2024-04-28T23:31:22,303 Created temporary directory: /tmp/pip-build-tracker-wfrdo3tm
2024-04-28T23:31:22,304 Initialized build tracking at /tmp/pip-build-tracker-wfrdo3tm
2024-04-28T23:31:22,305 Created build tracker: /tmp/pip-build-tracker-wfrdo3tm
2024-04-28T23:31:22,305 Entered build tracker: /tmp/pip-build-tracker-wfrdo3tm
2024-04-28T23:31:22,306 Created temporary directory: /tmp/pip-wheel-6biwxz10
2024-04-28T23:31:22,309 Created temporary directory: /tmp/pip-ephem-wheel-cache-87aye8ko
2024-04-28T23:31:22,331 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-04-28T23:31:22,335 2 location(s) to search for versions of sigprofilermatrixgenerator:
2024-04-28T23:31:22,335 * https://pypi.org/simple/sigprofilermatrixgenerator/
2024-04-28T23:31:22,335 * https://www.piwheels.org/simple/sigprofilermatrixgenerator/
2024-04-28T23:31:22,335 Fetching project page and analyzing links: https://pypi.org/simple/sigprofilermatrixgenerator/
2024-04-28T23:31:22,336 Getting page https://pypi.org/simple/sigprofilermatrixgenerator/
2024-04-28T23:31:22,338 Found index url https://pypi.org/simple/
2024-04-28T23:31:22,554 Fetched page https://pypi.org/simple/sigprofilermatrixgenerator/ as application/vnd.pypi.simple.v1+json
2024-04-28T23:31:22,580   Found link https://files.pythonhosted.org/packages/c7/6a/28ddff4162d24d6994148c515057e5bfc71bb0183721f1ca875f6cc3c98a/SigProfilerMatrixGenerator-0.1.1.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.1
2024-04-28T23:31:22,581   Found link https://files.pythonhosted.org/packages/09/e0/a27c3a87eaa67985ed16425b07c6d0dbb9f2ed0bb370964a5eea8be9dc91/SigProfilerMatrixGenerator-0.1.2.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.2
2024-04-28T23:31:22,581   Found link https://files.pythonhosted.org/packages/bd/dd/b943503008f3dcda163b33e9402f52439b23c6b036cb328bcd37d6e7d010/SigProfilerMatrixGenerator-0.1.3.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.3
2024-04-28T23:31:22,582   Found link https://files.pythonhosted.org/packages/18/52/e8df4d5c50b73bee8f9ac77f5b30e1706176258c27c9ef81b20f467e3f60/SigProfilerMatrixGenerator-0.1.4.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.4
2024-04-28T23:31:22,583   Found link https://files.pythonhosted.org/packages/17/7b/f57ee232ba6fd2a0c0d49ce3777af69dea21e0ef979664825fbfd6e15d72/SigProfilerMatrixGenerator-0.1.5.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.5
2024-04-28T23:31:22,584   Found link https://files.pythonhosted.org/packages/7d/ea/fcb33c23e6653c3c50d6b438eb03cba08321e36d245b0642e4f4f29facd9/SigProfilerMatrixGenerator-0.1.6.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.6
2024-04-28T23:31:22,584   Found link https://files.pythonhosted.org/packages/f4/a3/770fcf7b2863289ff8d37137be8acc20995c64664d47dcd110dcaa8eedfb/SigProfilerMatrixGenerator-0.1.7.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.7
2024-04-28T23:31:22,585   Found link https://files.pythonhosted.org/packages/a9/0c/ae900daf1713185f851a882aafab8dbdf75cdd979fac87ac8b028ea3228e/SigProfilerMatrixGenerator-0.1.8.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.8
2024-04-28T23:31:22,586   Found link https://files.pythonhosted.org/packages/f9/58/915584f3317f44676353a359f2a91956fe9a1b4a7347487c0a6fe557b662/SigProfilerMatrixGenerator-0.1.9.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.9
2024-04-28T23:31:22,587   Found link https://files.pythonhosted.org/packages/e6/3a/9de0d7a6d81bcd6cf9386555aa3d0c8d9976927c066c9d05ce90fcc35f49/SigProfilerMatrixGenerator-0.1.10.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.10
2024-04-28T23:31:22,587   Found link https://files.pythonhosted.org/packages/a1/1f/2e6637742e6d3ef7aa0c36a946495fa8735826daadb50ae1939c6509bcb8/SigProfilerMatrixGenerator-0.1.11.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.11
2024-04-28T23:31:22,588   Found link https://files.pythonhosted.org/packages/9c/b9/5145722e31781332e84eba772a625e97101c77ac297e3f1c61384cee8f93/SigProfilerMatrixGenerator-0.1.12.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.12
2024-04-28T23:31:22,589   Found link https://files.pythonhosted.org/packages/56/03/e9e9b0dd8a36620b30677a94c2966d625c077727ab3c7c5ce657b75ddab1/SigProfilerMatrixGenerator-0.1.13.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.13
2024-04-28T23:31:22,590   Found link https://files.pythonhosted.org/packages/34/fc/a637b67b91bbc04cddaed487535962978a25e50face12c79da107a72e643/SigProfilerMatrixGenerator-0.1.14.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.14
2024-04-28T23:31:22,590   Found link https://files.pythonhosted.org/packages/be/d6/3678d80d2770647ee4ee99d672562fbe83e2ddebe4021ffdbe951410981e/SigProfilerMatrixGenerator-0.1.15.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.15
2024-04-28T23:31:22,591   Found link https://files.pythonhosted.org/packages/8f/46/07527d1d65dcad2f18876682b403ee40b8712a876894770519091819a94b/SigProfilerMatrixGenerator-0.1.16.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.16
2024-04-28T23:31:22,592   Found link https://files.pythonhosted.org/packages/0a/6f/fb786541b30b112da6f35604558b88f29adfd37b322e1bb477ead17ee013/SigProfilerMatrixGenerator-0.1.17.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.17
2024-04-28T23:31:22,592   Found link https://files.pythonhosted.org/packages/4c/be/499843893df4d02c0bdb5792039b9f550b358513fab7e252dc758fe461ab/SigProfilerMatrixGenerator-0.1.18.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.18
2024-04-28T23:31:22,593   Found link https://files.pythonhosted.org/packages/ce/31/b2b1bcda58e24b3a8c725477a0e1a6f41b0e9285741103f5deeb69bd0d04/SigProfilerMatrixGenerator-0.1.19.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.19
2024-04-28T23:31:22,593   Found link https://files.pythonhosted.org/packages/e1/21/fd9805121c089baa2223948e25ec2af1e8fdcde7544e433869740f1c0538/SigProfilerMatrixGenerator-0.1.20.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.20
2024-04-28T23:31:22,594   Found link https://files.pythonhosted.org/packages/9a/50/979cb4ca33ddd93a69ea767d17e17456f37f4466a7ba8f282ee55168c790/SigProfilerMatrixGenerator-0.1.21.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.21
2024-04-28T23:31:22,595   Found link https://files.pythonhosted.org/packages/e7/4b/f33f7d0898286be90c3db156863fafcde4e5e8f2ca4aef92e7c6f7424980/SigProfilerMatrixGenerator-0.1.22.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.22
2024-04-28T23:31:22,595   Found link https://files.pythonhosted.org/packages/c0/19/bfb595b2593be0eb945d196e1689714aade50c5ec43e96a351419579e18d/SigProfilerMatrixGenerator-0.1.23.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.23
2024-04-28T23:31:22,596   Found link https://files.pythonhosted.org/packages/e8/1c/7efb25df28e11476adad1e8cea8a2d8462d183175c7d4be29415fed872f3/SigProfilerMatrixGenerator-0.1.25.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 0.1.25
2024-04-28T23:31:22,597   Found link https://files.pythonhosted.org/packages/48/ca/6df1d33d4c0325190b09c0b2ff257cd46a97fe2b7136115a4ff5b1bcbb6d/SigProfilerMatrixGenerator-1.0.0.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.0
2024-04-28T23:31:22,598   Found link https://files.pythonhosted.org/packages/ae/1f/730357fb22484d14eb0cfe72e81962c2cfedf90cca75d94c6e1f88afb7b5/SigProfilerMatrixGenerator-1.0.1.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.1
2024-04-28T23:31:22,598   Found link https://files.pythonhosted.org/packages/8a/e3/1fc8743ee3078227377531039541b21553ab56fdc9914089aecaad18b218/SigProfilerMatrixGenerator-1.0.2.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.2
2024-04-28T23:31:22,599   Found link https://files.pythonhosted.org/packages/b3/89/6c10ccc120647b2b8a3ff3be7e12c8f0a7d3bbb648728a30e50a641fc5a2/SigProfilerMatrixGenerator-1.0.4.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.4
2024-04-28T23:31:22,600   Found link https://files.pythonhosted.org/packages/16/56/3e1fe788f9089baf807f1181061d68c19b0a3b4aa27cadedf86ffada0d6c/SigProfilerMatrixGenerator-1.0.5.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.5
2024-04-28T23:31:22,600   Found link https://files.pythonhosted.org/packages/31/23/bc67851b0fa5539bdb1528045700da2410ebbd4f771e493f7b5f17155365/SigProfilerMatrixGenerator-1.0.6.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.6
2024-04-28T23:31:22,601   Found link https://files.pythonhosted.org/packages/37/5e/7930da2d209c5944aae45447a8729c85958682f91ab8c5d2bca18ffcfab8/SigProfilerMatrixGenerator-1.0.7.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.7
2024-04-28T23:31:22,602   Found link https://files.pythonhosted.org/packages/12/c2/a1f85e85501667941a77de4751cd124173bb7dd6b37e5603d6818fbfa9ba/SigProfilerMatrixGenerator-1.0.8.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.8
2024-04-28T23:31:22,602   Found link https://files.pythonhosted.org/packages/68/8c/7923d4db4e08bbb467d66495f821f17ab2bed7e25b005b7fc153e2d08540/SigProfilerMatrixGenerator-1.0.9.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.9
2024-04-28T23:31:22,603   Found link https://files.pythonhosted.org/packages/57/3b/92569f53b63e6556dd46fcc514202e865878d7cb3b73f9481730d683f41c/SigProfilerMatrixGenerator-1.0.10.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.10
2024-04-28T23:31:22,603   Found link https://files.pythonhosted.org/packages/f7/4e/0d43742effcd43be3c8d865026b32017fa1407a6148bc0011dc4a8683509/SigProfilerMatrixGenerator-1.0.11.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.11
2024-04-28T23:31:22,604   Found link https://files.pythonhosted.org/packages/21/2e/5b81999306f02c711b74ce4c88a3725efb6502ce87b031a95e7f432715d2/SigProfilerMatrixGenerator-1.0.12.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.12
2024-04-28T23:31:22,604   Found link https://files.pythonhosted.org/packages/a6/ca/ec6bb5899fb7f42110102afa2636d04710b917e755b6b80fdef21e80c090/SigProfilerMatrixGenerator-1.0.13.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.13
2024-04-28T23:31:22,605   Found link https://files.pythonhosted.org/packages/aa/5f/9eb3e025425af0a8b4ab4dbd629158b53bdf092ec3ba73d87f5bb5af643a/SigProfilerMatrixGenerator-1.0.14.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.14
2024-04-28T23:31:22,606   Found link https://files.pythonhosted.org/packages/31/e8/5aacb489a0ad39cf892cbc7b91be93ee873e009a28c2ca0fda6ff210f1c2/SigProfilerMatrixGenerator-1.0.15.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.15
2024-04-28T23:31:22,606   Found link https://files.pythonhosted.org/packages/30/5a/62a7b4224b255e639b0177e9ddc719dce52ca0db701382e9c02a3267c1b3/SigProfilerMatrixGenerator-1.0.16.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.16
2024-04-28T23:31:22,607   Found link https://files.pythonhosted.org/packages/25/df/a04f48053469efffed5a2574bfdfd11f2fd6f6250596aebb9207fe5ddbd1/SigProfilerMatrixGenerator-1.0.17.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.17
2024-04-28T23:31:22,608   Found link https://files.pythonhosted.org/packages/e4/81/6e8a9f2c9b4454d8b7df1a2f889d9bfa20786f368469a0082859f9a226e9/SigProfilerMatrixGenerator-1.0.18.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.18
2024-04-28T23:31:22,609   Found link https://files.pythonhosted.org/packages/8c/07/d6e05005a349db7a2c6e33a03926a0dad081882cbd82781095070e5e6dd2/SigProfilerMatrixGenerator-1.0.19.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.19
2024-04-28T23:31:22,609   Found link https://files.pythonhosted.org/packages/e7/20/e149f3195446422925cf948bcc7e5aa8ccd6a89cd673d72aa481b7187e85/SigProfilerMatrixGenerator-1.0.20.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.20
2024-04-28T23:31:22,610   Found link https://files.pythonhosted.org/packages/dc/3f/3a10507445e03d04dcb132d4cf450a510f14076bb9b17284744cd9647cc6/SigProfilerMatrixGenerator-1.0.21.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.21
2024-04-28T23:31:22,611   Found link https://files.pythonhosted.org/packages/96/3f/4486e817c70d7d37084e168c33a8c77159c0cb5c931ab2afea1e771d94ed/SigProfilerMatrixGenerator-1.0.22.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.22
2024-04-28T23:31:22,611   Found link https://files.pythonhosted.org/packages/70/d6/0fb646f64373ff597bfc61020312d9f7ec781718043e5ab9e73348aaa77b/SigProfilerMatrixGenerator-1.0.23.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.23
2024-04-28T23:31:22,612   Found link https://files.pythonhosted.org/packages/cd/df/b2510bad2f657d52cfb18cab3de62b0de6fb7e7cab29bf7fb495eb97c731/SigProfilerMatrixGenerator-1.0.24.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.24
2024-04-28T23:31:22,612   Found link https://files.pythonhosted.org/packages/fc/8c/774f2f6d9f67e6f8c8f03dcdbf21b0ed2e0eb290c362f2bd8472353a3ba1/SigProfilerMatrixGenerator-1.0.25.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.25
2024-04-28T23:31:22,613   Found link https://files.pythonhosted.org/packages/74/e4/0946e6d541ac0b827722eba36fd908c90fd74e859f9bfdc423bd067d3595/SigProfilerMatrixGenerator-1.0.26.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.0.26
2024-04-28T23:31:22,614   Found link https://files.pythonhosted.org/packages/fe/ea/0c801757b97f261a9e4e1a4853a5b8debfff9570b28658ab842966a50e0f/SigProfilerMatrixGenerator-1.1.0.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.0
2024-04-28T23:31:22,614   Found link https://files.pythonhosted.org/packages/9f/b3/bfc2353a925e4adbaa27767e37fcf0df31a68fb78deacff8a52cb7fd7563/SigProfilerMatrixGenerator-1.1.1.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.1
2024-04-28T23:31:22,615   Found link https://files.pythonhosted.org/packages/f3/66/47c778b0e3eb8e486a92ef9449a94c7ca1ed43ff376c848f943dfde7c596/SigProfilerMatrixGenerator-1.1.2.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.2
2024-04-28T23:31:22,616   Found link https://files.pythonhosted.org/packages/d2/b1/9a5769d42d5d513cebb7bce116a823957ee2a49c32e068634c0294cca07c/SigProfilerMatrixGenerator-1.1.3.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.3
2024-04-28T23:31:22,616   Found link https://files.pythonhosted.org/packages/71/5d/0f501a5a374e675476177d0731c9e048ea6cc964902b185beb673849d0f0/SigProfilerMatrixGenerator-1.1.4.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.4
2024-04-28T23:31:22,617   Found link https://files.pythonhosted.org/packages/f7/d8/cf8892155dd3226a6b86df28e91e0ed389d16082d9109ad5ab98c06f6a23/SigProfilerMatrixGenerator-1.1.5.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.5
2024-04-28T23:31:22,618   Found link https://files.pythonhosted.org/packages/e3/69/6197718c5687eddeaf4a4a986aacb83f3eff89e51b70fe8eef4bc4255f8f/SigProfilerMatrixGenerator-1.1.6.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.6
2024-04-28T23:31:22,618   Found link https://files.pythonhosted.org/packages/f2/6f/3c38ca097d04587ea2807d6002783f4b5740cadfbb807d23c80b909aff13/SigProfilerMatrixGenerator-1.1.7.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.7
2024-04-28T23:31:22,619   Found link https://files.pythonhosted.org/packages/bd/48/84e1963975ceab1231f2913efcc3f7cb8cb48fd162e97c70fc1289c3132c/SigProfilerMatrixGenerator-1.1.8.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.8
2024-04-28T23:31:22,620   Found link https://files.pythonhosted.org/packages/23/0d/834403077582d0634f8134dc0356ec1a29901c22fb864cd0c541b1c231ef/SigProfilerMatrixGenerator-1.1.9.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.9
2024-04-28T23:31:22,621   Found link https://files.pythonhosted.org/packages/20/d7/3cc96e6bb315ec5dd52b2063a13d279276df7fe44475388c1c48c156c53c/SigProfilerMatrixGenerator-1.1.10.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.10
2024-04-28T23:31:22,621   Found link https://files.pythonhosted.org/packages/4d/9a/e833c99f878bf981d6c0a0ee6f2e61ffb700943be9135f777df873802444/SigProfilerMatrixGenerator-1.1.11.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.11
2024-04-28T23:31:22,622   Found link https://files.pythonhosted.org/packages/3a/1f/2af2e39b20153ff125e5a5eea041411141ee78935f3e6053be62c33df6e2/SigProfilerMatrixGenerator-1.1.12.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.12
2024-04-28T23:31:22,622   Found link https://files.pythonhosted.org/packages/31/09/67b586235317fb7f025b3958092e21cd4ac78a3e4868099147e5bbecb10d/SigProfilerMatrixGenerator-1.1.13.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.13
2024-04-28T23:31:22,623   Found link https://files.pythonhosted.org/packages/79/07/067208453c3d1bcd2a41356c4b2a108622e92fb0ab136baee5e41fa97114/SigProfilerMatrixGenerator-1.1.14.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.14
2024-04-28T23:31:22,623   Found link https://files.pythonhosted.org/packages/4c/a4/30333e43e27a1de8ed223878e5ac6d6c2ff8ce8462e9e3bb597603bfc06e/SigProfilerMatrixGenerator-1.1.15.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/), version: 1.1.15
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2024-04-28T23:31:22,676   Found link https://files.pythonhosted.org/packages/52/5a/98ba066b8a27697468680c78581756cf788e51a3832d19cb0a7a585825f5/SigProfilerMatrixGenerator-1.2.22.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/) (requires-python:>=3.8), version: 1.2.22
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2024-04-28T23:31:22,677   Found link https://files.pythonhosted.org/packages/ce/97/6591eb6f95af9fee2edd1d9ffa7d547e03b47ad96411da0310cd6743ab0d/SigProfilerMatrixGenerator-1.2.23.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/) (requires-python:>=3.8), version: 1.2.23
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2024-04-28T23:31:22,679   Found link https://files.pythonhosted.org/packages/58/b5/da65fdd2d9a87f232ba95d26ea9a4ea1aca03ef6c0b1b88d095bdd25dc9b/SigProfilerMatrixGenerator-1.2.24.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/) (requires-python:>=3.8), version: 1.2.24
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2024-04-28T23:31:22,680   Found link https://files.pythonhosted.org/packages/c1/ba/79e4acefa0262d69538848d6652420f182041b31f66425ba44cefc95e90e/SigProfilerMatrixGenerator-1.2.25.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/) (requires-python:>=3.8), version: 1.2.25
2024-04-28T23:31:22,681   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://files.pythonhosted.org/packages/a2/90/9f3fb1cdd7c9cace3cfe645e0635f978e9c7ef938301691943e86f2af573/SigProfilerMatrixGenerator-1.2.26-py3-none-any.whl (from https://pypi.org/simple/sigprofilermatrixgenerator/) (requires-python:>=3.8)
2024-04-28T23:31:22,682   Found link https://files.pythonhosted.org/packages/41/60/9933d86ea9e982cd684eff2313cd233fabe06fa9901fa4d16f87c6c9ab92/SigProfilerMatrixGenerator-1.2.26.tar.gz (from https://pypi.org/simple/sigprofilermatrixgenerator/) (requires-python:>=3.8), version: 1.2.26
2024-04-28T23:31:22,683 Fetching project page and analyzing links: https://www.piwheels.org/simple/sigprofilermatrixgenerator/
2024-04-28T23:31:22,684 Getting page https://www.piwheels.org/simple/sigprofilermatrixgenerator/
2024-04-28T23:31:22,685 Found index url https://www.piwheels.org/simple/
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2024-04-28T23:31:23,072   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.2.24-py3-none-any.whl#sha256=9e0524d443426fff2bf3ddf5e3fb1f23fe4ded72a05affe5c75f21c650900404 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/) (requires-python:>=3.8)
2024-04-28T23:31:23,073   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.2.23-py3-none-any.whl#sha256=7c41ef449475fac1937e61b66966c2cec91aa11cc7259d38054144cc63026a63 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/) (requires-python:>=3.8)
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2024-04-28T23:31:23,075   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.2.21-py3-none-any.whl#sha256=1cc34dddc38e5c21256b5faf824f11766cfb053fb043e89598a863a1e764906c (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/) (requires-python:>=3.8)
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2024-04-28T23:31:23,081   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.2.14-py3-none-any.whl#sha256=b1745c37aa47db58b0b5d18e5a8ad109ae44c7f2119ab92507164892ea7afb58 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/) (requires-python:>=3.8)
2024-04-28T23:31:23,082   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.2.13-py3-none-any.whl#sha256=98322ca1bf2cccdf2a8b786dc5e85cd320ebb124784732e970cc0261833a4fc4 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
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2024-04-28T23:31:23,084   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.2.11-py3-none-any.whl#sha256=ae851f1b67e7e4267bc83ba8cf58bbc432eae832dcaf2f6269900b75b116bd18 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
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2024-04-28T23:31:23,125   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.16-py3-none-any.whl#sha256=100c192b85a4e452febaa92098ec7bef89ce1a3dd07ac6d2a4c134b7abaa199e (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-04-28T23:31:23,125   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.15-py3-none-any.whl#sha256=f52a1e1dff6e282bc5a49b52613972622ac649ca0f2800d4fb4f3ca3b17c9b43 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-04-28T23:31:23,126   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.14-py3-none-any.whl#sha256=f93bfaf027250a40f5a13dc4b8e16a997ae6788742493fb3594af6e47f991151 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
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2024-04-28T23:31:23,127   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.12-py3-none-any.whl#sha256=de60346baba774d0687b53278c151d8506a9c77db5f83e20eee115803e1f937e (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
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2024-04-28T23:31:23,128   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.10-py3-none-any.whl#sha256=a3374a0ea0f6391e76c2e4a58b19119849e36144e19cbc002ec70909498af992 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-04-28T23:31:23,129   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-1.0.9-py3-none-any.whl#sha256=6c7633fe9f5a8417bb5091afedd4a769a30b0ab8c614bf4e43e5659197be7f71 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
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2024-04-28T23:31:23,138   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.17-py3-none-any.whl#sha256=ae0861d72d43dec0054d6516d9076cb80508514b36f46150767ab5341333d148 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
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2024-04-28T23:31:23,139   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.15-py3-none-any.whl#sha256=288504536508f749d994d31930658f022b5401332bc810ded63b3cd0a49cef3e (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-04-28T23:31:23,140   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.14-py3-none-any.whl#sha256=35fcddd4e462deee7959573e5e45dfa75d3f2b4ffce81939750a96eedac0b49d (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-04-28T23:31:23,140   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.13-py3-none-any.whl#sha256=fbb27c504c29ed32596c118b00da8aa59f67854e86799b0b330f8a9f2470037a (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-04-28T23:31:23,141   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.12-py3-none-any.whl#sha256=24992b19ac04769baed3433c1b795f09597f608117d9e33c67bf40e474e99e84 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-04-28T23:31:23,142   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.11-py3-none-any.whl#sha256=c3b1761ab13a6dfb85050409e587eff691595bbf3b22248d8e45024792d0873d (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-04-28T23:31:23,142   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.10-py3-none-any.whl#sha256=ee4542b0f7f955e9ed1a2377647dcdfe279cb2f4abb1c9f82f65331a696466e6 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-04-28T23:31:23,143   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.9-py3-none-any.whl#sha256=15e07c22774c555e633b3c7365931ec869749f9e93699b316ad8b88b90e98661 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-04-28T23:31:23,143   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.8-py3-none-any.whl#sha256=f8f015f2654820e23e139b06dad20b2b070c591cf3804c89728031fd465a1761 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-04-28T23:31:23,144   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.7-py3-none-any.whl#sha256=2b7197f9e7546455ecec51a3668c35746722be54000330897cdb3bab16b2846c (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-04-28T23:31:23,145   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.6-py3-none-any.whl#sha256=9bb77768a94a36b84528c72712dcbab7060347122efa53e72efa67f7db5a4c1d (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-04-28T23:31:23,145   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.5-py3-none-any.whl#sha256=3bf26507e0f667a2958c8b58caa1307bf15b8dc11912252798fc227e99e98a0b (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-04-28T23:31:23,146   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.4-py3-none-any.whl#sha256=68f6f2f696d2ada3a780a59862675d42663d7c9e2e10563337ec01ab3e357dff (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-04-28T23:31:23,146   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.3-py3-none-any.whl#sha256=2c8f7184b84f55dd295a9ccbe96ba73b3f8746271bfd3844e25b8204b8df2044 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-04-28T23:31:23,146   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.2-py3-none-any.whl#sha256=a77ce882dc149901406d631720a444648a7acde033b8599373cd1cf50ea132b5 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-04-28T23:31:23,147   Skipping link: No binaries permitted for sigprofilermatrixgenerator: https://www.piwheels.org/simple/sigprofilermatrixgenerator/SigProfilerMatrixGenerator-0.1.1-py3-none-any.whl#sha256=e2a5663dc832700fdb64b22350ca8b0d792920cd1a1ec3cbec1f670ebd911a30 (from https://www.piwheels.org/simple/sigprofilermatrixgenerator/)
2024-04-28T23:31:23,148 Skipping link: not a file: https://www.piwheels.org/simple/sigprofilermatrixgenerator/
2024-04-28T23:31:23,148 Skipping link: not a file: https://pypi.org/simple/sigprofilermatrixgenerator/
2024-04-28T23:31:23,179 Given no hashes to check 1 links for project 'sigprofilermatrixgenerator': discarding no candidates
2024-04-28T23:31:23,198 Collecting sigprofilermatrixgenerator==1.2.26
2024-04-28T23:31:23,201   Created temporary directory: /tmp/pip-unpack-f__xlg_6
2024-04-28T23:31:23,496   Downloading SigProfilerMatrixGenerator-1.2.26.tar.gz (40.3 MB)
2024-04-28T23:31:38,421   Added sigprofilermatrixgenerator==1.2.26 from https://files.pythonhosted.org/packages/41/60/9933d86ea9e982cd684eff2313cd233fabe06fa9901fa4d16f87c6c9ab92/SigProfilerMatrixGenerator-1.2.26.tar.gz to build tracker '/tmp/pip-build-tracker-wfrdo3tm'
2024-04-28T23:31:38,423   Running setup.py (path:/tmp/pip-wheel-6biwxz10/sigprofilermatrixgenerator_ed95f8d832dc4e388ac8e6359049cfab/setup.py) egg_info for package sigprofilermatrixgenerator
2024-04-28T23:31:38,424   Created temporary directory: /tmp/pip-pip-egg-info-9uicdfyy
2024-04-28T23:31:38,425   Preparing metadata (setup.py): started
2024-04-28T23:31:38,426   Running command python setup.py egg_info
2024-04-28T23:31:39,566   running egg_info
2024-04-28T23:31:39,567   creating /tmp/pip-pip-egg-info-9uicdfyy/SigProfilerMatrixGenerator.egg-info
2024-04-28T23:31:39,593   writing /tmp/pip-pip-egg-info-9uicdfyy/SigProfilerMatrixGenerator.egg-info/PKG-INFO
2024-04-28T23:31:39,598   writing dependency_links to /tmp/pip-pip-egg-info-9uicdfyy/SigProfilerMatrixGenerator.egg-info/dependency_links.txt
2024-04-28T23:31:39,599   writing entry points to /tmp/pip-pip-egg-info-9uicdfyy/SigProfilerMatrixGenerator.egg-info/entry_points.txt
2024-04-28T23:31:39,602   writing requirements to /tmp/pip-pip-egg-info-9uicdfyy/SigProfilerMatrixGenerator.egg-info/requires.txt
2024-04-28T23:31:39,603   writing top-level names to /tmp/pip-pip-egg-info-9uicdfyy/SigProfilerMatrixGenerator.egg-info/top_level.txt
2024-04-28T23:31:39,605   writing manifest file '/tmp/pip-pip-egg-info-9uicdfyy/SigProfilerMatrixGenerator.egg-info/SOURCES.txt'
2024-04-28T23:31:39,687   reading manifest file '/tmp/pip-pip-egg-info-9uicdfyy/SigProfilerMatrixGenerator.egg-info/SOURCES.txt'
2024-04-28T23:31:39,689   reading manifest template 'MANIFEST.in'
2024-04-28T23:31:40,001   adding license file 'LICENSE'
2024-04-28T23:31:40,031   writing manifest file '/tmp/pip-pip-egg-info-9uicdfyy/SigProfilerMatrixGenerator.egg-info/SOURCES.txt'
2024-04-28T23:31:40,149   Preparing metadata (setup.py): finished with status 'done'
2024-04-28T23:31:40,153   Source in /tmp/pip-wheel-6biwxz10/sigprofilermatrixgenerator_ed95f8d832dc4e388ac8e6359049cfab has version 1.2.26, which satisfies requirement sigprofilermatrixgenerator==1.2.26 from https://files.pythonhosted.org/packages/41/60/9933d86ea9e982cd684eff2313cd233fabe06fa9901fa4d16f87c6c9ab92/SigProfilerMatrixGenerator-1.2.26.tar.gz
2024-04-28T23:31:40,154   Removed sigprofilermatrixgenerator==1.2.26 from https://files.pythonhosted.org/packages/41/60/9933d86ea9e982cd684eff2313cd233fabe06fa9901fa4d16f87c6c9ab92/SigProfilerMatrixGenerator-1.2.26.tar.gz from build tracker '/tmp/pip-build-tracker-wfrdo3tm'
2024-04-28T23:31:40,160 Created temporary directory: /tmp/pip-unpack-iq0oil2k
2024-04-28T23:31:40,161 Created temporary directory: /tmp/pip-unpack-13gu6ump
2024-04-28T23:31:40,181 Building wheels for collected packages: sigprofilermatrixgenerator
2024-04-28T23:31:40,185   Created temporary directory: /tmp/pip-wheel-vd4_4lxn
2024-04-28T23:31:40,185   Building wheel for sigprofilermatrixgenerator (setup.py): started
2024-04-28T23:31:40,186   Destination directory: /tmp/pip-wheel-vd4_4lxn
2024-04-28T23:31:40,187   Running command python setup.py bdist_wheel
2024-04-28T23:31:41,303   running bdist_wheel
2024-04-28T23:31:41,400   running build
2024-04-28T23:31:41,400   running build_py
2024-04-28T23:31:41,427   creating build
2024-04-28T23:31:41,428   creating build/lib
2024-04-28T23:31:41,429   creating build/lib/SigProfilerMatrixGenerator
2024-04-28T23:31:41,430   copying SigProfilerMatrixGenerator/install.py -> build/lib/SigProfilerMatrixGenerator
2024-04-28T23:31:41,432   copying SigProfilerMatrixGenerator/__init__.py -> build/lib/SigProfilerMatrixGenerator
2024-04-28T23:31:41,434   copying SigProfilerMatrixGenerator/test_helpers.py -> build/lib/SigProfilerMatrixGenerator
2024-04-28T23:31:41,436   copying SigProfilerMatrixGenerator/version.py -> build/lib/SigProfilerMatrixGenerator
2024-04-28T23:31:41,437   running egg_info
2024-04-28T23:31:41,494   writing SigProfilerMatrixGenerator.egg-info/PKG-INFO
2024-04-28T23:31:41,498   writing dependency_links to SigProfilerMatrixGenerator.egg-info/dependency_links.txt
2024-04-28T23:31:41,500   writing entry points to SigProfilerMatrixGenerator.egg-info/entry_points.txt
2024-04-28T23:31:41,503   writing requirements to SigProfilerMatrixGenerator.egg-info/requires.txt
2024-04-28T23:31:41,504   writing top-level names to SigProfilerMatrixGenerator.egg-info/top_level.txt
2024-04-28T23:31:41,531   reading manifest file 'SigProfilerMatrixGenerator.egg-info/SOURCES.txt'
2024-04-28T23:31:41,551   reading manifest template 'MANIFEST.in'
2024-04-28T23:31:41,853   adding license file 'LICENSE'
2024-04-28T23:31:41,896   writing manifest file 'SigProfilerMatrixGenerator.egg-info/SOURCES.txt'
2024-04-28T23:31:41,900   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.controllers' is absent from the `packages` configuration.
2024-04-28T23:31:41,901   !!

