' 2024-04-23T22:41:40,552 adding 'scripts/scil_bundle_reject_outliers.py' 2024-04-23T22:41:40,554 adding 'scripts/scil_bundle_score_many_bundles_one_tractogram.py' 2024-04-23T22:41:40,555 adding 'scripts/scil_bundle_score_same_bundle_many_segmentations.py' 2024-04-23T22:41:40,557 adding 'scripts/scil_bundle_shape_measures.py' 2024-04-23T22:41:40,559 adding 'scripts/scil_bundle_volume_per_label.py' 2024-04-23T22:41:40,560 adding 'scripts/scil_connectivity_compare_populations.py' 2024-04-23T22:41:40,563 adding 'scripts/scil_connectivity_compute_matrices.py' 2024-04-23T22:41:40,565 adding 'scripts/scil_connectivity_compute_pca.py' 2024-04-23T22:41:40,567 adding 'scripts/scil_connectivity_filter.py' 2024-04-23T22:41:40,569 adding 'scripts/scil_connectivity_graph_measures.py' 2024-04-23T22:41:40,570 adding 'scripts/scil_connectivity_hdf5_average_density_map.py' 2024-04-23T22:41:40,572 adding 'scripts/scil_connectivity_math.py' 2024-04-23T22:41:40,573 adding 'scripts/scil_connectivity_normalize.py' 2024-04-23T22:41:40,575 adding 'scripts/scil_connectivity_pairwise_agreement.py' 2024-04-23T22:41:40,576 adding 'scripts/scil_connectivity_print_filenames.py' 2024-04-23T22:41:40,578 adding 'scripts/scil_connectivity_reorder_rois.py' 2024-04-23T22:41:40,579 adding 'scripts/scil_denoising_nlmeans.py' 2024-04-23T22:41:40,581 adding 'scripts/scil_dki_metrics.py' 2024-04-23T22:41:40,583 adding 'scripts/scil_dti_convert_tensors.py' 2024-04-23T22:41:40,585 adding 'scripts/scil_dti_metrics.py' 2024-04-23T22:41:40,587 adding 'scripts/scil_dwi_apply_bias_field.py' 2024-04-23T22:41:40,589 adding 'scripts/scil_dwi_compute_snr.py' 2024-04-23T22:41:40,590 adding 'scripts/scil_dwi_concatenate.py' 2024-04-23T22:41:40,591 adding 'scripts/scil_dwi_convert_FDF.py' 2024-04-23T22:41:40,593 adding 'scripts/scil_dwi_detect_volume_outliers.py' 2024-04-23T22:41:40,594 adding 'scripts/scil_dwi_extract_b0.py' 2024-04-23T22:41:40,596 adding 'scripts/scil_dwi_extract_shell.py' 2024-04-23T22:41:40,597 adding 'scripts/scil_dwi_powder_average.py' 2024-04-23T22:41:40,599 adding 'scripts/scil_dwi_prepare_eddy_command.py' 2024-04-23T22:41:40,601 adding 'scripts/scil_dwi_prepare_topup_command.py' 2024-04-23T22:41:40,602 adding 'scripts/scil_dwi_reorder_philips.py' 2024-04-23T22:41:40,603 adding 'scripts/scil_dwi_split_by_indices.py' 2024-04-23T22:41:40,605 adding 'scripts/scil_dwi_to_sh.py' 2024-04-23T22:41:40,606 adding 'scripts/scil_fodf_max_in_ventricles.py' 2024-04-23T22:41:40,608 adding 'scripts/scil_fodf_memsmt.py' 2024-04-23T22:41:40,610 adding 'scripts/scil_fodf_metrics.py' 2024-04-23T22:41:40,612 adding 'scripts/scil_fodf_msmt.py' 2024-04-23T22:41:40,614 adding 'scripts/scil_fodf_ssst.py' 2024-04-23T22:41:40,615 adding 'scripts/scil_fodf_to_bingham.py' 2024-04-23T22:41:40,617 adding 'scripts/scil_freewater_maps.py' 2024-04-23T22:41:40,618 adding 'scripts/scil_freewater_priors.py' 2024-04-23T22:41:40,619 adding 'scripts/scil_frf_mean.py' 2024-04-23T22:41:40,621 adding 'scripts/scil_frf_memsmt.py' 2024-04-23T22:41:40,623 adding 'scripts/scil_frf_msmt.py' 2024-04-23T22:41:40,625 adding 'scripts/scil_frf_set_diffusivities.py' 2024-04-23T22:41:40,626 adding 'scripts/scil_frf_ssst.py' 2024-04-23T22:41:40,628 adding 'scripts/scil_get_version.py' 2024-04-23T22:41:40,629 adding 'scripts/scil_gradients_apply_transform.py' 2024-04-23T22:41:40,631 adding 'scripts/scil_gradients_convert.py' 2024-04-23T22:41:40,632 adding 'scripts/scil_gradients_generate_sampling.py' 2024-04-23T22:41:40,634 adding 'scripts/scil_gradients_modify_axes.py' 2024-04-23T22:41:40,635 adding 'scripts/scil_gradients_round_bvals.py' 2024-04-23T22:41:40,637 adding 'scripts/scil_gradients_validate_correct.py' 2024-04-23T22:41:40,638 adding 'scripts/scil_gradients_validate_correct_eddy.py' 2024-04-23T22:41:40,639 adding 'scripts/scil_header_print_info.py' 2024-04-23T22:41:40,641 adding 'scripts/scil_header_validate_compatibility.py' 2024-04-23T22:41:40,643 adding 'scripts/scil_json_convert_entries_to_xlsx.py' 2024-04-23T22:41:40,644 adding 'scripts/scil_json_harmonize_entries.py' 2024-04-23T22:41:40,646 adding 