2024-04-29T18:39:52,687 Created temporary directory: /tmp/pip-build-tracker-12w_yja1 2024-04-29T18:39:52,688 Initialized build tracking at /tmp/pip-build-tracker-12w_yja1 2024-04-29T18:39:52,689 Created build tracker: /tmp/pip-build-tracker-12w_yja1 2024-04-29T18:39:52,689 Entered build tracker: /tmp/pip-build-tracker-12w_yja1 2024-04-29T18:39:52,690 Created temporary directory: /tmp/pip-wheel-mg_5pz5l 2024-04-29T18:39:52,693 Created temporary directory: /tmp/pip-ephem-wheel-cache-e5zrsjco 2024-04-29T18:39:52,715 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-04-29T18:39:52,718 2 location(s) to search for versions of mitos: 2024-04-29T18:39:52,718 * https://pypi.org/simple/mitos/ 2024-04-29T18:39:52,718 * https://www.piwheels.org/simple/mitos/ 2024-04-29T18:39:52,719 Fetching project page and analyzing links: https://pypi.org/simple/mitos/ 2024-04-29T18:39:52,720 Getting page https://pypi.org/simple/mitos/ 2024-04-29T18:39:52,721 Found index url https://pypi.org/simple/ 2024-04-29T18:39:52,861 Fetched page https://pypi.org/simple/mitos/ as application/vnd.pypi.simple.v1+json 2024-04-29T18:39:52,868 Skipping link: No binaries permitted for mitos: https://files.pythonhosted.org/packages/ae/2d/5f1e66a046e59cf6088f44d4a02cae66d498e226365af5fd42e2d660a814/mitos-1.0-py2-none-any.whl (from https://pypi.org/simple/mitos/) 2024-04-29T18:39:52,869 Found link https://files.pythonhosted.org/packages/c5/6e/e1aae4079b0ebbce64897f54f5cd4a3953a0cb741026d16e14e7ae272a48/mitos-1.0.tar.gz (from https://pypi.org/simple/mitos/), version: 1.0 2024-04-29T18:39:52,870 Found link https://files.pythonhosted.org/packages/d7/19/816780e09ecc6a783f146d80bcde73eb7940d074f4feea137ec954bfd437/mitos-1.0.1.tar.gz (from https://pypi.org/simple/mitos/), version: 1.0.1 2024-04-29T18:39:52,870 Found link https://files.pythonhosted.org/packages/38/c7/3dd90bcf0d61c69226ef1632baa3ad0e96d798de36053b4b56ed7660dfdb/mitos-1.0.2.tar.gz (from https://pypi.org/simple/mitos/), version: 1.0.2 2024-04-29T18:39:52,871 Found link https://files.pythonhosted.org/packages/e2/d4/864af2605cc1f45cc78cfed740bbdfba1da59ea9a42c24ef5077c9218501/mitos-1.0.3.tar.gz (from https://pypi.org/simple/mitos/), version: 1.0.3 2024-04-29T18:39:52,872 Found link https://files.pythonhosted.org/packages/8d/32/1aa5eb88f964c3cf5441622648cc4ae30f115db32bdd5dc5bf194a3c112c/mitos-1.0.4.tar.gz (from https://pypi.org/simple/mitos/), version: 1.0.4 2024-04-29T18:39:52,872 Found link https://files.pythonhosted.org/packages/ff/49/f4c711126604aa86abeeda44378786a0903bc53970acf4afa5feb68f72b8/mitos-1.0.5.tar.gz (from https://pypi.org/simple/mitos/), version: 1.0.5 2024-04-29T18:39:52,873 Skipping link: No binaries permitted for mitos: https://files.pythonhosted.org/packages/c3/cd/96e0e1ad1551b8fff56ab89e61231809494dec3ee80f51117b4f5d432452/mitos-1.1.0-py3-none-any.whl (from https://pypi.org/simple/mitos/) 2024-04-29T18:39:52,874 Found link https://files.pythonhosted.org/packages/ce/33/46fd40fd9f4c11f5bf296c2c092f59e36dee233d71a0f032b34c2a64c7ba/mitos-1.1.0.tar.gz (from https://pypi.org/simple/mitos/), version: 1.1.0 2024-04-29T18:39:52,875 Found link https://files.pythonhosted.org/packages/b3/a0/5268d8fec841240195c19e704b552a8b3060768c6710c67c67350ea60f13/mitos-1.1.1.tar.gz (from https://pypi.org/simple/mitos/), version: 1.1.1 2024-04-29T18:39:52,875 Found link https://files.pythonhosted.org/packages/7c/38/4431d42c178a65b3710531867f10ae50c5a49408ccab6c058af277e83e5d/mitos-1.1.2.tar.gz (from https://pypi.org/simple/mitos/), version: 1.1.2 2024-04-29T18:39:52,876 Found link https://files.pythonhosted.org/packages/76/40/e0db56e8dfc65a2a13c8f613c4b5839247b918a1cd5d83b384a6c957928e/mitos-1.1.3.tar.gz (from https://pypi.org/simple/mitos/), version: 1.1.3 2024-04-29T18:39:52,877 Found link https://files.pythonhosted.org/packages/fc/39/368668a4250e85f2a596f996a4067528a2e13ad69d18404d4dac5ca4118f/mitos-1.1.4.tar.gz (from https://pypi.org/simple/mitos/), version: 1.1.4 2024-04-29T18:39:52,878 Found link https://files.pythonhosted.org/packages/aa/6d/1bb441bdbf6da2df6d00bafbcc3bcdca90a5ca20c4c66af513b54741a841/mitos-1.1.5.tar.gz (from https://pypi.org/simple/mitos/), version: 1.1.5 2024-04-29T18:39:52,878 Found link https://files.pythonhosted.org/packages/3a/fa/7f7ad2bc263f9006f3ac6d65bc0644dcff4f36be038e2848d819b55f963e/mitos-1.1.6.tar.gz (from https://pypi.org/simple/mitos/), version: 1.1.6 2024-04-29T18:39:52,879 Found link https://files.pythonhosted.org/packages/cc/3d/33ede707ade9301aeca542cd6e2240eda20d02e0d3fbe1a2f025b5c8f5ea/mitos-1.1.7.tar.gz (from https://pypi.org/simple/mitos/), version: 1.1.7 2024-04-29T18:39:52,880 Found link https://files.pythonhosted.org/packages/f3/fa/7e2b9cef0d99e7792077a4c1116dc9bbe4c085e7b89ea79b74474c00b2b1/mitos-2.0.1.tar.gz (from https://pypi.org/simple/mitos/), version: 2.0.1 2024-04-29T18:39:52,880 Found link https://files.pythonhosted.org/packages/d7/53/5d215fe8689055dd329a27202f9dc7f66e23548f3d2ad3fa55d98dc56988/mitos-2.0.2.tar.gz (from https://pypi.org/simple/mitos/), version: 2.0.2 2024-04-29T18:39:52,881 Found link https://files.pythonhosted.org/packages/cd/97/a8bf95d5e26b51071d9f342dc475891425b223b6add347a6dbf9412937f1/mitos-2.0.3.tar.gz (from https://pypi.org/simple/mitos/), version: 2.0.3 2024-04-29T18:39:52,882 Found link https://files.pythonhosted.org/packages/39/9f/6cdac19a8d50915e2e5285b447077459af9c6524f980ded6657dc205593d/mitos-2.0.4.tar.gz (from https://pypi.org/simple/mitos/), version: 2.0.4 2024-04-29T18:39:52,882 Found link https://files.pythonhosted.org/packages/d0/16/8040a37887377e3992b0874ab441af54e16030fd23eb844bbf5293597c99/mitos-2.0.5.tar.gz (from https://pypi.org/simple/mitos/), version: 2.0.5 2024-04-29T18:39:52,883 Found link https://files.pythonhosted.org/packages/40/ef/5a93579c1ebc63ca8fe71cfe541bca389a0f9410b9a2c1ceff148f83af79/mitos-2.0.6.tar.gz (from https://pypi.org/simple/mitos/), version: 2.0.6 2024-04-29T18:39:52,884 Found link https://files.pythonhosted.org/packages/1f/a2/32eb96227aae3a719794cc922d839b8c38ee5c315087bf095792c48f996d/mitos-2.0.7.tar.gz (from https://pypi.org/simple/mitos/), version: 2.0.7 