2024-04-28T23:31:41,902           ********************************************************************************
2024-04-28T23:31:41,902           ############################
2024-04-28T23:31:41,903           # Package would be ignored #
2024-04-28T23:31:41,903           ############################
2024-04-28T23:31:41,904           Python recognizes 'SigProfilerMatrixGenerator.controllers' as an importable package[^1],
2024-04-28T23:31:41,904           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:41,905           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:41,905           package, please make sure that 'SigProfilerMatrixGenerator.controllers' is explicitly added
2024-04-28T23:31:41,906           to the `packages` configuration field.

2024-04-28T23:31:41,906           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:41,907           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:41,907           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:41,908           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:41,909           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:41,910           If you don't want 'SigProfilerMatrixGenerator.controllers' to be distributed and are
2024-04-28T23:31:41,911           already explicitly excluding 'SigProfilerMatrixGenerator.controllers' via
2024-04-28T23:31:41,911           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:41,911           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:41,912           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:41,913           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:41,914           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:41,916           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:41,917                 even if it does not contain any `.py` files.
2024-04-28T23:31:41,917                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:41,918                 directory, all directories are treated like packages.
2024-04-28T23:31:41,918           ********************************************************************************

2024-04-28T23:31:41,919   !!
2024-04-28T23:31:41,920     check.warn(importable)
2024-04-28T23:31:41,920   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.CNV' is absent from the `packages` configuration.
2024-04-28T23:31:41,921   !!

2024-04-28T23:31:41,922           ********************************************************************************
2024-04-28T23:31:41,922           ############################
2024-04-28T23:31:41,923           # Package would be ignored #
2024-04-28T23:31:41,923           ############################
2024-04-28T23:31:41,924           Python recognizes 'SigProfilerMatrixGenerator.references.CNV' as an importable package[^1],
2024-04-28T23:31:41,924           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:41,925           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:41,926           package, please make sure that 'SigProfilerMatrixGenerator.references.CNV' is explicitly added
2024-04-28T23:31:41,927           to the `packages` configuration field.

2024-04-28T23:31:41,928           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:41,928           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:41,929           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:41,930           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:41,931           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:41,932           If you don't want 'SigProfilerMatrixGenerator.references.CNV' to be distributed and are
2024-04-28T23:31:41,932           already explicitly excluding 'SigProfilerMatrixGenerator.references.CNV' via
2024-04-28T23:31:41,933           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:41,933           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:41,934           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:41,934           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:41,935           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:41,936           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:41,936                 even if it does not contain any `.py` files.
2024-04-28T23:31:41,937                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:41,937                 directory, all directories are treated like packages.
2024-04-28T23:31:41,938           ********************************************************************************

2024-04-28T23:31:41,938   !!
2024-04-28T23:31:41,939     check.warn(importable)
2024-04-28T23:31:41,939   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.CNV.example_input' is absent from the `packages` configuration.
2024-04-28T23:31:41,939   !!

2024-04-28T23:31:41,941           ********************************************************************************
2024-04-28T23:31:41,941           ############################
2024-04-28T23:31:41,942           # Package would be ignored #
2024-04-28T23:31:41,942           ############################
2024-04-28T23:31:41,943           Python recognizes 'SigProfilerMatrixGenerator.references.CNV.example_input' as an importable package[^1],
2024-04-28T23:31:41,943           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:41,944           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:41,944           package, please make sure that 'SigProfilerMatrixGenerator.references.CNV.example_input' is explicitly added
2024-04-28T23:31:41,945           to the `packages` configuration field.

2024-04-28T23:31:41,946           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:41,946           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:41,947           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:41,948           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:41,949           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:41,950           If you don't want 'SigProfilerMatrixGenerator.references.CNV.example_input' to be distributed and are
2024-04-28T23:31:41,950           already explicitly excluding 'SigProfilerMatrixGenerator.references.CNV.example_input' via
2024-04-28T23:31:41,950           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:41,951           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:41,951           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:41,952           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:41,953           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:41,955           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:41,955                 even if it does not contain any `.py` files.
2024-04-28T23:31:41,955                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:41,956                 directory, all directories are treated like packages.
2024-04-28T23:31:41,956           ********************************************************************************

2024-04-28T23:31:41,957   !!
2024-04-28T23:31:41,957     check.warn(importable)
2024-04-28T23:31:41,957   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.CNV.example_output' is absent from the `packages` configuration.
2024-04-28T23:31:41,958   !!

2024-04-28T23:31:41,958           ********************************************************************************
2024-04-28T23:31:41,959           ############################
2024-04-28T23:31:41,959           # Package would be ignored #
2024-04-28T23:31:41,959           ############################
2024-04-28T23:31:41,960           Python recognizes 'SigProfilerMatrixGenerator.references.CNV.example_output' as an importable package[^1],
2024-04-28T23:31:41,960           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:41,961           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:41,961           package, please make sure that 'SigProfilerMatrixGenerator.references.CNV.example_output' is explicitly added
2024-04-28T23:31:41,962           to the `packages` configuration field.

2024-04-28T23:31:41,963           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:41,963           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:41,964           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:41,965           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:41,966           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:41,966           If you don't want 'SigProfilerMatrixGenerator.references.CNV.example_output' to be distributed and are
2024-04-28T23:31:41,967           already explicitly excluding 'SigProfilerMatrixGenerator.references.CNV.example_output' via
2024-04-28T23:31:41,967           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:41,968           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:41,969           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:41,970           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:41,971           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:41,972           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:41,972                 even if it does not contain any `.py` files.
2024-04-28T23:31:41,973                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:41,973                 directory, all directories are treated like packages.
2024-04-28T23:31:41,974           ********************************************************************************

2024-04-28T23:31:41,975   !!
2024-04-28T23:31:41,975     check.warn(importable)
2024-04-28T23:31:41,976   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.SV' is absent from the `packages` configuration.
2024-04-28T23:31:41,976   !!

2024-04-28T23:31:41,977           ********************************************************************************
2024-04-28T23:31:41,978           ############################
2024-04-28T23:31:41,978           # Package would be ignored #
2024-04-28T23:31:41,979           ############################
2024-04-28T23:31:41,980           Python recognizes 'SigProfilerMatrixGenerator.references.SV' as an importable package[^1],
2024-04-28T23:31:41,980           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:41,981           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:41,981           package, please make sure that 'SigProfilerMatrixGenerator.references.SV' is explicitly added
2024-04-28T23:31:41,981           to the `packages` configuration field.

2024-04-28T23:31:41,982           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:41,982           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:41,983           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:41,983           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:41,984           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:41,985           If you don't want 'SigProfilerMatrixGenerator.references.SV' to be distributed and are
2024-04-28T23:31:41,985           already explicitly excluding 'SigProfilerMatrixGenerator.references.SV' via
2024-04-28T23:31:41,985           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:41,986           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:41,986           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:41,987           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:41,989           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:41,990           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:41,991                 even if it does not contain any `.py` files.
2024-04-28T23:31:41,991                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:41,992                 directory, all directories are treated like packages.
2024-04-28T23:31:41,993           ********************************************************************************

2024-04-28T23:31:41,994   !!
2024-04-28T23:31:41,994     check.warn(importable)
2024-04-28T23:31:41,995   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.SV.example_input' is absent from the `packages` configuration.
2024-04-28T23:31:41,995   !!

2024-04-28T23:31:41,997           ********************************************************************************
2024-04-28T23:31:41,997           ############################
2024-04-28T23:31:41,998           # Package would be ignored #
2024-04-28T23:31:41,998           ############################
2024-04-28T23:31:41,999           Python recognizes 'SigProfilerMatrixGenerator.references.SV.example_input' as an importable package[^1],
2024-04-28T23:31:41,999           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,000           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,000           package, please make sure that 'SigProfilerMatrixGenerator.references.SV.example_input' is explicitly added
2024-04-28T23:31:42,001           to the `packages` configuration field.

2024-04-28T23:31:42,002           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,002           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,003           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,004           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,005           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,006           If you don't want 'SigProfilerMatrixGenerator.references.SV.example_input' to be distributed and are
2024-04-28T23:31:42,007           already explicitly excluding 'SigProfilerMatrixGenerator.references.SV.example_input' via
2024-04-28T23:31:42,007           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,007           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,008           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,009           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,009           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,010           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,011                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,011                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,011                 directory, all directories are treated like packages.
2024-04-28T23:31:42,012           ********************************************************************************

2024-04-28T23:31:42,012   !!
2024-04-28T23:31:42,013     check.warn(importable)
2024-04-28T23:31:42,013   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.SV.example_input.PCAWG' is absent from the `packages` configuration.
2024-04-28T23:31:42,014   !!

2024-04-28T23:31:42,014           ********************************************************************************
2024-04-28T23:31:42,015           ############################
2024-04-28T23:31:42,015           # Package would be ignored #
2024-04-28T23:31:42,016           ############################
2024-04-28T23:31:42,017           Python recognizes 'SigProfilerMatrixGenerator.references.SV.example_input.PCAWG' as an importable package[^1],
2024-04-28T23:31:42,017           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,018           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,019           package, please make sure that 'SigProfilerMatrixGenerator.references.SV.example_input.PCAWG' is explicitly added
2024-04-28T23:31:42,019           to the `packages` configuration field.

2024-04-28T23:31:42,021           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,021           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,022           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,023           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,024           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,025           If you don't want 'SigProfilerMatrixGenerator.references.SV.example_input.PCAWG' to be distributed and are
2024-04-28T23:31:42,025           already explicitly excluding 'SigProfilerMatrixGenerator.references.SV.example_input.PCAWG' via
2024-04-28T23:31:42,025           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,026           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,026           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,027           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,029           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,030           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,031                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,031                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,032                 directory, all directories are treated like packages.
2024-04-28T23:31:42,033           ********************************************************************************

2024-04-28T23:31:42,033   !!
2024-04-28T23:31:42,034     check.warn(importable)
2024-04-28T23:31:42,034   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.SV.example_output' is absent from the `packages` configuration.
2024-04-28T23:31:42,034   !!

2024-04-28T23:31:42,035           ********************************************************************************
2024-04-28T23:31:42,035           ############################
2024-04-28T23:31:42,036           # Package would be ignored #
2024-04-28T23:31:42,036           ############################
2024-04-28T23:31:42,036           Python recognizes 'SigProfilerMatrixGenerator.references.SV.example_output' as an importable package[^1],
2024-04-28T23:31:42,037           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,038           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,038           package, please make sure that 'SigProfilerMatrixGenerator.references.SV.example_output' is explicitly added
2024-04-28T23:31:42,038           to the `packages` configuration field.

2024-04-28T23:31:42,039           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,039           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,040           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,040           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,041           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,043           If you don't want 'SigProfilerMatrixGenerator.references.SV.example_output' to be distributed and are
2024-04-28T23:31:42,043           already explicitly excluding 'SigProfilerMatrixGenerator.references.SV.example_output' via
2024-04-28T23:31:42,044           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,044           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,045           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,046           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,047           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,048           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,049                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,049                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,050                 directory, all directories are treated like packages.
2024-04-28T23:31:42,050           ********************************************************************************

2024-04-28T23:31:42,051   !!
2024-04-28T23:31:42,051     check.warn(importable)
2024-04-28T23:31:42,052   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.context_distributions' is absent from the `packages` configuration.
2024-04-28T23:31:42,052   !!

2024-04-28T23:31:42,053           ********************************************************************************
2024-04-28T23:31:42,054           ############################
2024-04-28T23:31:42,055           # Package would be ignored #
2024-04-28T23:31:42,055           ############################
2024-04-28T23:31:42,056           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.context_distributions' as an importable package[^1],
2024-04-28T23:31:42,056           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,057           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,058           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.context_distributions' is explicitly added
2024-04-28T23:31:42,058           to the `packages` configuration field.

2024-04-28T23:31:42,059           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,059           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,060           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,060           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,061           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,062           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.context_distributions' to be distributed and are
2024-04-28T23:31:42,062           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.context_distributions' via
2024-04-28T23:31:42,063           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,063           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,064           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,065           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,066           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,067           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,068                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,069                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,069                 directory, all directories are treated like packages.
2024-04-28T23:31:42,070           ********************************************************************************

2024-04-28T23:31:42,071   !!
2024-04-28T23:31:42,071     check.warn(importable)
2024-04-28T23:31:42,072   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome' is absent from the `packages` configuration.
2024-04-28T23:31:42,073   !!

2024-04-28T23:31:42,074           ********************************************************************************
2024-04-28T23:31:42,074           ############################
2024-04-28T23:31:42,075           # Package would be ignored #
2024-04-28T23:31:42,075           ############################
2024-04-28T23:31:42,076           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome' as an importable package[^1],
2024-04-28T23:31:42,076           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,077           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,077           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome' is explicitly added
2024-04-28T23:31:42,078           to the `packages` configuration field.

2024-04-28T23:31:42,079           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,079           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,080           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,081           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,082           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,083           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome' to be distributed and are
2024-04-28T23:31:42,084           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome' via
2024-04-28T23:31:42,085           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,085           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,085           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,086           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,087           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,088           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,088                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,089                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,089                 directory, all directories are treated like packages.
2024-04-28T23:31:42,089           ********************************************************************************

2024-04-28T23:31:42,090   !!
2024-04-28T23:31:42,090     check.warn(importable)
2024-04-28T23:31:42,091   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh37' is absent from the `packages` configuration.
2024-04-28T23:31:42,091   !!

2024-04-28T23:31:42,092           ********************************************************************************
2024-04-28T23:31:42,092           ############################
2024-04-28T23:31:42,093           # Package would be ignored #
2024-04-28T23:31:42,093           ############################
2024-04-28T23:31:42,094           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh37' as an importable package[^1],
2024-04-28T23:31:42,095           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,096           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,096           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh37' is explicitly added
2024-04-28T23:31:42,097           to the `packages` configuration field.

2024-04-28T23:31:42,098           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,098           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,099           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,100           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,101           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,102           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh37' to be distributed and are
2024-04-28T23:31:42,103           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh37' via
2024-04-28T23:31:42,103           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,103           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,104           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,105           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,106           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,107           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,108                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,109                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,109                 directory, all directories are treated like packages.
2024-04-28T23:31:42,109           ********************************************************************************

2024-04-28T23:31:42,111   !!
2024-04-28T23:31:42,111     check.warn(importable)
2024-04-28T23:31:42,111   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh38' is absent from the `packages` configuration.
2024-04-28T23:31:42,112   !!