'scripts/scil_json_merge_entries.py' 2024-04-23T22:41:40,647 adding 'scripts/scil_labels_combine.py' 2024-04-23T22:41:40,649 adding 'scripts/scil_labels_dilate.py' 2024-04-23T22:41:40,650 adding 'scripts/scil_labels_remove.py' 2024-04-23T22:41:40,651 adding 'scripts/scil_labels_split_volume_by_ids.py' 2024-04-23T22:41:40,653 adding 'scripts/scil_labels_split_volume_from_lut.py' 2024-04-23T22:41:40,654 adding 'scripts/scil_lesions_info.py' 2024-04-23T22:41:40,656 adding 'scripts/scil_mti_adjust_B1_header.py' 2024-04-23T22:41:40,658 adding 'scripts/scil_mti_maps_MT.py' 2024-04-23T22:41:40,660 adding 'scripts/scil_mti_maps_ihMT.py' 2024-04-23T22:41:40,662 adding 'scripts/scil_plot_stats_per_point.py' 2024-04-23T22:41:40,664 adding 'scripts/scil_qball_metrics.py' 2024-04-23T22:41:40,665 adding 'scripts/scil_rgb_convert.py' 2024-04-23T22:41:40,667 adding 'scripts/scil_search_keywords.py' 2024-04-23T22:41:40,668 adding 'scripts/scil_sh_convert.py' 2024-04-23T22:41:40,670 adding 'scripts/scil_sh_fusion.py' 2024-04-23T22:41:40,671 adding 'scripts/scil_sh_to_aodf.py' 2024-04-23T22:41:40,673 adding 'scripts/scil_sh_to_rish.py' 2024-04-23T22:41:40,674 adding 'scripts/scil_sh_to_sf.py' 2024-04-23T22:41:40,676 adding 'scripts/scil_stats_group_comparison.py' 2024-04-23T22:41:40,678 adding 'scripts/scil_surface_apply_transform.py' 2024-04-23T22:41:40,679 adding 'scripts/scil_surface_convert.py' 2024-04-23T22:41:40,680 adding 'scripts/scil_surface_flip.py' 2024-04-23T22:41:40,682 adding 'scripts/scil_surface_smooth.py' 2024-04-23T22:41:40,684 adding 'scripts/scil_tracking_local.py' 2024-04-23T22:41:40,686 adding 'scripts/scil_tracking_local_dev.py' 2024-04-23T22:41:40,688 adding 'scripts/scil_tracking_pft.py' 2024-04-23T22:41:40,690 adding 'scripts/scil_tracking_pft_maps.py' 2024-04-23T22:41:40,691 adding 'scripts/scil_tracking_pft_maps_edit.py' 2024-04-23T22:41:40,693 adding 'scripts/scil_tractogram_apply_transform.py' 2024-04-23T22:41:40,694 adding 'scripts/scil_tractogram_apply_transform_to_hdf5.py' 2024-04-23T22:41:40,696 adding 'scripts/scil_tractogram_assign_custom_color.py' 2024-04-23T22:41:40,698 adding 'scripts/scil_tractogram_assign_uniform_color.py' 2024-04-23T22:41:40,701 adding 'scripts/scil_tractogram_commit.py' 2024-04-23T22:41:40,702 adding 'scripts/scil_tractogram_compress.py' 2024-04-23T22:41:40,704 adding 'scripts/scil_tractogram_compute_TODI.py' 2024-04-23T22:41:40,706 adding 'scripts/scil_tractogram_compute_density_map.py' 2024-04-23T22:41:40,707 adding 'scripts/scil_tractogram_convert.py' 2024-04-23T22:41:40,708 adding 'scripts/scil_tractogram_convert_hdf5_to_trk.py' 2024-04-23T22:41:40,710 adding 'scripts/scil_tractogram_count_streamlines.py' 2024-04-23T22:41:40,711 adding 'scripts/scil_tractogram_cut_streamlines.py' 2024-04-23T22:41:40,713 adding 'scripts/scil_tractogram_detect_loops.py' 2024-04-23T22:41:40,715 adding 'scripts/scil_tractogram_dpp_math.py' 2024-04-23T22:41:40,716 adding 'scripts/scil_tractogram_extract_ushape.py' 2024-04-23T22:41:40,718 adding 'scripts/scil_tractogram_filter_by_anatomy.py' 2024-04-23T22:41:40,720 adding 'scripts/scil_tractogram_filter_by_length.py' 2024-04-23T22:41:40,721 adding 'scripts/scil_tractogram_filter_by_orientation.py' 2024-04-23T22:41:40,724 adding 'scripts/scil_tractogram_filter_by_roi.py' 2024-04-23T22:41:40,726 adding 'scripts/scil_tractogram_fix_trk.py' 2024-04-23T22:41:40,727 adding 'scripts/scil_tractogram_flip.py' 2024-04-23T22:41:40,729 adding 'scripts/scil_tractogram_math.py' 2024-04-23T22:41:40,731 adding 'scripts/scil_tractogram_pairwise_comparison.py' 2024-04-23T22:41:40,732 adding 'scripts/scil_tractogram_print_info.py' 2024-04-23T22:41:40,734 adding 'scripts/scil_tractogram_project_map_to_streamlines.py' 2024-04-23T22:41:40,735 adding 'scripts/scil_tractogram_project_streamlines_to_map.py' 2024-04-23T22:41:40,737 adding 'scripts/scil_tractogram_qbx.py' 2024-04-23T22:41:40,739 adding 'scripts/scil_tractogram_register.py' 2024-04-23T22:41:40,740 adding 'scripts/scil_tractogram_remove_invalid.py' 2024-04-23T22:41:40,742 adding 'scripts/scil_tractogram_resample.py' 2024-04-23T22:41:40,743 adding 