2024-04-29T18:39:52,884 Found link https://files.pythonhosted.org/packages/d5/7f/b3e5c5c83352beb13677186899379de3c50a2222dc8faac16632f600d4b6/mitos-2.0.8.tar.gz (from https://pypi.org/simple/mitos/), version: 2.0.8 2024-04-29T18:39:52,885 Skipping link: No binaries permitted for mitos: https://files.pythonhosted.org/packages/9d/93/5f2a1097bfa507acbf7dd6ac677f6df14df61692cccb42d28c34edb7ca5b/mitos-2.1.0-py3-none-any.whl (from https://pypi.org/simple/mitos/) 2024-04-29T18:39:52,886 Found link https://files.pythonhosted.org/packages/f8/f4/2950dea175f0bda896b88ac2ac13007a1d007252a583ddd328b176fb54a5/mitos-2.1.0.tar.gz (from https://pypi.org/simple/mitos/), version: 2.1.0 2024-04-29T18:39:52,886 Found link https://files.pythonhosted.org/packages/57/78/2fde036a6c767aa5fb8c1102526af749ee13ad426b295289265c548384f9/mitos-2.1.1.tar.gz (from https://pypi.org/simple/mitos/), version: 2.1.1 2024-04-29T18:39:52,887 Found link https://files.pythonhosted.org/packages/74/63/f90f359df86c01e68f5c678eef30d929b9311e7bb80f16071a1532515a0a/mitos-2.1.2.tar.gz (from https://pypi.org/simple/mitos/), version: 2.1.2 2024-04-29T18:39:52,888 Found link https://files.pythonhosted.org/packages/d6/1f/b6dbc4704555e91e3efa3184fc90b04e901dc6e787c37091d445dd50bd4b/mitos-2.1.3.tar.gz (from https://pypi.org/simple/mitos/), version: 2.1.3 2024-04-29T18:39:52,889 Found link https://files.pythonhosted.org/packages/ff/1f/af7beaaaa133f2f55cdbfbf5430c0e9a3102b101dd0a8d2c6f22376af56b/mitos-2.1.4.tar.gz (from https://pypi.org/simple/mitos/), version: 2.1.4 2024-04-29T18:39:52,889 Found link https://files.pythonhosted.org/packages/c9/6d/853d05a3ec8c81c73bb23ba0862ded05aa4c2fdc74cdc796c982c6896476/mitos-2.1.5.tar.gz (from https://pypi.org/simple/mitos/), version: 2.1.5 2024-04-29T18:39:52,890 Found link https://files.pythonhosted.org/packages/96/9a/97d5e59e6680b450e24d0c3313f112b8818f7d2f6c6fbc90d685cf7fe47c/mitos-2.1.6.tar.gz (from https://pypi.org/simple/mitos/), version: 2.1.6 2024-04-29T18:39:52,891 Found link https://files.pythonhosted.org/packages/ae/13/4befcffdab2028eaed3986939d74736846d66cde1d2c66a464d03a70c860/mitos-2.1.7.tar.gz (from https://pypi.org/simple/mitos/), version: 2.1.7 2024-04-29T18:39:52,891 Found link https://files.pythonhosted.org/packages/2d/87/fa237a6183642f2470b3dfe1273f0dd2a64fd46480cd1c2bc41b05233a63/mitos-2.1.8.tar.gz (from https://pypi.org/simple/mitos/), version: 2.1.8 2024-04-29T18:39:52,892 Found link https://files.pythonhosted.org/packages/5a/8a/d85bd8431046111dc7b8709d9b14bb5fc5cf6eb4ae7ed9cc898e91173983/mitos-2.1.9.tar.gz (from https://pypi.org/simple/mitos/), version: 2.1.9 2024-04-29T18:39:52,893 Fetching project page and analyzing links: https://www.piwheels.org/simple/mitos/ 2024-04-29T18:39:52,894 Getting page https://www.piwheels.org/simple/mitos/ 2024-04-29T18:39:52,895 Found index url https://www.piwheels.org/simple/ 2024-04-29T18:39:53,380 Fetched page https://www.piwheels.org/simple/mitos/ as text/html 2024-04-29T18:39:53,388 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.1.9-py3-none-any.whl#sha256=e5d75a123fa627980133ca8296c9494293ac8d03bd90ae88aaccaf0d894202f2 (from https://www.piwheels.org/simple/mitos/) 2024-04-29T18:39:53,389 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.1.8-py3-none-any.whl#sha256=c68c4708043cf10b33dd71b30ee207ed4d3923e12ca21421cdf8c98b1cb64451 (from https://www.piwheels.org/simple/mitos/) 2024-04-29T18:39:53,390 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.1.7-py3-none-any.whl#sha256=d4ac25651e00beb38a546bef9ff493efdfedc7dc904f673b5b079bb056214850 (from https://www.piwheels.org/simple/mitos/) 2024-04-29T18:39:53,391 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.1.6-py3-none-any.whl#sha256=bed8aeda4eebf1ce891081ec67cf34897f2e5da8800cfb51c78593616a3304ea (from https://www.piwheels.org/simple/mitos/) 2024-04-29T18:39:53,391 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.1.5-py3-none-any.whl#sha256=c404e62da7a2d919a7cf0999ba3ce479541d935e38999ed75c09dc9a38f6b6bd (from https://www.piwheels.org/simple/mitos/) 2024-04-29T18:39:53,392 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.1.4-py3-none-any.whl#sha256=249c87e42350fbefa1e3281d0e81f795c7710a95303b226bdc818b51615162e0 (from https://www.piwheels.org/simple/mitos/) 2024-04-29T18:39:53,392 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.1.3-py3-none-any.whl#sha256=dd19f4a9b02b695465d7d7861d7f611d1c73f231e6205b881d1617cd733bdd87 (from https://www.piwheels.org/simple/mitos/) 2024-04-29T18:39:53,393 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.1.2-py3-none-any.whl#sha256=c98234624cb7939861858030fbac10b88073159ea24b334b42e1cfd70254088d (from https://www.piwheels.org/simple/mitos/) 2024-04-29T18:39:53,393 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.1.1-py3-none-any.whl#sha256=698670abccda0918af0b490888cb195f86172e217766c9672bfedae33666ac82 (from https://www.piwheels.org/simple/mitos/) 2024-04-29T18:39:53,394 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.1.0-py3-none-any.whl#sha256=d4b006045b98620155cbed38de6ecf0d0ffb030cebc4d6e6e947cb015b8ce746 (from https://www.piwheels.org/simple/mitos/) 2024-04-29T18:39:53,394 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.0.8-py3-none-any.whl#sha256=5e88aa49c5bba746d511e0e619295e3c59916c71ba94246f984e44dcfef6a06c (from https://www.piwheels.org/simple/mitos/) 2024-04-29T18:39:53,395 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.0.7-py3-none-any.whl#sha256=97e98856e946735f44b3df83d67645e0dac8b411edb7774df74c00a44832e1d6 (from https://www.piwheels.org/simple/mitos/) 2024-04-29T18:39:53,396 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.0.6-py3-none-any.whl#sha256=8fba2e7cf9c22c6a728a1f8141764a77a6a4a27d7f7e50106b6e43832857b149 (from https://www.piwheels.org/simple/mitos/) 2024-04-29T18:39:53,396 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.0.5-py3-none-any.whl#sha256=ed4998969ebae7bf1688b78cdac8f19ca359f123ea79c2acd2654dd454a53f22 (from https://www.piwheels.org/simple/mitos/) 2024-04-29T18:39:53,397 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.0.4-py3-none-any.whl#sha256=71ac10ffdc0a236d68e4fd82a700ae35a92f0b23a09242c8b99485ccbadb10cc (from https://www.piwheels.org/simple/mitos/) 2024-04-29T18:39:53,397 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.0.3-py3-none-any.whl#sha256=4da7d3530901e0732adc63ab4afa0c5d9a40558469b2ccee71ea4fbad466603b (from https://www.piwheels.org/simple/mitos/) 2024-04-29T18:39:53,398 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.0.2-py3-none-any.whl#sha256=0cd775b72e2dca4acf2f9c6f4d591abaeb00b983e4882fcf536d934a8263d342 (from https://www.piwheels.org/simple/mitos/) 2024-04-29T18:39:53,398 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-2.0.1-py3-none-any.whl#sha256=307713427f698c0f3449d782d86287f1494fd2ff773a9fc407fbd29a0de53aed (from https://www.piwheels.org/simple/mitos/) 2024-04-29T18:39:53,399 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-1.1.6-py3-none-any.whl#sha256=cb01f66c23f24077fc8a306d97131924859e293c06f97411730d7c8d75f4bf1a (from https://www.piwheels.org/simple/mitos/) 2024-04-29T18:39:53,399 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-1.1.5-py3-none-any.whl#sha256=ae7a240619a3688130de5e6be1d0c3ee8dbcfaf3aab6f5f193d8485e02dc29df (from https://www.piwheels.org/simple/mitos/) 2024-04-29T18:39:53,400 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-1.1.4-py3-none-any.whl#sha256=94e72cf1eb3cbbe067f3996d78d50a7fe9e91350bbd146f7babf90321ecb9ffc (from https://www.piwheels.org/simple/mitos/) 2024-04-29T18:39:53,400 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-1.1.3-py3-none-any.whl#sha256=92bec0ea93c83f4d494767e69401c1dcc1dd8f562917c3d110ec0a525d142a6a (from https://www.piwheels.org/simple/mitos/) 2024-04-29T18:39:53,401 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-1.1.2-py3-none-any.whl#sha256=b237b128b553848c12c5d387b10a20bbcb734b8672b3bf56fb2f3995e169c03d (from https://www.piwheels.org/simple/mitos/) 2024-04-29T18:39:53,402 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-1.1.1-py3-none-any.whl#sha256=f0970e0e530a2a7759daafc81f1c79460dc85d15c1f34551d8394dce187dfe1c (from https://www.piwheels.org/simple/mitos/) 2024-04-29T18:39:53,403 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-1.1.0-py3-none-any.whl#sha256=424b5172258baf2837d8a45e89224c12fdc3cc2a8f4ba0894e5c74111e754e5d (from https://www.piwheels.org/simple/mitos/) 2024-04-29T18:39:53,403 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-1.0.5-py3-none-any.whl#sha256=f27a041efc520420cbffbb63a6c428a2ace092d6ffdc47942d6b9c434a281629 (from https://www.piwheels.org/simple/mitos/) 2024-04-29T18:39:53,405 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-1.0.4-py3-none-any.whl#sha256=4c35b6595c7a62189502f6becaed4b2fe147f7ed6c6ee8d6b69fb4fda5e2139a (from https://www.piwheels.org/simple/mitos/) 2024-04-29T18:39:53,405 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-1.0.3-py3-none-any.whl#sha256=7b62f2fcef8414d2a429f2f3c033e85c9377805612113e7103fa6793aa083cbc (from https://www.piwheels.org/simple/mitos/) 2024-04-29T18:39:53,406 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-1.0.2-py3-none-any.whl#sha256=ba6a5f7a1d3a0a95106d401e13f7639c5ed2ecb367ab7899e2204b14aa9930a1 (from https://www.piwheels.org/simple/mitos/) 2024-04-29T18:39:53,408 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-1.0.1-py3-none-any.whl#sha256=d216729f10eb3463d947658451c8f70fd97a9b2ca94cea55221f7a50f85749e2 (from https://www.piwheels.org/simple/mitos/) 2024-04-29T18:39:53,408 Skipping link: No binaries permitted for mitos: https://www.piwheels.org/simple/mitos/mitos-1.0-py3-none-any.whl#sha256=4f914c63f700f85163b395353782bcb87e49392f63c151f387dd4514694d0ac1 (from https://www.piwheels.org/simple/mitos/) 2024-04-29T18:39:53,409 Skipping link: not a file: https://www.piwheels.org/simple/mitos/ 2024-04-29T18:39:53,409 Skipping link: not a file: https://pypi.org/simple/mitos/ 2024-04-29T18:39:53,431 Given no hashes to check 1 links for project 'mitos': discarding no candidates 2024-04-29T18:39:53,449 Collecting mitos==1.1.7 2024-04-29T18:39:53,451 Created temporary directory: /tmp/pip-unpack-_lonfhaf 2024-04-29T18:39:53,668 Downloading mitos-1.1.7.tar.gz (240 kB) 2024-04-29T18:39:54,033 Added mitos==1.1.7 from https://files.pythonhosted.org/packages/cc/3d/33ede707ade9301aeca542cd6e2240eda20d02e0d3fbe1a2f025b5c8f5ea/mitos-1.1.7.tar.gz to build tracker '/tmp/pip-build-tracker-12w_yja1' 2024-04-29T18:39:54,035 Running setup.py (path:/tmp/pip-wheel-mg_5pz5l/mitos_2a66c5fb0d0a4acd9693bb752323e923/setup.py) egg_info for package mitos 2024-04-29T18:39:54,036 Created temporary directory: /tmp/pip-pip-egg-info-_kujt0za 2024-04-29T18:39:54,037 Preparing metadata (setup.py): started 2024-04-29T18:39:54,038 Running command python setup.py egg_info 2024-04-29T18:39:55,183 running egg_info 2024-04-29T18:39:55,184 creating /tmp/pip-pip-egg-info-_kujt0za/mitos.egg-info 2024-04-29T18:39:55,210 writing /tmp/pip-pip-egg-info-_kujt0za/mitos.egg-info/PKG-INFO 2024-04-29T18:39:55,213 writing dependency_links to /tmp/pip-pip-egg-info-_kujt0za/mitos.egg-info/dependency_links.txt 2024-04-29T18:39:55,215 writing requirements to /tmp/pip-pip-egg-info-_kujt0za/mitos.egg-info/requires.txt 2024-04-29T18:39:55,216 writing top-level names to /tmp/pip-pip-egg-info-_kujt0za/mitos.egg-info/top_level.txt 2024-04-29T18:39:55,218 writing manifest file '/tmp/pip-pip-egg-info-_kujt0za/mitos.egg-info/SOURCES.txt' 2024-04-29T18:39:55,345 reading manifest file '/tmp/pip-pip-egg-info-_kujt0za/mitos.egg-info/SOURCES.txt' 2024-04-29T18:39:55,346 reading manifest template 'MANIFEST.in' 2024-04-29T18:39:55,348 adding license file 'LICENSE' 2024-04-29T18:39:55,352 writing manifest file '/tmp/pip-pip-egg-info-_kujt0za/mitos.egg-info/SOURCES.txt' 2024-04-29T18:39:55,470 Preparing metadata (setup.py): finished with status 'done' 2024-04-29T18:39:55,474 Source in /tmp/pip-wheel-mg_5pz5l/mitos_2a66c5fb0d0a4acd9693bb752323e923 has version 1.1.7, which satisfies requirement mitos==1.1.7 from https://files.pythonhosted.org/packages/cc/3d/33ede707ade9301aeca542cd6e2240eda20d02e0d3fbe1a2f025b5c8f5ea/mitos-1.1.7.tar.gz 2024-04-29T18:39:55,475 Removed mitos==1.1.7 from