2024-04-28T23:31:42,112           ********************************************************************************
2024-04-28T23:31:42,113           ############################
2024-04-28T23:31:42,113           # Package would be ignored #
2024-04-28T23:31:42,113           ############################
2024-04-28T23:31:42,114           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh38' as an importable package[^1],
2024-04-28T23:31:42,114           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,115           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,115           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh38' is explicitly added
2024-04-28T23:31:42,115           to the `packages` configuration field.

2024-04-28T23:31:42,116           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,117           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,117           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,118           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,119           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,120           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh38' to be distributed and are
2024-04-28T23:31:42,120           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.GRCh38' via
2024-04-28T23:31:42,121           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,121           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,122           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,123           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,124           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,125           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,126                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,127                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,127                 directory, all directories are treated like packages.
2024-04-28T23:31:42,128           ********************************************************************************

2024-04-28T23:31:42,129   !!
2024-04-28T23:31:42,129     check.warn(importable)
2024-04-28T23:31:42,130   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.c_elegans' is absent from the `packages` configuration.
2024-04-28T23:31:42,130   !!

2024-04-28T23:31:42,131           ********************************************************************************
2024-04-28T23:31:42,132           ############################
2024-04-28T23:31:42,133           # Package would be ignored #
2024-04-28T23:31:42,133           ############################
2024-04-28T23:31:42,134           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.c_elegans' as an importable package[^1],
2024-04-28T23:31:42,135           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,136           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,136           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.c_elegans' is explicitly added
2024-04-28T23:31:42,137           to the `packages` configuration field.

2024-04-28T23:31:42,138           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,138           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,139           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,139           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,140           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,141           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.c_elegans' to be distributed and are
2024-04-28T23:31:42,141           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.c_elegans' via
2024-04-28T23:31:42,142           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,143           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,143           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,144           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,145           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,146           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,146                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,147                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,147                 directory, all directories are treated like packages.
2024-04-28T23:31:42,148           ********************************************************************************

2024-04-28T23:31:42,149   !!
2024-04-28T23:31:42,150     check.warn(importable)
2024-04-28T23:31:42,150   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.dog' is absent from the `packages` configuration.
2024-04-28T23:31:42,151   !!

2024-04-28T23:31:42,152           ********************************************************************************
2024-04-28T23:31:42,153           ############################
2024-04-28T23:31:42,153           # Package would be ignored #
2024-04-28T23:31:42,154           ############################
2024-04-28T23:31:42,154           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.dog' as an importable package[^1],
2024-04-28T23:31:42,155           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,156           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,156           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.dog' is explicitly added
2024-04-28T23:31:42,157           to the `packages` configuration field.

2024-04-28T23:31:42,158           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,158           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,158           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,159           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,161           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,162           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.dog' to be distributed and are
2024-04-28T23:31:42,162           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.dog' via
2024-04-28T23:31:42,163           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,164           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,164           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,165           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,165           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,167           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,167                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,167                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,168                 directory, all directories are treated like packages.
2024-04-28T23:31:42,168           ********************************************************************************

2024-04-28T23:31:42,169   !!
2024-04-28T23:31:42,169     check.warn(importable)
2024-04-28T23:31:42,170   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.ebv' is absent from the `packages` configuration.
2024-04-28T23:31:42,170   !!

2024-04-28T23:31:42,171           ********************************************************************************
2024-04-28T23:31:42,172           ############################
2024-04-28T23:31:42,172           # Package would be ignored #
2024-04-28T23:31:42,173           ############################
2024-04-28T23:31:42,173           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.ebv' as an importable package[^1],
2024-04-28T23:31:42,174           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,175           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,176           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.ebv' is explicitly added
2024-04-28T23:31:42,176           to the `packages` configuration field.

2024-04-28T23:31:42,177           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,178           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,178           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,179           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,180           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,182           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.ebv' to be distributed and are
2024-04-28T23:31:42,182           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.ebv' via
2024-04-28T23:31:42,182           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,183           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,183           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,184           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,185           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,187           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,187                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,188                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,188                 directory, all directories are treated like packages.
2024-04-28T23:31:42,189           ********************************************************************************

2024-04-28T23:31:42,190   !!
2024-04-28T23:31:42,191     check.warn(importable)
2024-04-28T23:31:42,191   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm10' is absent from the `packages` configuration.
2024-04-28T23:31:42,191   !!

2024-04-28T23:31:42,192           ********************************************************************************
2024-04-28T23:31:42,192           ############################
2024-04-28T23:31:42,192           # Package would be ignored #
2024-04-28T23:31:42,193           ############################
2024-04-28T23:31:42,193           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm10' as an importable package[^1],
2024-04-28T23:31:42,193           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,194           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,195           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm10' is explicitly added
2024-04-28T23:31:42,195           to the `packages` configuration field.

2024-04-28T23:31:42,196           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,196           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,196           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,197           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,198           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,199           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm10' to be distributed and are
2024-04-28T23:31:42,200           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm10' via
2024-04-28T23:31:42,200           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,201           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,202           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,203           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,204           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,206           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,207                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,208                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,208                 directory, all directories are treated like packages.
2024-04-28T23:31:42,209           ********************************************************************************

2024-04-28T23:31:42,210   !!
2024-04-28T23:31:42,210     check.warn(importable)
2024-04-28T23:31:42,211   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm39' is absent from the `packages` configuration.
2024-04-28T23:31:42,211   !!

2024-04-28T23:31:42,212           ********************************************************************************
2024-04-28T23:31:42,213           ############################
2024-04-28T23:31:42,214           # Package would be ignored #
2024-04-28T23:31:42,216           ############################
2024-04-28T23:31:42,218           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm39' as an importable package[^1],
2024-04-28T23:31:42,220           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,224           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,227           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm39' is explicitly added
2024-04-28T23:31:42,229           to the `packages` configuration field.

2024-04-28T23:31:42,235           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,237           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,239           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,244           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,248           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,250           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm39' to be distributed and are
2024-04-28T23:31:42,251           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm39' via
2024-04-28T23:31:42,252           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,254           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,255           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,256           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,258           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,259           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,259                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,259                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,260                 directory, all directories are treated like packages.
2024-04-28T23:31:42,261           ********************************************************************************

2024-04-28T23:31:42,262   !!
2024-04-28T23:31:42,262     check.warn(importable)
2024-04-28T23:31:42,263   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm9' is absent from the `packages` configuration.
2024-04-28T23:31:42,264   !!

2024-04-28T23:31:42,265           ********************************************************************************
2024-04-28T23:31:42,265           ############################
2024-04-28T23:31:42,266           # Package would be ignored #
2024-04-28T23:31:42,266           ############################
2024-04-28T23:31:42,267           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm9' as an importable package[^1],
2024-04-28T23:31:42,267           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,269           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,270           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm9' is explicitly added
2024-04-28T23:31:42,270           to the `packages` configuration field.

2024-04-28T23:31:42,271           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,271           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,272           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,274           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,275           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,277           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm9' to be distributed and are
2024-04-28T23:31:42,277           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.mm9' via
2024-04-28T23:31:42,278           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,278           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,279           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,280           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,281           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,282           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,282                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,283                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,283                 directory, all directories are treated like packages.
2024-04-28T23:31:42,283           ********************************************************************************

2024-04-28T23:31:42,285   !!
2024-04-28T23:31:42,286     check.warn(importable)
2024-04-28T23:31:42,287   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.rn6' is absent from the `packages` configuration.
2024-04-28T23:31:42,288   !!

2024-04-28T23:31:42,289           ********************************************************************************
2024-04-28T23:31:42,289           ############################
2024-04-28T23:31:42,290           # Package would be ignored #
2024-04-28T23:31:42,290           ############################
2024-04-28T23:31:42,290           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.rn6' as an importable package[^1],
2024-04-28T23:31:42,291           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,292           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,293           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.rn6' is explicitly added
2024-04-28T23:31:42,293           to the `packages` configuration field.

2024-04-28T23:31:42,294           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,295           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,295           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,297           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,300           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,301           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.rn6' to be distributed and are
2024-04-28T23:31:42,301           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.rn6' via
2024-04-28T23:31:42,302           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,302           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,303           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,304           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,305           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,310           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,312                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,313                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,314                 directory, all directories are treated like packages.
2024-04-28T23:31:42,314           ********************************************************************************

2024-04-28T23:31:42,315   !!
2024-04-28T23:31:42,316     check.warn(importable)
2024-04-28T23:31:42,317   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.exome.yeast' is absent from the `packages` configuration.
2024-04-28T23:31:42,318   !!

2024-04-28T23:31:42,319           ********************************************************************************
2024-04-28T23:31:42,320           ############################
2024-04-28T23:31:42,320           # Package would be ignored #
2024-04-28T23:31:42,320           ############################
2024-04-28T23:31:42,321           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.exome.yeast' as an importable package[^1],
2024-04-28T23:31:42,321           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,322           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,323           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.exome.yeast' is explicitly added
2024-04-28T23:31:42,324           to the `packages` configuration field.

2024-04-28T23:31:42,325           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,326           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,326           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,327           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,328           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,329           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.exome.yeast' to be distributed and are
2024-04-28T23:31:42,329           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.exome.yeast' via
2024-04-28T23:31:42,330           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,330           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,331           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,332           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,333           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,335           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,335                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,336                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,337                 directory, all directories are treated like packages.
2024-04-28T23:31:42,339           ********************************************************************************

2024-04-28T23:31:42,343   !!
2024-04-28T23:31:42,345     check.warn(importable)
2024-04-28T23:31:42,348   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts' is absent from the `packages` configuration.
2024-04-28T23:31:42,350   !!

2024-04-28T23:31:42,352           ********************************************************************************
2024-04-28T23:31:42,352           ############################
2024-04-28T23:31:42,353           # Package would be ignored #
2024-04-28T23:31:42,353           ############################
2024-04-28T23:31:42,354           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts' as an importable package[^1],
2024-04-28T23:31:42,354           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,355           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,356           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts' is explicitly added
2024-04-28T23:31:42,357           to the `packages` configuration field.

2024-04-28T23:31:42,358           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,358           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,359           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,359           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,360           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,361           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts' to be distributed and are
2024-04-28T23:31:42,362           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts' via
2024-04-28T23:31:42,363           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,364           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,365           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,368           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,369           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,370           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,370                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,371                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,371                 directory, all directories are treated like packages.
2024-04-28T23:31:42,371           ********************************************************************************

2024-04-28T23:31:42,372   !!
2024-04-28T23:31:42,373     check.warn(importable)
2024-04-28T23:31:42,373   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh37' is absent from the `packages` configuration.
2024-04-28T23:31:42,374   !!

2024-04-28T23:31:42,375           ********************************************************************************
2024-04-28T23:31:42,376           ############################
2024-04-28T23:31:42,376           # Package would be ignored #
2024-04-28T23:31:42,377           ############################
2024-04-28T23:31:42,378           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh37' as an importable package[^1],
2024-04-28T23:31:42,379           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,380           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,381           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh37' is explicitly added
2024-04-28T23:31:42,381           to the `packages` configuration field.

2024-04-28T23:31:42,382           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,383           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,383           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,384           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,385           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,386           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh37' to be distributed and are
2024-04-28T23:31:42,386           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh37' via
2024-04-28T23:31:42,387           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,388           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,388           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,389           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,390           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,391           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,391                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,392                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,392                 directory, all directories are treated like packages.
2024-04-28T23:31:42,392           ********************************************************************************

2024-04-28T23:31:42,393   !!
2024-04-28T23:31:42,393     check.warn(importable)
2024-04-28T23:31:42,394   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh38' is absent from the `packages` configuration.
2024-04-28T23:31:42,394   !!

2024-04-28T23:31:42,395           ********************************************************************************
2024-04-28T23:31:42,395           ############################
2024-04-28T23:31:42,395           # Package would be ignored #
2024-04-28T23:31:42,396           ############################
2024-04-28T23:31:42,396           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh38' as an importable package[^1],
2024-04-28T23:31:42,397           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,398           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,398           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh38' is explicitly added
2024-04-28T23:31:42,399           to the `packages` configuration field.

2024-04-28T23:31:42,400           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,400           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,401           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,402           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,403           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,404           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh38' to be distributed and are
2024-04-28T23:31:42,405           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.GRCh38' via
2024-04-28T23:31:42,406           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,407           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,409           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,412           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,414           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,416           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,417                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,418                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,419                 directory, all directories are treated like packages.
2024-04-28T23:31:42,420           ********************************************************************************

2024-04-28T23:31:42,421   !!
2024-04-28T23:31:42,422     check.warn(importable)
2024-04-28T23:31:42,423   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.c_elegans' is absent from the `packages` configuration.
2024-04-28T23:31:42,423   !!

2024-04-28T23:31:42,425           ********************************************************************************
2024-04-28T23:31:42,426           ############################
2024-04-28T23:31:42,426           # Package would be ignored #
2024-04-28T23:31:42,427           ############################
2024-04-28T23:31:42,427           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.c_elegans' as an importable package[^1],
2024-04-28T23:31:42,428           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,429           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,430           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.c_elegans' is explicitly added
2024-04-28T23:31:42,430           to the `packages` configuration field.

2024-04-28T23:31:42,431           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,432           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,433           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,436           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,438           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,441           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.c_elegans' to be distributed and are
2024-04-28T23:31:42,442           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.c_elegans' via
2024-04-28T23:31:42,443           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,444           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,444           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,445           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,447           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,449           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,450                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,450                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,451                 directory, all directories are treated like packages.
2024-04-28T23:31:42,452           ********************************************************************************

2024-04-28T23:31:42,453   !!
2024-04-28T23:31:42,454     check.warn(importable)
2024-04-28T23:31:42,455   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.dog' is absent from the `packages` configuration.
2024-04-28T23:31:42,455   !!

2024-04-28T23:31:42,456           ********************************************************************************
2024-04-28T23:31:42,457           ############################
2024-04-28T23:31:42,457           # Package would be ignored #
2024-04-28T23:31:42,458           ############################
2024-04-28T23:31:42,458           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.dog' as an importable package[^1],
2024-04-28T23:31:42,459           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,460           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,461           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.dog' is explicitly added
2024-04-28T23:31:42,461           to the `packages` configuration field.

2024-04-28T23:31:42,463           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,463           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,464           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,465           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,466           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,467           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.dog' to be distributed and are
2024-04-28T23:31:42,467           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.dog' via
2024-04-28T23:31:42,468           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,468           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,469           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,470           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,471           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,472           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,473                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,473                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,474                 directory, all directories are treated like packages.
2024-04-28T23:31:42,474           ********************************************************************************

2024-04-28T23:31:42,476   !!
2024-04-28T23:31:42,476     check.warn(importable)
2024-04-28T23:31:42,477   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.ebv' is absent from the `packages` configuration.
2024-04-28T23:31:42,477   !!

2024-04-28T23:31:42,479           ********************************************************************************
2024-04-28T23:31:42,480           ############################
2024-04-28T23:31:42,480           # Package would be ignored #
2024-04-28T23:31:42,481           ############################
2024-04-28T23:31:42,482           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.ebv' as an importable package[^1],
2024-04-28T23:31:42,482           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,484           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,484           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.ebv' is explicitly added
2024-04-28T23:31:42,485           to the `packages` configuration field.

2024-04-28T23:31:42,486           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,487           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,487           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,488           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,490           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,491           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.ebv' to be distributed and are
2024-04-28T23:31:42,491           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.ebv' via
2024-04-28T23:31:42,492           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,493           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,494           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,495           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,496           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,497           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,498                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,498                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,499                 directory, all directories are treated like packages.
2024-04-28T23:31:42,499           ********************************************************************************

2024-04-28T23:31:42,500   !!
2024-04-28T23:31:42,501     check.warn(importable)
2024-04-28T23:31:42,501   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm10' is absent from the `packages` configuration.
2024-04-28T23:31:42,501   !!

2024-04-28T23:31:42,502           ********************************************************************************
2024-04-28T23:31:42,503           ############################
2024-04-28T23:31:42,503           # Package would be ignored #
2024-04-28T23:31:42,504           ############################
2024-04-28T23:31:42,505           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm10' as an importable package[^1],
2024-04-28T23:31:42,505           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,506           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,507           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm10' is explicitly added
2024-04-28T23:31:42,508           to the `packages` configuration field.

2024-04-28T23:31:42,509           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,509           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,510           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,511           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,513           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,515           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm10' to be distributed and are
2024-04-28T23:31:42,515           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm10' via
2024-04-28T23:31:42,516           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,517           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,517           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,519           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,520           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,522           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,523                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,523                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,524                 directory, all directories are treated like packages.
2024-04-28T23:31:42,525           ********************************************************************************

2024-04-28T23:31:42,526   !!
2024-04-28T23:31:42,527     check.warn(importable)
2024-04-28T23:31:42,528   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm39' is absent from the `packages` configuration.
2024-04-28T23:31:42,528   !!

2024-04-28T23:31:42,530           ********************************************************************************
2024-04-28T23:31:42,530           ############################
2024-04-28T23:31:42,531           # Package would be ignored #
2024-04-28T23:31:42,532           ############################
2024-04-28T23:31:42,532           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm39' as an importable package[^1],
2024-04-28T23:31:42,533           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,534           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,534           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm39' is explicitly added
2024-04-28T23:31:42,535           to the `packages` configuration field.

2024-04-28T23:31:42,536           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,536           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,537           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,538           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,539           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,540           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm39' to be distributed and are
2024-04-28T23:31:42,541           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm39' via
2024-04-28T23:31:42,541           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,542           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,542           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,544           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,545           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,547           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,548                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,549                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,550                 directory, all directories are treated like packages.
2024-04-28T23:31:42,550           ********************************************************************************

2024-04-28T23:31:42,552   !!
2024-04-28T23:31:42,552     check.warn(importable)
2024-04-28T23:31:42,553   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm9' is absent from the `packages` configuration.
2024-04-28T23:31:42,554   !!

2024-04-28T23:31:42,555           ********************************************************************************
2024-04-28T23:31:42,555           ############################
2024-04-28T23:31:42,556           # Package would be ignored #
2024-04-28T23:31:42,557           ############################
2024-04-28T23:31:42,558           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm9' as an importable package[^1],
2024-04-28T23:31:42,558           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,560           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,560           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm9' is explicitly added
2024-04-28T23:31:42,561           to the `packages` configuration field.

2024-04-28T23:31:42,563           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,563           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,563           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,564           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,565           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,566           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm9' to be distributed and are
2024-04-28T23:31:42,566           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.mm9' via
2024-04-28T23:31:42,567           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,567           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,567           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,568           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,569           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,570           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,571                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,571                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,571                 directory, all directories are treated like packages.
2024-04-28T23:31:42,572           ********************************************************************************

2024-04-28T23:31:42,573   !!
2024-04-28T23:31:42,573     check.warn(importable)
2024-04-28T23:31:42,574   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn6' is absent from the `packages` configuration.
2024-04-28T23:31:42,575   !!

2024-04-28T23:31:42,576           ********************************************************************************
2024-04-28T23:31:42,576           ############################
2024-04-28T23:31:42,577           # Package would be ignored #
2024-04-28T23:31:42,577           ############################
2024-04-28T23:31:42,578           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn6' as an importable package[^1],
2024-04-28T23:31:42,578           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,579           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,580           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn6' is explicitly added
2024-04-28T23:31:42,580           to the `packages` configuration field.

2024-04-28T23:31:42,582           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,582           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,583           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,584           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,585           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,587           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn6' to be distributed and are
2024-04-28T23:31:42,588           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn6' via
2024-04-28T23:31:42,589           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,590           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,590           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,592           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,593           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,595           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,596                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,597                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,598                 directory, all directories are treated like packages.
2024-04-28T23:31:42,599           ********************************************************************************

2024-04-28T23:31:42,599   !!
2024-04-28T23:31:42,600     check.warn(importable)
2024-04-28T23:31:42,601   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn7' is absent from the `packages` configuration.
2024-04-28T23:31:42,605   !!

2024-04-28T23:31:42,615           ********************************************************************************
2024-04-28T23:31:42,615           ############################
2024-04-28T23:31:42,616           # Package would be ignored #
2024-04-28T23:31:42,616           ############################
2024-04-28T23:31:42,617           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn7' as an importable package[^1],
2024-04-28T23:31:42,617           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,618           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,618           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn7' is explicitly added
2024-04-28T23:31:42,619           to the `packages` configuration field.

2024-04-28T23:31:42,620           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,621           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,621           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,623           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,624           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,625           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn7' to be distributed and are
2024-04-28T23:31:42,626           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.rn7' via
2024-04-28T23:31:42,626           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,627           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,627           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,629           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,630           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,631           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,632                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,632                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,633                 directory, all directories are treated like packages.
2024-04-28T23:31:42,633           ********************************************************************************

2024-04-28T23:31:42,634   !!
2024-04-28T23:31:42,635     check.warn(importable)
2024-04-28T23:31:42,635   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.yeast' is absent from the `packages` configuration.
2024-04-28T23:31:42,636   !!

2024-04-28T23:31:42,637           ********************************************************************************
2024-04-28T23:31:42,637           ############################
2024-04-28T23:31:42,638           # Package would be ignored #
2024-04-28T23:31:42,638           ############################
2024-04-28T23:31:42,638           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.yeast' as an importable package[^1],
2024-04-28T23:31:42,639           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,640           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,640           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.yeast' is explicitly added
2024-04-28T23:31:42,640           to the `packages` configuration field.

2024-04-28T23:31:42,641           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,642           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,642           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,643           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,645           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,646           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.yeast' to be distributed and are
2024-04-28T23:31:42,646           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.transcripts.yeast' via
2024-04-28T23:31:42,647           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,647           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,648           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,649           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,650           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,651           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,652                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,652                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,653                 directory, all directories are treated like packages.
2024-04-28T23:31:42,653           ********************************************************************************

2024-04-28T23:31:42,654   !!
2024-04-28T23:31:42,655     check.warn(importable)
2024-04-28T23:31:42,655   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED' is absent from the `packages` configuration.
2024-04-28T23:31:42,656   !!

2024-04-28T23:31:42,657           ********************************************************************************
2024-04-28T23:31:42,657           ############################
2024-04-28T23:31:42,658           # Package would be ignored #
2024-04-28T23:31:42,658           ############################
2024-04-28T23:31:42,659           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED' as an importable package[^1],
2024-04-28T23:31:42,659           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,660           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,661           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED' is explicitly added
2024-04-28T23:31:42,661           to the `packages` configuration field.

2024-04-28T23:31:42,662           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,663           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,663           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,664           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,665           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,666           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED' to be distributed and are
2024-04-28T23:31:42,667           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED' via
2024-04-28T23:31:42,667           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,668           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,668           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,670           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,671           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,672           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,673                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,673                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,674                 directory, all directories are treated like packages.
2024-04-28T23:31:42,674           ********************************************************************************

2024-04-28T23:31:42,675   !!
2024-04-28T23:31:42,676     check.warn(importable)
2024-04-28T23:31:42,676   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh37' is absent from the `packages` configuration.
2024-04-28T23:31:42,676   !!

2024-04-28T23:31:42,678           ********************************************************************************
2024-04-28T23:31:42,678           ############################
2024-04-28T23:31:42,679           # Package would be ignored #
2024-04-28T23:31:42,679           ############################
2024-04-28T23:31:42,680           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh37' as an importable package[^1],
2024-04-28T23:31:42,680           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,681           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,682           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh37' is explicitly added
2024-04-28T23:31:42,682           to the `packages` configuration field.