'scripts/scil_tractogram_resample_nb_points.py' 2024-04-23T22:41:40,745 adding 'scripts/scil_tractogram_seed_density_map.py' 2024-04-23T22:41:40,747 adding 'scripts/scil_tractogram_segment_and_score.py' 2024-04-23T22:41:40,749 adding 'scripts/scil_tractogram_segment_bundles.py' 2024-04-23T22:41:40,752 adding 'scripts/scil_tractogram_segment_bundles_for_connectivity.py' 2024-04-23T22:41:40,753 adding 'scripts/scil_tractogram_segment_one_bundle.py' 2024-04-23T22:41:40,754 adding 'scripts/scil_tractogram_shuffle.py' 2024-04-23T22:41:40,756 adding 'scripts/scil_tractogram_smooth.py' 2024-04-23T22:41:40,758 adding 'scripts/scil_tractogram_split.py' 2024-04-23T22:41:40,759 adding 'scripts/scil_tractogram_uniformize_endpoints.py' 2024-04-23T22:41:40,761 adding 'scripts/scil_viz_bingham_fit.py' 2024-04-23T22:41:40,762 adding 'scripts/scil_viz_bundle.py' 2024-04-23T22:41:40,764 adding 'scripts/scil_viz_bundle_screenshot_mni.py' 2024-04-23T22:41:40,766 adding 'scripts/scil_viz_bundle_screenshot_mosaic.py' 2024-04-23T22:41:40,769 adding 'scripts/scil_viz_connectivity.py' 2024-04-23T22:41:40,770 adding 'scripts/scil_viz_dti_screenshot.py' 2024-04-23T22:41:40,773 adding 'scripts/scil_viz_fodf.py' 2024-04-23T22:41:40,774 adding 'scripts/scil_viz_gradients_screenshot.py' 2024-04-23T22:41:40,776 adding 'scripts/scil_viz_tractogram_seeds.py' 2024-04-23T22:41:40,777 adding 'scripts/scil_viz_tractogram_seeds_3d.py' 2024-04-23T22:41:40,779 adding 'scripts/scil_viz_volume_histogram.py' 2024-04-23T22:41:40,780 adding 'scripts/scil_viz_volume_scatterplot.py' 2024-04-23T22:41:40,782 adding 'scripts/scil_viz_volume_screenshot.py' 2024-04-23T22:41:40,784 adding 'scripts/scil_viz_volume_screenshot_mosaic.py' 2024-04-23T22:41:40,785 adding 'scripts/scil_volume_apply_transform.py' 2024-04-23T22:41:40,787 adding 'scripts/scil_volume_b0_synthesis.py' 2024-04-23T22:41:40,788 adding 'scripts/scil_volume_count_non_zero_voxels.py' 2024-04-23T22:41:40,789 adding 'scripts/scil_volume_crop.py' 2024-04-23T22:41:40,791 adding 'scripts/scil_volume_flip.py' 2024-04-23T22:41:40,792 adding 'scripts/scil_volume_math.py' 2024-04-23T22:41:40,794 adding 'scripts/scil_volume_remove_outliers_ransac.py' 2024-04-23T22:41:40,795 adding 'scripts/scil_volume_resample.py' 2024-04-23T22:41:40,796 adding 'scripts/scil_volume_reshape_to_reference.py' 2024-04-23T22:41:40,798 adding 'scripts/scil_volume_stats_in_ROI.py' 2024-04-23T22:41:40,799 adding 'scripts/scil_volume_stats_in_labels.py' 2024-04-23T22:41:40,804 adding 'scripts/legacy/__init__.py' 2024-04-23T22:41:40,805 adding 'scripts/legacy/scil_add_tracking_mask_to_pft_maps.py' 2024-04-23T22:41:40,806 adding 'scripts/legacy/scil_analyse_lesions_load.py' 2024-04-23T22:41:40,807 adding 'scripts/legacy/scil_apply_bias_field_on_dwi.py' 2024-04-23T22:41:40,808 adding 'scripts/legacy/scil_apply_transform_to_bvecs.py' 2024-04-23T22:41:40,810 adding 'scripts/legacy/scil_apply_transform_to_hdf5.py' 2024-04-23T22:41:40,811 adding 'scripts/legacy/scil_apply_transform_to_image.py' 2024-04-23T22:41:40,812 adding 'scripts/legacy/scil_apply_transform_to_surface.py' 2024-04-23T22:41:40,813 adding 'scripts/legacy/scil_apply_transform_to_tractogram.py' 2024-04-23T22:41:40,815 adding 'scripts/legacy/scil_assign_custom_color_to_tractogram.py' 2024-04-23T22:41:40,816 adding 'scripts/legacy/scil_assign_uniform_color_to_tractograms.py' 2024-04-23T22:41:40,817 adding 'scripts/legacy/scil_clean_qbx_clusters.py' 2024-04-23T22:41:40,818 adding 'scripts/legacy/scil_combine_labels.py' 2024-04-23T22:41:40,819 adding 'scripts/legacy/scil_compare_connectivity.py' 2024-04-23T22:41:40,821 adding 'scripts/legacy/scil_compress_streamlines.py' 2024-04-23T22:41:40,822 adding 'scripts/legacy/scil_compute_MT_maps.py' 2024-04-23T22:41:40,823 adding 'scripts/legacy/scil_compute_NODDI.py' 2024-04-23T22:41:40,824 adding 'scripts/legacy/scil_compute_NODDI_priors.py' 2024-04-23T22:41:40,825 adding 'scripts/legacy/scil_compute_asym_odf_metrics.py' 2024-04-23T22:41:40,827 adding 'scripts/legacy/scil_compute_bundle_mean_std.py' 2024-04-23T22:41:40,828 adding 'scripts/legacy/scil_compute_bundle_mean_std_per_point.py' 