2024-04-29T17:46:11,587 Created temporary directory: /tmp/pip-build-tracker-dxdn0cz4 2024-04-29T17:46:11,588 Initialized build tracking at /tmp/pip-build-tracker-dxdn0cz4 2024-04-29T17:46:11,589 Created build tracker: /tmp/pip-build-tracker-dxdn0cz4 2024-04-29T17:46:11,589 Entered build tracker: /tmp/pip-build-tracker-dxdn0cz4 2024-04-29T17:46:11,590 Created temporary directory: /tmp/pip-wheel-nflgyh9e 2024-04-29T17:46:11,593 Created temporary directory: /tmp/pip-ephem-wheel-cache-0m_f295g 2024-04-29T17:46:11,615 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-04-29T17:46:11,618 2 location(s) to search for versions of mitos: 2024-04-29T17:46:11,618 * https://pypi.org/simple/mitos/ 2024-04-29T17:46:11,618 * https://www.piwheels.org/simple/mitos/ 2024-04-29T17:46:11,619 Fetching project page and analyzing links: https://pypi.org/simple/mitos/ 2024-04-29T17:46:11,620 Getting page https://pypi.org/simple/mitos/ 2024-04-29T17:46:11,621 Found index url https://pypi.org/simple/ 2024-04-29T17:46:11,835 Fetched page https://pypi.org/simple/mitos/ as application/vnd.pypi.simple.v1+json 2024-04-29T17:46:11,841 Skipping link: No binaries permitted for mitos: https://files.pythonhosted.org/packages/ae/2d/5f1e66a046e59cf6088f44d4a02cae66d498e226365af5fd42e2d660a814/mitos-1.0-py2-none-any.whl (from https://pypi.org/simple/mitos/) 2024-04-29T17:46:11,842 Found link https://files.pythonhosted.org/packages/c5/6e/e1aae4079b0ebbce64897f54f5cd4a3953a0cb741026d16e14e7ae272a48/mitos-1.0.tar.gz (from https://pypi.org/simple/mitos/), version: 1.0 2024-04-29T17:46:11,843 Found link https://files.pythonhosted.org/packages/d7/19/816780e09ecc6a783f146d80bcde73eb7940d074f4feea137ec954bfd437/mitos-1.0.1.tar.gz (from https://pypi.org/simple/mitos/), version: 1.0.1 2024-04-29T17:46:11,843 Found link https://files.pythonhosted.org/packages/38/c7/3dd90bcf0d61c69226ef1632baa3ad0e96d798de36053b4b56ed7660dfdb/mitos-1.0.2.tar.gz (from https://pypi.org/simple/mitos/), version: 1.0.2 2024-04-29T17:46:11,844 Found link https://files.pythonhosted.org/packages/e2/d4/864af2605cc1f45cc78cfed740bbdfba1da59ea9a42c24ef5077c9218501/mitos-1.0.3.tar.gz (from https://pypi.org/simple/mitos/), version: 1.0.3 2024-04-29T17:46:11,845 Found link https://files.pythonhosted.org/packages/8d/32/1aa5eb88f964c3cf5441622648cc4ae30f115db32bdd5dc5bf194a3c112c/mitos-1.0.4.tar.gz (from https://pypi.org/simple/mitos/), version: 1.0.4 2024-04-29T17:46:11,845 Found link https://files.pythonhosted.org/packages/ff/49/f4c711126604aa86abeeda44378786a0903bc53970acf4afa5feb68f72b8/mitos-1.0.5.tar.gz (from https://pypi.org/simple/mitos/), version: 1.0.5 2024-04-29T17:46:11,846 Skipping link: No binaries permitted for mitos: https://files.pythonhosted.org/packages/c3/cd/96e0e1ad1551b8fff56ab89e61231809494dec3ee80f51117b4f5d432452/mitos-1.1.0-py3-none-any.whl (from https://pypi.org/simple/mitos/) 2024-04-29T17:46:11,847 Found link https://files.pythonhosted.org/packages/ce/33/46fd40fd9f4c11f5bf296c2c092f59e36dee233d71a0f032b34c2a64c7ba/mitos-1.1.0.tar.gz (from https://pypi.org/simple/mitos/), version: 1.1.0 2024-04-29T17:46:11,847 Found link https://files.pythonhosted.org/packages/b3/a0/5268d8fec841240195c19e704b552a8b3060768c6710c67c67350ea60f13/mitos-1.1.1.tar.gz (from https://pypi.org/simple/mitos/), version: 1.1.1 2024-04-29T17:46:11,848 Found link https://files.pythonhosted.org/packages/7c/38/4431d42c178a65b3710531867f10ae50c5a49408ccab6c058af277e83e5d/mitos-1.1.2.tar.gz (from https://pypi.org/simple/mitos/), version: 1.1.2 2024-04-29T17:46:11,849 Found link https://files.pythonhosted.org/packages/76/40/e0db56e8dfc65a2a13c8f613c4b5839247b918a1cd5d83b384a6c957928e/mitos-1.1.3.tar.gz (from https://pypi.org/simple/mitos/), version: 1.1.3 2024-04-29T17:46:11,849 Found link https://files.pythonhosted.org/packages/fc/39/368668a4250e85f2a596f996a4067528a2e13ad69d18404d4dac5ca4118f/mitos-1.1.4.tar.gz (from https://pypi.org/simple/mitos/), version: 1.1.4 2024-04-29T17:46:11,850 Found link https://files.pythonhosted.org/packages/aa/6d/1bb441bdbf6da2df6d00bafbcc3bcdca90a5ca20c4c66af513b54741a841/mitos-1.1.5.tar.gz (from https://pypi.org/simple/mitos/), version: 1.1.5 2024-04-29T17:46:11,851 Found link https://files.pythonhosted.org/packages/3a/fa/7f7ad2bc263f9006f3ac6d65bc0644dcff4f36be038e2848d819b55f963e/mitos-1.1.6.tar.gz (from https://pypi.org/simple/mitos/), version: 1.1.6 2024-04-29T17:46:11,852 Found link https://files.pythonhosted.org/packages/cc/3d/33ede707ade9301aeca542cd6e2240eda20d02e0d3fbe1a2f025b5c8f5ea/mitos-1.1.7.tar.gz (from https://pypi.org/simple/mitos/), version: 1.1.7 2024-04-29T17:46:11,852 Found link https://files.pythonhosted.org/packages/f3/fa/7e2b9cef0d99e7792077a4c1116dc9bbe4c085e7b89ea79b74474c00b2b1/mitos-2.0.1.tar.gz (from https://pypi.org/simple/mitos/), version: 2.0.1 2024-04-29T17:46:11,853 Found link https://files.pythonhosted.org/packages/d7/53/5d215fe8689055dd329a27202f9dc7f66e23548f3d2ad3fa55d98dc56988/mitos-2.0.2.tar.gz (from https://pypi.org/simple/mitos/), version: 2.0.2 2024-04-29T17:46:11,854 Found link https://files.pythonhosted.org/packages/cd/97/a8bf95d5e26b51071d9f342dc475891425b223b6add347a6dbf9412937f1/mitos-2.0.3.tar.gz (from https://pypi.org/simple/mitos/), version: 2.0.3 2024-04-29T17:46:11,854 Found link https://files.pythonhosted.org/packages/39/9f/6cdac19a8d50915e2e5285b447077459af9c6524f980ded6657dc205593d/mitos-2.0.4.tar.gz (from https://pypi.org/simple/mitos/), version: 2.0.4 2024-04-29T17:46:11,855 Found link https://files.pythonhosted.org/packages/d0/16/8040a37887377e3992b0874ab441af54e16030fd23eb844bbf5293597c99/mitos-2.0.5.tar.gz (from https://pypi.org/simple/mitos/), version: 2.0.5 2024-04-29T17:46:11,855 Found link https://files.pythonhosted.org/packages/40/ef/5a93579c1ebc63ca8fe71cfe541bca389a0f9410b9a2c1ceff148f83af79/mitos-2.0.6.tar.gz (from https://pypi.org/simple/mitos/), version: 2.0.6 2024-04-29T17:46:11,856 Found link https://files.pythonhosted.org/packages/1f/a2/32eb96227aae3a719794cc922d839b8c38ee5c315087bf095792c48f996d/mitos-2.0.7.tar.gz (from https://pypi.org/simple/mitos/), version: 2.0.7 2024-04-29T17:46:11,856 Found link https://files.pythonhosted.org/packages/d5/7f/b3e5c5c83352beb13677186899379de3c50a2222dc8faac16632f600d4b6/mitos-2.0.8.tar.gz (from https://pypi.org/simple/mitos/), version: 