https://files.pythonhosted.org/packages/cc/3d/33ede707ade9301aeca542cd6e2240eda20d02e0d3fbe1a2f025b5c8f5ea/mitos-1.1.7.tar.gz from build tracker '/tmp/pip-build-tracker-12w_yja1' 2024-04-29T18:39:55,479 Created temporary directory: /tmp/pip-unpack-tgob32q1 2024-04-29T18:39:55,480 Created temporary directory: /tmp/pip-unpack-d6qgjz5r 2024-04-29T18:39:55,485 Building wheels for collected packages: mitos 2024-04-29T18:39:55,489 Created temporary directory: /tmp/pip-wheel-c8nyojgt 2024-04-29T18:39:55,489 Building wheel for mitos (setup.py): started 2024-04-29T18:39:55,491 Destination directory: /tmp/pip-wheel-c8nyojgt 2024-04-29T18:39:55,491 Running command python setup.py bdist_wheel 2024-04-29T18:39:56,564 running bdist_wheel 2024-04-29T18:39:56,663 running build 2024-04-29T18:39:56,664 running build_py 2024-04-29T18:39:56,691 creating build 2024-04-29T18:39:56,692 creating build/lib 2024-04-29T18:39:56,692 creating build/lib/mitos 2024-04-29T18:39:56,694 copying mitos/trna-cm.py -> build/lib/mitos 2024-04-29T18:39:56,700 copying mitos/create_prot_fasta.py -> build/lib/mitos 2024-04-29T18:39:56,703 copying mitos/mitos-extension2.py -> build/lib/mitos 2024-04-29T18:39:56,705 copying mitos/skew.py -> build/lib/mitos 2024-04-29T18:39:56,707 copying mitos/convert_tree.py -> build/lib/mitos 2024-04-29T18:39:56,710 copying mitos/ogre-geneorder.py -> build/lib/mitos 2024-04-29T18:39:56,711 copying mitos/mitoloc.py -> build/lib/mitos 2024-04-29T18:39:56,713 copying mitos/mitoch_revisions.py -> build/lib/mitos 2024-04-29T18:39:56,717 copying mitos/mitos-extension.py -> build/lib/mitos 2024-04-29T18:39:56,719 copying mitos/inihit.py -> build/lib/mitos 2024-04-29T18:39:56,721 copying mitos/__init__.py -> build/lib/mitos 2024-04-29T18:39:56,723 copying mitos/CONFIG.py -> build/lib/mitos 2024-04-29T18:39:56,724 copying mitos/trnadist.py -> build/lib/mitos 2024-04-29T18:39:56,727 copying mitos/update-mitolog.py -> build/lib/mitos 2024-04-29T18:39:56,729 copying mitos/removegene.py -> build/lib/mitos 2024-04-29T18:39:56,731 copying mitos/booreparser.py -> build/lib/mitos 2024-04-29T18:39:56,733 copying mitos/prepareFiles.py -> build/lib/mitos 2024-04-29T18:39:56,735 copying mitos/update-blastdb.py -> build/lib/mitos 2024-04-29T18:39:56,738 creating build/lib/mitos/mitfi 2024-04-29T18:39:56,738 copying mitos/mitfi/__init__.py -> build/lib/mitos/mitfi 2024-04-29T18:39:56,742 creating build/lib/mitos/codon 2024-04-29T18:39:56,743 copying mitos/codon/__init__.py -> build/lib/mitos/codon 2024-04-29T18:39:56,747 creating build/lib/mitos/mitofile 2024-04-29T18:39:56,747 copying mitos/mitofile/__init__.py -> build/lib/mitos/mitofile 2024-04-29T18:39:56,750 creating build/lib/mitos/webserver 2024-04-29T18:39:56,751 copying mitos/webserver/__init__.py -> build/lib/mitos/webserver 2024-04-29T18:39:56,754 creating build/lib/mitos/blast 2024-04-29T18:39:56,756 copying mitos/blast/__init__.py -> build/lib/mitos/blast 2024-04-29T18:39:56,761 creating build/lib/mitos/tax 2024-04-29T18:39:56,763 copying mitos/tax/__init__.py -> build/lib/mitos/tax 2024-04-29T18:39:56,767 creating build/lib/mitos/draw 2024-04-29T18:39:56,768 copying mitos/draw/__init__.py -> build/lib/mitos/draw 2024-04-29T18:39:56,771 creating build/lib/mitos/rna 2024-04-29T18:39:56,772 copying mitos/rna/vienna.py -> build/lib/mitos/rna 2024-04-29T18:39:56,774 copying mitos/rna/forester.py -> build/lib/mitos/rna 2024-04-29T18:39:56,776 copying mitos/rna/__init__.py -> build/lib/mitos/rna 2024-04-29T18:39:56,778 creating build/lib/mitos/mergefeature 2024-04-29T18:39:56,779 copying mitos/mergefeature/__init__.py -> build/lib/mitos/mergefeature 2024-04-29T18:39:56,783 creating build/lib/mitos/tbl 2024-04-29T18:39:56,784 copying mitos/tbl/__init__.py -> build/lib/mitos/tbl 2024-04-29T18:39:56,786 creating build/lib/mitos/gfffile 2024-04-29T18:39:56,787 copying mitos/gfffile/__init__.py -> build/lib/mitos/gfffile 2024-04-29T18:39:56,789 creating build/lib/mitos/mito 2024-04-29T18:39:56,790 copying mitos/mito/__init__.py -> build/lib/mitos/mito 2024-04-29T18:39:56,793 creating build/lib/mitos/sequence 2024-04-29T18:39:56,794 copying mitos/sequence/degenerate.py -> build/lib/mitos/sequence 2024-04-29T18:39:56,796 copying mitos/sequence/__init__.py -> build/lib/mitos/sequence 2024-04-29T18:39:56,799 creating build/lib/mitos/gb 2024-04-29T18:39:56,800 copying mitos/gb/__init__.py -> build/lib/mitos/gb 2024-04-29T18:39:56,803 copying mitos/gb/unify.py -> build/lib/mitos/gb 2024-04-29T18:39:56,806 creating build/lib/mitos/trna 2024-04-29T18:39:56,808 copying mitos/trna/arwenscan.py -> build/lib/mitos/trna 2024-04-29T18:39:56,815 copying mitos/trna/trnascan.py -> build/lib/mitos/trna 2024-04-29T18:39:56,817 copying mitos/trna/__init__.py -> build/lib/mitos/trna 2024-04-29T18:39:56,819 creating build/lib/mitos/extprog 2024-04-29T18:39:56,820 copying mitos/extprog/__init__.py -> build/lib/mitos/extprog 2024-04-29T18:39:56,822 creating build/lib/mitos/feature 2024-04-29T18:39:56,823 copying mitos/feature/__init__.py -> build/lib/mitos/feature 2024-04-29T18:39:56,827 creating build/lib/mitos/update 2024-04-29T18:39:56,827 copying mitos/update/__init__.py -> build/lib/mitos/update 2024-04-29T18:39:56,831 creating build/lib/mitos/util 2024-04-29T18:39:56,832 copying mitos/util/__init__.py -> build/lib/mitos/util 2024-04-29T18:39:56,834 creating build/lib/mitos/bedfile 2024-04-29T18:39:56,835 copying mitos/bedfile/__init__.py -> build/lib/mitos/bedfile 2024-04-29T18:39:56,837 running egg_info 2024-04-29T18:39:56,895 writing mitos.egg-info/PKG-INFO 2024-04-29T18:39:56,898 writing dependency_links to mitos.egg-info/dependency_links.txt 2024-04-29T18:39:56,899 writing requirements to mitos.egg-info/requires.txt 2024-04-29T18:39:56,900 writing top-level names to mitos.egg-info/top_level.txt 2024-04-29T18:39:56,942 reading manifest file 'mitos.egg-info/SOURCES.txt' 2024-04-29T18:39:56,945 reading manifest template 'MANIFEST.in' 2024-04-29T18:39:56,947 adding license file 'LICENSE' 2024-04-29T18:39:56,951 writing manifest file 'mitos.egg-info/SOURCES.txt' 2024-04-29T18:39:56,954 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'mitos.codons' is absent from the `packages` configuration. 