2024-04-28T23:31:42,684           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,684           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,685           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,686           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,687           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,688           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh37' to be distributed and are
2024-04-28T23:31:42,688           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh37' via
2024-04-28T23:31:42,689           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,690           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,690           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,691           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,692           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,693           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,694                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,694                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,694                 directory, all directories are treated like packages.
2024-04-28T23:31:42,695           ********************************************************************************

2024-04-28T23:31:42,696   !!
2024-04-28T23:31:42,696     check.warn(importable)
2024-04-28T23:31:42,696   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh38' is absent from the `packages` configuration.
2024-04-28T23:31:42,697   !!

2024-04-28T23:31:42,698           ********************************************************************************
2024-04-28T23:31:42,698           ############################
2024-04-28T23:31:42,698           # Package would be ignored #
2024-04-28T23:31:42,699           ############################
2024-04-28T23:31:42,699           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh38' as an importable package[^1],
2024-04-28T23:31:42,700           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,701           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,701           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh38' is explicitly added
2024-04-28T23:31:42,701           to the `packages` configuration field.

2024-04-28T23:31:42,702           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,703           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,703           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,704           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,705           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,706           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh38' to be distributed and are
2024-04-28T23:31:42,706           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.GRCh38' via
2024-04-28T23:31:42,707           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,707           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,708           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,709           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,710           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,713           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,714                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,714                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,715                 directory, all directories are treated like packages.
2024-04-28T23:31:42,715           ********************************************************************************

2024-04-28T23:31:42,717   !!
2024-04-28T23:31:42,717     check.warn(importable)
2024-04-28T23:31:42,718   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.c_elegans' is absent from the `packages` configuration.
2024-04-28T23:31:42,718   !!

2024-04-28T23:31:42,719           ********************************************************************************
2024-04-28T23:31:42,720           ############################
2024-04-28T23:31:42,720           # Package would be ignored #
2024-04-28T23:31:42,720           ############################
2024-04-28T23:31:42,721           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.c_elegans' as an importable package[^1],
2024-04-28T23:31:42,721           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,722           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,722           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.c_elegans' is explicitly added
2024-04-28T23:31:42,723           to the `packages` configuration field.

2024-04-28T23:31:42,724           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,724           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,725           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,726           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,726           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,727           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.c_elegans' to be distributed and are
2024-04-28T23:31:42,728           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.c_elegans' via
2024-04-28T23:31:42,729           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,729           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,730           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,730           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,731           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,733           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,733                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,734                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,734                 directory, all directories are treated like packages.
2024-04-28T23:31:42,735           ********************************************************************************

2024-04-28T23:31:42,736   !!
2024-04-28T23:31:42,737     check.warn(importable)
2024-04-28T23:31:42,737   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.dog' is absent from the `packages` configuration.
2024-04-28T23:31:42,738   !!

2024-04-28T23:31:42,738           ********************************************************************************
2024-04-28T23:31:42,739           ############################
2024-04-28T23:31:42,739           # Package would be ignored #
2024-04-28T23:31:42,740           ############################
2024-04-28T23:31:42,741           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.dog' as an importable package[^1],
2024-04-28T23:31:42,741           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,742           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,743           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.dog' is explicitly added
2024-04-28T23:31:42,743           to the `packages` configuration field.

2024-04-28T23:31:42,744           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,745           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,745           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,746           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,747           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,748           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.dog' to be distributed and are
2024-04-28T23:31:42,749           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.dog' via
2024-04-28T23:31:42,749           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,749           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,750           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,751           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,751           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,753           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,753                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,754                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,754                 directory, all directories are treated like packages.
2024-04-28T23:31:42,755           ********************************************************************************

2024-04-28T23:31:42,756   !!
2024-04-28T23:31:42,757     check.warn(importable)
2024-04-28T23:31:42,757   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm10' is absent from the `packages` configuration.
2024-04-28T23:31:42,758   !!

2024-04-28T23:31:42,758           ********************************************************************************
2024-04-28T23:31:42,759           ############################
2024-04-28T23:31:42,759           # Package would be ignored #
2024-04-28T23:31:42,760           ############################
2024-04-28T23:31:42,761           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm10' as an importable package[^1],
2024-04-28T23:31:42,761           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,762           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,763           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm10' is explicitly added
2024-04-28T23:31:42,763           to the `packages` configuration field.

2024-04-28T23:31:42,764           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,765           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,765           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,766           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,767           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,768           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm10' to be distributed and are
2024-04-28T23:31:42,769           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm10' via
2024-04-28T23:31:42,769           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,770           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,770           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,771           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,773           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,774           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,775                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,775                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,775                 directory, all directories are treated like packages.
2024-04-28T23:31:42,776           ********************************************************************************

2024-04-28T23:31:42,777   !!
2024-04-28T23:31:42,777     check.warn(importable)
2024-04-28T23:31:42,778   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm39' is absent from the `packages` configuration.
2024-04-28T23:31:42,778   !!

2024-04-28T23:31:42,779           ********************************************************************************
2024-04-28T23:31:42,779           ############################
2024-04-28T23:31:42,780           # Package would be ignored #
2024-04-28T23:31:42,781           ############################
2024-04-28T23:31:42,781           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm39' as an importable package[^1],
2024-04-28T23:31:42,782           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,782           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,783           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm39' is explicitly added
2024-04-28T23:31:42,783           to the `packages` configuration field.

2024-04-28T23:31:42,784           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,785           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,785           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,786           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,787           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,788           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm39' to be distributed and are
2024-04-28T23:31:42,789           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm39' via
2024-04-28T23:31:42,789           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,790           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,790           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,791           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,792           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,794           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,794                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,795                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,795                 directory, all directories are treated like packages.
2024-04-28T23:31:42,796           ********************************************************************************

2024-04-28T23:31:42,797   !!
2024-04-28T23:31:42,797     check.warn(importable)
2024-04-28T23:31:42,798   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm9' is absent from the `packages` configuration.
2024-04-28T23:31:42,798   !!

2024-04-28T23:31:42,799           ********************************************************************************
2024-04-28T23:31:42,800           ############################
2024-04-28T23:31:42,801           # Package would be ignored #
2024-04-28T23:31:42,801           ############################
2024-04-28T23:31:42,802           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm9' as an importable package[^1],
2024-04-28T23:31:42,802           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,803           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,803           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm9' is explicitly added
2024-04-28T23:31:42,804           to the `packages` configuration field.

2024-04-28T23:31:42,805           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,806           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,807           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,811           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,815           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,818           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm9' to be distributed and are
2024-04-28T23:31:42,820           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.mm9' via
2024-04-28T23:31:42,822           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,823           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,824           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,825           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,826           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,828           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,828                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,828                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,829                 directory, all directories are treated like packages.
2024-04-28T23:31:42,830           ********************************************************************************

2024-04-28T23:31:42,831   !!
2024-04-28T23:31:42,831     check.warn(importable)
2024-04-28T23:31:42,832   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn6' is absent from the `packages` configuration.
2024-04-28T23:31:42,832   !!

2024-04-28T23:31:42,833           ********************************************************************************
2024-04-28T23:31:42,834           ############################
2024-04-28T23:31:42,834           # Package would be ignored #
2024-04-28T23:31:42,835           ############################
2024-04-28T23:31:42,835           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn6' as an importable package[^1],
2024-04-28T23:31:42,836           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,837           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,837           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn6' is explicitly added
2024-04-28T23:31:42,838           to the `packages` configuration field.

2024-04-28T23:31:42,839           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,839           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,840           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,841           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,842           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,843           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn6' to be distributed and are
2024-04-28T23:31:42,843           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn6' via
2024-04-28T23:31:42,843           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,844           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,844           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,845           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,846           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,847           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,848                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,848                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,848                 directory, all directories are treated like packages.
2024-04-28T23:31:42,849           ********************************************************************************

2024-04-28T23:31:42,850   !!
2024-04-28T23:31:42,850     check.warn(importable)
2024-04-28T23:31:42,851   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn7' is absent from the `packages` configuration.
2024-04-28T23:31:42,851   !!

2024-04-28T23:31:42,852           ********************************************************************************
2024-04-28T23:31:42,852           ############################
2024-04-28T23:31:42,853           # Package would be ignored #
2024-04-28T23:31:42,853           ############################
2024-04-28T23:31:42,854           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn7' as an importable package[^1],
2024-04-28T23:31:42,854           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,855           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,856           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn7' is explicitly added
2024-04-28T23:31:42,857           to the `packages` configuration field.

2024-04-28T23:31:42,857           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,858           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,858           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,859           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,861           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,862           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn7' to be distributed and are
2024-04-28T23:31:42,862           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.rn7' via
2024-04-28T23:31:42,863           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,863           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,864           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,865           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,866           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,867           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,868                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,868                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,869                 directory, all directories are treated like packages.
2024-04-28T23:31:42,869           ********************************************************************************

2024-04-28T23:31:42,870   !!
2024-04-28T23:31:42,870     check.warn(importable)
2024-04-28T23:31:42,871   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.yeast' is absent from the `packages` configuration.
2024-04-28T23:31:42,871   !!

2024-04-28T23:31:42,872           ********************************************************************************
2024-04-28T23:31:42,873           ############################
2024-04-28T23:31:42,873           # Package would be ignored #
2024-04-28T23:31:42,874           ############################
2024-04-28T23:31:42,874           Python recognizes 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.yeast' as an importable package[^1],
2024-04-28T23:31:42,874           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,875           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,876           package, please make sure that 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.yeast' is explicitly added
2024-04-28T23:31:42,876           to the `packages` configuration field.

2024-04-28T23:31:42,877           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,878           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,878           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,879           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,881           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,885           If you don't want 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.yeast' to be distributed and are
2024-04-28T23:31:42,886           already explicitly excluding 'SigProfilerMatrixGenerator.references.chromosomes.tsb_BED.yeast' via
2024-04-28T23:31:42,887           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,889           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,889           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,890           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,891           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,892           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,893                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,893                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,894                 directory, all directories are treated like packages.
2024-04-28T23:31:42,894           ********************************************************************************

2024-04-28T23:31:42,895   !!
2024-04-28T23:31:42,896     check.warn(importable)
2024-04-28T23:31:42,896   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.scripts' is absent from the `packages` configuration.
2024-04-28T23:31:42,897   !!

2024-04-28T23:31:42,898           ********************************************************************************
2024-04-28T23:31:42,898           ############################
2024-04-28T23:31:42,899           # Package would be ignored #
2024-04-28T23:31:42,899           ############################
2024-04-28T23:31:42,900           Python recognizes 'SigProfilerMatrixGenerator.scripts' as an importable package[^1],
2024-04-28T23:31:42,900           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,901           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,902           package, please make sure that 'SigProfilerMatrixGenerator.scripts' is explicitly added
2024-04-28T23:31:42,902           to the `packages` configuration field.

2024-04-28T23:31:42,903           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,904           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,904           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,905           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,906           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,907           If you don't want 'SigProfilerMatrixGenerator.scripts' to be distributed and are
2024-04-28T23:31:42,907           already explicitly excluding 'SigProfilerMatrixGenerator.scripts' via
2024-04-28T23:31:42,908           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,908           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,909           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,910           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,911           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,913           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,913                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,914                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,914                 directory, all directories are treated like packages.
2024-04-28T23:31:42,915           ********************************************************************************

2024-04-28T23:31:42,916   !!
2024-04-28T23:31:42,916     check.warn(importable)
2024-04-28T23:31:42,917   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'SigProfilerMatrixGenerator.scripts.Benchmark' is absent from the `packages` configuration.
2024-04-28T23:31:42,917   !!

2024-04-28T23:31:42,918           ********************************************************************************
2024-04-28T23:31:42,919           ############################
2024-04-28T23:31:42,919           # Package would be ignored #
2024-04-28T23:31:42,920           ############################
2024-04-28T23:31:42,921           Python recognizes 'SigProfilerMatrixGenerator.scripts.Benchmark' as an importable package[^1],
2024-04-28T23:31:42,921           but it is absent from setuptools' `packages` configuration.

2024-04-28T23:31:42,922           This leads to an ambiguous overall configuration. If you want to distribute this
2024-04-28T23:31:42,923           package, please make sure that 'SigProfilerMatrixGenerator.scripts.Benchmark' is explicitly added
2024-04-28T23:31:42,923           to the `packages` configuration field.

2024-04-28T23:31:42,924           Alternatively, you can also rely on setuptools' discovery methods
2024-04-28T23:31:42,925           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-04-28T23:31:42,925           instead of `find_packages(...)`/`find:`).

2024-04-28T23:31:42,926           You can read more about "package discovery" on setuptools documentation page:

2024-04-28T23:31:42,927           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-04-28T23:31:42,929           If you don't want 'SigProfilerMatrixGenerator.scripts.Benchmark' to be distributed and are
2024-04-28T23:31:42,930           already explicitly excluding 'SigProfilerMatrixGenerator.scripts.Benchmark' via
2024-04-28T23:31:42,930           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-04-28T23:31:42,931           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-04-28T23:31:42,931           combination with a more fine grained `package-data` configuration.

2024-04-28T23:31:42,932           You can read more about "package data files" on setuptools documentation page:

2024-04-28T23:31:42,933           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-04-28T23:31:42,934           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-04-28T23:31:42,935                 even if it does not contain any `.py` files.
2024-04-28T23:31:42,936                 On the other hand, currently there is no concept of package data
2024-04-28T23:31:42,936                 directory, all directories are treated like packages.
2024-04-28T23:31:42,937           ********************************************************************************