2024-04-23T22:41:40,829 adding 'scripts/legacy/scil_compute_bundle_volume.py' 2024-04-23T22:41:40,830 adding 'scripts/legacy/scil_compute_bundle_volume_per_label.py' 2024-04-23T22:41:40,832 adding 'scripts/legacy/scil_compute_bundle_voxel_label_map.py' 2024-04-23T22:41:40,833 adding 'scripts/legacy/scil_compute_centroid.py' 2024-04-23T22:41:40,834 adding 'scripts/legacy/scil_compute_connectivity.py' 2024-04-23T22:41:40,835 adding 'scripts/legacy/scil_compute_divide.py' 2024-04-23T22:41:40,836 adding 'scripts/legacy/scil_compute_dti_metrics.py' 2024-04-23T22:41:40,838 adding 'scripts/legacy/scil_compute_endpoints_map.py' 2024-04-23T22:41:40,839 adding 'scripts/legacy/scil_compute_fodf_max_in_ventricles.py' 2024-04-23T22:41:40,840 adding 'scripts/legacy/scil_compute_fodf_metrics.py' 2024-04-23T22:41:40,841 adding 'scripts/legacy/scil_compute_freewater.py' 2024-04-23T22:41:40,842 adding 'scripts/legacy/scil_compute_hdf5_average_density_map.py' 2024-04-23T22:41:40,843 adding 'scripts/legacy/scil_compute_ihMT_maps.py' 2024-04-23T22:41:40,844 adding 'scripts/legacy/scil_compute_kurtosis_metrics.py' 2024-04-23T22:41:40,846 adding 'scripts/legacy/scil_compute_lobe_specific_fodf_metrics.py' 2024-04-23T22:41:40,847 adding 'scripts/legacy/scil_compute_local_tracking.py' 2024-04-23T22:41:40,848 adding 'scripts/legacy/scil_compute_local_tracking_dev.py' 2024-04-23T22:41:40,849 adding 'scripts/legacy/scil_compute_maps_for_particle_filter_tracking.py' 2024-04-23T22:41:40,850 adding 'scripts/legacy/scil_compute_mean_fixel_afd_from_bundles.py' 2024-04-23T22:41:40,852 adding 'scripts/legacy/scil_compute_mean_fixel_afd_from_hdf5.py' 2024-04-23T22:41:40,853 adding 'scripts/legacy/scil_compute_mean_fixel_lobe_metric_from_bundles.py' 2024-04-23T22:41:40,854 adding 'scripts/legacy/scil_compute_mean_frf.py' 2024-04-23T22:41:40,855 adding 'scripts/legacy/scil_compute_memsmt_fodf.py' 2024-04-23T22:41:40,856 adding 'scripts/legacy/scil_compute_memsmt_frf.py' 2024-04-23T22:41:40,857 adding 'scripts/legacy/scil_compute_metrics_stats_in_ROI.py' 2024-04-23T22:41:40,859 adding 'scripts/legacy/scil_compute_msmt_fodf.py' 2024-04-23T22:41:40,860 adding 'scripts/legacy/scil_compute_msmt_frf.py' 2024-04-23T22:41:40,861 adding 'scripts/legacy/scil_compute_pca.py' 2024-04-23T22:41:40,862 adding 'scripts/legacy/scil_compute_pft.py' 2024-04-23T22:41:40,863 adding 'scripts/legacy/scil_compute_powder_average.py' 2024-04-23T22:41:40,865 adding 'scripts/legacy/scil_compute_qball_metrics.py' 2024-04-23T22:41:40,866 adding 'scripts/legacy/scil_compute_qbx.py' 2024-04-23T22:41:40,867 adding 'scripts/legacy/scil_compute_rish_from_sh.py' 2024-04-23T22:41:40,868 adding 'scripts/legacy/scil_compute_seed_by_labels.py' 2024-04-23T22:41:40,870 adding 'scripts/legacy/scil_compute_seed_density_map.py' 2024-04-23T22:41:40,871 adding 'scripts/legacy/scil_compute_sf_from_sh.py' 2024-04-23T22:41:40,872 adding 'scripts/legacy/scil_compute_sh_from_signal.py' 2024-04-23T22:41:40,873 adding 'scripts/legacy/scil_compute_ssst_fodf.py' 2024-04-23T22:41:40,874 adding 'scripts/legacy/scil_compute_ssst_frf.py' 2024-04-23T22:41:40,876 adding 'scripts/legacy/scil_compute_streamlines_density_map.py' 2024-04-23T22:41:40,877 adding 'scripts/legacy/scil_compute_streamlines_length_stats.py' 2024-04-23T22:41:40,878 adding 'scripts/legacy/scil_compute_todi.py' 2024-04-23T22:41:40,879 adding 'scripts/legacy/scil_concatenate_dwi.py' 2024-04-23T22:41:40,880 adding 'scripts/legacy/scil_convert_fdf.py' 2024-04-23T22:41:40,882 adding 'scripts/legacy/scil_convert_gradients_fsl_to_mrtrix.py' 2024-04-23T22:41:40,883 adding 'scripts/legacy/scil_convert_gradients_mrtrix_to_fsl.py' 2024-04-23T22:41:40,884 adding 'scripts/legacy/scil_convert_json_to_xlsx.py' 2024-04-23T22:41:40,885 adding 'scripts/legacy/scil_convert_rgb.py' 2024-04-23T22:41:40,886 adding 'scripts/legacy/scil_convert_sh_basis.py' 2024-04-23T22:41:40,888 adding 'scripts/legacy/scil_convert_surface.py' 2024-04-23T22:41:40,889 adding 'scripts/legacy/scil_convert_tensors.py' 2024-04-23T22:41:40,890 adding 'scripts/legacy/scil_convert_tractogram.py' 2024-04-23T22:41:40,891 