2.0.8 2024-04-29T17:46:11,857 Skipping link: No binaries permitted for mitos: https://files.pythonhosted.org/packages/9d/93/5f2a1097bfa507acbf7dd6ac677f6df14df61692cccb42d28c34edb7ca5b/mitos-2.1.0-py3-none-any.whl (from https://pypi.org/simple/mitos/) 2024-04-29T17:46:11,858 Found link https://files.pythonhosted.org/packages/f8/f4/2950dea175f0bda896b88ac2ac13007a1d007252a583ddd328b176fb54a5/mitos-2.1.0.tar.gz (from https://pypi.org/simple/mitos/), version: 2.1.0 2024-04-29T17:46:11,859 Found link https://files.pythonhosted.org/packages/57/78/2fde036a6c767aa5fb8c1102526af749ee13ad426b295289265c548384f9/mitos-2.1.1.tar.gz (from https://pypi.org/simple/mitos/), version: 2.1.1 2024-04-29T17:46:11,859 Found link https://files.pythonhosted.org/packages/74/63/f90f359df86c01e68f5c678eef30d929b9311e7bb80f16071a1532515a0a/mitos-2.1.2.tar.gz (from https://pypi.org/simple/mitos/), version: 2.1.2 2024-04-29T17:46:11,860 Found link https://files.pythonhosted.org/packages/d6/1f/b6dbc4704555e91e3efa3184fc90b04e901dc6e787c37091d445dd50bd4b/mitos-2.1.3.tar.gz (from https://pypi.org/simple/mitos/), version: 2.1.3 2024-04-29T17:46:11,861 Found link https://files.pythonhosted.org/packages/ff/1f/af7beaaaa133f2f55cdbfbf5430c0e9a3102b101dd0a8d2c6f22376af56b/mitos-2.1.4.tar.gz (from https://pypi.org/simple/mitos/), version: 2.1.4 2024-04-29T17:46:11,861 Found link https://files.pythonhosted.org/packages/c9/6d/853d05a3ec8c81c73bb23ba0862ded05aa4c2fdc74cdc796c982c6896476/mitos-2.1.5.tar.gz (from https://pypi.org/simple/mitos/), version: 2.1.5 2024-04-29T17:46:11,862 Found link https://files.pythonhosted.org/packages/96/9a/97d5e59e6680b450e24d0c3313f112b8818f7d2f6c6fbc90d685cf7fe47c/mitos-2.1.6.tar.gz (from https://pypi.org/simple/mitos/), version: 2.1.6 2024-04-29T17:46:11,862 Found link https://files.pythonhosted.org/packages/ae/13/4befcffdab2028eaed3986939d74736846d66cde1d2c66a464d03a70c860/mitos-2.1.7.tar.gz (from https://pypi.org/simple/mitos/), version: 2.1.7 2024-04-29T17:46:11,863 Found link https://files.pythonhosted.org/packages/2d/87/fa237a6183642f2470b3dfe1273f0dd2a64fd46480cd1c2bc41b05233a63/mitos-2.1.8.tar.gz (from https://pypi.org/simple/mitos/), version: 2.1.8 2024-04-29T17:46:11,864 Found link https://files.pythonhosted.org/packages/5a/8a/d85bd8431046111dc7b8709d9b14bb5fc5cf6eb4ae7ed9cc898e91173983/mitos-2.1.9.tar.gz (from https://pypi.org/simple/mitos/), version: 2.1.9 2024-04-29T17:46:11,865 Fetching project page and analyzing links: https://www.piwheels.org/simple/mitos/ 2024-04-29T17:46:11,865 Getting page https://www.piwheels.org/simple/mitos/ 2024-04-29T17:46:11,867 Found index url https://www.piwheels.org/simple/ 2024-04-29T17:46:12,197 Fetched page https://www.piwheels.org/simple/mitos/ as text/html 2024-04-29T17:46:12,209 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.1.8-py3-none-any.whl#sha256=c68c4708043cf10b33dd71b30ee207ed4d3923e12ca21421cdf8c98b1cb64451 (from https://www.piwheels.org/simple/mitos/) 2024-04-29T17:46:12,211 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.1.7-py3-none-any.whl#sha256=d4ac25651e00beb38a546bef9ff493efdfedc7dc904f673b5b079bb056214850 (from https://www.piwheels.org/simple/mitos/) 2024-04-29T17:46:12,212 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.1.6-py3-none-any.whl#sha256=bed8aeda4eebf1ce891081ec67cf34897f2e5da8800cfb51c78593616a3304ea (from https://www.piwheels.org/simple/mitos/) 2024-04-29T17:46:12,213 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.1.5-py3-none-any.whl#sha256=c404e62da7a2d919a7cf0999ba3ce479541d935e38999ed75c09dc9a38f6b6bd (from https://www.piwheels.org/simple/mitos/) 2024-04-29T17:46:12,214 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.1.4-py3-none-any.whl#sha256=249c87e42350fbefa1e3281d0e81f795c7710a95303b226bdc818b51615162e0 (from https://www.piwheels.org/simple/mitos/) 2024-04-29T17:46:12,215 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.1.3-py3-none-any.whl#sha256=dd19f4a9b02b695465d7d7861d7f611d1c73f231e6205b881d1617cd733bdd87 (from https://www.piwheels.org/simple/mitos/) 2024-04-29T17:46:12,216 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.1.2-py3-none-any.whl#sha256=c98234624cb7939861858030fbac10b88073159ea24b334b42e1cfd70254088d (from https://www.piwheels.org/simple/mitos/) 2024-04-29T17:46:12,216 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.1.1-py3-none-any.whl#sha256=698670abccda0918af0b490888cb195f86172e217766c9672bfedae33666ac82 (from https://www.piwheels.org/simple/mitos/) 2024-04-29T17:46:12,217 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.1.0-py3-none-any.whl#sha256=d4b006045b98620155cbed38de6ecf0d0ffb030cebc4d6e6e947cb015b8ce746 (from https://www.piwheels.org/simple/mitos/) 2024-04-29T17:46:12,218 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.0.8-py3-none-any.whl#sha256=5e88aa49c5bba746d511e0e619295e3c59916c71ba94246f984e44dcfef6a06c (from https://www.piwheels.org/simple/mitos/) 2024-04-29T17:46:12,219 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.0.7-py3-none-any.whl#sha256=97e98856e946735f44b3df83d67645e0dac8b411edb7774df74c00a44832e1d6 (from https://www.piwheels.org/simple/mitos/) 2024-04-29T17:46:12,219 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.0.6-py3-none-any.whl#sha256=8fba2e7cf9c22c6a728a1f8141764a77a6a4a27d7f7e50106b6e43832857b149 (from https://www.piwheels.org/simple/mitos/) 2024-04-29T17:46:12,220 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.0.5-py3-none-any.whl#sha256=ed4998969ebae7bf1688b78cdac8f19ca359f123ea79c2acd2654dd454a53f22 (from https://www.piwheels.org/simple/mitos/) 2024-04-29T17:46:12,221 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.0.4-py3-none-any.whl#sha256=71ac10ffdc0a236d68e4fd82a700ae35a92f0b23a09242c8b99485ccbadb10cc (from https://www.piwheels.org/simple/mitos/) 2024-04-29T17:46:12,222 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.0.3-py3-none-any.whl#sha256=4da7d3530901e0732adc63ab4afa0c5d9a40558469b2ccee71ea4fbad466603b (from https://www.piwheels.org/simple/mitos/) 2024-04-29T17:46:12,223 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.0.2-py3-none-any.whl#sha256=0cd775b72e2dca4acf2f9c6f4d591abaeb00b983e4882fcf536d934a8263d342 (from https://www.piwheels.org/simple/mitos/) 2024-04-29T17:46:12,223 