2024-04-28T23:31:42,938   !!
2024-04-28T23:31:42,938     check.warn(importable)
2024-04-28T23:31:42,939   creating build/lib/SigProfilerMatrixGenerator/controllers
2024-04-28T23:31:42,940   copying SigProfilerMatrixGenerator/controllers/__init__.py -> build/lib/SigProfilerMatrixGenerator/controllers
2024-04-28T23:31:42,940   copying SigProfilerMatrixGenerator/controllers/cli_controller.py -> build/lib/SigProfilerMatrixGenerator/controllers
2024-04-28T23:31:42,941   creating build/lib/SigProfilerMatrixGenerator/references
2024-04-28T23:31:42,941   creating build/lib/SigProfilerMatrixGenerator/references/CNV
2024-04-28T23:31:42,942   copying SigProfilerMatrixGenerator/references/CNV/.DS_Store -> build/lib/SigProfilerMatrixGenerator/references/CNV
2024-04-28T23:31:42,942   copying SigProfilerMatrixGenerator/references/CNV/CNV_features.tsv -> build/lib/SigProfilerMatrixGenerator/references/CNV
2024-04-28T23:31:42,943   copying SigProfilerMatrixGenerator/references/CNV/CN_classes_dictionary.txt -> build/lib/SigProfilerMatrixGenerator/references/CNV
2024-04-28T23:31:42,944   creating build/lib/SigProfilerMatrixGenerator/references/CNV/example_input
2024-04-28T23:31:42,946   copying SigProfilerMatrixGenerator/references/CNV/example_input/Battenberg_test.tsv -> build/lib/SigProfilerMatrixGenerator/references/CNV/example_input
2024-04-28T23:31:42,947   copying SigProfilerMatrixGenerator/references/CNV/example_input/all.breast.ascat.summary.sample.tsv -> build/lib/SigProfilerMatrixGenerator/references/CNV/example_input
2024-04-28T23:31:42,948   creating build/lib/SigProfilerMatrixGenerator/references/CNV/example_output
2024-04-28T23:31:42,948   copying SigProfilerMatrixGenerator/references/CNV/example_output/BATTENBERG-TEST.CNV48.matrix.tsv -> build/lib/SigProfilerMatrixGenerator/references/CNV/example_output
2024-04-28T23:31:42,949   creating build/lib/SigProfilerMatrixGenerator/references/SV
2024-04-28T23:31:42,949   copying SigProfilerMatrixGenerator/references/SV/.DS_Store -> build/lib/SigProfilerMatrixGenerator/references/SV
2024-04-28T23:31:42,950   creating build/lib/SigProfilerMatrixGenerator/references/SV/example_input
2024-04-28T23:31:42,950   copying SigProfilerMatrixGenerator/references/SV/example_input/.DS_Store -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input
2024-04-28T23:31:42,951   creating build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,951   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11346a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,952   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11348a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,952   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11352a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,953   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11361a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,954   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11379a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,954   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11384a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,955   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11389a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,955   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11742a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,955   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11743a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,956   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11748a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,957   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13162a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,957   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13167a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,958   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13297a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,958   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13298a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,959   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13306a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,959   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14456a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,960   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14472a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,961   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD17973a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,961   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD18031a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,962   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD22364a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,963   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD23566a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,964   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24217a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,964   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24225a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,965   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24303a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,965   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24314a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,966   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4069a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,966   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4103a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,967   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4199a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,967   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4255a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,968   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4606a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,968   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4875a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,969   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4957a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,969   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6048a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,970   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6414a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,970   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7199a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,970   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7205a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,971   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7238a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,972   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7305a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,972   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8832a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,973   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8969a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,973   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8982a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,974   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9002a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,974   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9064a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,974   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9541a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,975   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9568a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,976   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9572a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,976   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9589a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,977   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9593a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,977   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9755a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,978   copying SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9756a.560_breast.rearrangements.n560.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:42,978   creating build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:42,979   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA130927.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:42,979   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA270468.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:42,980   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA321048.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:42,980   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA410978.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:42,981   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413642.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:42,981   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413758.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:42,982   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413928.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:42,982   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499742.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:42,983   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499746.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:42,984   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501385.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:42,984   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501469.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:42,985   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501576.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:42,985   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501599.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:42,985   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501607.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:42,986   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505478.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:42,986   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505529.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:42,987   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505768.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:42,988   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505918.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:42,991   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA507250.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:43,005   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515261.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:43,006   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515347.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:43,008   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517281.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:43,009   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517376.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:43,011   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA520203.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:43,012   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528809.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:43,013   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528848.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:43,014   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528876.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:43,015   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528947.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:43,016   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529739.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:43,018   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529747.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:43,020   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529774.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:43,021   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529837.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:43,022   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530440.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:43,023   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530512.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:43,024   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530594.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:43,026   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530642.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:43,027   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA533704.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:43,028   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538871.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:43,029   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538992.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:43,031   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA539008.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:43,032   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541765.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:43,033   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541894.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:43,035   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542155.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:43,036   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542181.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:43,038   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542577.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:43,038   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542830.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:43,039   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542879.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:43,039   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA569081.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:43,041   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570843.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:43,042   copying SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570896.bedpe.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:43,044   creating build/lib/SigProfilerMatrixGenerator/references/SV/example_output
2024-04-28T23:31:43,046   copying SigProfilerMatrixGenerator/references/SV/example_output/560-Breast.SV32.annotated.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_output
2024-04-28T23:31:43,047   copying SigProfilerMatrixGenerator/references/SV/example_output/560-Breast.SV32.matrix.tsv -> build/lib/SigProfilerMatrixGenerator/references/SV/example_output
2024-04-28T23:31:43,049   copying SigProfilerMatrixGenerator/references/SV/example_output/560-Breast_RS32_counts_aggregated.pdf -> build/lib/SigProfilerMatrixGenerator/references/SV/example_output
2024-04-28T23:31:43,049   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes
2024-04-28T23:31:43,050   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,051   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,051   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,052   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,054   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,057   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,061   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,064   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,066   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,074   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,081   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,083   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,086   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,089   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,091   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,094   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,096   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,098   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,103   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,107   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,109   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,111   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,114   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,117   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,119   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,129   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,349   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,351   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,354   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,358   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,361   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,364   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,368   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,372   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,379   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,385   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,388   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,391   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,395   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,399   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,402   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,413   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,422   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,425   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,429   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,432   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,436   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,439   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,442   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,445   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,454   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,460   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,464   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,468   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,472   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,476   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,479   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,491   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,501   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,504   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,508   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,511   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,514   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,517   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,520   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,523   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,528   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,533   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,536   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,539   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,543   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,547   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,550   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,562   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,572   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,574   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,577   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,579   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_1536.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,583   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_192.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,586   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_24.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,588   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_384.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,591   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,593   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6144.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,599   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_96.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,601   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,604   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS186.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,606   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,612   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,618   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,627   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,635   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,637   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,639   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,641   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,643   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,646   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,649   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,653   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,656   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,672   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,685   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,703   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,729   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,731   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,733   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,735   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,737   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,739   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,745   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,748   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,751   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,754   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_BED.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,756   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,759   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,761   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,764   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,766   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,768   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,771   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,773   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,779   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,787   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,795   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,802   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,804   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,807   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,809   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,811   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,814   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,817   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,821   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,824   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,840   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,853   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,870   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,893   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,895   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,898   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,900   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,902   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,905   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,909   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,912   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,915   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,918   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,921   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,924   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,927   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_exome_old.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,930   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,933   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,936   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,939   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,944   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,948   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,958   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,968   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,971   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,973   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,976   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,978   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,982   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,986   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,990   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:43,994   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,005   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,016   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,033   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,055   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,057   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,059   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,061   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,063   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,066   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,069   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,072   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,074   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,077   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,080   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,082   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,084   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,086   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,089   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,091   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,097   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,103   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,113   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,123   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,126   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,129   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,131   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,133   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,137   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,140   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,143   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,146   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,158   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,171   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,189   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,214   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,216   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,218   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,220   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,222   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,225   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,228   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,230   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,233   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,235   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,238   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,241   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,244   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,246   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,248   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,250   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,253   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,257   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,262   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,268   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,274   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,277   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,279   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,283   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,285   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,290   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,294   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,300   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,309   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,331   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,347   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,368   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,384   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,387   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,390   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,392   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,395   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,398   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,401   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,404   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male_exome.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,407   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_signatures_96.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,412   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_1536_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,419   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_192_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,423   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_24_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,426   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_384_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,430   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6144_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,447   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,449   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_96_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,452   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS186_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,455   copying SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS_female.csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:44,458   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome
2024-04-28T23:31:44,459   copying SigProfilerMatrixGenerator/references/chromosomes/exome/__init__.py -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome
2024-04-28T23:31:44,461   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37
2024-04-28T23:31:44,462   copying SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37/GRCh37_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37
2024-04-28T23:31:44,778   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38
2024-04-28T23:31:44,779   copying SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38/GRCh38_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38
2024-04-28T23:31:44,861   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans
2024-04-28T23:31:44,862   copying SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans/c_elegans_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans
2024-04-28T23:31:45,046   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/dog
2024-04-28T23:31:45,047   copying SigProfilerMatrixGenerator/references/chromosomes/exome/dog/dog_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/dog
2024-04-28T23:31:45,117   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2024-04-28T23:31:45,118   copying SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/ebv_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2024-04-28T23:31:45,120   copying SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/multipleVariableTesting_mar12_2020.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2024-04-28T23:31:45,122   copying SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/tcga_cyclic_regions(AutoRecovered).csv -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2024-04-28T23:31:45,125   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm10
2024-04-28T23:31:45,126   copying SigProfilerMatrixGenerator/references/chromosomes/exome/mm10/mm10_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm10
2024-04-28T23:31:45,201   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm39
2024-04-28T23:31:45,202   copying SigProfilerMatrixGenerator/references/chromosomes/exome/mm39/mm39_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm39
2024-04-28T23:31:45,284   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm9
2024-04-28T23:31:45,284   copying SigProfilerMatrixGenerator/references/chromosomes/exome/mm9/mm9_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm9
2024-04-28T23:31:45,356   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/rn6
2024-04-28T23:31:45,357   copying SigProfilerMatrixGenerator/references/chromosomes/exome/rn6/rn6_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/rn6
2024-04-28T23:31:45,799   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/yeast
2024-04-28T23:31:45,800   copying SigProfilerMatrixGenerator/references/chromosomes/exome/yeast/yeast_exome.interval_list -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/yeast
2024-04-28T23:31:45,806   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts
2024-04-28T23:31:45,807   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/__init__.py -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts
2024-04-28T23:31:45,809   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:45,809   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:45,815   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:45,823   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:45,834   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:45,840   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:45,845   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:45,861   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:45,875   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:45,892   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:45,898   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:45,908   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:45,919   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/20_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:45,924   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/21_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:45,928   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/22_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:45,932   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:45,942   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:45,950   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:45,956   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:45,962   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:45,970   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:45,976   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:45,983   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:45,990   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:45,991   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:45,997   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:46,000   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:46,000   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:46,007   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:46,019   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:46,030   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:46,034   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:46,044   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:46,049   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:46,057   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:46,065   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:46,069   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:46,079   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:46,090   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/20_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:46,094   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/21_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:46,098   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/22_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:46,103   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:46,114   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:46,125   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:46,132   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:46,138   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:46,147   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:46,156   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:46,162   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:46,167   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:46,169   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:46,176   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:46,179   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-04-28T23:31:46,180   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/III_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-04-28T23:31:46,189   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/II_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-04-28T23:31:46,197   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/IV_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-04-28T23:31:46,208   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/I_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-04-28T23:31:46,218   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/MtDNA_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-04-28T23:31:46,220   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/V_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-04-28T23:31:46,234   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-04-28T23:31:46,244   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,245   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,249   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,252   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,256   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,259   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,262   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,265   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,269   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,272   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,276   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,279   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,283   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/20_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,288   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/21_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,291   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/22_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,294   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/23_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,297   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/24_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,301   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/25_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,304   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/26_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,308   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/27_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,311   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/28_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,314   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/29_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,317   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,321   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/30_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,325   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/31_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,327   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/32_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,330   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/33_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,333   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/34_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,336   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/35_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,338   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/36_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,341   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/37_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,344   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/38_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,346   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,350   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,353   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,358   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,362   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,366   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,370   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,375   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:46,379   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv
2024-04-28T23:31:46,380   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv/gi_82503188_ref_NC_007605_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv
2024-04-28T23:31:46,383   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:46,384   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:46,389   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:46,397   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:46,402   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:46,409   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:46,415   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:46,421   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:46,427   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:46,434   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:46,439   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:46,444   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:46,452   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:46,460   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:46,466   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:46,473   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:46,481   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:46,488   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:46,498   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:46,504   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:46,511   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:46,514   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:46,521   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:46,524   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:46,526   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:46,536   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:46,550   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:46,558   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:46,566   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:46,575   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:46,583   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:46,590   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:46,597   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:46,601   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:46,606   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:46,613   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:46,625   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:46,632   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:46,641   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:46,650   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:46,657   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:46,666   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:46,672   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:46,679   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:46,685   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:46,688   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:46,689   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:46,696   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:46,712   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:46,719   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:46,727   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:46,734   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:46,742   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:46,750   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:46,760   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:46,767   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:46,776   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:46,790   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:46,805   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:46,812   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:46,824   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:46,833   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:46,841   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:46,853   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:46,861   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:46,870   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:46,872   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:46,883   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:46,885   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:46,887   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:46,894   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:46,898   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:46,903   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:46,907   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:46,912   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:46,917   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:46,921   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:46,926   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:46,931   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:46,935   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:46,945   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/20_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:46,949   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:46,954   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:46,961   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:46,966   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:46,972   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:46,977   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:46,982   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:46,987   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:46,990   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:46,993   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:46,997   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:46,999   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:47,001   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/10_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:47,009   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/11_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:47,014   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/12_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:47,018   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/13_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:47,023   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/14_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:47,028   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/15_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:47,033   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/16_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:47,038   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/17_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:47,043   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/18_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:47,048   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/19_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:47,052   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/1_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:47,063   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/20_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:47,068   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/2_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:47,075   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/3_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:47,082   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/4_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:47,090   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/5_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:47,097   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/6_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:47,102   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/7_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:47,109   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/8_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:47,116   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/9_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:47,121   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/MT_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:47,123   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:47,129   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/Y_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:47,131   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:47,132   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/III_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:47,135   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/II_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:47,138   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IV_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:47,141   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IX_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:47,144   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/I_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:47,147   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/M_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:47,149   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VIII_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:47,152   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VII_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:47,155   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VI_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:47,157   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/V_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:47,160   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIII_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:47,163   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XII_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:47,166   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIV_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:47,170   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XI_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:47,173   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XVI_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:47,176   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XV_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:47,179   copying SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/X_transcripts.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:47,182   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED
2024-04-28T23:31:47,183   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/__init__.py -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED
2024-04-28T23:31:47,185   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:47,187   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:47,190   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:47,195   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:47,198   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:47,202   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:47,205   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:47,208   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:47,212   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:47,216   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:47,220   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:47,224   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:47,229   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/20_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:47,232   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/21_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:47,235   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/22_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:47,238   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:47,242   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:47,246   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:47,250   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:47,253   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:47,257   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:47,260   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:47,263   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:47,266   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:47,270   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:47,272   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:47,273   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:47,276   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:47,280   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:47,283   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:47,286   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:47,289   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:47,291   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:47,295   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:47,298   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:47,301   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:47,304   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:47,308   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/20_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:47,311   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/21_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:47,313   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/22_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:47,316   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:47,319   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:47,322   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:47,325   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:47,329   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:47,332   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:47,335   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:47,338   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:47,341   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:47,344   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:47,346   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-04-28T23:31:47,347   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/III_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-04-28T23:31:47,351   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/II_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-04-28T23:31:47,357   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/IV_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-04-28T23:31:47,362   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/I_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-04-28T23:31:47,366   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/MtDNA_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-04-28T23:31:47,368   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/V_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-04-28T23:31:47,374   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-04-28T23:31:47,378   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,379   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,381   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,385   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,387   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,390   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,393   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,396   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,399   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,402   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,405   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,407   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,411   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/20_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,414   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/21_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,417   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/22_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,419   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/23_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,423   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/24_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,426   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/25_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,429   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/26_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,432   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/27_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,435   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/28_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,438   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/29_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,441   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,444   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/30_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,447   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/31_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,450   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/32_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,453   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/33_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,456   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/34_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,459   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/35_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,461   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/36_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,464   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/37_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,467   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/38_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,470   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,473   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,477   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,480   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,484   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,487   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,490   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,493   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:47,496   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:47,497   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:47,500   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:47,504   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:47,508   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:47,512   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:47,516   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:47,519   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:47,523   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:47,526   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:47,530   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:47,533   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:47,538   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:47,543   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:47,546   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:47,551   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:47,555   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:47,560   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:47,565   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:47,569   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:47,574   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:47,578   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:47,581   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:47,583   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:47,587   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:47,592   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:47,597   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:47,601   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:47,606   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:47,610   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:47,614   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:47,618   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:47,621   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:47,625   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:47,629   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:47,634   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:47,638   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:47,642   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:47,647   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:47,651   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:47,656   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:47,660   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:47,665   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:47,669   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:47,672   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:47,673   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:47,677   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:47,682   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:47,685   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:47,690   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:47,694   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:47,698   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:47,702   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:47,706   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:47,709   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:47,712   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:47,715   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:47,720   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:47,723   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:47,727   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:47,730   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:47,734   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:47,739   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:47,742   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:47,750   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:47,753   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:47,755   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:47,756   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:47,761   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:47,765   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:47,768   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:47,771   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:47,774   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:47,777   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:47,779   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:47,783   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:47,785   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:47,788   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:47,793   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/20_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:47,796   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:47,800   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:47,803   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:47,807   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:47,811   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:47,814   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:47,817   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:47,821   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:47,824   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/MT_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:47,826   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:47,829   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:47,831   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:47,832   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/10_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:47,837   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/11_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:47,840   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/12_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:47,843   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/13_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:47,846   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/14_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:47,850   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/15_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:47,853   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/16_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:47,856   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/17_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:47,860   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/18_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:47,862   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/19_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:47,866   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/1_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:47,871   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/20_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:47,874   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/2_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:47,877   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/3_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:47,882   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/4_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:47,886   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/5_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:47,891   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/6_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:47,895   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/7_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:47,899   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/8_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:47,904   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/9_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:47,908   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/MT_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:47,910   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:47,914   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/Y_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:47,917   creating build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:47,918   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/III_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:47,921   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/II_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:47,924   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IV_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:47,928   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IX_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:47,931   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/I_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:47,933   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VIII_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:47,936   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VII_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:47,940   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VI_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:47,942   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/V_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:47,945   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIII_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:47,949   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XII_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:47,952   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIV_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:47,955   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XI_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:47,959   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XVI_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:47,962   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XV_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:47,965   copying SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/X_BED_TSB.txt -> build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:47,969   creating build/lib/SigProfilerMatrixGenerator/scripts
2024-04-28T23:31:47,970   copying SigProfilerMatrixGenerator/scripts/CNVMatrixGenerator.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-04-28T23:31:47,973   copying SigProfilerMatrixGenerator/scripts/MutationMatrixGenerator.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-04-28T23:31:47,980   copying SigProfilerMatrixGenerator/scripts/SVMatrixGenerator.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-04-28T23:31:47,983   copying SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGeneratorFunc.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-04-28T23:31:47,988   copying SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGenerator_CLI.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-04-28T23:31:47,990   copying SigProfilerMatrixGenerator/scripts/__init__.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-04-28T23:31:47,992   copying SigProfilerMatrixGenerator/scripts/convert_input_to_simple_files.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-04-28T23:31:47,997   copying SigProfilerMatrixGenerator/scripts/ref_install.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-04-28T23:31:47,999   copying SigProfilerMatrixGenerator/scripts/reference_genome_manager.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-04-28T23:31:48,002   copying SigProfilerMatrixGenerator/scripts/save_chrom_strings.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-04-28T23:31:48,005   copying SigProfilerMatrixGenerator/scripts/save_chrom_tsb_separate.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-04-28T23:31:48,008   copying SigProfilerMatrixGenerator/scripts/save_context_distribution.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-04-28T23:31:48,011   copying SigProfilerMatrixGenerator/scripts/save_tsb_192.py -> build/lib/SigProfilerMatrixGenerator/scripts
2024-04-28T23:31:48,014   creating build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-04-28T23:31:48,015   copying SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_3072.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-04-28T23:31:48,020   copying SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_96.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-04-28T23:31:48,022   copying SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_3072.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-04-28T23:31:48,025   copying SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_96.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-04-28T23:31:48,027   copying SigProfilerMatrixGenerator/scripts/Benchmark/__init__.py -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-04-28T23:31:48,029   copying SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_3072.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-04-28T23:31:48,033   copying SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_96.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-04-28T23:31:48,035   copying SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_3072.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-04-28T23:31:48,038   copying SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_96.txt -> build/lib/SigProfilerMatrixGenerator/scripts/Benchmark
2024-04-28T23:31:48,067   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2024-04-28T23:31:48,067   !!

2024-04-28T23:31:48,068           ********************************************************************************
2024-04-28T23:31:48,069           Please avoid running ``setup.py`` directly.
2024-04-28T23:31:48,070           Instead, use pypa/build, pypa/installer or other
2024-04-28T23:31:48,070           standards-based tools.

2024-04-28T23:31:48,071           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2024-04-28T23:31:48,072           ********************************************************************************