adding 'scripts/legacy/scil_count_non_zero_voxels.py' 2024-04-23T22:41:40,892 adding 'scripts/legacy/scil_count_streamlines.py' 2024-04-23T22:41:40,894 adding 'scripts/legacy/scil_crop_volume.py' 2024-04-23T22:41:40,895 adding 'scripts/legacy/scil_cut_streamlines.py' 2024-04-23T22:41:40,896 adding 'scripts/legacy/scil_decompose_connectivity.py' 2024-04-23T22:41:40,897 adding 'scripts/legacy/scil_detect_dwi_volume_outliers.py' 2024-04-23T22:41:40,898 adding 'scripts/legacy/scil_detect_streamlines_loops.py' 2024-04-23T22:41:40,899 adding 'scripts/legacy/scil_dilate_labels.py' 2024-04-23T22:41:40,901 adding 'scripts/legacy/scil_estimate_bundles_diameter.py' 2024-04-23T22:41:40,902 adding 'scripts/legacy/scil_evaluate_bundles_binary_classification_measures.py' 2024-04-23T22:41:40,903 adding 'scripts/legacy/scil_evaluate_bundles_individual_measures.py' 2024-04-23T22:41:40,904 adding 'scripts/legacy/scil_evaluate_bundles_pairwise_agreement_measures.py' 2024-04-23T22:41:40,905 adding 'scripts/legacy/scil_evaluate_connectivity_graph_measures.py' 2024-04-23T22:41:40,907 adding 'scripts/legacy/scil_evaluate_connectivity_pairwise_agreement_measures.py' 2024-04-23T22:41:40,908 adding 'scripts/legacy/scil_execute_angle_aware_bilateral_filtering.py' 2024-04-23T22:41:40,909 adding 'scripts/legacy/scil_execute_asymmetric_filtering.py' 2024-04-23T22:41:40,910 adding 'scripts/legacy/scil_extract_b0.py' 2024-04-23T22:41:40,911 adding 'scripts/legacy/scil_extract_dwi_shell.py' 2024-04-23T22:41:40,913 adding 'scripts/legacy/scil_extract_ushape.py' 2024-04-23T22:41:40,914 adding 'scripts/legacy/scil_filter_connectivity.py' 2024-04-23T22:41:40,915 adding 'scripts/legacy/scil_filter_streamlines_by_length.py' 2024-04-23T22:41:40,916 adding 'scripts/legacy/scil_filter_streamlines_by_orientation.py' 2024-04-23T22:41:40,917 adding 'scripts/legacy/scil_filter_tractogram.py' 2024-04-23T22:41:40,919 adding 'scripts/legacy/scil_filter_tractogram_anatomically.py' 2024-04-23T22:41:40,920 adding 'scripts/legacy/scil_fit_bingham_to_fodf.py' 2024-04-23T22:41:40,921 adding 'scripts/legacy/scil_fix_dsi_studio_trk.py' 2024-04-23T22:41:40,922 adding 'scripts/legacy/scil_flip_gradients.py' 2024-04-23T22:41:40,923 adding 'scripts/legacy/scil_flip_streamlines.py' 2024-04-23T22:41:40,924 adding 'scripts/legacy/scil_flip_surface.py' 2024-04-23T22:41:40,926 adding 'scripts/legacy/scil_flip_volume.py' 2024-04-23T22:41:40,927 adding 'scripts/legacy/scil_generate_gradient_sampling.py' 2024-04-23T22:41:40,928 adding 'scripts/legacy/scil_generate_priors_from_bundle.py' 2024-04-23T22:41:40,930 adding 'scripts/legacy/scil_group_comparison.py' 2024-04-23T22:41:40,931 adding 'scripts/legacy/scil_harmonize_json.py' 2024-04-23T22:41:40,932 adding 'scripts/legacy/scil_image_math.py' 2024-04-23T22:41:40,933 adding 'scripts/legacy/scil_merge_json.py' 2024-04-23T22:41:40,935 adding 'scripts/legacy/scil_merge_sh.py' 2024-04-23T22:41:40,936 adding 'scripts/legacy/scil_normalize_connectivity.py' 2024-04-23T22:41:40,937 adding 'scripts/legacy/scil_outlier_rejection.py' 2024-04-23T22:41:40,938 adding 'scripts/legacy/scil_perform_majority_vote.py' 2024-04-23T22:41:40,939 adding 'scripts/legacy/scil_plot_mean_std_per_point.py' 2024-04-23T22:41:40,940 adding 'scripts/legacy/scil_prepare_eddy_command.py' 2024-04-23T22:41:40,941 adding 'scripts/legacy/scil_prepare_topup_command.py' 2024-04-23T22:41:40,943 adding 'scripts/legacy/scil_print_connectivity_filenames.py' 2024-04-23T22:41:40,944 adding 'scripts/legacy/scil_print_header.py' 2024-04-23T22:41:40,945 adding 'scripts/legacy/scil_project_streamlines_to_map.py' 2024-04-23T22:41:40,946 adding 'scripts/legacy/scil_recognize_multi_bundles.py' 2024-04-23T22:41:40,947 adding 'scripts/legacy/scil_recognize_single_bundle.py' 2024-04-23T22:41:40,949 adding 'scripts/legacy/scil_register_tractogram.py' 2024-04-23T22:41:40,950 adding 'scripts/legacy/scil_remove_invalid_streamlines.py' 2024-04-23T22:41:40,951 adding 'scripts/legacy/scil_remove_labels.py' 2024-04-23T22:41:40,952 adding 'scripts/legacy/scil_remove_outliers_ransac.py' 2024-04-23T22:41:40,953 adding 