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.0.1-py3-none-any.whl#sha256=307713427f698c0f3449d782d86287f1494fd2ff773a9fc407fbd29a0de53aed (from https://www.piwheels.org/simple/mitos/) 2024-04-29T17:46:12,224 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-1.1.6-py3-none-any.whl#sha256=cb01f66c23f24077fc8a306d97131924859e293c06f97411730d7c8d75f4bf1a (from https://www.piwheels.org/simple/mitos/) 2024-04-29T17:46:12,224 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-1.1.5-py3-none-any.whl#sha256=ae7a240619a3688130de5e6be1d0c3ee8dbcfaf3aab6f5f193d8485e02dc29df (from https://www.piwheels.org/simple/mitos/) 2024-04-29T17:46:12,225 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-1.1.4-py3-none-any.whl#sha256=94e72cf1eb3cbbe067f3996d78d50a7fe9e91350bbd146f7babf90321ecb9ffc (from https://www.piwheels.org/simple/mitos/) 2024-04-29T17:46:12,226 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-1.1.3-py3-none-any.whl#sha256=92bec0ea93c83f4d494767e69401c1dcc1dd8f562917c3d110ec0a525d142a6a (from https://www.piwheels.org/simple/mitos/) 2024-04-29T17:46:12,226 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-1.1.2-py3-none-any.whl#sha256=b237b128b553848c12c5d387b10a20bbcb734b8672b3bf56fb2f3995e169c03d (from https://www.piwheels.org/simple/mitos/) 2024-04-29T17:46:12,227 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-1.1.1-py3-none-any.whl#sha256=f0970e0e530a2a7759daafc81f1c79460dc85d15c1f34551d8394dce187dfe1c (from https://www.piwheels.org/simple/mitos/) 2024-04-29T17:46:12,228 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-1.1.0-py3-none-any.whl#sha256=424b5172258baf2837d8a45e89224c12fdc3cc2a8f4ba0894e5c74111e754e5d (from https://www.piwheels.org/simple/mitos/) 2024-04-29T17:46:12,229 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-1.0.5-py3-none-any.whl#sha256=f27a041efc520420cbffbb63a6c428a2ace092d6ffdc47942d6b9c434a281629 (from https://www.piwheels.org/simple/mitos/) 2024-04-29T17:46:12,229 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-1.0.4-py3-none-any.whl#sha256=4c35b6595c7a62189502f6becaed4b2fe147f7ed6c6ee8d6b69fb4fda5e2139a (from https://www.piwheels.org/simple/mitos/) 2024-04-29T17:46:12,230 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-1.0.3-py3-none-any.whl#sha256=7b62f2fcef8414d2a429f2f3c033e85c9377805612113e7103fa6793aa083cbc (from https://www.piwheels.org/simple/mitos/) 2024-04-29T17:46:12,231 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-1.0.2-py3-none-any.whl#sha256=ba6a5f7a1d3a0a95106d401e13f7639c5ed2ecb367ab7899e2204b14aa9930a1 (from https://www.piwheels.org/simple/mitos/) 2024-04-29T17:46:12,231 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-1.0.1-py3-none-any.whl#sha256=d216729f10eb3463d947658451c8f70fd97a9b2ca94cea55221f7a50f85749e2 (from https://www.piwheels.org/simple/mitos/) 2024-04-29T17:46:12,232 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-1.0-py3-none-any.whl#sha256=4f914c63f700f85163b395353782bcb87e49392f63c151f387dd4514694d0ac1 (from https://www.piwheels.org/simple/mitos/) 2024-04-29T17:46:12,233 Skipping link: not a file: https://www.piwheels.org/simple/mitos/ 2024-04-29T17:46:12,234 Skipping link: not a file: https://pypi.org/simple/mitos/ 2024-04-29T17:46:12,267 Given no hashes to check 1 links for project 'mitos': discarding no candidates 2024-04-29T17:46:12,295 Collecting mitos==2.1.9 2024-04-29T17:46:12,299 Created temporary directory: /tmp/pip-unpack-pm22q1lg 2024-04-29T17:46:12,530 Downloading mitos-2.1.9.tar.gz (273 kB) 2024-04-29T17:46:12,854 Added mitos==2.1.9 from https://files.pythonhosted.org/packages/5a/8a/d85bd8431046111dc7b8709d9b14bb5fc5cf6eb4ae7ed9cc898e91173983/mitos-2.1.9.tar.gz to build tracker '/tmp/pip-build-tracker-dxdn0cz4' 2024-04-29T17:46:12,855 Running setup.py (path:/tmp/pip-wheel-nflgyh9e/mitos_8dbb07f7d4284f3bb5a6bc5955a0bac3/setup.py) egg_info for package mitos 2024-04-29T17:46:12,856 Created temporary directory: /tmp/pip-pip-egg-info-tvl1fi8v 2024-04-29T17:46:12,856 Preparing metadata (setup.py): started 2024-04-29T17:46:12,858 Running command python setup.py egg_info 2024-04-29T17:46:13,979 running egg_info 2024-04-29T17:46:13,981 creating /tmp/pip-pip-egg-info-tvl1fi8v/mitos.egg-info 2024-04-29T17:46:14,006 writing /tmp/pip-pip-egg-info-tvl1fi8v/mitos.egg-info/PKG-INFO 2024-04-29T17:46:14,009 writing dependency_links to /tmp/pip-pip-egg-info-tvl1fi8v/mitos.egg-info/dependency_links.txt 2024-04-29T17:46:14,011 writing requirements to /tmp/pip-pip-egg-info-tvl1fi8v/mitos.egg-info/requires.txt 2024-04-29T17:46:14,012 writing top-level names to /tmp/pip-pip-egg-info-tvl1fi8v/mitos.egg-info/top_level.txt 2024-04-29T17:46:14,014 writing manifest file '/tmp/pip-pip-egg-info-tvl1fi8v/mitos.egg-info/SOURCES.txt' 2024-04-29T17:46:14,135 reading manifest file '/tmp/pip-pip-egg-info-tvl1fi8v/mitos.egg-info/SOURCES.txt' 2024-04-29T17:46:14,137 reading manifest template 'MANIFEST.in' 2024-04-29T17:46:14,138 warning: no files found matching 'mitos/codons/gc.prt' 2024-04-29T17:46:14,140 adding license file 'LICENSE' 2024-04-29T17:46:14,143 writing manifest file '/tmp/pip-pip-egg-info-tvl1fi8v/mitos.egg-info/SOURCES.txt' 2024-04-29T17:46:14,261 Preparing metadata (setup.py): finished with status 'done' 2024-04-29T17:46:14,265 Source in /tmp/pip-wheel-nflgyh9e/mitos_8dbb07f7d4284f3bb5a6bc5955a0bac3 has version 2.1.9, which satisfies requirement mitos==2.1.9 from https://files.pythonhosted.org/packages/5a/8a/d85bd8431046111dc7b8709d9b14bb5fc5cf6eb4ae7ed9cc898e91173983/mitos-2.1.9.tar.gz 2024-04-29T17:46:14,266 Removed mitos==2.1.9 from https://files.pythonhosted.org/packages/5a/8a/d85bd8431046111dc7b8709d9b14bb5fc5cf6eb4ae7ed9cc898e91173983/mitos-2.1.9.tar.gz from build tracker '/tmp/pip-build-tracker-dxdn0cz4' 2024-04-29T17:46:14,270 Created temporary directory: /tmp/pip-unpack-rzzbeqgg 2024-04-29T17:46:14,271 Created temporary directory: /tmp/pip-unpack-8xh_dbm0 2024-04-29T17:46:14,275 Building wheels for collected packages: mitos 2024-04-29T17:46:14,279 Created temporary directory: /tmp/pip-wheel-p2k8on4a 2024-04-29T17:46:14,280 Building wheel for mitos (setup.py): started 2024-04-29T17:46:14,281 Destination directory: /tmp/pip-wheel-p2k8on4a 2024-04-29T17:46:14,282 Running command python setup.py bdist_wheel 2024-04-29T17:46:15,372 running bdist_wheel 2024-04-29T17:46:15,470 running build 2024-04-29T17:46:15,470 