2024-04-28T23:31:48,073   !!
2024-04-28T23:31:48,073     self.initialize_options()
2024-04-28T23:31:48,092   installing to build/bdist.linux-armv7l/wheel
2024-04-28T23:31:48,092   running install
2024-04-28T23:31:48,116   running install_lib
2024-04-28T23:31:48,140   creating build/bdist.linux-armv7l
2024-04-28T23:31:48,141   creating build/bdist.linux-armv7l/wheel
2024-04-28T23:31:48,142   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator
2024-04-28T23:31:48,144   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references
2024-04-28T23:31:48,145   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV
2024-04-28T23:31:48,147   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input
2024-04-28T23:31:48,149   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,150   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD18031a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,153   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9589a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,154   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13298a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,157   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9568a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,159   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD17973a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,161   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11379a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,163   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11352a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,165   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4103a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,168   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13167a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,170   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7305a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,173   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11346a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,175   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9572a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,177   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24217a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,179   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24303a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,181   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11748a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,184   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13306a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,185   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11361a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,187   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9756a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,189   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4606a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,190   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14456a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,192   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9755a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,194   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13162a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,196   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9593a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,198   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6048a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,200   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11384a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,202   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11743a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,204   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4069a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,205   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7205a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,208   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7238a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,210   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4199a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,212   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8969a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,214   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD23566a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,217   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7199a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,219   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8982a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,221   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13297a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,224   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11742a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,226   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4255a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,228   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4875a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,230   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14472a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,232   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9002a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,234   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24314a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,237   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9064a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,239   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11389a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,241   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11348a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,243   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD22364a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,245   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6414a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,247   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24225a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,249   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4957a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,251   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8832a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,253   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9541a.560_breast.rearrangements.n560.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/560-Breast
2024-04-28T23:31:48,256   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,257   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501599.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,259   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501469.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,261   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499742.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,263   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501576.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,265   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505529.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,268   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529747.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,270   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA130927.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,272   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529739.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,274   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515347.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,277   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505478.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,280   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA520203.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,282   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529837.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,285   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA507250.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,287   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499746.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,289   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528876.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,293   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528947.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,295   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530642.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,297   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542879.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,299   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541894.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,301   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517376.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,303   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA321048.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,305   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530440.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,307   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA539008.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,309   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413642.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,310   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505918.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,313   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA569081.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,316   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570896.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,317   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529774.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,320   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501607.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,322   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515261.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,324   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505768.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,327   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542155.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,329   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570843.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,331   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501385.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,333   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538871.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,337   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542830.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,339   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA270468.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,341   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530594.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,344   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA410978.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,345   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413758.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,347   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542181.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,349   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517281.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,351   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528809.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,353   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542577.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,355   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530512.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,358   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413928.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,359   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528848.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,362   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA533704.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,364   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538992.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,366   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541765.bedpe.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input/PCAWG
2024-04-28T23:31:48,368   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_input/.DS_Store -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_input
2024-04-28T23:31:48,370   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_output
2024-04-28T23:31:48,371   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_output/560-Breast.SV32.annotated.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_output
2024-04-28T23:31:48,383   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_output/560-Breast_RS32_counts_aggregated.pdf -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_output
2024-04-28T23:31:48,386   copying build/lib/SigProfilerMatrixGenerator/references/SV/example_output/560-Breast.SV32.matrix.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV/example_output
2024-04-28T23:31:48,388   copying build/lib/SigProfilerMatrixGenerator/references/SV/.DS_Store -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/SV
2024-04-28T23:31:48,391   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes
2024-04-28T23:31:48,392   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts
2024-04-28T23:31:48,394   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:48,395   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/17_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:48,399   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/12_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:48,402   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/5_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:48,407   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/18_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:48,410   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/Y_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:48,413   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:48,417   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/14_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:48,422   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/3_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:48,429   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/6_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:48,434   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/10_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:48,442   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/20_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:48,446   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/9_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:48,451   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/11_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:48,456   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/2_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:48,462   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/8_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:48,469   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/15_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:48,474   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/1_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:48,486   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/7_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:48,492   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/19_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:48,495   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/MT_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:48,498   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/16_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:48,502   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/4_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:48,509   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/13_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6
2024-04-28T23:31:48,513   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:48,514   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/17_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:48,522   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/12_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:48,531   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/5_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:48,537   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/18_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:48,542   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/Y_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:48,544   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:48,550   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/14_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:48,556   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/3_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:48,563   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/6_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:48,574   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/10_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:48,579   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/20_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:48,583   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/21_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:48,587   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/22_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:48,591   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/9_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:48,596   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/11_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:48,606   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/2_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:48,615   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/8_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:48,621   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/15_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:48,627   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/1_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:48,638   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/7_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:48,646   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/19_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:48,658   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/MT_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:48,660   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/16_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:48,669   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/4_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:48,675   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/13_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37
2024-04-28T23:31:48,679   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/__init__.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts
2024-04-28T23:31:48,681   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:48,682   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/17_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:48,689   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/12_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:48,693   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/5_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:48,702   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/18_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:48,707   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/Y_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:48,710   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:48,716   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/14_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:48,721   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/3_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:48,727   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/6_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:48,734   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/10_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:48,739   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/9_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:48,746   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/11_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:48,754   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/2_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:48,762   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/8_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:48,768   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/15_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:48,776   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/1_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:48,787   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/7_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:48,797   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/19_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:48,801   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/MT_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:48,802   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/16_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:48,807   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/4_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:48,814   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/13_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10
2024-04-28T23:31:48,819   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:48,820   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIV_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:48,823   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:48,826   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XII_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:48,830   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XV_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:48,833   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/M_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:48,835   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IX_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:48,838   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XVI_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:48,841   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VIII_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:48,843   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IV_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:48,846   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VII_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:48,849   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XI_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:48,852   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/II_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:48,854   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/III_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:48,857   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VI_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:48,859   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIII_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:48,861   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/I_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:48,863   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/V_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast
2024-04-28T23:31:48,867   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:48,867   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/17_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:48,876   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/12_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:48,884   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/5_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:48,891   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/18_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:48,896   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/Y_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:48,898   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:48,904   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/14_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:48,910   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/3_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:48,919   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/6_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:48,926   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/10_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:48,932   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/20_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:48,937   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/21_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:48,941   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/22_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:48,947   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/9_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:48,954   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/11_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:48,966   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/2_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:48,977   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/8_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:48,985   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/15_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:48,992   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/1_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:49,004   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/7_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:49,011   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/19_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:49,021   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/MT_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:49,023   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/16_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:49,029   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/4_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:49,035   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/13_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38
2024-04-28T23:31:49,040   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv
2024-04-28T23:31:49,041   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv/gi_82503188_ref_NC_007605_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv
2024-04-28T23:31:49,044   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:49,045   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/17_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:49,050   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/12_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:49,054   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/5_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:49,060   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/18_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:49,063   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/Y_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:49,065   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:49,070   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/14_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:49,075   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/3_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:49,082   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/6_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:49,087   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/10_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:49,095   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/20_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:49,099   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/9_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:49,103   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/11_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:49,107   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/2_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:49,114   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/8_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:49,120   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/15_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:49,126   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/1_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:49,138   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/7_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:49,144   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/19_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:49,148   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/MT_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:49,150   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/16_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:49,155   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/4_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:49,162   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/13_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7
2024-04-28T23:31:49,168   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,169   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/17_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,173   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/29_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,177   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/38_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,181   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/12_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,185   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/35_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,189   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/5_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,196   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/25_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,199   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/18_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,202   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,206   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/14_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,209   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/3_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,212   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/6_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,217   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/10_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,222   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/20_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,226   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/21_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,230   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/22_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,233   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/9_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,240   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/11_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,245   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/33_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,249   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/2_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,254   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/24_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,259   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/28_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,263   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/26_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,268   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/27_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,273   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/8_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,278   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/15_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,283   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/1_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,291   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/7_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,297   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/19_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,301   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/37_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,304   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/34_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,308   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/16_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,312   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/30_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,315   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/23_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,318   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/4_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,322   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/13_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,326   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/31_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,329   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/32_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,332   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/36_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog
2024-04-28T23:31:49,336   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:49,337   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/17_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:49,345   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/12_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:49,351   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/5_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:49,360   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/18_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:49,364   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/Y_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:49,366   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:49,371   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/14_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:49,377   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/3_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:49,384   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/6_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:49,393   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/10_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:49,400   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/9_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:49,406   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/11_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:49,414   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/2_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:49,422   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/8_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:49,427   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/15_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:49,432   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/1_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:49,438   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/7_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:49,448   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/19_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:49,453   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/16_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:49,458   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/4_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:49,464   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/13_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39
2024-04-28T23:31:49,470   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-04-28T23:31:49,471   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-04-28T23:31:49,481   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/IV_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-04-28T23:31:49,494   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/MtDNA_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-04-28T23:31:49,495   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/II_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-04-28T23:31:49,503   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/III_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-04-28T23:31:49,510   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/I_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-04-28T23:31:49,517   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/V_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans
2024-04-28T23:31:49,528   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:49,529   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/17_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:49,536   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/12_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:49,541   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/5_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:49,549   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/18_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:49,553   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/Y_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:49,555   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/X_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:49,561   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/14_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:49,567   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/3_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:49,574   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/6_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:49,582   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/10_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:49,588   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/9_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:49,598   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/11_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:49,609   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/2_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:49,622   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/8_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:49,631   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/15_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:49,642   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/1_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:49,657   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/7_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:49,679   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/19_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:49,686   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/MT_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:49,688   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/16_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:49,695   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/4_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:49,709   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/13_transcripts.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9
2024-04-28T23:31:49,722   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,723   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,726   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,729   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,732   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,734   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,736   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,739   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,741   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,756   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,763   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,772   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,774   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,777   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_96_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,780   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,786   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,812   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_signatures_96.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,815   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,818   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,820   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,823   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,826   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,831   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,837   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,839   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,843   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,861   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,867   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,869   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,872   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,873   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,875   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS186_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,877   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,885   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,887   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,889   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,891   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,894   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,900   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,902   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,905   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,907   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,910   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,912   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,918   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,925   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,927   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,929   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,931   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,935   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,938   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,954   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,956   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_1536_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,962   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,970   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,974   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,977   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,979   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,983   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_192.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,986   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,988   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,993   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,995   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS186.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:49,998   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,000   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,003   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,005   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,008   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,011   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,030   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6144.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,038   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,041   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,043   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,046   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,055   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_1536.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,059   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,061   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,068   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,070   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,072   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,075   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,079   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,081   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,108   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_96.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,110   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,112   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,115   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,117   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,123   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,125   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,127   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,129   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,131   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,133   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,154   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,165   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,171   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,173   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,175   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,177   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,191   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,193   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,195   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,197   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,199   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,204   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,209   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,211   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,225   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,232   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,240   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,243   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,247   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,249   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,251   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,254   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,256   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,258   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,260   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,274   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,276   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,282   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,285   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,287   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,294   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,299   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,301   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,303   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,305   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,309   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,311   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,312   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,315   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_192_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,320   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,322   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,329   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,331   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,333   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,344   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,360   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,362   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,364   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,366   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_384.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,368   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,370   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,372   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,374   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,377   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,383   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6144_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,396   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,413   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,415   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,418   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,419   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,421   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,423   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,429   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,431   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,433   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,436   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,438   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,442   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,444   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_24_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,446   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,447   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,449   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,452   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,455   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,458   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,461   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,463   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,464   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,466   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,469   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,471   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,475   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,478   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_24.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,479   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,482   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,484   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,486   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,488   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,491   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,493   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,496   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,498   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,509   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,515   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,522   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,527   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,538   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,542   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,544   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,546   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,548   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,550   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,552   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,555   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,558   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,561   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,565   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,568   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,570   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,572   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,577   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,580   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,583   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,586   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,589   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,590   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,594   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,599   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_384_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,603   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,605   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,607   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,609   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,611   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,613   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,614   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,616   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,618   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,620   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,631   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,656   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,672   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_exome_old.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,674   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,677   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,680   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,689   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,691   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,694   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,696   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,699   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,700   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,702   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,708   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,710   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_BED.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,712   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,715   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,717   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,719   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,721   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,723   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,735   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,738   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,740   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,743   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,746   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male_exome.csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/context_distributions
2024-04-28T23:31:50,749   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome
2024-04-28T23:31:50,750   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/rn6
2024-04-28T23:31:50,751   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/rn6/rn6_exome.interval_list -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/rn6
2024-04-28T23:31:51,180   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37
2024-04-28T23:31:51,181   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37/GRCh37_exome.interval_list -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37
2024-04-28T23:31:51,473   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/__init__.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome
2024-04-28T23:31:51,475   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/mm10
2024-04-28T23:31:51,476   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm10/mm10_exome.interval_list -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/mm10
2024-04-28T23:31:51,546   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/yeast
2024-04-28T23:31:51,547   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/yeast/yeast_exome.interval_list -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/yeast
2024-04-28T23:31:51,553   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38
2024-04-28T23:31:51,554   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38/GRCh38_exome.interval_list -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38
2024-04-28T23:31:51,630   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2024-04-28T23:31:51,631   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/ebv_exome.interval_list -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2024-04-28T23:31:51,633   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/tcga_cyclic_regions(AutoRecovered).csv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2024-04-28T23:31:51,635   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/multipleVariableTesting_mar12_2020.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/ebv