2024-04-29T18:39:56,955 !! 2024-04-29T18:39:56,956 ******************************************************************************** 2024-04-29T18:39:56,956 ############################ 2024-04-29T18:39:56,957 # Package would be ignored # 2024-04-29T18:39:56,957 ############################ 2024-04-29T18:39:56,958 Python recognizes 'mitos.codons' as an importable package[^1], 2024-04-29T18:39:56,958 but it is absent from setuptools' `packages` configuration. 2024-04-29T18:39:56,959 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-29T18:39:56,960 package, please make sure that 'mitos.codons' is explicitly added 2024-04-29T18:39:56,960 to the `packages` configuration field. 2024-04-29T18:39:56,961 Alternatively, you can also rely on setuptools' discovery methods 2024-04-29T18:39:56,962 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-29T18:39:56,962 instead of `find_packages(...)`/`find:`). 2024-04-29T18:39:56,963 You can read more about "package discovery" on setuptools documentation page: 2024-04-29T18:39:56,965 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-29T18:39:56,966 If you don't want 'mitos.codons' to be distributed and are 2024-04-29T18:39:56,966 already explicitly excluding 'mitos.codons' via 2024-04-29T18:39:56,967 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-29T18:39:56,967 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-29T18:39:56,968 combination with a more fine grained `package-data` configuration. 2024-04-29T18:39:56,969 You can read more about "package data files" on setuptools documentation page: 2024-04-29T18:39:56,970 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-29T18:39:56,971 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-29T18:39:56,972 even if it does not contain any `.py` files. 2024-04-29T18:39:56,973 On the other hand, currently there is no concept of package data 2024-04-29T18:39:56,973 directory, all directories are treated like packages. 2024-04-29T18:39:56,974 ******************************************************************************** 2024-04-29T18:39:56,975 !! 2024-04-29T18:39:56,975 check.warn(importable) 2024-04-29T18:39:56,976 /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'mitos.mitfi.parser' is absent from the `packages` configuration. 2024-04-29T18:39:56,977 !! 2024-04-29T18:39:56,978 ******************************************************************************** 2024-04-29T18:39:56,978 ############################ 2024-04-29T18:39:56,979 # Package would be ignored # 2024-04-29T18:39:56,979 ############################ 2024-04-29T18:39:56,980 Python recognizes 'mitos.mitfi.parser' as an importable package[^1], 2024-04-29T18:39:56,980 but it is absent from setuptools' `packages` configuration. 2024-04-29T18:39:56,981 This leads to an ambiguous overall configuration. If you want to distribute this 2024-04-29T18:39:56,982 package, please make sure that 'mitos.mitfi.parser' is explicitly added 2024-04-29T18:39:56,982 to the `packages` configuration field. 2024-04-29T18:39:56,983 Alternatively, you can also rely on setuptools' discovery methods 2024-04-29T18:39:56,984 (for example by using `find_namespace_packages(...)`/`find_namespace:` 2024-04-29T18:39:56,984 instead of `find_packages(...)`/`find:`). 2024-04-29T18:39:56,985 You can read more about "package discovery" on setuptools documentation page: 2024-04-29T18:39:56,986 - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html 2024-04-29T18:39:56,987 If you don't want 'mitos.mitfi.parser' to be distributed and are 2024-04-29T18:39:56,988 already explicitly excluding 'mitos.mitfi.parser' via 2024-04-29T18:39:56,988 `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, 2024-04-29T18:39:56,989 you can try to use `exclude_package_data`, or `include-package-data=False` in 2024-04-29T18:39:56,989 combination with a more fine grained `package-data` configuration. 2024-04-29T18:39:56,990 You can read more about "package data files" on setuptools documentation page: 2024-04-29T18:39:56,991 - https://setuptools.pypa.io/en/latest/userguide/datafiles.html 2024-04-29T18:39:56,993 [^1]: For Python, any directory (with suitable naming) can be imported, 2024-04-29T18:39:56,993 even if it does not contain any `.py` files. 2024-04-29T18:39:56,994 On the other hand, currently there is no concept of package data 2024-04-29T18:39:56,994 directory, all directories are treated like packages. 2024-04-29T18:39:56,995 ******************************************************************************** 2024-04-29T18:39:56,996 !! 2024-04-29T18:39:56,996 check.warn(importable) 2024-04-29T18:39:56,997 copying mitos/plotprot.R -> build/lib/mitos 2024-04-29T18:39:56,997 copying mitos/plotrna.R -> build/lib/mitos 2024-04-29T18:39:56,998 creating build/lib/mitos/codons 2024-04-29T18:39:56,998 copying mitos/codons/gc.prt -> build/lib/mitos/codons 2024-04-29T18:39:56,999 creating build/lib/mitos/mitfi/parser 2024-04-29T18:39:56,999 copying mitos/mitfi/parser/improve_infernal_structure.jar -> build/lib/mitos/mitfi/parser 2024-04-29T18:39:57,000 copying mitos/mitfi/parser/mitfiGeneticCodes -> build/lib/mitos/mitfi/parser 2024-04-29T18:39:57,001 copying mitos/mitfi/parser/mitfi_import-1.1.jar -> build/lib/mitos/mitfi/parser 2024-04-29T18:39:57,001 copying mitos/mitfi/parser/mitfi_import.jar -> build/lib/mitos/mitfi/parser 2024-04-29T18:39:57,002 copying mitos/webserver/DB_index.txt -> build/lib/mitos/webserver 2024-04-29T18:39:57,002 copying mitos/webserver/DB_search.txt -> build/lib/mitos/webserver 2024-04-29T18:39:57,003 copying mitos/webserver/help.txt -> build/lib/mitos/webserver 2024-04-29T18:39:57,008 copying mitos/webserver/history.txt -> build/lib/mitos/webserver 2024-04-29T18:39:57,010 copying mitos/webserver/index.txt -> build/lib/mitos/webserver 2024-04-29T18:39:57,012 copying mitos/webserver/news.txt -> build/lib/mitos/webserver 2024-04-29T18:39:57,015 copying mitos/webserver/upload.txt -> build/lib/mitos/webserver 2024-04-29T18:39:57,017 copying