'scripts/legacy/scil_reorder_connectivity.py' 2024-04-23T22:41:40,954 adding 'scripts/legacy/scil_reorder_dwi_philips.py' 2024-04-23T22:41:40,956 adding 'scripts/legacy/scil_resample_bvals.py' 2024-04-23T22:41:40,957 adding 'scripts/legacy/scil_resample_streamlines.py' 2024-04-23T22:41:40,958 adding 'scripts/legacy/scil_resample_tractogram.py' 2024-04-23T22:41:40,959 adding 'scripts/legacy/scil_resample_volume.py' 2024-04-23T22:41:40,960 adding 'scripts/legacy/scil_reshape_to_reference.py' 2024-04-23T22:41:40,961 adding 'scripts/legacy/scil_run_commit.py' 2024-04-23T22:41:40,963 adding 'scripts/legacy/scil_run_nlmeans.py' 2024-04-23T22:41:40,964 adding 'scripts/legacy/scil_save_connections_from_hdf5.py' 2024-04-23T22:41:40,965 adding 'scripts/legacy/scil_score_bundles.py' 2024-04-23T22:41:40,966 adding 'scripts/legacy/scil_score_tractogram.py' 2024-04-23T22:41:40,968 adding 'scripts/legacy/scil_screenshot_bundle.py' 2024-04-23T22:41:40,969 adding 'scripts/legacy/scil_screenshot_dti.py' 2024-04-23T22:41:40,970 adding 'scripts/legacy/scil_screenshot_volume.py' 2024-04-23T22:41:40,971 adding 'scripts/legacy/scil_screenshot_volume_mosaic_overlap.py' 2024-04-23T22:41:40,972 adding 'scripts/legacy/scil_set_response_function.py' 2024-04-23T22:41:40,973 adding 'scripts/legacy/scil_shuffle_streamlines.py' 2024-04-23T22:41:40,975 adding 'scripts/legacy/scil_smooth_streamlines.py' 2024-04-23T22:41:40,976 adding 'scripts/legacy/scil_smooth_surface.py' 2024-04-23T22:41:40,977 adding 'scripts/legacy/scil_snr_in_roi.py' 2024-04-23T22:41:40,978 adding 'scripts/legacy/scil_split_image.py' 2024-04-23T22:41:40,979 adding 'scripts/legacy/scil_split_tractogram.py' 2024-04-23T22:41:40,981 adding 'scripts/legacy/scil_split_volume_by_ids.py' 2024-04-23T22:41:40,982 adding 'scripts/legacy/scil_split_volume_by_labels.py' 2024-04-23T22:41:40,983 adding 'scripts/legacy/scil_streamlines_math.py' 2024-04-23T22:41:40,984 adding 'scripts/legacy/scil_swap_gradient_axis.py' 2024-04-23T22:41:40,985 adding 'scripts/legacy/scil_uniformize_streamlines_endpoints.py' 2024-04-23T22:41:40,987 adding 'scripts/legacy/scil_validate_and_correct_bvecs.py' 2024-04-23T22:41:40,988 adding 'scripts/legacy/scil_validate_and_correct_eddy_gradients.py' 2024-04-23T22:41:40,989 adding 'scripts/legacy/scil_validate_bids.py' 2024-04-23T22:41:40,990 adding 'scripts/legacy/scil_verify_space_attributes_compatibility.py' 2024-04-23T22:41:40,992 adding 'scripts/legacy/scil_visualize_bingham_fit.py' 2024-04-23T22:41:40,993 adding 'scripts/legacy/scil_visualize_bundles.py' 2024-04-23T22:41:40,994 adding 'scripts/legacy/scil_visualize_bundles_mosaic.py' 2024-04-23T22:41:40,995 adding 'scripts/legacy/scil_visualize_connectivity.py' 2024-04-23T22:41:40,996 adding 'scripts/legacy/scil_visualize_fodf.py' 2024-04-23T22:41:40,997 adding 'scripts/legacy/scil_visualize_gradients.py' 2024-04-23T22:41:40,999 adding 'scripts/legacy/scil_visualize_histogram.py' 2024-04-23T22:41:41,000 adding 'scripts/legacy/scil_visualize_scatterplot.py' 2024-04-23T22:41:41,001 adding 'scripts/legacy/scil_visualize_seeds.py' 2024-04-23T22:41:41,002 adding 'scripts/legacy/scil_visualize_seeds_3d.py' 2024-04-23T22:41:41,007 adding 'scripts/tests/__init__.py' 2024-04-23T22:41:41,008 adding 'scripts/tests/test_NODDI_maps.py' 2024-04-23T22:41:41,010 adding 'scripts/tests/test_NODDI_priors.py' 2024-04-23T22:41:41,011 adding 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adding 'scripts/tests/test_dwi_concatenate.py' 2024-04-23T22:41:41,060 adding 'scripts/tests/test_dwi_convert_FDF.py' 2024-04-23T22:41:41,062 adding 'scripts/tests/test_dwi_detect_volume_outliers.py' 2024-04-23T22:41:41,063 adding 'scripts/tests/test_dwi_extract_b0.py' 2024-04-23T22:41:41,064 adding 'scripts/tests/test_dwi_extract_shell.py' 2024-04-23T22:41:41,065 adding 'scripts/tests/test_dwi_powder_average.py' 2024-04-23T22:41:41,066 adding 'scripts/tests/test_dwi_prepare_eddy_command.py' 2024-04-23T22:41:41,068 adding 'scripts/tests/test_dwi_prepare_topup_command.py' 2024-04-23T22:41:41,069 adding 'scripts/tests/test_dwi_reorder_philips.py' 2024-04-23T22:41:41,070 adding 