2024-04-28T23:31:51,638   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/dog
2024-04-28T23:31:51,639   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/dog/dog_exome.interval_list -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/dog
2024-04-28T23:31:51,703   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/mm39
2024-04-28T23:31:51,704   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm39/mm39_exome.interval_list -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/mm39
2024-04-28T23:31:51,774   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans
2024-04-28T23:31:51,775   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans/c_elegans_exome.interval_list -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans
2024-04-28T23:31:52,064   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/mm9
2024-04-28T23:31:52,065   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/exome/mm9/mm9_exome.interval_list -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/exome/mm9
2024-04-28T23:31:52,173   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED
2024-04-28T23:31:52,175   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:52,176   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/2_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:52,180   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/Y_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:52,182   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/3_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:52,188   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/8_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:52,192   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/10_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:52,196   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/18_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:52,198   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:52,201   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/16_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:52,204   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/17_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:52,207   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/13_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:52,210   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/20_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:52,213   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/6_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:52,216   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/5_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:52,221   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/15_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:52,224   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/12_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:52,228   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/4_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:52,232   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/1_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:52,237   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/7_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:52,241   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/11_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:52,244   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/14_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:52,247   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/9_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:52,250   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/19_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:52,253   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/MT_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6
2024-04-28T23:31:52,255   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:52,256   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/2_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:52,260   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/Y_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:52,262   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/3_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:52,265   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/8_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:52,268   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/10_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:52,271   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/18_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:52,273   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:52,277   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/16_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:52,280   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/17_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:52,283   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/13_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:52,285   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/20_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:52,288   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/6_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:52,291   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/5_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:52,294   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/15_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:52,296   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/12_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:52,299   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/4_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:52,302   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/1_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:52,306   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/7_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:52,309   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/11_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:52,311   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/22_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:52,314   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/14_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:52,317   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/9_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:52,320   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/21_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:52,323   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/19_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37
2024-04-28T23:31:52,326   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/__init__.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED
2024-04-28T23:31:52,328   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:52,329   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/2_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:52,333   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/Y_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:52,336   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/3_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:52,339   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/8_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:52,342   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/10_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:52,346   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/18_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:52,349   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:52,353   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/16_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:52,357   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/17_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:52,361   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/13_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:52,364   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/6_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:52,369   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/5_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:52,373   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/15_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:52,377   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/12_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:52,381   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/4_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:52,385   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/1_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:52,390   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/7_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:52,396   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/11_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:52,401   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/14_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:52,405   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/9_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:52,409   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/19_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10
2024-04-28T23:31:52,414   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:52,416   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/V_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:52,419   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VIII_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:52,423   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:52,426   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XVI_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:52,430   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/I_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:52,433   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XI_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:52,437   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IX_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:52,440   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VII_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:52,444   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VI_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:52,446   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IV_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:52,450   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XV_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:52,453   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XII_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:52,456   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/III_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:52,459   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/II_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:52,462   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIV_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:52,466   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIII_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast
2024-04-28T23:31:52,470   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:52,471   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/2_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:52,475   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/Y_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:52,478   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/3_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:52,482   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/8_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:52,485   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/10_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:52,489   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/18_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:52,492   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:52,495   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/16_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:52,499   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/17_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:52,503   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/13_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:52,506   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/20_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:52,509   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/6_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:52,513   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/5_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:52,517   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/15_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:52,520   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/12_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:52,523   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/4_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:52,526   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/1_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:52,529   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/7_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:52,532   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/11_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:52,536   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/22_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:52,539   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/14_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:52,541   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/9_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:52,544   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/21_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:52,546   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/19_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38
2024-04-28T23:31:52,550   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:52,551   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/2_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:52,555   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/Y_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:52,557   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/3_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:52,561   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/8_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:52,564   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/10_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:52,568   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/18_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:52,571   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:52,574   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/16_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:52,577   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/17_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:52,580   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/13_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:52,583   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/20_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:52,586   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/6_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:52,589   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/5_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:52,593   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/15_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:52,596   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/12_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:52,599   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/4_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:52,602   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/1_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:52,607   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/7_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:52,610   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/11_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:52,613   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/14_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:52,615   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/9_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:52,618   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/19_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:52,621   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/MT_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7
2024-04-28T23:31:52,623   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,625   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/2_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,628   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/24_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,632   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/3_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,636   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/27_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,639   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/23_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,641   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/8_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,644   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/10_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,647   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/35_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,649   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/32_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,652   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/18_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,655   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,657   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/16_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,659   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/17_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,662   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/13_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,665   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/20_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,667   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/28_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,670   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/6_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,673   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/5_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,675   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/26_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,678   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/15_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,681   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/12_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,683   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/4_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,686   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/38_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,689   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/25_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,692   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/1_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,695   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/7_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,698   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/34_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,701   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/31_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,703   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/33_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,705   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/11_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,709   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/29_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,713   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/22_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,715   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/30_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,717   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/14_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,720   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/9_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,723   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/21_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,725   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/37_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,727   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/19_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,730   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/36_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog
2024-04-28T23:31:52,732   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:52,733   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/2_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:52,738   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/Y_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:52,740   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/3_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:52,743   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/8_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:52,746   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/10_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:52,749   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/18_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:52,752   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:52,755   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/16_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:52,757   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/17_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:52,761   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/13_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:52,763   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/6_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:52,767   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/5_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:52,770   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/15_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:52,773   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/12_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:52,775   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/4_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:52,778   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/1_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:52,781   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/7_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:52,785   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/11_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:52,788   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/14_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:52,791   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/9_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:52,794   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/19_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39
2024-04-28T23:31:52,798   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-04-28T23:31:52,799   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/V_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-04-28T23:31:52,804   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/MtDNA_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-04-28T23:31:52,806   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-04-28T23:31:52,811   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/I_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-04-28T23:31:52,816   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/IV_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-04-28T23:31:52,822   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/III_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-04-28T23:31:52,827   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/II_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans
2024-04-28T23:31:52,832   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:52,833   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/2_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:52,836   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/Y_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:52,838   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/3_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:52,841   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/8_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:52,844   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/10_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:52,847   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/18_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:52,850   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/X_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:52,853   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/16_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:52,856   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/17_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:52,859   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/13_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:52,862   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/6_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:52,865   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/5_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:52,869   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/15_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:52,872   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/12_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:52,875   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/4_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:52,878   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/1_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:52,881   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/7_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:52,886   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/11_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:52,892   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/14_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:52,899   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/9_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:52,906   copying build/lib/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/19_BED_TSB.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9
2024-04-28T23:31:52,913   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/CNV
2024-04-28T23:31:52,914   copying build/lib/SigProfilerMatrixGenerator/references/CNV/CNV_features.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/CNV
2024-04-28T23:31:52,916   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/CNV/example_input
2024-04-28T23:31:52,917   copying build/lib/SigProfilerMatrixGenerator/references/CNV/example_input/Battenberg_test.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/CNV/example_input
2024-04-28T23:31:52,932   copying build/lib/SigProfilerMatrixGenerator/references/CNV/example_input/all.breast.ascat.summary.sample.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/CNV/example_input
2024-04-28T23:31:52,941   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/CNV/example_output
2024-04-28T23:31:52,941   copying build/lib/SigProfilerMatrixGenerator/references/CNV/example_output/BATTENBERG-TEST.CNV48.matrix.tsv -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/CNV/example_output
2024-04-28T23:31:52,944   copying build/lib/SigProfilerMatrixGenerator/references/CNV/CN_classes_dictionary.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/CNV
2024-04-28T23:31:52,946   copying build/lib/SigProfilerMatrixGenerator/references/CNV/.DS_Store -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/references/CNV
2024-04-28T23:31:52,948   copying build/lib/SigProfilerMatrixGenerator/install.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator
2024-04-28T23:31:52,950   copying build/lib/SigProfilerMatrixGenerator/__init__.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator
2024-04-28T23:31:52,953   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts
2024-04-28T23:31:52,953   copying build/lib/SigProfilerMatrixGenerator/scripts/reference_genome_manager.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts
2024-04-28T23:31:52,956   copying build/lib/SigProfilerMatrixGenerator/scripts/save_tsb_192.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts
2024-04-28T23:31:52,959   copying build/lib/SigProfilerMatrixGenerator/scripts/__init__.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts
2024-04-28T23:31:52,960   copying build/lib/SigProfilerMatrixGenerator/scripts/save_context_distribution.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts
2024-04-28T23:31:52,963   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts/Benchmark
2024-04-28T23:31:52,964   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_3072.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts/Benchmark
2024-04-28T23:31:52,968   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_96.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts/Benchmark
2024-04-28T23:31:52,970   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_96.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts/Benchmark
2024-04-28T23:31:52,972   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/__init__.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts/Benchmark
2024-04-28T23:31:52,973   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_3072.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts/Benchmark
2024-04-28T23:31:52,977   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_96.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts/Benchmark
2024-04-28T23:31:52,979   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_96.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts/Benchmark
2024-04-28T23:31:52,981   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_3072.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts/Benchmark
2024-04-28T23:31:52,984   copying build/lib/SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_3072.txt -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts/Benchmark
2024-04-28T23:31:52,988   copying build/lib/SigProfilerMatrixGenerator/scripts/MutationMatrixGenerator.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts
2024-04-28T23:31:52,993   copying build/lib/SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGenerator_CLI.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts
2024-04-28T23:31:52,995   copying build/lib/SigProfilerMatrixGenerator/scripts/save_chrom_strings.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts
2024-04-28T23:31:52,997   copying build/lib/SigProfilerMatrixGenerator/scripts/CNVMatrixGenerator.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts
2024-04-28T23:31:52,999   copying build/lib/SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGeneratorFunc.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts
2024-04-28T23:31:53,003   copying build/lib/SigProfilerMatrixGenerator/scripts/SVMatrixGenerator.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts
2024-04-28T23:31:53,006   copying build/lib/SigProfilerMatrixGenerator/scripts/save_chrom_tsb_separate.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts
2024-04-28T23:31:53,008   copying build/lib/SigProfilerMatrixGenerator/scripts/ref_install.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts
2024-04-28T23:31:53,010   copying build/lib/SigProfilerMatrixGenerator/scripts/convert_input_to_simple_files.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/scripts
2024-04-28T23:31:53,014   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/controllers
2024-04-28T23:31:53,015   copying build/lib/SigProfilerMatrixGenerator/controllers/cli_controller.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/controllers
2024-04-28T23:31:53,018   copying build/lib/SigProfilerMatrixGenerator/controllers/__init__.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator/controllers
2024-04-28T23:31:53,019   copying build/lib/SigProfilerMatrixGenerator/test_helpers.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator
2024-04-28T23:31:53,021   copying build/lib/SigProfilerMatrixGenerator/version.py -> build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator
2024-04-28T23:31:53,023   running install_egg_info
2024-04-28T23:31:53,055   Copying SigProfilerMatrixGenerator.egg-info to build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator-1.2.26-py3.11.egg-info
2024-04-28T23:31:53,071   running install_scripts
2024-04-28T23:31:53,090   creating build/bdist.linux-armv7l/wheel/SigProfilerMatrixGenerator-1.2.26.dist-info/WHEEL
2024-04-28T23:31:53,092   creating '/tmp/pip-wheel-vd4_4lxn/SigProfilerMatrixGenerator-1.2.26-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-04-28T23:31:53,094   adding 'SigProfilerMatrixGenerator/__init__.py'
2024-04-28T23:31:53,097   adding 'SigProfilerMatrixGenerator/install.py'
2024-04-28T23:31:53,098   adding 'SigProfilerMatrixGenerator/test_helpers.py'
2024-04-28T23:31:53,099   adding 'SigProfilerMatrixGenerator/version.py'
2024-04-28T23:31:53,101   adding 'SigProfilerMatrixGenerator/controllers/__init__.py'
2024-04-28T23:31:53,102   adding 'SigProfilerMatrixGenerator/controllers/cli_controller.py'
2024-04-28T23:31:53,105   adding 'SigProfilerMatrixGenerator/references/CNV/.DS_Store'
2024-04-28T23:31:53,106   adding 'SigProfilerMatrixGenerator/references/CNV/CNV_features.tsv'
2024-04-28T23:31:53,107   adding 'SigProfilerMatrixGenerator/references/CNV/CN_classes_dictionary.txt'
2024-04-28T23:31:53,279   adding 'SigProfilerMatrixGenerator/references/CNV/example_input/Battenberg_test.tsv'
2024-04-28T23:31:53,349   adding 'SigProfilerMatrixGenerator/references/CNV/example_input/all.breast.ascat.summary.sample.tsv'
2024-04-28T23:31:53,354   adding 'SigProfilerMatrixGenerator/references/CNV/example_output/BATTENBERG-TEST.CNV48.matrix.tsv'
2024-04-28T23:31:53,356   adding 'SigProfilerMatrixGenerator/references/SV/.DS_Store'
2024-04-28T23:31:53,358   adding 'SigProfilerMatrixGenerator/references/SV/example_input/.DS_Store'
2024-04-28T23:31:53,363   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11346a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,365   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11348a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,366   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11352a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,368   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11361a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,369   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11379a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,370   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11384a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,372   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11389a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,375   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11742a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,376   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11743a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,380   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD11748a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,382   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13162a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,384   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13167a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,387   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13297a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,390   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13298a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,391   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD13306a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,393   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14456a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,394   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD14472a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,395   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD17973a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,397   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD18031a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,398   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD22364a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,400   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD23566a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,402   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24217a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,403   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24225a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,405   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24303a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,406   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD24314a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,408   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4069a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,413   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4103a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,415   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4199a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,418   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4255a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,419   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4606a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,421   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4875a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,422   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD4957a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,425   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6048a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,427   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD6414a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,428   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7199a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,432   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7205a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,657   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7238a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,660   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD7305a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,663   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8832a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,665   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8969a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,670   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD8982a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,672   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9002a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,676   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9064a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,677   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9541a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,680   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9568a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,681   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9572a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,682   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9589a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,684   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9593a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,685   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9755a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,686   adding 'SigProfilerMatrixGenerator/references/SV/example_input/560-Breast/PD9756a.560_breast.rearrangements.n560.bedpe.tsv'
2024-04-28T23:31:53,689   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA130927.bedpe.tsv'
2024-04-28T23:31:53,691   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA270468.bedpe.tsv'
2024-04-28T23:31:53,693   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA321048.bedpe.tsv'
2024-04-28T23:31:53,694   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA410978.bedpe.tsv'
2024-04-28T23:31:53,695   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413642.bedpe.tsv'
2024-04-28T23:31:53,696   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413758.bedpe.tsv'
2024-04-28T23:31:53,697   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA413928.bedpe.tsv'
2024-04-28T23:31:53,699   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499742.bedpe.tsv'
2024-04-28T23:31:53,700   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA499746.bedpe.tsv'
2024-04-28T23:31:53,701   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501385.bedpe.tsv'
2024-04-28T23:31:53,702   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501469.bedpe.tsv'
2024-04-28T23:31:53,705   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501576.bedpe.tsv'
2024-04-28T23:31:53,708   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501599.bedpe.tsv'
2024-04-28T23:31:53,709   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA501607.bedpe.tsv'
2024-04-28T23:31:53,712   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505478.bedpe.tsv'
2024-04-28T23:31:53,715   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505529.bedpe.tsv'
2024-04-28T23:31:53,717   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505768.bedpe.tsv'
2024-04-28T23:31:53,719   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA505918.bedpe.tsv'
2024-04-28T23:31:53,720   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA507250.bedpe.tsv'
2024-04-28T23:31:53,723   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515261.bedpe.tsv'
2024-04-28T23:31:53,725   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA515347.bedpe.tsv'
2024-04-28T23:31:53,726   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517281.bedpe.tsv'
2024-04-28T23:31:53,728   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA517376.bedpe.tsv'
2024-04-28T23:31:53,729   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA520203.bedpe.tsv'
2024-04-28T23:31:53,732   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528809.bedpe.tsv'
2024-04-28T23:31:53,734   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528848.bedpe.tsv'
2024-04-28T23:31:53,739   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528876.bedpe.tsv'
2024-04-28T23:31:53,742   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA528947.bedpe.tsv'
2024-04-28T23:31:53,743   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529739.bedpe.tsv'
2024-04-28T23:31:53,745   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529747.bedpe.tsv'
2024-04-28T23:31:53,746   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529774.bedpe.tsv'
2024-04-28T23:31:53,748   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA529837.bedpe.tsv'
2024-04-28T23:31:53,749   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530440.bedpe.tsv'
2024-04-28T23:31:53,751   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530512.bedpe.tsv'
2024-04-28T23:31:53,753   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530594.bedpe.tsv'
2024-04-28T23:31:53,755   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA530642.bedpe.tsv'
2024-04-28T23:31:53,756   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA533704.bedpe.tsv'
2024-04-28T23:31:53,765   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538871.bedpe.tsv'
2024-04-28T23:31:53,767   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA538992.bedpe.tsv'
2024-04-28T23:31:53,768   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA539008.bedpe.tsv'
2024-04-28T23:31:53,769   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541765.bedpe.tsv'
2024-04-28T23:31:53,771   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA541894.bedpe.tsv'
2024-04-28T23:31:53,773   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542155.bedpe.tsv'
2024-04-28T23:31:53,774   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542181.bedpe.tsv'
2024-04-28T23:31:53,775   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542577.bedpe.tsv'
2024-04-28T23:31:53,776   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542830.bedpe.tsv'
2024-04-28T23:31:53,777   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA542879.bedpe.tsv'
2024-04-28T23:31:53,780   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA569081.bedpe.tsv'
2024-04-28T23:31:53,782   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570843.bedpe.tsv'
2024-04-28T23:31:53,783   adding 'SigProfilerMatrixGenerator/references/SV/example_input/PCAWG/SA570896.bedpe.tsv'
2024-04-28T23:31:53,887   adding 'SigProfilerMatrixGenerator/references/SV/example_output/560-Breast.SV32.annotated.tsv'
2024-04-28T23:31:53,893   adding 'SigProfilerMatrixGenerator/references/SV/example_output/560-Breast.SV32.matrix.tsv'
2024-04-28T23:31:53,895   adding 'SigProfilerMatrixGenerator/references/SV/example_output/560-Breast_RS32_counts_aggregated.pdf'
2024-04-28T23:31:53,926   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536.csv'
2024-04-28T23:31:53,949   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_1536_exome.csv'
2024-04-28T23:31:53,951   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24.csv'
2024-04-28T23:31:53,952   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_24_exome.csv'
2024-04-28T23:31:53,958   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384.csv'
2024-04-28T23:31:53,963   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_384_exome.csv'
2024-04-28T23:31:53,965   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6.csv'
2024-04-28T23:31:54,101   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144.csv'
2024-04-28T23:31:54,205   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6144_exome.csv'
2024-04-28T23:31:54,208   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_6_exome.csv'
2024-04-28T23:31:54,209   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96.csv'
2024-04-28T23:31:54,211   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_96_exome.csv'
2024-04-28T23:31:54,212   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS.csv'
2024-04-28T23:31:54,213   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186.csv'
2024-04-28T23:31:54,215   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS186_exome.csv'
2024-04-28T23:31:54,216   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh37_DBS_exome.csv'
2024-04-28T23:31:54,241   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536.csv'
2024-04-28T23:31:54,264   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_1536_exome.csv'
2024-04-28T23:31:54,266   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24.csv'
2024-04-28T23:31:54,267   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_24_exome.csv'
2024-04-28T23:31:54,271   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384.csv'
2024-04-28T23:31:54,275   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_384_exome.csv'
2024-04-28T23:31:54,276   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6.csv'
2024-04-28T23:31:54,383   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144.csv'
2024-04-28T23:31:54,487   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6144_exome.csv'
2024-04-28T23:31:54,489   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_6_exome.csv'
2024-04-28T23:31:54,491   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96.csv'
2024-04-28T23:31:54,493   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_96_exome.csv'
2024-04-28T23:31:54,494   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS.csv'
2024-04-28T23:31:54,495   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186.csv'
2024-04-28T23:31:54,497   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS186_exome.csv'
2024-04-28T23:31:54,498   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_GRCh38_DBS_exome.csv'
2024-04-28T23:31:54,522   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536.csv'
2024-04-28T23:31:54,540   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_1536_exome.csv'
2024-04-28T23:31:54,541   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24.csv'
2024-04-28T23:31:54,543   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_24_exome.csv'
2024-04-28T23:31:54,546   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384.csv'
2024-04-28T23:31:54,550   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_384_exome.csv'
2024-04-28T23:31:54,551   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6.csv'
2024-04-28T23:31:54,641   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144.csv'
2024-04-28T23:31:54,729   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6144_exome.csv'
2024-04-28T23:31:54,732   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_6_exome.csv'
2024-04-28T23:31:54,733   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96.csv'
2024-04-28T23:31:54,735   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_96_exome.csv'
2024-04-28T23:31:54,737   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS.csv'
2024-04-28T23:31:54,738   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186.csv'
2024-04-28T23:31:54,739   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS186_exome.csv'
2024-04-28T23:31:54,741   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm10_DBS_exome.csv'
2024-04-28T23:31:54,764   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536.csv'
2024-04-28T23:31:54,783   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_1536_exome.csv'
2024-04-28T23:31:54,785   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24.csv'
2024-04-28T23:31:54,786   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_24_exome.csv'
2024-04-28T23:31:54,790   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384.csv'
2024-04-28T23:31:54,793   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_384_exome.csv'
2024-04-28T23:31:54,795   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6.csv'
2024-04-28T23:31:54,885   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144.csv'
2024-04-28T23:31:54,973   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6144_exome.csv'
2024-04-28T23:31:54,976   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_6_exome.csv'
2024-04-28T23:31:54,978   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96.csv'
2024-04-28T23:31:54,979   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_96_exome.csv'
2024-04-28T23:31:54,981   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS.csv'
2024-04-28T23:31:54,982   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186.csv'
2024-04-28T23:31:54,984   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS186_exome.csv'
2024-04-28T23:31:54,985   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_mm9_DBS_exome.csv'
2024-04-28T23:31:55,008   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536.csv'
2024-04-28T23:31:55,029   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_1536_exome.csv'
2024-04-28T23:31:55,030   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24.csv'
2024-04-28T23:31:55,032   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_24_exome.csv'
2024-04-28T23:31:55,035   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384.csv'
2024-04-28T23:31:55,039   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_384_exome.csv'
2024-04-28T23:31:55,040   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6.csv'
2024-04-28T23:31:55,136   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144.csv'
2024-04-28T23:31:55,229   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6144_exome.csv'
2024-04-28T23:31:55,232   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_6_exome.csv'
2024-04-28T23:31:55,233   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96.csv'
2024-04-28T23:31:55,235   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_rn6_96_exome.csv'
2024-04-28T23:31:55,247   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_1536.csv'
2024-04-28T23:31:55,249   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_192.csv'
2024-04-28T23:31:55,251   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_24.csv'
2024-04-28T23:31:55,253   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_384.csv'
2024-04-28T23:31:55,254   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6.csv'
2024-04-28T23:31:55,318   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_6144.csv'
2024-04-28T23:31:55,320   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_96.csv'
2024-04-28T23:31:55,322   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS.csv'
2024-04-28T23:31:55,323   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_counts_yeast_DBS186.csv'
2024-04-28T23:31:55,359   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female.csv'
2024-04-28T23:31:55,397   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_female_exome.csv'
2024-04-28T23:31:55,463   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male.csv'
2024-04-28T23:31:55,530   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_1536_male_exome.csv'
2024-04-28T23:31:55,534   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female.csv'
2024-04-28T23:31:55,536   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_female_exome.csv'
2024-04-28T23:31:55,537   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male.csv'
2024-04-28T23:31:55,539   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_24_male_exome.csv'
2024-04-28T23:31:55,547   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female.csv'
2024-04-28T23:31:55,556   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_female_exome.csv'
2024-04-28T23:31:55,571   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male.csv'
2024-04-28T23:31:55,587   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_384_male_exome.csv'
2024-04-28T23:31:55,734   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female.csv'
2024-04-28T23:31:55,880   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_female_exome.csv'
2024-04-28T23:31:56,152   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male.csv'
2024-04-28T23:31:56,405   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6144_male_exome.csv'
2024-04-28T23:31:56,413   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female.csv'
2024-04-28T23:31:56,414   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_female_exome.csv'
2024-04-28T23:31:56,415   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male.csv'
2024-04-28T23:31:56,417   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_6_male_exome.csv'
2024-04-28T23:31:56,419   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female.csv'
2024-04-28T23:31:56,422   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_female_exome.csv'
2024-04-28T23:31:56,425   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male.csv'
2024-04-28T23:31:56,428   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_96_male_exome.csv'
2024-04-28T23:31:56,430   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female.csv'
2024-04-28T23:31:56,433   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_BED.csv'
2024-04-28T23:31:56,435   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_female_exome.csv'
2024-04-28T23:31:56,438   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male.csv'
2024-04-28T23:31:56,441   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS186_male_exome.csv'
2024-04-28T23:31:56,442   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female.csv'
2024-04-28T23:31:56,444   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_female_exome.csv'
2024-04-28T23:31:56,445   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male.csv'
2024-04-28T23:31:56,447   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh37_DBS_male_exome.csv'
2024-04-28T23:31:56,483   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female.csv'
2024-04-28T23:31:56,552   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_female_exome.csv'
2024-04-28T23:31:56,619   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male.csv'
2024-04-28T23:31:56,685   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_1536_male_exome.csv'
2024-04-28T23:31:56,689   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female.csv'
2024-04-28T23:31:56,690   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_female_exome.csv'
2024-04-28T23:31:56,692   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male.csv'
2024-04-28T23:31:56,693   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_24_male_exome.csv'
2024-04-28T23:31:56,701   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female.csv'
2024-04-28T23:31:56,716   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_female_exome.csv'
2024-04-28T23:31:56,731   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male.csv'
2024-04-28T23:31:56,740   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_384_male_exome.csv'
2024-04-28T23:31:56,888   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female.csv'
2024-04-28T23:31:57,035   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_female_exome.csv'
2024-04-28T23:31:57,303   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male.csv'