mitos/webserver/wait.txt -> build/lib/mitos/webserver 2024-04-29T18:39:57,025 running build_scripts 2024-04-29T18:39:57,026 creating build/scripts-3.11 2024-04-29T18:39:57,027 copying and adjusting runmitos.py -> build/scripts-3.11 2024-04-29T18:39:57,029 copying and adjusting drawmitos.py -> build/scripts-3.11 2024-04-29T18:39:57,031 copying analyse.py -> build/scripts-3.11 2024-04-29T18:39:57,034 copying gcpp.py -> build/scripts-3.11 2024-04-29T18:39:57,036 copying and adjusting geneorder.py -> build/scripts-3.11 2024-04-29T18:39:57,038 copying and adjusting getfeatures.py -> build/scripts-3.11 2024-04-29T18:39:57,040 copying and adjusting getinfo.py -> build/scripts-3.11 2024-04-29T18:39:57,041 copying and adjusting refseqsplit.py -> build/scripts-3.11 2024-04-29T18:39:57,043 copying and adjusting subseq.py -> build/scripts-3.11 2024-04-29T18:39:57,045 copying and adjusting taxtree.py -> build/scripts-3.11 2024-04-29T18:39:57,047 copying mitos/plotprot.R -> build/scripts-3.11 2024-04-29T18:39:57,049 copying mitos/plotrna.R -> build/scripts-3.11 2024-04-29T18:39:57,051 changing mode of build/scripts-3.11/runmitos.py from 644 to 755 2024-04-29T18:39:57,051 changing mode of build/scripts-3.11/drawmitos.py from 644 to 755 2024-04-29T18:39:57,052 changing mode of build/scripts-3.11/analyse.py from 644 to 755 2024-04-29T18:39:57,052 changing mode of build/scripts-3.11/gcpp.py from 644 to 755 2024-04-29T18:39:57,053 changing mode of build/scripts-3.11/geneorder.py from 644 to 755 2024-04-29T18:39:57,053 changing mode of build/scripts-3.11/getfeatures.py from 644 to 755 2024-04-29T18:39:57,054 changing mode of build/scripts-3.11/getinfo.py from 644 to 755 2024-04-29T18:39:57,054 changing mode of build/scripts-3.11/refseqsplit.py from 644 to 755 2024-04-29T18:39:57,055 changing mode of build/scripts-3.11/subseq.py from 644 to 755 2024-04-29T18:39:57,055 changing mode of build/scripts-3.11/taxtree.py from 644 to 755 2024-04-29T18:39:57,081 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-04-29T18:39:57,081 !! 2024-04-29T18:39:57,082 ******************************************************************************** 2024-04-29T18:39:57,083 Please avoid running ``setup.py`` directly. 2024-04-29T18:39:57,084 Instead, use pypa/build, pypa/installer or other 2024-04-29T18:39:57,084 standards-based tools. 2024-04-29T18:39:57,085 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-04-29T18:39:57,086 ******************************************************************************** 2024-04-29T18:39:57,087 !! 2024-04-29T18:39:57,087 self.initialize_options() 2024-04-29T18:39:57,107 installing to build/bdist.linux-armv7l/wheel 2024-04-29T18:39:57,107 running install 2024-04-29T18:39:57,131 running install_lib 2024-04-29T18:39:57,155 creating build/bdist.linux-armv7l 2024-04-29T18:39:57,156 creating build/bdist.linux-armv7l/wheel 2024-04-29T18:39:57,158 creating build/bdist.linux-armv7l/wheel/mitos 2024-04-29T18:39:57,159 copying build/lib/mitos/trna-cm.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T18:39:57,170 copying build/lib/mitos/create_prot_fasta.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T18:39:57,178 creating build/bdist.linux-armv7l/wheel/mitos/mitfi 2024-04-29T18:39:57,180 copying build/lib/mitos/mitfi/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/mitfi 2024-04-29T18:39:57,183 creating build/bdist.linux-armv7l/wheel/mitos/mitfi/parser 2024-04-29T18:39:57,184 copying build/lib/mitos/mitfi/parser/mitfiGeneticCodes -> build/bdist.linux-armv7l/wheel/mitos/mitfi/parser 2024-04-29T18:39:57,186 copying build/lib/mitos/mitfi/parser/mitfi_import-1.1.jar -> build/bdist.linux-armv7l/wheel/mitos/mitfi/parser 2024-04-29T18:39:57,189 copying build/lib/mitos/mitfi/parser/improve_infernal_structure.jar -> build/bdist.linux-armv7l/wheel/mitos/mitfi/parser 2024-04-29T18:39:57,191 copying build/lib/mitos/mitfi/parser/mitfi_import.jar -> build/bdist.linux-armv7l/wheel/mitos/mitfi/parser 2024-04-29T18:39:57,195 creating build/bdist.linux-armv7l/wheel/mitos/codon 2024-04-29T18:39:57,195 copying build/lib/mitos/codon/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/codon 2024-04-29T18:39:57,198 creating build/bdist.linux-armv7l/wheel/mitos/mitofile 2024-04-29T18:39:57,199 copying build/lib/mitos/mitofile/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/mitofile 2024-04-29T18:39:57,200 copying build/lib/mitos/mitos-extension2.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T18:39:57,203 copying build/lib/mitos/skew.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T18:39:57,205 copying build/lib/mitos/convert_tree.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T18:39:57,208 creating build/bdist.linux-armv7l/wheel/mitos/webserver 2024-04-29T18:39:57,209 copying build/lib/mitos/webserver/news.txt -> build/bdist.linux-armv7l/wheel/mitos/webserver 2024-04-29T18:39:57,211 copying build/lib/mitos/webserver/help.txt -> build/bdist.linux-armv7l/wheel/mitos/webserver 2024-04-29T18:39:57,217 copying build/lib/mitos/webserver/history.txt -> build/bdist.linux-armv7l/wheel/mitos/webserver 2024-04-29T18:39:57,219 copying build/lib/mitos/webserver/wait.txt -> build/bdist.linux-armv7l/wheel/mitos/webserver 2024-04-29T18:39:57,221 copying build/lib/mitos/webserver/DB_index.txt -> build/bdist.linux-armv7l/wheel/mitos/webserver 2024-04-29T18:39:57,223 copying build/lib/mitos/webserver/index.txt -> build/bdist.linux-armv7l/wheel/mitos/webserver 2024-04-29T18:39:57,225 copying build/lib/mitos/webserver/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/webserver 2024-04-29T18:39:57,228 copying build/lib/mitos/webserver/upload.txt -> build/bdist.linux-armv7l/wheel/mitos/webserver 2024-04-29T18:39:57,229 copying build/lib/mitos/webserver/DB_search.txt -> build/bdist.linux-armv7l/wheel/mitos/webserver 2024-04-29T18:39:57,231 copying build/lib/mitos/ogre-geneorder.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T18:39:57,233 creating build/bdist.linux-armv7l/wheel/mitos/blast 2024-04-29T18:39:57,234 copying build/lib/mitos/blast/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/blast 2024-04-29T18:39:57,237 copying build/lib/mitos/plotrna.R -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T18:39:57,239 copying build/lib/mitos/mitoloc.