running build_py 2024-04-29T17:46:15,499 creating build 2024-04-29T17:46:15,500 creating build/lib 2024-04-29T17:46:15,501 creating build/lib/mitos 2024-04-29T17:46:15,502 copying mitos/trna-cm.py -> build/lib/mitos 2024-04-29T17:46:15,509 copying mitos/create_prot_fasta.py -> build/lib/mitos 2024-04-29T17:46:15,512 copying mitos/mitos-extension2.py -> build/lib/mitos 2024-04-29T17:46:15,514 copying mitos/skew.py -> build/lib/mitos 2024-04-29T17:46:15,517 copying mitos/get-wancy.py -> build/lib/mitos 2024-04-29T17:46:15,519 copying mitos/convert_tree.py -> build/lib/mitos 2024-04-29T17:46:15,522 copying mitos/ogre-geneorder.py -> build/lib/mitos 2024-04-29T17:46:15,525 copying mitos/trnascan_parse_separate.py -> build/lib/mitos 2024-04-29T17:46:15,527 copying mitos/mitoloc.py -> build/lib/mitos 2024-04-29T17:46:15,529 copying mitos/mitoch_revisions.py -> build/lib/mitos 2024-04-29T17:46:15,533 copying mitos/mitos-extension.py -> build/lib/mitos 2024-04-29T17:46:15,536 copying mitos/inihit.py -> build/lib/mitos 2024-04-29T17:46:15,538 copying mitos/__init__.py -> build/lib/mitos 2024-04-29T17:46:15,540 copying mitos/CONFIG.py -> build/lib/mitos 2024-04-29T17:46:15,542 copying mitos/trnadist.py -> build/lib/mitos 2024-04-29T17:46:15,545 copying mitos/merge_results.py -> build/lib/mitos 2024-04-29T17:46:15,547 copying mitos/mumcmp.py -> build/lib/mitos 2024-04-29T17:46:15,549 copying mitos/update-mitolog.py -> build/lib/mitos 2024-04-29T17:46:15,551 copying mitos/codoncount.py -> build/lib/mitos 2024-04-29T17:46:15,552 copying mitos/removegene.py -> build/lib/mitos 2024-04-29T17:46:15,554 copying mitos/names.py -> build/lib/mitos 2024-04-29T17:46:15,556 copying mitos/booreparser.py -> build/lib/mitos 2024-04-29T17:46:15,558 copying mitos/prepareFiles.py -> build/lib/mitos 2024-04-29T17:46:15,559 copying mitos/cmsearch_parse_separate.py -> build/lib/mitos 2024-04-29T17:46:15,562 creating build/lib/mitos/mitfi 2024-04-29T17:46:15,563 copying mitos/mitfi/__init__.py -> build/lib/mitos/mitfi 2024-04-29T17:46:15,566 creating build/lib/mitos/mitofile 2024-04-29T17:46:15,567 copying mitos/mitofile/__init__.py -> build/lib/mitos/mitofile 2024-04-29T17:46:15,569 creating build/lib/mitos/webserver 2024-04-29T17:46:15,570 copying mitos/webserver/__init__.py -> build/lib/mitos/webserver 2024-04-29T17:46:15,574 creating build/lib/mitos/blast 2024-04-29T17:46:15,575 copying mitos/blast/__init__.py -> build/lib/mitos/blast 2024-04-29T17:46:15,578 creating build/lib/mitos/tax 2024-04-29T17:46:15,579 copying mitos/tax/__init__.py -> build/lib/mitos/tax 2024-04-29T17:46:15,582 creating build/lib/mitos/draw 2024-04-29T17:46:15,583 copying mitos/draw/__init__.py -> build/lib/mitos/draw 2024-04-29T17:46:15,586 creating build/lib/mitos/rna 2024-04-29T17:46:15,586 copying mitos/rna/vienna.py -> build/lib/mitos/rna 2024-04-29T17:46:15,588 copying mitos/rna/forester.py -> build/lib/mitos/rna 2024-04-29T17:46:15,590 copying mitos/rna/__init__.py -> build/lib/mitos/rna 2024-04-29T17:46:15,592 creating build/lib/mitos/mergefeature 2024-04-29T17:46:15,593 copying mitos/mergefeature/__init__.py -> build/lib/mitos/mergefeature 2024-04-29T17:46:15,596 creating build/lib/mitos/tbl 2024-04-29T17:46:15,597 copying mitos/tbl/__init__.py -> build/lib/mitos/tbl 2024-04-29T17:46:15,600 creating build/lib/mitos/gfffile 2024-04-29T17:46:15,600 copying mitos/gfffile/__init__.py -> build/lib/mitos/gfffile 2024-04-29T17:46:15,603 creating build/lib/mitos/mito 2024-04-29T17:46:15,604 copying mitos/mito/__init__.py -> build/lib/mitos/mito 2024-04-29T17:46:15,606 creating build/lib/mitos/sequence 2024-04-29T17:46:15,607 copying mitos/sequence/degenerate.py -> build/lib/mitos/sequence 2024-04-29T17:46:15,609 copying mitos/sequence/__init__.py -> build/lib/mitos/sequence 2024-04-29T17:46:15,612 creating build/lib/mitos/protfeat 2024-04-29T17:46:15,612 copying mitos/protfeat/__init__.py -> build/lib/mitos/protfeat 2024-04-29T17:46:15,616 creating build/lib/mitos/gb 2024-04-29T17:46:15,617 copying mitos/gb/__init__.py -> build/lib/mitos/gb 2024-04-29T17:46:15,621 copying mitos/gb/unify.py -> build/lib/mitos/gb 2024-04-29T17:46:15,625 creating build/lib/mitos/trna 2024-04-29T17:46:15,626 copying mitos/trna/arwenscan.py -> build/lib/mitos/trna 2024-04-29T17:46:15,629 copying mitos/trna/trnascan.py -> build/lib/mitos/trna 2024-04-29T17:46:15,631 copying mitos/trna/__init__.py -> build/lib/mitos/trna 2024-04-29T17:46:15,634 creating build/lib/mitos/extprog 2024-04-29T17:46:15,635 copying mitos/extprog/__init__.py -> build/lib/mitos/extprog 2024-04-29T17:46:15,637 creating build/lib/mitos/feature 2024-04-29T17:46:15,638 copying mitos/feature/__init__.py -> build/lib/mitos/feature 2024-04-29T17:46:15,642 creating build/lib/mitos/update 2024-04-29T17:46:15,643 copying mitos/update/__init__.py -> build/lib/mitos/update 2024-04-29T17:46:15,646 creating build/lib/mitos/util 2024-04-29T17:46:15,647 copying mitos/util/__init__.py -> build/lib/mitos/util 2024-04-29T17:46:15,649 creating build/lib/mitos/bedfile 2024-04-29T17:46:15,650 copying mitos/bedfile/__init__.py -> build/lib/mitos/bedfile 2024-04-29T17:46:15,652 running egg_info 2024-04-29T17:46:15,708 writing mitos.egg-info/PKG-INFO 2024-04-29T17:46:15,711 writing dependency_links to mitos.egg-info/dependency_links.txt 2024-04-29T17:46:15,713 writing requirements to mitos.egg-info/requires.txt 2024-04-29T17:46:15,714 writing top-level names to mitos.egg-info/top_level.txt 2024-04-29T17:46:15,755 reading manifest file 'mitos.egg-info/SOURCES.txt' 2024-04-29T17:46:15,758 reading manifest template 'MANIFEST.in' 2024-04-29T17:46:15,759 warning: no files found matching 'mitos/codons/gc.prt' 2024-04-29T17:46:15,760 adding license file 'LICENSE' 2024-04-29T17:46:15,765 writing manifest file 'mitos.egg-info/SOURCES.txt' 2024-04-29T17:46:15,767 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'mitos.mitfi.parser' is absent from the `packages` configuration. 2024-04-29T17:46:15,768 !! 2024-04-29T17:46:15,769 ******************************************************************************** 2024-04-29T17:46:15,770 ############################ 2024-04-29T17:46:15,770 # Package would be ignored # 2024-04-29T17:46:15,771 ############################ 2024-04-29T17:46:15,771 Python recognizes 'mitos.mitfi.parser' as an importable package[^1], 2024-04-29T17:46:15,772 but it is absent from setuptools' `packages` configuration. 