2024-04-28T23:31:57,559   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6144_male_exome.csv'
2024-04-28T23:31:57,567   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female.csv'
2024-04-28T23:31:57,568   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_female_exome.csv'
2024-04-28T23:31:57,569   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male.csv'
2024-04-28T23:31:57,571   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_6_male_exome.csv'
2024-04-28T23:31:57,573   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female.csv'
2024-04-28T23:31:57,576   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_female_exome.csv'
2024-04-28T23:31:57,579   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male.csv'
2024-04-28T23:31:57,582   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_96_male_exome.csv'
2024-04-28T23:31:57,585   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female.csv'
2024-04-28T23:31:57,587   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_female_exome.csv'
2024-04-28T23:31:57,590   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male.csv'
2024-04-28T23:31:57,592   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS186_male_exome.csv'
2024-04-28T23:31:57,594   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_exome_old.csv'
2024-04-28T23:31:57,595   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female.csv'
2024-04-28T23:31:57,597   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_female_exome.csv'
2024-04-28T23:31:57,599   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_GRCh38_DBS_male.csv'
2024-04-28T23:31:57,629   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female.csv'
2024-04-28T23:31:57,660   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_female_exome.csv'
2024-04-28T23:31:57,717   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male.csv'
2024-04-28T23:31:57,777   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_1536_male_exome.csv'
2024-04-28T23:31:57,783   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female.csv'
2024-04-28T23:31:57,786   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_female_exome.csv'
2024-04-28T23:31:57,789   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male.csv'
2024-04-28T23:31:57,791   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_24_male_exome.csv'
2024-04-28T23:31:57,797   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female.csv'
2024-04-28T23:31:57,805   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_female_exome.csv'
2024-04-28T23:31:57,819   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male.csv'
2024-04-28T23:31:57,827   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_384_male_exome.csv'
2024-04-28T23:31:57,958   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female.csv'
2024-04-28T23:31:58,087   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_female_exome.csv'
2024-04-28T23:31:58,324   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male.csv'
2024-04-28T23:31:58,545   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6144_male_exome.csv'
2024-04-28T23:31:58,553   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female.csv'
2024-04-28T23:31:58,554   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_female_exome.csv'
2024-04-28T23:31:58,555   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_6_male_exome.csv'
2024-04-28T23:31:58,557   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female.csv'
2024-04-28T23:31:58,559   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_female_exome.csv'
2024-04-28T23:31:58,562   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male.csv'
2024-04-28T23:31:58,565   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_96_male_exome.csv'
2024-04-28T23:31:58,567   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female.csv'
2024-04-28T23:31:58,570   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_female_exome.csv'
2024-04-28T23:31:58,572   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male.csv'
2024-04-28T23:31:58,574   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS186_male_exome.csv'
2024-04-28T23:31:58,576   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female.csv'
2024-04-28T23:31:58,577   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_female_exome.csv'
2024-04-28T23:31:58,579   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male.csv'
2024-04-28T23:31:58,580   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm10_DBS_male_exome.csv'
2024-04-28T23:31:58,610   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female.csv'
2024-04-28T23:31:58,641   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_female_exome.csv'
2024-04-28T23:31:58,698   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male.csv'
2024-04-28T23:31:58,755   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_1536_male_exome.csv'
2024-04-28T23:31:58,758   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female.csv'
2024-04-28T23:31:58,759   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_female_exome.csv'
2024-04-28T23:31:58,761   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male.csv'
2024-04-28T23:31:58,762   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_24_male_exome.csv'
2024-04-28T23:31:58,769   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female.csv'
2024-04-28T23:31:58,776   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_female_exome.csv'
2024-04-28T23:31:58,788   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male.csv'
2024-04-28T23:31:58,795   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_384_male_exome.csv'
2024-04-28T23:31:58,922   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female.csv'
2024-04-28T23:31:59,049   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_female_exome.csv'
2024-04-28T23:31:59,281   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male.csv'
2024-04-28T23:31:59,724   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6144_male_exome.csv'
2024-04-28T23:31:59,730   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female.csv'
2024-04-28T23:31:59,732   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_female_exome.csv'
2024-04-28T23:31:59,733   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male.csv'
2024-04-28T23:31:59,734   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_6_male_exome.csv'
2024-04-28T23:31:59,736   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female.csv'
2024-04-28T23:31:59,739   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_female_exome.csv'
2024-04-28T23:31:59,741   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male.csv'
2024-04-28T23:31:59,746   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_96_male_exome.csv'
2024-04-28T23:31:59,748   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female.csv'
2024-04-28T23:31:59,751   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_female_exome.csv'
2024-04-28T23:31:59,753   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male.csv'
2024-04-28T23:31:59,755   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS186_male_exome.csv'
2024-04-28T23:31:59,756   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female.csv'
2024-04-28T23:31:59,758   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_female_exome.csv'
2024-04-28T23:31:59,759   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male.csv'
2024-04-28T23:31:59,761   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_mm9_DBS_male_exome.csv'
2024-04-28T23:31:59,792   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female.csv'
2024-04-28T23:31:59,825   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_female_exome.csv'
2024-04-28T23:31:59,859   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male.csv'
2024-04-28T23:31:59,893   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_1536_male_exome.csv'
2024-04-28T23:31:59,896   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female.csv'
2024-04-28T23:31:59,897   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_female_exome.csv'
2024-04-28T23:31:59,898   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male.csv'
2024-04-28T23:31:59,900   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_24_male_exome.csv'
2024-04-28T23:31:59,907   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female.csv'
2024-04-28T23:31:59,914   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_female_exome.csv'
2024-04-28T23:31:59,922   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male.csv'
2024-04-28T23:31:59,930   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_384_male_exome.csv'
2024-04-28T23:32:00,060   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female.csv'
2024-04-28T23:32:00,198   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_female_exome.csv'
2024-04-28T23:32:00,342   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male.csv'
2024-04-28T23:32:00,488   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6144_male_exome.csv'
2024-04-28T23:32:00,493   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female.csv'
2024-04-28T23:32:00,494   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_female_exome.csv'
2024-04-28T23:32:00,495   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male.csv'
2024-04-28T23:32:00,497   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_6_male_exome.csv'
2024-04-28T23:32:00,499   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female.csv'
2024-04-28T23:32:00,502   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_female_exome.csv'
2024-04-28T23:32:00,504   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male.csv'
2024-04-28T23:32:00,506   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_rn6_96_male_exome.csv'
2024-04-28T23:32:00,514   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_signatures_96.txt'
2024-04-28T23:32:00,559   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_1536_female.csv'
2024-04-28T23:32:00,567   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_192_female.csv'
2024-04-28T23:32:00,569   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_24_female.csv'
2024-04-28T23:32:00,579   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_384_female.csv'
2024-04-28T23:32:00,748   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6144_female.csv'
2024-04-28T23:32:00,754   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_6_female.csv'
2024-04-28T23:32:00,756   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_96_female.csv'
2024-04-28T23:32:00,758   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS186_female.csv'
2024-04-28T23:32:00,760   adding 'SigProfilerMatrixGenerator/references/chromosomes/context_distributions/context_distribution_yeast_DBS_female.csv'
2024-04-28T23:32:00,762   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/__init__.py'
2024-04-28T23:32:03,532   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh37/GRCh37_exome.interval_list'
2024-04-28T23:32:04,603   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/GRCh38/GRCh38_exome.interval_list'
2024-04-28T23:32:05,902   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/c_elegans/c_elegans_exome.interval_list'
2024-04-28T23:32:06,805   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/dog/dog_exome.interval_list'
2024-04-28T23:32:06,834   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/ebv_exome.interval_list'
2024-04-28T23:32:06,836   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/multipleVariableTesting_mar12_2020.txt'
2024-04-28T23:32:06,839   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/ebv/tcga_cyclic_regions(AutoRecovered).csv'
2024-04-28T23:32:07,721   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/mm10/mm10_exome.interval_list'
2024-04-28T23:32:08,633   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/mm39/mm39_exome.interval_list'
2024-04-28T23:32:09,544   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/mm9/mm9_exome.interval_list'
2024-04-28T23:32:11,894   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/rn6/rn6_exome.interval_list'
2024-04-28T23:32:12,092   adding 'SigProfilerMatrixGenerator/references/chromosomes/exome/yeast/yeast_exome.interval_list'
2024-04-28T23:32:12,095   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/__init__.py'
2024-04-28T23:32:12,117   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/10_transcripts.txt'
2024-04-28T23:32:12,160   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/11_transcripts.txt'
2024-04-28T23:32:12,203   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/12_transcripts.txt'
2024-04-28T23:32:12,214   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/13_transcripts.txt'
2024-04-28T23:32:12,238   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/14_transcripts.txt'
2024-04-28T23:32:12,260   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/15_transcripts.txt'
2024-04-28T23:32:12,291   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/16_transcripts.txt'
2024-04-28T23:32:12,334   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/17_transcripts.txt'
2024-04-28T23:32:12,348   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/18_transcripts.txt'
2024-04-28T23:32:12,398   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/19_transcripts.txt'
2024-04-28T23:32:12,461   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/1_transcripts.txt'
2024-04-28T23:32:12,479   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/20_transcripts.txt'
2024-04-28T23:32:12,486   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/21_transcripts.txt'
2024-04-28T23:32:12,501   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/22_transcripts.txt'
2024-04-28T23:32:12,546   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/2_transcripts.txt'
2024-04-28T23:32:12,587   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/3_transcripts.txt'
2024-04-28T23:32:12,614   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/4_transcripts.txt'
2024-04-28T23:32:12,643   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/5_transcripts.txt'
2024-04-28T23:32:12,674   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/6_transcripts.txt'
2024-04-28T23:32:12,704   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/7_transcripts.txt'
2024-04-28T23:32:12,730   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/8_transcripts.txt'
2024-04-28T23:32:12,753   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/9_transcripts.txt'
2024-04-28T23:32:12,755   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/MT_transcripts.txt'
2024-04-28T23:32:12,778   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/X_transcripts.txt'
2024-04-28T23:32:12,781   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh37/Y_transcripts.txt'
2024-04-28T23:32:12,803   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/10_transcripts.txt'
2024-04-28T23:32:12,848   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/11_transcripts.txt'
2024-04-28T23:32:12,890   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/12_transcripts.txt'
2024-04-28T23:32:12,901   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/13_transcripts.txt'
2024-04-28T23:32:12,925   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/14_transcripts.txt'
2024-04-28T23:32:12,947   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/15_transcripts.txt'
2024-04-28T23:32:12,979   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/16_transcripts.txt'
2024-04-28T23:32:13,022   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/17_transcripts.txt'
2024-04-28T23:32:13,036   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/18_transcripts.txt'
2024-04-28T23:32:13,087   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/19_transcripts.txt'
2024-04-28T23:32:13,150   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/1_transcripts.txt'
2024-04-28T23:32:13,168   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/20_transcripts.txt'
2024-04-28T23:32:13,175   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/21_transcripts.txt'
2024-04-28T23:32:13,190   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/22_transcripts.txt'
2024-04-28T23:32:13,235   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/2_transcripts.txt'
2024-04-28T23:32:13,278   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/3_transcripts.txt'
2024-04-28T23:32:13,306   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/4_transcripts.txt'
2024-04-28T23:32:13,337   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/5_transcripts.txt'
2024-04-28T23:32:13,369   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/6_transcripts.txt'
2024-04-28T23:32:13,401   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/7_transcripts.txt'
2024-04-28T23:32:13,428   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/8_transcripts.txt'
2024-04-28T23:32:13,451   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/9_transcripts.txt'
2024-04-28T23:32:13,453   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/MT_transcripts.txt'
2024-04-28T23:32:13,477   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/X_transcripts.txt'
2024-04-28T23:32:13,480   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/GRCh38/Y_transcripts.txt'
2024-04-28T23:32:13,513   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/III_transcripts.txt'
2024-04-28T23:32:13,557   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/II_transcripts.txt'
2024-04-28T23:32:13,604   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/IV_transcripts.txt'
2024-04-28T23:32:13,643   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/I_transcripts.txt'
2024-04-28T23:32:13,646   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/MtDNA_transcripts.txt'
2024-04-28T23:32:13,705   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/V_transcripts.txt'
2024-04-28T23:32:13,742   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/c_elegans/X_transcripts.txt'
2024-04-28T23:32:13,752   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/10_transcripts.txt'
2024-04-28T23:32:13,758   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/11_transcripts.txt'
2024-04-28T23:32:13,764   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/12_transcripts.txt'
2024-04-28T23:32:13,769   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/13_transcripts.txt'
2024-04-28T23:32:13,773   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/14_transcripts.txt'
2024-04-28T23:32:13,778   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/15_transcripts.txt'
2024-04-28T23:32:13,783   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/16_transcripts.txt'
2024-04-28T23:32:13,790   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/17_transcripts.txt'
2024-04-28T23:32:13,798   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/18_transcripts.txt'
2024-04-28T23:32:13,800   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/19_transcripts.txt'
2024-04-28T23:32:13,815   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/1_transcripts.txt'
2024-04-28T23:32:13,825   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/20_transcripts.txt'
2024-04-28T23:32:13,830   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/21_transcripts.txt'
2024-04-28T23:32:13,833   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/22_transcripts.txt'
2024-04-28T23:32:13,837   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/23_transcripts.txt'
2024-04-28T23:32:13,842   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/24_transcripts.txt'
2024-04-28T23:32:13,847   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/25_transcripts.txt'
2024-04-28T23:32:13,852   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/26_transcripts.txt'
2024-04-28T23:32:13,858   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/27_transcripts.txt'
2024-04-28T23:32:13,862   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/28_transcripts.txt'
2024-04-28T23:32:13,865   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/29_transcripts.txt'
2024-04-28T23:32:13,873   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/2_transcripts.txt'
2024-04-28T23:32:13,878   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/30_transcripts.txt'
2024-04-28T23:32:13,881   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/31_transcripts.txt'
2024-04-28T23:32:13,883   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/32_transcripts.txt'
2024-04-28T23:32:13,886   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/33_transcripts.txt'
2024-04-28T23:32:13,889   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/34_transcripts.txt'
2024-04-28T23:32:13,891   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/35_transcripts.txt'
2024-04-28T23:32:13,894   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/36_transcripts.txt'
2024-04-28T23:32:13,897   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/37_transcripts.txt'
2024-04-28T23:32:13,899   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/38_transcripts.txt'
2024-04-28T23:32:13,904   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/3_transcripts.txt'
2024-04-28T23:32:13,910   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/4_transcripts.txt'
2024-04-28T23:32:13,922   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/5_transcripts.txt'
2024-04-28T23:32:13,931   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/6_transcripts.txt'
2024-04-28T23:32:13,939   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/7_transcripts.txt'
2024-04-28T23:32:13,946   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/8_transcripts.txt'
2024-04-28T23:32:13,958   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/9_transcripts.txt'
2024-04-28T23:32:13,967   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/dog/X_transcripts.txt'
2024-04-28T23:32:13,970   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/ebv/gi_82503188_ref_NC_007605_transcripts.txt'
2024-04-28T23:32:13,993   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/10_transcripts.txt'
2024-04-28T23:32:14,029   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/11_transcripts.txt'
2024-04-28T23:32:14,045   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/12_transcripts.txt'
2024-04-28T23:32:14,063   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/13_transcripts.txt'
2024-04-28T23:32:14,083   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/14_transcripts.txt'
2024-04-28T23:32:14,101   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/15_transcripts.txt'
2024-04-28T23:32:14,117   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/16_transcripts.txt'
2024-04-28T23:32:14,140   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/17_transcripts.txt'
2024-04-28T23:32:14,151   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/18_transcripts.txt'
2024-04-28T23:32:14,165   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/19_transcripts.txt'
2024-04-28T23:32:14,193   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/1_transcripts.txt'
2024-04-28T23:32:14,236   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/2_transcripts.txt'
2024-04-28T23:32:14,262   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/3_transcripts.txt'
2024-04-28T23:32:14,292   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/4_transcripts.txt'
2024-04-28T23:32:14,324   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/5_transcripts.txt'
2024-04-28T23:32:14,351   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/6_transcripts.txt'
2024-04-28T23:32:14,400   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/7_transcripts.txt'
2024-04-28T23:32:14,424   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/8_transcripts.txt'
2024-04-28T23:32:14,454   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/9_transcripts.txt'
2024-04-28T23:32:14,457   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/MT_transcripts.txt'
2024-04-28T23:32:14,475   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/X_transcripts.txt'
2024-04-28T23:32:14,479   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm10/Y_transcripts.txt'
2024-04-28T23:32:14,503   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/10_transcripts.txt'
2024-04-28T23:32:14,538   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/11_transcripts.txt'
2024-04-28T23:32:14,555   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/12_transcripts.txt'
2024-04-28T23:32:14,573   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/13_transcripts.txt'
2024-04-28T23:32:14,592   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/14_transcripts.txt'
2024-04-28T23:32:14,611   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/15_transcripts.txt'
2024-04-28T23:32:14,627   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/16_transcripts.txt'
2024-04-28T23:32:14,652   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/17_transcripts.txt'
2024-04-28T23:32:14,665   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/18_transcripts.txt'
2024-04-28T23:32:14,681   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/19_transcripts.txt'
2024-04-28T23:32:14,710   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/1_transcripts.txt'
2024-04-28T23:32:14,753   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/2_transcripts.txt'
2024-04-28T23:32:14,779   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/3_transcripts.txt'
2024-04-28T23:32:14,809   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/4_transcripts.txt'
2024-04-28T23:32:14,841   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/5_transcripts.txt'
2024-04-28T23:32:14,869   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/6_transcripts.txt'
2024-04-28T23:32:14,918   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/7_transcripts.txt'
2024-04-28T23:32:14,943   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/8_transcripts.txt'
2024-04-28T23:32:14,972   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/9_transcripts.txt'
2024-04-28T23:32:14,992   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/X_transcripts.txt'
2024-04-28T23:32:14,996   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm39/Y_transcripts.txt'
2024-04-28T23:32:15,024   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/10_transcripts.txt'
2024-04-28T23:32:15,089   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/11_transcripts.txt'
2024-04-28T23:32:15,110   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/12_transcripts.txt'
2024-04-28T23:32:15,130   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/13_transcripts.txt'
2024-04-28T23:32:15,153   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/14_transcripts.txt'
2024-04-28T23:32:15,175   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/15_transcripts.txt'
2024-04-28T23:32:15,197   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/16_transcripts.txt'
2024-04-28T23:32:15,228   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/17_transcripts.txt'
2024-04-28T23:32:15,242   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/18_transcripts.txt'
2024-04-28T23:32:15,259   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/19_transcripts.txt'
2024-04-28T23:32:15,295   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/1_transcripts.txt'
2024-04-28T23:32:15,363   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/2_transcripts.txt'
2024-04-28T23:32:15,398   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/3_transcripts.txt'
2024-04-28T23:32:15,449   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/4_transcripts.txt'
2024-04-28T23:32:15,497   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/5_transcripts.txt'
2024-04-28T23:32:15,535   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/6_transcripts.txt'
2024-04-28T23:32:15,593   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/7_transcripts.txt'
2024-04-28T23:32:15,629   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/8_transcripts.txt'
2024-04-28T23:32:15,665   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/9_transcripts.txt'
2024-04-28T23:32:15,672   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/MT_transcripts.txt'
2024-04-28T23:32:15,702   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/X_transcripts.txt'
2024-04-28T23:32:15,706   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/mm9/Y_transcripts.txt'
2024-04-28T23:32:15,729   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/10_transcripts.txt'
2024-04-28T23:32:15,738   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/11_transcripts.txt'
2024-04-28T23:32:15,747   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/12_transcripts.txt'
2024-04-28T23:32:15,756   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/13_transcripts.txt'
2024-04-28T23:32:15,765   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/14_transcripts.txt'
2024-04-28T23:32:15,776   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/15_transcripts.txt'
2024-04-28T23:32:15,784   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/16_transcripts.txt'
2024-04-28T23:32:15,793   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/17_transcripts.txt'
2024-04-28T23:32:15,799   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/18_transcripts.txt'
2024-04-28T23:32:15,806   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/19_transcripts.txt'
2024-04-28T23:32:15,842   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/1_transcripts.txt'
2024-04-28T23:32:15,852   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/20_transcripts.txt'
2024-04-28T23:32:15,870   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/2_transcripts.txt'
2024-04-28T23:32:15,893   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/3_transcripts.txt'
2024-04-28T23:32:15,911   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/4_transcripts.txt'
2024-04-28T23:32:15,928   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/5_transcripts.txt'
2024-04-28T23:32:15,940   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/6_transcripts.txt'
2024-04-28T23:32:15,957   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/7_transcripts.txt'
2024-04-28T23:32:15,973   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/8_transcripts.txt'
2024-04-28T23:32:15,984   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/9_transcripts.txt'
2024-04-28T23:32:15,985   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/MT_transcripts.txt'
2024-04-28T23:32:15,995   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/X_transcripts.txt'
2024-04-28T23:32:15,997   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn6/Y_transcripts.txt'
2024-04-28T23:32:16,030   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/10_transcripts.txt'
2024-04-28T23:32:16,045   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/11_transcripts.txt'
2024-04-28T23:32:16,059   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/12_transcripts.txt'
2024-04-28T23:32:16,074   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/13_transcripts.txt'
2024-04-28T23:32:16,090   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/14_transcripts.txt'
2024-04-28T23:32:16,105   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/15_transcripts.txt'
2024-04-28T23:32:16,119   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/16_transcripts.txt'
2024-04-28T23:32:16,133   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/17_transcripts.txt'
2024-04-28T23:32:16,145   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/18_transcripts.txt'
2024-04-28T23:32:16,157   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/19_transcripts.txt'
2024-04-28T23:32:16,218   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/1_transcripts.txt'
2024-04-28T23:32:16,234   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/20_transcripts.txt'
2024-04-28T23:32:16,267   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/2_transcripts.txt'
2024-04-28T23:32:16,304   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/3_transcripts.txt'
2024-04-28T23:32:16,336   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/4_transcripts.txt'
2024-04-28T23:32:16,366   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/5_transcripts.txt'
2024-04-28T23:32:16,389   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/6_transcripts.txt'
2024-04-28T23:32:16,419   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/7_transcripts.txt'
2024-04-28T23:32:16,445   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/8_transcripts.txt'
2024-04-28T23:32:16,465   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/9_transcripts.txt'
2024-04-28T23:32:16,468   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/MT_transcripts.txt'
2024-04-28T23:32:16,487   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/X_transcripts.txt'
2024-04-28T23:32:16,490   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/rn7/Y_transcripts.txt'
2024-04-28T23:32:16,492   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/III_transcripts.txt'
2024-04-28T23:32:16,496   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/II_transcripts.txt'
2024-04-28T23:32:16,502   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IV_transcripts.txt'
2024-04-28T23:32:16,505   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/IX_transcripts.txt'
2024-04-28T23:32:16,506   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/I_transcripts.txt'
2024-04-28T23:32:16,508   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/M_transcripts.txt'
2024-04-28T23:32:16,510   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VIII_transcripts.txt'
2024-04-28T23:32:16,515   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VII_transcripts.txt'
2024-04-28T23:32:16,517   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/VI_transcripts.txt'
2024-04-28T23:32:16,520   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/V_transcripts.txt'
2024-04-28T23:32:16,524   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIII_transcripts.txt'
2024-04-28T23:32:16,529   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XII_transcripts.txt'
2024-04-28T23:32:16,532   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XIV_transcripts.txt'
2024-04-28T23:32:16,535   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XI_transcripts.txt'
2024-04-28T23:32:16,539   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XVI_transcripts.txt'
2024-04-28T23:32:16,544   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/XV_transcripts.txt'
2024-04-28T23:32:16,548   adding 'SigProfilerMatrixGenerator/references/chromosomes/transcripts/yeast/X_transcripts.txt'
2024-04-28T23:32:16,550   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/__init__.py'
2024-04-28T23:32:16,557   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/10_BED_TSB.txt'
2024-04-28T23:32:16,568   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/11_BED_TSB.txt'
2024-04-28T23:32:16,578   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/12_BED_TSB.txt'
2024-04-28T23:32:16,580   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/13_BED_TSB.txt'
2024-04-28T23:32:16,585   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/14_BED_TSB.txt'
2024-04-28T23:32:16,590   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/15_BED_TSB.txt'
2024-04-28T23:32:16,597   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/16_BED_TSB.txt'
2024-04-28T23:32:16,607   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/17_BED_TSB.txt'
2024-04-28T23:32:16,610   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/18_BED_TSB.txt'
2024-04-28T23:32:16,622   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/19_BED_TSB.txt'
2024-04-28T23:32:16,643   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/1_BED_TSB.txt'
2024-04-28T23:32:16,648   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/20_BED_TSB.txt'
2024-04-28T23:32:16,650   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/21_BED_TSB.txt'
2024-04-28T23:32:16,654   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/22_BED_TSB.txt'
2024-04-28T23:32:16,667   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/2_BED_TSB.txt'
2024-04-28T23:32:16,677   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/3_BED_TSB.txt'
2024-04-28T23:32:16,684   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/4_BED_TSB.txt'
2024-04-28T23:32:16,693   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/5_BED_TSB.txt'
2024-04-28T23:32:16,702   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/6_BED_TSB.txt'
2024-04-28T23:32:16,711   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/7_BED_TSB.txt'
2024-04-28T23:32:16,717   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/8_BED_TSB.txt'
2024-04-28T23:32:16,724   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/9_BED_TSB.txt'
2024-04-28T23:32:16,732   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/X_BED_TSB.txt'
2024-04-28T23:32:16,733   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh37/Y_BED_TSB.txt'
2024-04-28T23:32:16,741   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/10_BED_TSB.txt'
2024-04-28T23:32:16,751   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/11_BED_TSB.txt'
2024-04-28T23:32:16,760   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/12_BED_TSB.txt'
2024-04-28T23:32:16,763   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/13_BED_TSB.txt'
2024-04-28T23:32:16,768   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/14_BED_TSB.txt'
2024-04-28T23:32:16,772   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/15_BED_TSB.txt'
2024-04-28T23:32:16,779   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/16_BED_TSB.txt'
2024-04-28T23:32:16,788   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/17_BED_TSB.txt'
2024-04-28T23:32:16,791   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/18_BED_TSB.txt'
2024-04-28T23:32:16,802   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/19_BED_TSB.txt'
2024-04-28T23:32:16,823   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/1_BED_TSB.txt'
2024-04-28T23:32:16,828   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/20_BED_TSB.txt'
2024-04-28T23:32:16,830   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/21_BED_TSB.txt'
2024-04-28T23:32:16,833   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/22_BED_TSB.txt'
2024-04-28T23:32:16,845   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/2_BED_TSB.txt'
2024-04-28T23:32:16,856   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/3_BED_TSB.txt'
2024-04-28T23:32:16,862   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/4_BED_TSB.txt'
2024-04-28T23:32:16,870   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/5_BED_TSB.txt'
2024-04-28T23:32:16,880   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/6_BED_TSB.txt'
2024-04-28T23:32:16,889   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/7_BED_TSB.txt'
2024-04-28T23:32:16,895   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/8_BED_TSB.txt'
2024-04-28T23:32:16,902   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/9_BED_TSB.txt'
2024-04-28T23:32:16,911   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/X_BED_TSB.txt'
2024-04-28T23:32:16,912   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/GRCh38/Y_BED_TSB.txt'
2024-04-28T23:32:16,935   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/III_BED_TSB.txt'
2024-04-28T23:32:16,968   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/II_BED_TSB.txt'
2024-04-28T23:32:16,999   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/IV_BED_TSB.txt'
2024-04-28T23:32:17,027   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/I_BED_TSB.txt'
2024-04-28T23:32:17,029   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/MtDNA_BED_TSB.txt'
2024-04-28T23:32:17,078   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/V_BED_TSB.txt'
2024-04-28T23:32:17,105   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/c_elegans/X_BED_TSB.txt'
2024-04-28T23:32:17,112   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/10_BED_TSB.txt'
2024-04-28T23:32:17,116   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/11_BED_TSB.txt'
2024-04-28T23:32:17,120   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/12_BED_TSB.txt'
2024-04-28T23:32:17,124   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/13_BED_TSB.txt'
2024-04-28T23:32:17,127   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/14_BED_TSB.txt'
2024-04-28T23:32:17,130   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/15_BED_TSB.txt'
2024-04-28T23:32:17,134   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/16_BED_TSB.txt'
2024-04-28T23:32:17,138   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/17_BED_TSB.txt'
2024-04-28T23:32:17,144   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/18_BED_TSB.txt'
2024-04-28T23:32:17,146   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/19_BED_TSB.txt'
2024-04-28T23:32:17,158   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/1_BED_TSB.txt'
2024-04-28T23:32:17,166   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/20_BED_TSB.txt'
2024-04-28T23:32:17,170   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/21_BED_TSB.txt'
2024-04-28T23:32:17,172   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/22_BED_TSB.txt'
2024-04-28T23:32:17,175   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/23_BED_TSB.txt'
2024-04-28T23:32:17,179   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/24_BED_TSB.txt'
2024-04-28T23:32:17,182   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/25_BED_TSB.txt'
2024-04-28T23:32:17,187   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/26_BED_TSB.txt'
2024-04-28T23:32:17,191   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/27_BED_TSB.txt'
2024-04-28T23:32:17,194   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/28_BED_TSB.txt'
2024-04-28T23:32:17,196   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/29_BED_TSB.txt'
2024-04-28T23:32:17,203   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/2_BED_TSB.txt'
2024-04-28T23:32:17,206   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/30_BED_TSB.txt'
2024-04-28T23:32:17,208   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/31_BED_TSB.txt'
2024-04-28T23:32:17,211   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/32_BED_TSB.txt'
2024-04-28T23:32:17,213   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/33_BED_TSB.txt'
2024-04-28T23:32:17,215   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/34_BED_TSB.txt'
2024-04-28T23:32:17,218   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/35_BED_TSB.txt'
2024-04-28T23:32:17,220   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/36_BED_TSB.txt'
2024-04-28T23:32:17,222   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/37_BED_TSB.txt'
2024-04-28T23:32:17,224   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/38_BED_TSB.txt'
2024-04-28T23:32:17,228   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/3_BED_TSB.txt'
2024-04-28T23:32:17,232   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/4_BED_TSB.txt'
2024-04-28T23:32:17,240   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/5_BED_TSB.txt'
2024-04-28T23:32:17,248   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/6_BED_TSB.txt'
2024-04-28T23:32:17,253   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/7_BED_TSB.txt'
2024-04-28T23:32:17,257   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/8_BED_TSB.txt'
2024-04-28T23:32:17,267   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/9_BED_TSB.txt'
2024-04-28T23:32:17,274   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/dog/X_BED_TSB.txt'
2024-04-28T23:32:17,283   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/10_BED_TSB.txt'
2024-04-28T23:32:17,298   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/11_BED_TSB.txt'
2024-04-28T23:32:17,304   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/12_BED_TSB.txt'
2024-04-28T23:32:17,310   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/13_BED_TSB.txt'
2024-04-28T23:32:17,318   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/14_BED_TSB.txt'
2024-04-28T23:32:17,324   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/15_BED_TSB.txt'
2024-04-28T23:32:17,329   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/16_BED_TSB.txt'
2024-04-28T23:32:17,338   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/17_BED_TSB.txt'
2024-04-28T23:32:17,342   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/18_BED_TSB.txt'
2024-04-28T23:32:17,348   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/19_BED_TSB.txt'
2024-04-28T23:32:17,359   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/1_BED_TSB.txt'
2024-04-28T23:32:17,378   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/2_BED_TSB.txt'
2024-04-28T23:32:17,388   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/3_BED_TSB.txt'
2024-04-28T23:32:17,402   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/4_BED_TSB.txt'
2024-04-28T23:32:17,414   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/5_BED_TSB.txt'
2024-04-28T23:32:17,425   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/6_BED_TSB.txt'
2024-04-28T23:32:17,445   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/7_BED_TSB.txt'
2024-04-28T23:32:17,459   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/8_BED_TSB.txt'
2024-04-28T23:32:17,470   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/9_BED_TSB.txt'
2024-04-28T23:32:17,481   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/X_BED_TSB.txt'
2024-04-28T23:32:17,484   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm10/Y_BED_TSB.txt'
2024-04-28T23:32:17,495   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/10_BED_TSB.txt'
2024-04-28T23:32:17,510   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/11_BED_TSB.txt'
2024-04-28T23:32:17,519   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/12_BED_TSB.txt'
2024-04-28T23:32:17,527   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/13_BED_TSB.txt'
2024-04-28T23:32:17,537   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/14_BED_TSB.txt'
2024-04-28T23:32:17,546   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/15_BED_TSB.txt'
2024-04-28T23:32:17,553   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/16_BED_TSB.txt'
2024-04-28T23:32:17,565   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/17_BED_TSB.txt'
2024-04-28T23:32:17,572   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/18_BED_TSB.txt'
2024-04-28T23:32:17,580   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/19_BED_TSB.txt'
2024-04-28T23:32:17,594   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/1_BED_TSB.txt'
2024-04-28T23:32:17,616   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/2_BED_TSB.txt'
2024-04-28T23:32:17,627   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/3_BED_TSB.txt'
2024-04-28T23:32:17,644   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/4_BED_TSB.txt'
2024-04-28T23:32:17,659   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/5_BED_TSB.txt'
2024-04-28T23:32:17,672   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/6_BED_TSB.txt'
2024-04-28T23:32:17,695   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/7_BED_TSB.txt'
2024-04-28T23:32:17,707   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/8_BED_TSB.txt'
2024-04-28T23:32:17,720   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/9_BED_TSB.txt'
2024-04-28T23:32:17,730   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/X_BED_TSB.txt'
2024-04-28T23:32:17,733   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm39/Y_BED_TSB.txt'
2024-04-28T23:32:17,746   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/10_BED_TSB.txt'
2024-04-28T23:32:17,764   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/11_BED_TSB.txt'
2024-04-28T23:32:17,773   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/12_BED_TSB.txt'
2024-04-28T23:32:17,783   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/13_BED_TSB.txt'
2024-04-28T23:32:17,794   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/14_BED_TSB.txt'
2024-04-28T23:32:17,803   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/15_BED_TSB.txt'
2024-04-28T23:32:17,812   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/16_BED_TSB.txt'
2024-04-28T23:32:17,825   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/17_BED_TSB.txt'
2024-04-28T23:32:17,831   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/18_BED_TSB.txt'
2024-04-28T23:32:17,839   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/19_BED_TSB.txt'
2024-04-28T23:32:17,853   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/1_BED_TSB.txt'
2024-04-28T23:32:17,875   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/2_BED_TSB.txt'
2024-04-28T23:32:17,889   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/3_BED_TSB.txt'
2024-04-28T23:32:17,906   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/4_BED_TSB.txt'
2024-04-28T23:32:17,921   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/5_BED_TSB.txt'
2024-04-28T23:32:17,935   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/6_BED_TSB.txt'
2024-04-28T23:32:17,960   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/7_BED_TSB.txt'
2024-04-28T23:32:17,972   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/8_BED_TSB.txt'
2024-04-28T23:32:17,986   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/9_BED_TSB.txt'
2024-04-28T23:32:17,997   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/X_BED_TSB.txt'
2024-04-28T23:32:18,003   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/mm9/Y_BED_TSB.txt'
2024-04-28T23:32:18,028   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/10_BED_TSB.txt'
2024-04-28T23:32:18,036   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/11_BED_TSB.txt'
2024-04-28T23:32:18,044   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/12_BED_TSB.txt'
2024-04-28T23:32:18,052   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/13_BED_TSB.txt'
2024-04-28T23:32:18,059   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/14_BED_TSB.txt'
2024-04-28T23:32:18,065   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/15_BED_TSB.txt'
2024-04-28T23:32:18,070   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/16_BED_TSB.txt'
2024-04-28T23:32:18,075   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/17_BED_TSB.txt'
2024-04-28T23:32:18,078   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/18_BED_TSB.txt'
2024-04-28T23:32:18,083   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/19_BED_TSB.txt'
2024-04-28T23:32:18,115   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/1_BED_TSB.txt'
2024-04-28T23:32:18,120   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/20_BED_TSB.txt'
2024-04-28T23:32:18,134   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/2_BED_TSB.txt'
2024-04-28T23:32:18,153   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/3_BED_TSB.txt'
2024-04-28T23:32:18,168   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/4_BED_TSB.txt'
2024-04-28T23:32:18,181   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/5_BED_TSB.txt'
2024-04-28T23:32:18,190   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/6_BED_TSB.txt'
2024-04-28T23:32:18,203   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/7_BED_TSB.txt'
2024-04-28T23:32:18,215   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/8_BED_TSB.txt'
2024-04-28T23:32:18,223   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/9_BED_TSB.txt'
2024-04-28T23:32:18,224   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/MT_BED_TSB.txt'
2024-04-28T23:32:18,232   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/X_BED_TSB.txt'
2024-04-28T23:32:18,233   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn6/Y_BED_TSB.txt'
2024-04-28T23:32:18,252   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/10_BED_TSB.txt'
2024-04-28T23:32:18,258   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/11_BED_TSB.txt'
2024-04-28T23:32:18,266   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/12_BED_TSB.txt'
2024-04-28T23:32:18,273   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/13_BED_TSB.txt'
2024-04-28T23:32:18,281   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/14_BED_TSB.txt'
2024-04-28T23:32:18,289   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/15_BED_TSB.txt'
2024-04-28T23:32:18,295   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/16_BED_TSB.txt'
2024-04-28T23:32:18,302   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/17_BED_TSB.txt'
2024-04-28T23:32:18,307   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/18_BED_TSB.txt'
2024-04-28T23:32:18,313   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/19_BED_TSB.txt'
2024-04-28T23:32:18,355   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/1_BED_TSB.txt'
2024-04-28T23:32:18,362   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/20_BED_TSB.txt'
2024-04-28T23:32:18,383   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/2_BED_TSB.txt'
2024-04-28T23:32:18,406   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/3_BED_TSB.txt'
2024-04-28T23:32:18,426   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/4_BED_TSB.txt'
2024-04-28T23:32:18,445   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/5_BED_TSB.txt'
2024-04-28T23:32:18,458   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/6_BED_TSB.txt'
2024-04-28T23:32:18,475   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/7_BED_TSB.txt'
2024-04-28T23:32:18,490   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/8_BED_TSB.txt'
2024-04-28T23:32:18,500   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/9_BED_TSB.txt'
2024-04-28T23:32:18,501   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/MT_BED_TSB.txt'
2024-04-28T23:32:18,513   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/X_BED_TSB.txt'
2024-04-28T23:32:18,514   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/rn7/Y_BED_TSB.txt'
2024-04-28T23:32:18,517   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/III_BED_TSB.txt'
2024-04-28T23:32:18,520   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/II_BED_TSB.txt'
2024-04-28T23:32:18,526   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IV_BED_TSB.txt'
2024-04-28T23:32:18,528   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/IX_BED_TSB.txt'
2024-04-28T23:32:18,530   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/I_BED_TSB.txt'
2024-04-28T23:32:18,532   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VIII_BED_TSB.txt'
2024-04-28T23:32:18,536   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VII_BED_TSB.txt'
2024-04-28T23:32:18,538   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/VI_BED_TSB.txt'
2024-04-28T23:32:18,540   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/V_BED_TSB.txt'
2024-04-28T23:32:18,544   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIII_BED_TSB.txt'
2024-04-28T23:32:18,548   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XII_BED_TSB.txt'
2024-04-28T23:32:18,551   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XIV_BED_TSB.txt'
2024-04-28T23:32:18,553   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XI_BED_TSB.txt'
2024-04-28T23:32:18,556   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XVI_BED_TSB.txt'
2024-04-28T23:32:18,560   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/XV_BED_TSB.txt'
2024-04-28T23:32:18,563   adding 'SigProfilerMatrixGenerator/references/chromosomes/tsb_BED/yeast/X_BED_TSB.txt'
2024-04-28T23:32:18,566   adding 'SigProfilerMatrixGenerator/scripts/CNVMatrixGenerator.py'
2024-04-28T23:32:18,577   adding 'SigProfilerMatrixGenerator/scripts/MutationMatrixGenerator.py'
2024-04-28T23:32:18,583   adding 'SigProfilerMatrixGenerator/scripts/SVMatrixGenerator.py'
2024-04-28T23:32:18,588   adding 'SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGeneratorFunc.py'
2024-04-28T23:32:18,590   adding 'SigProfilerMatrixGenerator/scripts/SigProfilerMatrixGenerator_CLI.py'
2024-04-28T23:32:18,591   adding 'SigProfilerMatrixGenerator/scripts/__init__.py'
2024-04-28T23:32:18,594   adding 'SigProfilerMatrixGenerator/scripts/convert_input_to_simple_files.py'
2024-04-28T23:32:18,595   adding 'SigProfilerMatrixGenerator/scripts/ref_install.py'
2024-04-28T23:32:18,598   adding 'SigProfilerMatrixGenerator/scripts/reference_genome_manager.py'
2024-04-28T23:32:18,600   adding 'SigProfilerMatrixGenerator/scripts/save_chrom_strings.py'
2024-04-28T23:32:18,601   adding 'SigProfilerMatrixGenerator/scripts/save_chrom_tsb_separate.py'
2024-04-28T23:32:18,604   adding 'SigProfilerMatrixGenerator/scripts/save_context_distribution.py'
2024-04-28T23:32:18,606   adding 'SigProfilerMatrixGenerator/scripts/save_tsb_192.py'
2024-04-28T23:32:18,625   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_3072.txt'
2024-04-28T23:32:18,627   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/GRCh37_bench_orig_96.txt'
2024-04-28T23:32:18,646   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_3072.txt'
2024-04-28T23:32:18,648   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/GRCh38_bench_orig_96.txt'
2024-04-28T23:32:18,649   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/__init__.py'
2024-04-28T23:32:18,669   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_3072.txt'
2024-04-28T23:32:18,671   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/mm10_bench_orig_96.txt'
2024-04-28T23:32:18,690   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_3072.txt'
2024-04-28T23:32:18,692   adding 'SigProfilerMatrixGenerator/scripts/Benchmark/mm9_bench_orig_96.txt'
2024-04-28T23:32:18,694   adding 'SigProfilerMatrixGenerator-1.2.26.dist-info/LICENSE'
2024-04-28T23:32:18,696   adding 'SigProfilerMatrixGenerator-1.2.26.dist-info/METADATA'
2024-04-28T23:32:18,697   adding 'SigProfilerMatrixGenerator-1.2.26.dist-info/WHEEL'
2024-04-28T23:32:18,698   adding 'SigProfilerMatrixGenerator-1.2.26.dist-info/entry_points.txt'
2024-04-28T23:32:18,699   adding 'SigProfilerMatrixGenerator-1.2.26.dist-info/top_level.txt'
2024-04-28T23:32:18,715   adding 'SigProfilerMatrixGenerator-1.2.26.dist-info/RECORD'
2024-04-28T23:32:19,153   removing build/bdist.linux-armv7l/wheel
2024-04-28T23:32:19,519   Building wheel for sigprofilermatrixgenerator (setup.py): finished with status 'done'
2024-04-28T23:32:19,958   Created wheel for sigprofilermatrixgenerator: filename=SigProfilerMatrixGenerator-1.2.26-py3-none-any.whl size=41038161 sha256=ea277f7374abc39ef038dce3a17970241f1d5d8d105ae805cabbb17a46ddf011
2024-04-28T23:32:19,959   Stored in directory: /tmp/pip-ephem-wheel-cache-87aye8ko/wheels/61/8f/69/cb6e90b56754dff8dd7ab3132efbc57da12fbb1b173f1c74c3
2024-04-28T23:32:20,008 Successfully built sigprofilermatrixgenerator
2024-04-28T23:32:21,065 Removed build tracker: '/tmp/pip-build-tracker-wfrdo3tm'