'scripts/tests/test_dwi_split_by_indices.py' 2024-04-23T22:41:41,071 adding 'scripts/tests/test_dwi_to_sh.py' 2024-04-23T22:41:41,072 adding 'scripts/tests/test_fodf_max_in_ventricles.py' 2024-04-23T22:41:41,074 adding 'scripts/tests/test_fodf_memsmt.py' 2024-04-23T22:41:41,075 adding 'scripts/tests/test_fodf_metrics.py' 2024-04-23T22:41:41,076 adding 'scripts/tests/test_fodf_msmt.py' 2024-04-23T22:41:41,078 adding 'scripts/tests/test_fodf_ssst.py' 2024-04-23T22:41:41,079 adding 'scripts/tests/test_fodf_to_bingham.py' 2024-04-23T22:41:41,080 adding 'scripts/tests/test_freewater_maps.py' 2024-04-23T22:41:41,081 adding 'scripts/tests/test_freewater_priors.py' 2024-04-23T22:41:41,083 adding 'scripts/tests/test_frf_mean.py' 2024-04-23T22:41:41,084 adding 'scripts/tests/test_frf_memsmt.py' 2024-04-23T22:41:41,085 adding 'scripts/tests/test_frf_msmt.py' 2024-04-23T22:41:41,088 adding 'scripts/tests/test_frf_set_diffusivities.py' 2024-04-23T22:41:41,089 adding 'scripts/tests/test_frf_ssst.py' 2024-04-23T22:41:41,090 adding 'scripts/tests/test_gradients_apply_transform.py' 2024-04-23T22:41:41,092 adding 'scripts/tests/test_gradients_convert.py' 2024-04-23T22:41:41,093 adding 'scripts/tests/test_gradients_generate_sampling.py' 2024-04-23T22:41:41,094 adding 'scripts/tests/test_gradients_modify_axes.py' 2024-04-23T22:41:41,095 adding 'scripts/tests/test_gradients_round_bvals.py' 2024-04-23T22:41:41,096 adding 'scripts/tests/test_gradients_validate_correct.py' 2024-04-23T22:41:41,098 adding 'scripts/tests/test_gradients_validate_correct_eddy.py' 2024-04-23T22:41:41,099 adding 'scripts/tests/test_header_print_info.py' 2024-04-23T22:41:41,100 adding 'scripts/tests/test_header_validate_compatibility.py' 2024-04-23T22:41:41,101 adding 'scripts/tests/test_json_convert_entries_to_xlsx.py' 2024-04-23T22:41:41,102 adding 'scripts/tests/test_json_harmonize_entries.py' 2024-04-23T22:41:41,104 adding 'scripts/tests/test_json_merge_entries.py' 2024-04-23T22:41:41,105 adding 'scripts/tests/test_labels_combine.py' 2024-04-23T22:41:41,106 adding 'scripts/tests/test_labels_dilate.py' 2024-04-23T22:41:41,107 adding 'scripts/tests/test_labels_remove.py' 2024-04-23T22:41:41,109 adding 'scripts/tests/test_labels_split_volume_by_ids.py' 2024-04-23T22:41:41,110 adding 'scripts/tests/test_labels_split_volume_from_lut.py' 2024-04-23T22:41:41,111 adding 'scripts/tests/test_lesions_info.py' 2024-04-23T22:41:41,112 adding 'scripts/tests/test_mti_adjust_B1_header.py' 2024-04-23T22:41:41,114 adding 'scripts/tests/test_mti_maps_MT.py' 2024-04-23T22:41:41,115 adding 'scripts/tests/test_mti_maps_ihMT.py' 2024-04-23T22:41:41,117 adding 'scripts/tests/test_plot_stats_per_point.py' 2024-04-23T22:41:41,118 adding 'scripts/tests/test_qball_metrics.py' 2024-04-23T22:41:41,119 adding 'scripts/tests/test_rgb_convert.py' 2024-04-23T22:41:41,120 adding 'scripts/tests/test_search_keywords.py' 2024-04-23T22:41:41,122 adding 'scripts/tests/test_sh_convert.py' 2024-04-23T22:41:41,123 adding 'scripts/tests/test_sh_fusion.py' 2024-04-23T22:41:41,124 adding 'scripts/tests/test_sh_to_aodf.py' 2024-04-23T22:41:41,125 adding 'scripts/tests/test_sh_to_rish.py' 2024-04-23T22:41:41,127 adding 'scripts/tests/test_sh_to_sf.py' 2024-04-23T22:41:41,128 adding 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'scripts/tests/test_tractogram_assign_uniform_color.py' 2024-04-23T22:41:41,145 adding 'scripts/tests/test_tractogram_commit.py' 2024-04-23T22:41:41,147 adding 'scripts/tests/test_tractogram_compress.py' 2024-04-23T22:41:41,148 adding 'scripts/tests/test_tractogram_compute_TODI.py' 2024-04-23T22:41:41,149 adding 'scripts/tests/test_tractogram_compute_density_map.py' 2024-04-23T22:41:41,150 adding 'scripts/tests/test_tractogram_convert.py' 2024-04-23T22:41:41,152 adding 'scripts/tests/test_tractogram_convert_hdf5_to_trk.py' 2024-04-23T22:41:41,153 adding 'scripts/tests/test_tractogram_count_streamlines.py' 2024-04-23T22:41:41,154 adding 'scripts/tests/test_tractogram_cut_streamlines.py' 2024-04-23T22:41:41,155 adding 'scripts/tests/test_tractogram_detect_loops.py' 2024-04-23T22:41:41,157 adding 