2024-04-29T17:46:15,773 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-29T17:46:15,774 package, please make sure that 'mitos.mitfi.parser' is explicitly added 2024-04-29T17:46:15,775 to the `packages` configuration field. 2024-04-29T17:46:15,776 Alternatively, you can also rely on setuptools' discovery methods 2024-04-29T17:46:15,777 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-29T17:46:15,778 instead of `find_packages(...)`/`find:`). 2024-04-29T17:46:15,779 You can read more about "package discovery" on setuptools documentation page: 2024-04-29T17:46:15,781 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-29T17:46:15,782 If you don't want 'mitos.mitfi.parser' to be distributed and are 2024-04-29T17:46:15,782 already explicitly excluding 'mitos.mitfi.parser' via 2024-04-29T17:46:15,783 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-29T17:46:15,783 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-29T17:46:15,784 combination with a more fine grained `package-data` configuration. 2024-04-29T17:46:15,785 You can read more about "package data files" on setuptools documentation page: 2024-04-29T17:46:15,786 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-29T17:46:15,788 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-29T17:46:15,788 even if it does not contain any `.py` files. 2024-04-29T17:46:15,789 On the other hand, currently there is no concept of package data 2024-04-29T17:46:15,789 directory, all directories are treated like packages. 2024-04-29T17:46:15,790 ******************************************************************************** 2024-04-29T17:46:15,791 !! 2024-04-29T17:46:15,791 check.warn(importable) 2024-04-29T17:46:15,792 copying mitos/plotprot.R -> build/lib/mitos 2024-04-29T17:46:15,792 copying mitos/plotrna.R -> build/lib/mitos 2024-04-29T17:46:15,793 copying mitos/plotstst.R -> build/lib/mitos 2024-04-29T17:46:15,793 creating build/lib/mitos/mitfi/parser 2024-04-29T17:46:15,794 copying mitos/mitfi/parser/improve_infernal_structure.jar -> build/lib/mitos/mitfi/parser 2024-04-29T17:46:15,796 copying mitos/mitfi/parser/mitfiGeneticCodes -> build/lib/mitos/mitfi/parser 2024-04-29T17:46:15,799 copying mitos/mitfi/parser/mitfi_import-1.1.jar -> build/lib/mitos/mitfi/parser 2024-04-29T17:46:15,802 copying mitos/mitfi/parser/mitfi_import-1.1.jar.old -> build/lib/mitos/mitfi/parser 2024-04-29T17:46:15,805 copying mitos/mitfi/parser/mitfi_import-1.1.jar.org -> build/lib/mitos/mitfi/parser 2024-04-29T17:46:15,808 copying mitos/mitfi/parser/mitfi_import-1.1.jar.org.pre-circ -> build/lib/mitos/mitfi/parser 2024-04-29T17:46:15,811 copying mitos/mitfi/parser/mitfi_import.jar -> build/lib/mitos/mitfi/parser 2024-04-29T17:46:15,814 copying mitos/webserver/help.txt -> build/lib/mitos/webserver 2024-04-29T17:46:15,817 copying mitos/webserver/history.txt -> build/lib/mitos/webserver 2024-04-29T17:46:15,819 copying mitos/webserver/index.txt -> build/lib/mitos/webserver 2024-04-29T17:46:15,821 copying mitos/webserver/news.txt -> build/lib/mitos/webserver 2024-04-29T17:46:15,823 copying mitos/webserver/upload.txt -> build/lib/mitos/webserver 2024-04-29T17:46:15,825 copying mitos/webserver/wait.txt -> build/lib/mitos/webserver 2024-04-29T17:46:15,834 running build_scripts 2024-04-29T17:46:15,835 creating build/scripts-3.11 2024-04-29T17:46:15,835 copying and adjusting runmitos.py -> build/scripts-3.11 2024-04-29T17:46:15,840 copying and adjusting drawmitos.py -> build/scripts-3.11 2024-04-29T17:46:15,841 copying and adjusting analyse.py -> build/scripts-3.11 2024-04-29T17:46:15,844 copying and adjusting gcpp.py -> build/scripts-3.11 2024-04-29T17:46:15,846 copying and adjusting geneorder.py -> build/scripts-3.11 2024-04-29T17:46:15,848 copying and adjusting getfeatures.py -> build/scripts-3.11 2024-04-29T17:46:15,850 copying and adjusting getinfo.py -> build/scripts-3.11 2024-04-29T17:46:15,851 copying and adjusting refseqsplit.py -> build/scripts-3.11 2024-04-29T17:46:15,853 copying and adjusting subseq.py -> build/scripts-3.11 2024-04-29T17:46:15,855 copying and adjusting taxtree.py -> build/scripts-3.11 2024-04-29T17:46:15,857 copying update-blastdb.py -> build/scripts-3.11 2024-04-29T17:46:15,859 copying mitos/plotprot.R -> build/scripts-3.11 2024-04-29T17:46:15,862 copying mitos/plotstst.R -> build/scripts-3.11 2024-04-29T17:46:15,864 copying mitos/plotrna.R -> build/scripts-3.11 2024-04-29T17:46:15,865 changing mode of build/scripts-3.11/runmitos.py from 644 to 755 2024-04-29T17:46:15,866 changing mode of build/scripts-3.11/drawmitos.py from 644 to 755 2024-04-29T17:46:15,866 changing mode of build/scripts-3.11/analyse.py from 644 to 755 2024-04-29T17:46:15,867 changing mode of build/scripts-3.11/gcpp.py from 644 to 755 2024-04-29T17:46:15,867 changing mode of build/scripts-3.11/geneorder.py from 644 to 755 2024-04-29T17:46:15,868 changing mode of build/scripts-3.11/getfeatures.py from 644 to 755 2024-04-29T17:46:15,868 changing mode of build/scripts-3.11/getinfo.py from 644 to 755 2024-04-29T17:46:15,869 changing mode of build/scripts-3.11/refseqsplit.py from 644 to 755 2024-04-29T17:46:15,870 changing mode of build/scripts-3.11/subseq.py from 644 to 755 2024-04-29T17:46:15,870 changing mode of build/scripts-3.11/taxtree.py from 644 to 755 2024-04-29T17:46:15,871 changing mode of build/scripts-3.11/update-blastdb.py from 644 to 755 2024-04-29T17:46:15,894 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-04-29T17:46:15,895 !! 2024-04-29T17:46:15,896 ******************************************************************************** 2024-04-29T17:46:15,896 Please avoid running ``setup.py`` directly. 2024-04-29T17:46:15,897 Instead, use pypa/build, pypa/installer or other 2024-04-29T17:46:15,897 standards-based tools. 2024-04-29T17:46:15,898 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-04-29T17:46:15,898 ******************************************************************************** 2024-04-29T17:46:15,899 !! 2024-04-29T17:46:15,900 self.initialize_options() 2024-04-29T17:46:15,920 installing to build/bdist.linux-armv7l/wheel 2024-04-29T17:46:15,920 running install 2024-04-29T17:46:15,944 running install_lib 2024-04-29T17:46:15,969 creating build/bdist.linux-armv7l 2024-04-29T17:46:15,969 creating build/bdist.linux-armv7l/wheel 2024-04-29T17:46:15,971 creating build/bdist.linux-armv7l/wheel/mitos 2024-04-29T17:46:15,972 copying build/lib/mitos/trna-cm.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T17:46:15,977 copying build/lib/mitos/create_prot_fasta.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T17:46:15,980 creating build/bdist.linux-armv7l/wheel/mitos/mitfi 2024-04-29T17:46:15,981 copying build/lib/mitos/mitfi/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/mitfi 2024-04-29T17:46:15,984 creating build/bdist.linux-armv7l/wheel/mitos/mitfi/parser 2024-04-29T17:46:15,985 copying build/lib/mitos/mitfi/parser/mitfiGeneticCodes -> build/bdist.linux-armv7l/wheel/mitos/mitfi/parser 2024-04-29T17:46:15,988 copying build/lib/mitos/mitfi/parser/mitfi_import-1.1.jar.old -> build/bdist.linux-armv7l/wheel/mitos/mitfi/parser 2024-04-29T17:46:15,991 copying build/lib/mitos/mitfi/parser/mitfi_import-1.1.jar -> build/bdist.linux-armv7l/wheel/mitos/mitfi/parser 2024-04-29T17:46:15,995 copying build/lib/mitos/mitfi/parser/mitfi_import-1.1.jar.org.pre-circ -> build/bdist.linux-armv7l/wheel/mitos/mitfi/parser 2024-04-29T17:46:15,998 copying build/lib/mitos/mitfi/parser/improve_infernal_structure.jar -> build/bdist.linux-armv7l/wheel/mitos/mitfi/parser 2024-04-29T17:46:16,001 copying build/lib/mitos/mitfi/parser/mitfi_import-1.1.jar.org -> build/bdist.linux-armv7l/wheel/mitos/mitfi/parser 2024-04-29T17:46:16,006 copying build/lib/mitos/mitfi/parser/mitfi_import.jar -> build/bdist.linux-armv7l/wheel/mitos/mitfi/parser 2024-04-29T17:46:16,011 creating build/bdist.linux-armv7l/wheel/mitos/mitofile 2024-04-29T17:46:16,012 copying build/lib/mitos/mitofile/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/mitofile 2024-04-29T17:46:16,015 copying build/lib/mitos/mitos-extension2.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T17:46:16,018 copying build/lib/mitos/skew.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T17:46:16,021 copying build/lib/mitos/get-wancy.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T17:46:16,023 copying build/lib/mitos/convert_tree.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T17:46:16,027 creating build/bdist.linux-armv7l/wheel/mitos/webserver 2024-04-29T17:46:16,028 copying build/lib/mitos/webserver/news.txt -> build/bdist.linux-armv7l/wheel/mitos/webserver 2024-04-29T17:46:16,030 copying build/lib/mitos/webserver/help.txt -> build/bdist.linux-armv7l/wheel/mitos/webserver 2024-04-29T17:46:16,033 copying build/lib/mitos/webserver/history.txt -> build/bdist.linux-armv7l/wheel/mitos/webserver 2024-04-29T17:46:16,035 copying build/lib/mitos/webserver/wait.txt -> build/bdist.linux-armv7l/wheel/mitos/webserver 2024-04-29T17:46:16,037 copying build/lib/mitos/webserver/index.txt -> build/bdist.linux-armv7l/wheel/mitos/webserver 2024-04-29T17:46:16,040 copying build/lib/mitos/webserver/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/webserver 2024-04-29T17:46:16,043 copying build/lib/mitos/webserver/upload.txt -> build/bdist.linux-armv7l/wheel/mitos/webserver 2024-04-29T17:46:16,045 copying build/lib/mitos/ogre-geneorder.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T17:46:16,048 creating build/bdist.linux-armv7l/wheel/mitos/blast 2024-04-29T17:46:16,049 copying build/lib/mitos/blast/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/blast 2024-04-29T17:46:16,054 copying build/lib/mitos/trnascan_parse_separate.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T17:46:16,057 copying build/lib/mitos/plotrna.R -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T17:46:16,059 copying build/lib/mitos/mitoloc.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T17:46:16,064 copying build/lib/mitos/mitoch_revisions.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T17:46:16,070 creating build/bdist.linux-armv7l/wheel/mitos/tax 2024-04-29T17:46:16,071 copying build/lib/mitos/tax/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/tax 2024-04-29T17:46:16,073 copying build/lib/mitos/plotprot.R -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T17:46:16,076 creating build/bdist.linux-armv7l/wheel/mitos/draw 2024-04-29T17:46:16,077 copying build/lib/mitos/draw/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/draw 2024-04-29T17:46:16,080 creating build/bdist.linux-armv7l/wheel/mitos/rna 2024-04-29T17:46:16,081 copying build/lib/mitos/rna/vienna.py -> build/bdist.linux-armv7l/wheel/mitos/rna 2024-04-29T17:46:16,083 copying build/lib/mitos/rna/forester.py -> build/bdist.linux-armv7l/wheel/mitos/rna 2024-04-29T17:46:16,086 copying build/lib/mitos/rna/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/rna 2024-04-29T17:46:16,087 copying build/lib/mitos/mitos-extension.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T17:46:16,090 creating build/bdist.linux-armv7l/wheel/mitos/mergefeature 2024-04-29T17:46:16,091 copying build/lib/mitos/mergefeature/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/mergefeature 2024-04-29T17:46:16,093 copying build/lib/mitos/inihit.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T17:46:16,096 creating build/bdist.linux-armv7l/wheel/mitos/tbl 2024-04-29T17:46:16,097 copying build/lib/mitos/tbl/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/tbl 2024-04-29T17:46:16,099 copying build/lib/mitos/__init__.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T17:46:16,101 copying build/lib/mitos/CONFIG.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T17:46:16,103 creating build/bdist.linux-armv7l/wheel/mitos/gfffile 2024-04-29T17:46:16,104 copying build/lib/mitos/gfffile/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/gfffile 2024-04-29T17:46:16,106 copying build/lib/mitos/trnadist.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T17:46:16,109 creating build/bdist.linux-armv7l/wheel/mitos/mito 2024-04-29T17:46:16,110 copying build/lib/mitos/mito/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/mito 2024-04-29T17:46:16,114 creating build/bdist.linux-armv7l/wheel/mitos/sequence 2024-04-29T17:46:16,115 copying build/lib/mitos/sequence/degenerate.py -> build/bdist.linux-armv7l/wheel/mitos/sequence 2024-04-29T17:46:16,119 copying build/lib/mitos/sequence/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/sequence 2024-04-29T17:46:16,122 copying build/lib/mitos/merge_results.