'scripts/tests/test_tractogram_dpp_math.py' 2024-04-23T22:41:41,158 adding 'scripts/tests/test_tractogram_extract_ushape.py' 2024-04-23T22:41:41,159 adding 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'scripts/tests/test_tractogram_register.py' 2024-04-23T22:41:41,176 adding 'scripts/tests/test_tractogram_remove_invalid.py' 2024-04-23T22:41:41,177 adding 'scripts/tests/test_tractogram_resample.py' 2024-04-23T22:41:41,178 adding 'scripts/tests/test_tractogram_resample_nb_points.py' 2024-04-23T22:41:41,179 adding 'scripts/tests/test_tractogram_seed_density_map.py' 2024-04-23T22:41:41,181 adding 'scripts/tests/test_tractogram_segment_and_score.py' 2024-04-23T22:41:41,182 adding 'scripts/tests/test_tractogram_segment_bundles.py' 2024-04-23T22:41:41,184 adding 'scripts/tests/test_tractogram_segment_bundles_for_connectivity.py' 2024-04-23T22:41:41,185 adding 'scripts/tests/test_tractogram_segment_one_bundles.py' 2024-04-23T22:41:41,186 adding 'scripts/tests/test_tractogram_shuffle.py' 2024-04-23T22:41:41,187 adding 'scripts/tests/test_tractogram_smooth.py' 2024-04-23T22:41:41,189 adding 'scripts/tests/test_tractogram_split.py' 2024-04-23T22:41:41,190 adding 'scripts/tests/test_tractogram_uniformize_endpoints.py' 2024-04-23T22:41:41,191 adding 'scripts/tests/test_viz_bingham_fit.py' 2024-04-23T22:41:41,192 adding 'scripts/tests/test_viz_bundle.py' 2024-04-23T22:41:41,193 adding 'scripts/tests/test_viz_bundle_screenshot_mni.py' 2024-04-23T22:41:41,195 adding 'scripts/tests/test_viz_bundle_screenshot_mosaic.py' 2024-04-23T22:41:41,196 adding 'scripts/tests/test_viz_connectivity.py' 2024-04-23T22:41:41,197 adding 'scripts/tests/test_viz_dti_screenshot.py' 2024-04-23T22:41:41,198 adding 'scripts/tests/test_viz_fodf.py' 2024-04-23T22:41:41,199 adding 'scripts/tests/test_viz_gradients_screenshot.py' 2024-04-23T22:41:41,200 adding 'scripts/tests/test_viz_tractogram_seeds.py' 2024-04-23T22:41:41,202 adding 'scripts/tests/test_viz_tractogram_seeds_3d.py' 2024-04-23T22:41:41,203 adding 'scripts/tests/test_viz_volume_histogram.py' 2024-04-23T22:41:41,204 adding 'scripts/tests/test_viz_volume_scatterplot.py' 2024-04-23T22:41:41,205 adding 'scripts/tests/test_viz_volume_screenshot.py' 2024-04-23T22:41:41,207 adding 'scripts/tests/test_viz_volume_screenshot_mosaic.py' 2024-04-23T22:41:41,208 adding 'scripts/tests/test_volume_apply_transform.py' 2024-04-23T22:41:41,209 adding 'scripts/tests/test_volume_b0_synthesis.py' 2024-04-23T22:41:41,210 adding 'scripts/tests/test_volume_count_non_zero_voxels.py' 2024-04-23T22:41:41,211 adding 'scripts/tests/test_volume_crop.py' 2024-04-23T22:41:41,213 adding 'scripts/tests/test_volume_flip.py' 2024-04-23T22:41:41,214 adding 'scripts/tests/test_volume_math.py' 2024-04-23T22:41:41,215 adding 'scripts/tests/test_volume_remove_outliers_ransac.py' 2024-04-23T22:41:41,216 adding 'scripts/tests/test_volume_resample.py' 2024-04-23T22:41:41,218 adding 'scripts/tests/test_volume_reshape_to_reference.py' 2024-04-23T22:41:41,219 adding 'scripts/tests/test_volume_stats_in_ROI.py' 2024-04-23T22:41:41,220 adding 'scripts/tests/test_volume_stats_in_labels.py' 2024-04-23T22:41:41,221 adding 'scilpy-2.0.0.dist-info/LICENSE' 2024-04-23T22:41:41,223 adding 'scilpy-2.0.0.dist-info/METADATA' 2024-04-23T22:41:41,223 adding 'scilpy-2.0.0.dist-info/WHEEL' 2024-04-23T22:41:41,226 adding 'scilpy-2.0.0.dist-info/entry_points.txt' 2024-04-23T22:41:41,227 adding 'scilpy-2.0.0.dist-info/top_level.txt' 2024-04-23T22:41:41,238 adding 'scilpy-2.0.0.dist-info/RECORD' 2024-04-23T22:41:41,276 removing build/bdist.linux-armv7l/wheel 2024-04-23T22:41:42,146 Building wheel for scilpy (setup.py): finished with status 'done' 2024-04-23T22:41:42,173 Created wheel for scilpy: filename=scilpy-2.0.0-cp39-cp39-linux_armv7l.whl size=2341184 sha256=93daca21f00b9d93f3014b04fd463f5ab153990aaf078601f80d57bf047c2f3c 2024-04-23T22:41:42,174 Stored in directory: /tmp/pip-ephem-wheel-cache-xsn6o8nt/wheels/d0/b0/3a/4c394aaaf5bd58bda47915fd4d9e3aff7f1695e1c9beaff64f 2024-04-23T22:41:42,206 Successfully built scilpy 2024-04-23T22:41:42,268 Removed build tracker: '/tmp/pip-build-tracker-zaxztdx8'