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T17:46:16,126 copying build/lib/mitos/mumcmp.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T17:46:16,130 copying build/lib/mitos/update-mitolog.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T17:46:16,135 copying build/lib/mitos/codoncount.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T17:46:16,142 creating build/bdist.linux-armv7l/wheel/mitos/protfeat 2024-04-29T17:46:16,144 copying build/lib/mitos/protfeat/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/protfeat 2024-04-29T17:46:16,149 creating build/bdist.linux-armv7l/wheel/mitos/gb 2024-04-29T17:46:16,150 copying build/lib/mitos/gb/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/gb 2024-04-29T17:46:16,154 copying build/lib/mitos/gb/unify.py -> build/bdist.linux-armv7l/wheel/mitos/gb 2024-04-29T17:46:16,157 creating build/bdist.linux-armv7l/wheel/mitos/trna 2024-04-29T17:46:16,158 copying build/lib/mitos/trna/arwenscan.py -> build/bdist.linux-armv7l/wheel/mitos/trna 2024-04-29T17:46:16,161 copying build/lib/mitos/trna/trnascan.py -> build/bdist.linux-armv7l/wheel/mitos/trna 2024-04-29T17:46:16,164 copying build/lib/mitos/trna/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/trna 2024-04-29T17:46:16,166 copying build/lib/mitos/removegene.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T17:46:16,168 copying build/lib/mitos/plotstst.R -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T17:46:16,171 creating build/bdist.linux-armv7l/wheel/mitos/extprog 2024-04-29T17:46:16,173 copying build/lib/mitos/extprog/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/extprog 2024-04-29T17:46:16,175 copying build/lib/mitos/names.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T17:46:16,177 creating build/bdist.linux-armv7l/wheel/mitos/feature 2024-04-29T17:46:16,178 copying build/lib/mitos/feature/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/feature 2024-04-29T17:46:16,183 copying build/lib/mitos/booreparser.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T17:46:16,186 copying build/lib/mitos/prepareFiles.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T17:46:16,189 creating build/bdist.linux-armv7l/wheel/mitos/update 2024-04-29T17:46:16,190 copying build/lib/mitos/update/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/update 2024-04-29T17:46:16,193 creating build/bdist.linux-armv7l/wheel/mitos/util 2024-04-29T17:46:16,194 copying build/lib/mitos/util/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/util 2024-04-29T17:46:16,197 creating build/bdist.linux-armv7l/wheel/mitos/bedfile 2024-04-29T17:46:16,198 copying build/lib/mitos/bedfile/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/bedfile 2024-04-29T17:46:16,200 copying build/lib/mitos/cmsearch_parse_separate.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T17:46:16,202 running install_egg_info 2024-04-29T17:46:16,236 Copying mitos.egg-info to build/bdist.linux-armv7l/wheel/mitos-2.1.9-py3.11.egg-info 2024-04-29T17:46:16,246 running install_scripts 2024-04-29T17:46:16,247 creating build/bdist.linux-armv7l/wheel/mitos-2.1.9.data 2024-04-29T17:46:16,248 creating build/bdist.linux-armv7l/wheel/mitos-2.1.9.data/scripts 2024-04-29T17:46:16,249 copying build/scripts-3.11/refseqsplit.py -> build/bdist.linux-armv7l/wheel/mitos-2.1.9.data/scripts 2024-04-29T17:46:16,251 copying build/scripts-3.11/plotrna.R -> build/bdist.linux-armv7l/wheel/mitos-2.1.9.data/scripts 2024-04-29T17:46:16,253 copying build/scripts-3.11/taxtree.py -> build/bdist.linux-armv7l/wheel/mitos-2.1.9.data/scripts 2024-04-29T17:46:16,255 copying build/scripts-3.11/plotprot.R -> build/bdist.linux-armv7l/wheel/mitos-2.1.9.data/scripts 2024-04-29T17:46:16,257 copying build/scripts-3.11/getinfo.py -> build/bdist.linux-armv7l/wheel/mitos-2.1.9.data/scripts 2024-04-29T17:46:16,259 copying build/scripts-3.11/drawmitos.py -> build/bdist.linux-armv7l/wheel/mitos-2.1.9.data/scripts 2024-04-29T17:46:16,261 copying build/scripts-3.11/getfeatures.py -> build/bdist.linux-armv7l/wheel/mitos-2.1.9.data/scripts 2024-04-29T17:46:16,263 copying build/scripts-3.11/analyse.py -> build/bdist.linux-armv7l/wheel/mitos-2.1.9.data/scripts 2024-04-29T17:46:16,265 copying build/scripts-3.11/gcpp.py -> build/bdist.linux-armv7l/wheel/mitos-2.1.9.data/scripts 2024-04-29T17:46:16,267 copying build/scripts-3.11/plotstst.R -> build/bdist.linux-armv7l/wheel/mitos-2.1.9.data/scripts 2024-04-29T17:46:16,269 copying build/scripts-3.11/update-blastdb.py -> build/bdist.linux-armv7l/wheel/mitos-2.1.9.data/scripts 2024-04-29T17:46:16,271 copying build/scripts-3.11/runmitos.py -> build/bdist.linux-armv7l/wheel/mitos-2.1.9.data/scripts 2024-04-29T17:46:16,274 copying build/scripts-3.11/geneorder.py -> build/bdist.linux-armv7l/wheel/mitos-2.1.9.data/scripts 2024-04-29T17:46:16,277 copying build/scripts-3.11/subseq.py -> build/bdist.linux-armv7l/wheel/mitos-2.1.9.data/scripts 2024-04-29T17:46:16,279 changing mode of build/bdist.linux-armv7l/wheel/mitos-2.1.9.data/scripts/refseqsplit.py to 755 2024-04-29T17:46:16,279 changing mode of build/bdist.linux-armv7l/wheel/mitos-2.1.9.data/scripts/plotrna.R to 755 2024-04-29T17:46:16,280 changing mode of build/bdist.linux-armv7l/wheel/mitos-2.1.9.data/scripts/taxtree.py to 755 2024-04-29T17:46:16,280 changing mode of build/bdist.linux-armv7l/wheel/mitos-2.1.9.data/scripts/plotprot.R to 755 2024-04-29T17:46:16,281 changing mode of build/bdist.linux-armv7l/wheel/mitos-2.1.9.data/scripts/getinfo.py to 755 2024-04-29T17:46:16,281 changing mode of build/bdist.linux-armv7l/wheel/mitos-2.1.9.data/scripts/drawmitos.py to 755 2024-04-29T17:46:16,282 changing mode of build/bdist.linux-armv7l/wheel/mitos-2.1.9.data/scripts/getfeatures.py to 755 2024-04-29T17:46:16,282 changing mode of build/bdist.linux-armv7l/wheel/mitos-2.1.9.data/scripts/analyse.py to 755 2024-04-29T17:46:16,283 changing mode of build/bdist.linux-armv7l/wheel/mitos-2.1.9.data/scripts/gcpp.py to 755 2024-04-29T17:46:16,283 changing mode of build/bdist.linux-armv7l/wheel/mitos-2.1.9.data/scripts/plotstst.R to 755 2024-04-29T17:46:16,284 changing mode of build/bdist.linux-armv7l/wheel/mitos-2.1.9.data/scripts/update-blastdb.py to 755 2024-04-29T17:46:16,284 changing mode of build/bdist.linux-armv7l/wheel/mitos-2.1.9.data/scripts/runmitos.py to 755 2024-04-29T17:46:16,285 changing mode of build/bdist.linux-armv7l/wheel/mitos-2.1.9.data/scripts/geneorder.py to 755 2024-04-29T17:46:16,285 changing mode of build/bdist.linux-armv7l/wheel/mitos-2.1.9.data/scripts/subseq.py to 755 2024-04-29T17:46:16,296 creating build/bdist.linux-armv7l/wheel/mitos-2.1.9.dist-info/WHEEL 2024-04-29T17:46:16,298 creating '/tmp/pip-wheel-p2k8on4a/mitos-2.1.9-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-04-29T17:46:16,301 adding 'mitos/CONFIG.py' 2024-04-29T17:46:16,302 adding 'mitos/__init__.py' 2024-04-29T17:46:16,304 adding 'mitos/booreparser.py' 2024-04-29T17:46:16,305 adding 'mitos/cmsearch_parse_separate.py' 2024-04-29T17:46:16,307 adding 'mitos/codoncount.py' 2024-04-29T17:46:16,310 adding 'mitos/convert_tree.py' 2024-04-29T17:46:16,312 adding 'mitos/create_prot_fasta.py' 2024-04-29T17:46:16,314 adding 'mitos/get-wancy.py' 2024-04-29T17:46:16,316 adding 'mitos/inihit.py' 2024-04-29T17:46:16,318 adding 'mitos/merge_results.py' 2024-04-29T17:46:16,323 adding 'mitos/mitoch_revisions.py' 2024-04-29T17:46:16,325 adding 'mitos/mitoloc.py' 2024-04-29T17:46:16,327 adding 'mitos/mitos-extension.py' 2024-04-29T17:46:16,330 adding 'mitos/mitos-extension2.py' 2024-04-29T17:46:16,331 adding 'mitos/mumcmp.py' 2024-04-29T17:46:16,333 adding 'mitos/names.py' 2024-04-29T17:46:16,334 adding 'mitos/ogre-geneorder.py' 2024-04-29T17:46:16,336 adding 'mitos/plotprot.R' 2024-04-29T17:46:16,337 adding 'mitos/plotrna.R' 2024-04-29T17:46:16,338 adding 'mitos/plotstst.R' 2024-04-29T17:46:16,340 adding 'mitos/prepareFiles.py' 2024-04-29T17:46:16,341 adding 'mitos/removegene.py' 2024-04-29T17:46:16,344 adding 'mitos/skew.py' 2024-04-29T17:46:16,360 adding 'mitos/trna-cm.py' 2024-04-29T17:46:16,364 adding 'mitos/trnadist.py' 2024-04-29T17:46:16,365 adding 'mitos/trnascan_parse_separate.py' 2024-04-29T17:46:16,367 adding 'mitos/update-mitolog.py' 2024-04-29T17:46:16,369 adding 'mitos/bedfile/__init__.py' 2024-04-29T17:46:16,380 adding 'mitos/blast/__init__.py' 2024-04-29T17:46:16,382 adding 'mitos/draw/__init__.py' 2024-04-29T17:46:16,384 adding 'mitos/extprog/__init__.py' 2024-04-29T17:46:16,390 adding 'mitos/feature/__init__.py' 2024-04-29T17:46:16,396 adding 'mitos/gb/__init__.py' 2024-04-29T17:46:16,398 adding 'mitos/gb/unify.py' 2024-04-29T17:46:16,400 adding 'mitos/gfffile/__init__.py' 2024-04-29T17:46:16,404 adding 'mitos/mergefeature/__init__.py' 2024-04-29T17:46:16,407 adding 'mitos/mitfi/__init__.py' 2024-04-29T17:46:16,409 adding 'mitos/mitfi/parser/improve_infernal_structure.jar' 2024-04-29T17:46:16,410 adding 'mitos/mitfi/parser/mitfiGeneticCodes' 2024-04-29T17:46:16,414 adding 'mitos/mitfi/parser/mitfi_import-1.1.jar' 2024-04-29T17:46:16,418 adding 'mitos/mitfi/parser/mitfi_import-1.1.jar.old' 2024-04-29T17:46:16,422 adding 'mitos/mitfi/parser/mitfi_import-1.1.jar.org' 2024-04-29T17:46:16,426 adding 'mitos/mitfi/parser/mitfi_import-1.1.jar.org.pre-circ' 2024-04-29T17:46:16,430 adding 'mitos/mitfi/parser/mitfi_import.jar' 2024-04-29T17:46:16,433 adding 'mitos/mito/__init__.py' 2024-04-29T17:46:16,434 adding 'mitos/mitofile/__init__.py' 2024-04-29T17:46:16,438 adding 'mitos/protfeat/__init__.py' 2024-04-29T17:46:16,440 adding 'mitos/rna/__init__.py' 2024-04-29T17:46:16,441 adding 'mitos/rna/forester.py' 2024-04-29T17:46:16,442 adding 'mitos/rna/vienna.py' 2024-04-29T17:46:16,445 adding 'mitos/sequence/__init__.py' 2024-04-29T17:46:16,446 adding 'mitos/sequence/degenerate.py' 2024-04-29T17:46:16,448 adding 'mitos/tax/__init__.py' 2024-04-29T17:46:16,450 adding 'mitos/tbl/__init__.py' 2024-04-29T17:46:16,452 adding 'mitos/trna/__init__.py' 2024-04-29T17:46:16,454 adding 'mitos/trna/arwenscan.py' 2024-04-29T17:46:16,456 adding 'mitos/trna/trnascan.py' 2024-04-29T17:46:16,459 adding 'mitos/update/__init__.py' 2024-04-29T17:46:16,461 adding 'mitos/util/__init__.py' 2024-04-29T17:46:16,463 adding 'mitos/webserver/__init__.py' 2024-04-29T17:46:16,467 adding 'mitos/webserver/help.txt' 2024-04-29T17:46:16,469 adding 'mitos/webserver/history.txt' 2024-04-29T17:46:16,470 adding 'mitos/webserver/index.txt' 2024-04-29T17:46:16,471 adding 'mitos/webserver/news.txt' 2024-04-29T17:46:16,473 adding 'mitos/webserver/upload.txt' 2024-04-29T17:46:16,474 adding 'mitos/webserver/wait.txt' 2024-04-29T17:46:16,478 adding 'mitos-2.1.9.data/scripts/analyse.py' 2024-04-29T17:46:16,479 adding 'mitos-2.1.9.data/scripts/drawmitos.py' 2024-04-29T17:46:16,481 adding 'mitos-2.1.9.data/scripts/gcpp.py' 2024-04-29T17:46:16,483 adding 'mitos-2.1.9.data/scripts/geneorder.py' 2024-04-29T17:46:16,485 adding 'mitos-2.1.9.data/scripts/getfeatures.py' 2024-04-29T17:46:16,486 adding 'mitos-2.1.9.data/scripts/getinfo.py' 2024-04-29T17:46:16,487 adding 'mitos-2.1.9.data/scripts/plotprot.R' 2024-04-29T17:46:16,489 adding 'mitos-2.1.9.data/scripts/plotrna.R' 2024-04-29T17:46:16,490 adding 'mitos-2.1.9.data/scripts/plotstst.R' 2024-04-29T17:46:16,491 adding 'mitos-2.1.9.data/scripts/refseqsplit.py' 2024-04-29T17:46:16,497 adding 'mitos-2.1.9.data/scripts/runmitos.py' 2024-04-29T17:46:16,499 adding 'mitos-2.1.9.data/scripts/subseq.py' 2024-04-29T17:46:16,500 adding 'mitos-2.1.9.data/scripts/taxtree.py' 2024-04-29T17:46:16,501 adding 'mitos-2.1.9.data/scripts/update-blastdb.py' 2024-04-29T17:46:16,503 adding 'mitos-2.1.9.dist-info/LICENSE' 2024-04-29T17:46:16,504 adding 'mitos-2.1.9.dist-info/METADATA' 2024-04-29T17:46:16,505 adding 'mitos-2.1.9.dist-info/WHEEL' 2024-04-29T17:46:16,506 adding 'mitos-2.1.9.dist-info/top_level.txt' 2024-04-29T17:46:16,508 adding 'mitos-2.1.9.dist-info/RECORD' 2024-04-29T17:46:16,517 removing build/bdist.linux-armv7l/wheel 2024-04-29T17:46:16,666 Building wheel for mitos (setup.py): finished with status 'done' 2024-04-29T17:46:16,672 Created wheel for mitos: filename=mitos-2.1.9-py3-none-any.whl size=332288 sha256=e5d75a123fa627980133ca8296c9494293ac8d03bd90ae88aaccaf0d894202f2 2024-04-29T17:46:16,673 Stored in directory: /tmp/pip-ephem-wheel-cache-0m_f295g/wheels/70/4f/58/fe816dd066cdeed6d247fa8d67dd0c3a921d4836684d415dc2 2024-04-29T17:46:16,685 Successfully built mitos 2024-04-29T17:46:16,705 Removed build tracker: '/tmp/pip-build-tracker-dxdn0cz4'