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T18:39:57,241 copying build/lib/mitos/mitoch_revisions.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T18:39:57,245 creating build/bdist.linux-armv7l/wheel/mitos/tax 2024-04-29T18:39:57,246 copying build/lib/mitos/tax/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/tax 2024-04-29T18:39:57,248 copying build/lib/mitos/plotprot.R -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T18:39:57,250 creating build/bdist.linux-armv7l/wheel/mitos/draw 2024-04-29T18:39:57,251 copying build/lib/mitos/draw/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/draw 2024-04-29T18:39:57,254 creating build/bdist.linux-armv7l/wheel/mitos/rna 2024-04-29T18:39:57,255 copying build/lib/mitos/rna/vienna.py -> build/bdist.linux-armv7l/wheel/mitos/rna 2024-04-29T18:39:57,257 copying build/lib/mitos/rna/forester.py -> build/bdist.linux-armv7l/wheel/mitos/rna 2024-04-29T18:39:57,259 copying build/lib/mitos/rna/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/rna 2024-04-29T18:39:57,261 copying build/lib/mitos/mitos-extension.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T18:39:57,263 creating build/bdist.linux-armv7l/wheel/mitos/mergefeature 2024-04-29T18:39:57,264 copying build/lib/mitos/mergefeature/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/mergefeature 2024-04-29T18:39:57,267 copying build/lib/mitos/inihit.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T18:39:57,270 creating build/bdist.linux-armv7l/wheel/mitos/tbl 2024-04-29T18:39:57,271 copying build/lib/mitos/tbl/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/tbl 2024-04-29T18:39:57,273 creating build/bdist.linux-armv7l/wheel/mitos/codons 2024-04-29T18:39:57,274 copying build/lib/mitos/codons/gc.prt -> build/bdist.linux-armv7l/wheel/mitos/codons 2024-04-29T18:39:57,277 copying build/lib/mitos/__init__.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T18:39:57,278 copying build/lib/mitos/CONFIG.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T18:39:57,281 creating build/bdist.linux-armv7l/wheel/mitos/gfffile 2024-04-29T18:39:57,282 copying build/lib/mitos/gfffile/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/gfffile 2024-04-29T18:39:57,283 copying build/lib/mitos/trnadist.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T18:39:57,287 creating build/bdist.linux-armv7l/wheel/mitos/mito 2024-04-29T18:39:57,287 copying build/lib/mitos/mito/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/mito 2024-04-29T18:39:57,290 creating build/bdist.linux-armv7l/wheel/mitos/sequence 2024-04-29T18:39:57,290 copying build/lib/mitos/sequence/degenerate.py -> build/bdist.linux-armv7l/wheel/mitos/sequence 2024-04-29T18:39:57,292 copying build/lib/mitos/sequence/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/sequence 2024-04-29T18:39:57,295 copying build/lib/mitos/update-mitolog.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T18:39:57,297 creating build/bdist.linux-armv7l/wheel/mitos/gb 2024-04-29T18:39:57,298 copying build/lib/mitos/gb/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/gb 2024-04-29T18:39:57,301 copying build/lib/mitos/gb/unify.py -> build/bdist.linux-armv7l/wheel/mitos/gb 2024-04-29T18:39:57,304 creating build/bdist.linux-armv7l/wheel/mitos/trna 2024-04-29T18:39:57,305 copying build/lib/mitos/trna/arwenscan.py -> build/bdist.linux-armv7l/wheel/mitos/trna 2024-04-29T18:39:57,307 copying build/lib/mitos/trna/trnascan.py -> build/bdist.linux-armv7l/wheel/mitos/trna 2024-04-29T18:39:57,309 copying build/lib/mitos/trna/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/trna 2024-04-29T18:39:57,311 copying build/lib/mitos/removegene.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T18:39:57,313 creating build/bdist.linux-armv7l/wheel/mitos/extprog 2024-04-29T18:39:57,314 copying build/lib/mitos/extprog/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/extprog 2024-04-29T18:39:57,317 creating build/bdist.linux-armv7l/wheel/mitos/feature 2024-04-29T18:39:57,318 copying build/lib/mitos/feature/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/feature 2024-04-29T18:39:57,321 copying build/lib/mitos/booreparser.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T18:39:57,323 copying build/lib/mitos/prepareFiles.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T18:39:57,325 copying build/lib/mitos/update-blastdb.py -> build/bdist.linux-armv7l/wheel/mitos 2024-04-29T18:39:57,327 creating build/bdist.linux-armv7l/wheel/mitos/update 2024-04-29T18:39:57,328 copying build/lib/mitos/update/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/update 2024-04-29T18:39:57,331 creating build/bdist.linux-armv7l/wheel/mitos/util 2024-04-29T18:39:57,332 copying build/lib/mitos/util/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/util 2024-04-29T18:39:57,334 creating build/bdist.linux-armv7l/wheel/mitos/bedfile 2024-04-29T18:39:57,335 copying build/lib/mitos/bedfile/__init__.py -> build/bdist.linux-armv7l/wheel/mitos/bedfile 2024-04-29T18:39:57,337 running install_egg_info 2024-04-29T18:39:57,369 Copying mitos.egg-info to build/bdist.linux-armv7l/wheel/mitos-1.1.7-py3.11.egg-info 2024-04-29T18:39:57,378 running install_scripts 2024-04-29T18:39:57,379 creating build/bdist.linux-armv7l/wheel/mitos-1.1.7.data 2024-04-29T18:39:57,380 creating build/bdist.linux-armv7l/wheel/mitos-1.1.7.data/scripts 2024-04-29T18:39:57,381 copying build/scripts-3.11/refseqsplit.py -> build/bdist.linux-armv7l/wheel/mitos-1.1.7.data/scripts 2024-04-29T18:39:57,383 copying build/scripts-3.11/plotrna.R -> build/bdist.linux-armv7l/wheel/mitos-1.1.7.data/scripts 2024-04-29T18:39:57,385 copying build/scripts-3.11/taxtree.py -> build/bdist.linux-armv7l/wheel/mitos-1.1.7.data/scripts 2024-04-29T18:39:57,387 copying build/scripts-3.11/plotprot.R -> build/bdist.linux-armv7l/wheel/mitos-1.1.7.data/scripts 2024-04-29T18:39:57,389 copying build/scripts-3.11/getinfo.py -> build/bdist.linux-armv7l/wheel/mitos-1.1.7.data/scripts 2024-04-29T18:39:57,391 copying build/scripts-3.11/drawmitos.py -> build/bdist.linux-armv7l/wheel/mitos-1.1.7.data/scripts 2024-04-29T18:39:57,393 copying build/scripts-3.11/getfeatures.py -> build/bdist.linux-armv7l/wheel/mitos-1.1.7.data/scripts 2024-04-29T18:39:57,395 copying build/scripts-3.11/analyse.py -> build/bdist.linux-armv7l/wheel/mitos-1.1.7.data/scripts 2024-04-29T18:39:57,397 copying build/scripts-3.11/gcpp.py -> build/bdist.linux-armv7l/wheel/mitos-1.1.7.data/scripts 2024-04-29T18:39:57,399 copying build/scripts-3.11/runmitos.py -> build/bdist.linux-armv7l/wheel/mitos-1.1.7.data/scripts 2024-04-29T18:39:57,402 copying build/scripts-3.11/geneorder.py -> build/bdist.linux-armv7l/wheel/mitos-1.1.7.data/scripts 2024-04-29T18:39:57,406 copying build/scripts-3.11/subseq.py -> build/bdist.linux-armv7l/wheel/mitos-1.1.7.data/scripts 2024-04-29T18:39:57,408 changing mode of build/bdist.linux-armv7l/wheel/mitos-1.1.7.data/scripts/refseqsplit.py to 755 2024-04-29T18:39:57,409 changing mode of build/bdist.linux-armv7l/wheel/mitos-1.1.7.data/scripts/plotrna.R to 755 2024-04-29T18:39:57,409 changing mode of build/bdist.linux-armv7l/wheel/mitos-1.1.7.data/scripts/taxtree.py to 755 2024-04-29T18:39:57,410 changing mode of build/bdist.linux-armv7l/wheel/mitos-1.1.7.data/scripts/plotprot.R to 755 2024-04-29T18:39:57,410 changing mode of build/bdist.linux-armv7l/wheel/mitos-1.1.7.data/scripts/getinfo.py to 755 2024-04-29T18:39:57,411 changing mode of build/bdist.linux-armv7l/wheel/mitos-1.1.7.data/scripts/drawmitos.py to 755 2024-04-29T18:39:57,411 changing mode of build/bdist.linux-armv7l/wheel/mitos-1.1.7.data/scripts/getfeatures.py to 755 2024-04-29T18:39:57,412 changing mode of build/bdist.linux-armv7l/wheel/mitos-1.1.7.data/scripts/analyse.py to 755 2024-04-29T18:39:57,412 changing mode of build/bdist.linux-armv7l/wheel/mitos-1.1.7.data/scripts/gcpp.py to 755 2024-04-29T18:39:57,413 changing mode of build/bdist.linux-armv7l/wheel/mitos-1.1.7.data/scripts/runmitos.py to 755 2024-04-29T18:39:57,413 changing mode of build/bdist.linux-armv7l/wheel/mitos-1.1.7.data/scripts/geneorder.py to 755 2024-04-29T18:39:57,414 changing mode of build/bdist.linux-armv7l/wheel/mitos-1.1.7.data/scripts/subseq.py to 755 2024-04-29T18:39:57,425 creating build/bdist.linux-armv7l/wheel/mitos-1.1.7.dist-info/WHEEL 2024-04-29T18:39:57,428 creating '/tmp/pip-wheel-c8nyojgt/mitos-1.1.7-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-04-29T18:39:57,431 adding 'mitos/CONFIG.py' 2024-04-29T18:39:57,432 adding 'mitos/__init__.py' 2024-04-29T18:39:57,434 adding 'mitos/booreparser.py' 2024-04-29T18:39:57,438 adding 'mitos/convert_tree.py' 2024-04-29T18:39:57,440 adding 'mitos/create_prot_fasta.py' 2024-04-29T18:39:57,442 adding 'mitos/inihit.py' 2024-04-29T18:39:57,447 adding 'mitos/mitoch_revisions.py' 2024-04-29T18:39:57,449 adding 'mitos/mitoloc.py' 2024-04-29T18:39:57,452 adding 'mitos/mitos-extension.py' 2024-04-29T18:39:57,454 adding 'mitos/mitos-extension2.py' 2024-04-29T18:39:57,456 adding 'mitos/ogre-geneorder.py' 2024-04-29T18:39:57,457 adding 'mitos/plotprot.R' 2024-04-29T18:39:57,458 adding 'mitos/plotrna.R' 2024-04-29T18:39:57,460 adding 'mitos/prepareFiles.py' 2024-04-29T18:39:57,461 adding 'mitos/removegene.py' 2024-04-29T18:39:57,464 adding 'mitos/skew.py' 2024-04-29T18:39:57,479 adding 'mitos/trna-cm.py' 2024-04-29T18:39:57,483 adding 'mitos/trnadist.py' 2024-04-29T18:39:57,484 adding 'mitos/update-blastdb.py' 2024-04-29T18:39:57,486 adding 'mitos/update-mitolog.py' 2024-04-29T18:39:57,488 adding 'mitos/bedfile/__init__.py' 2024-04-29T18:39:57,493 adding 'mitos/blast/__init__.py' 2024-04-29T18:39:57,495 adding 'mitos/codon/__init__.py' 2024-04-29T18:39:57,497 adding 'mitos/codons/gc.prt' 2024-04-29T18:39:57,498 adding 'mitos/draw/__init__.py' 2024-04-29T18:39:57,500 adding 'mitos/extprog/__init__.py' 2024-04-29T18:39:57,504 adding 'mitos/feature/__init__.py' 2024-04-29T18:39:57,508 adding 'mitos/gb/__init__.py' 2024-04-29T18:39:57,510 adding 'mitos/gb/unify.py' 2024-04-29T18:39:57,511 adding 'mitos/gfffile/__init__.py' 2024-04-29T18:39:57,515 adding 'mitos/mergefeature/__init__.py' 2024-04-29T18:39:57,517 adding 'mitos/mitfi/__init__.py' 2024-04-29T18:39:57,519 adding 'mitos/mitfi/parser/improve_infernal_structure.jar' 2024-04-29T18:39:57,521 adding 'mitos/mitfi/parser/mitfiGeneticCodes' 2024-04-29T18:39:57,525 adding 'mitos/mitfi/parser/mitfi_import-1.1.jar' 2024-04-29T18:39:57,528 adding 'mitos/mitfi/parser/mitfi_import.jar' 2024-04-29T18:39:57,530 adding 'mitos/mito/__init__.py' 2024-04-29T18:39:57,532 adding 'mitos/mitofile/__init__.py' 2024-04-29T18:39:57,534 adding 'mitos/rna/__init__.py' 2024-04-29T18:39:57,535 adding 'mitos/rna/forester.py' 2024-04-29T18:39:57,536 adding 'mitos/rna/vienna.py' 2024-04-29T18:39:57,539 adding 'mitos/sequence/__init__.py' 2024-04-29T18:39:57,540 adding 'mitos/sequence/degenerate.py' 2024-04-29T18:39:57,541 adding 'mitos/tax/__init__.py' 2024-04-29T18:39:57,543 adding 'mitos/tbl/__init__.py' 2024-04-29T18:39:57,545 adding 'mitos/trna/__init__.py' 2024-04-29T18:39:57,547 adding 'mitos/trna/arwenscan.py' 2024-04-29T18:39:57,549 adding 'mitos/trna/trnascan.py' 2024-04-29T18:39:57,551 adding 'mitos/update/__init__.py' 2024-04-29T18:39:57,553 adding 'mitos/util/__init__.py' 2024-04-29T18:39:57,555 adding 'mitos/webserver/DB_index.txt' 2024-04-29T18:39:57,556 adding 'mitos/webserver/DB_search.txt' 2024-04-29T18:39:57,558 adding 'mitos/webserver/__init__.py' 2024-04-29T18:39:57,581 adding 'mitos/webserver/help.txt' 2024-04-29T18:39:57,583 adding 'mitos/webserver/history.txt' 2024-04-29T18:39:57,585 adding 'mitos/webserver/index.txt' 2024-04-29T18:39:57,586 adding 'mitos/webserver/news.txt' 2024-04-29T18:39:57,588 adding 'mitos/webserver/upload.txt' 2024-04-29T18:39:57,589 adding 'mitos/webserver/wait.txt' 2024-04-29T18:39:57,592 adding 'mitos-1.1.7.data/scripts/analyse.py' 2024-04-29T18:39:57,593 adding 'mitos-1.1.7.data/scripts/drawmitos.py' 2024-04-29T18:39:57,595 adding 'mitos-1.1.7.data/scripts/gcpp.py' 2024-04-29T18:39:57,597 adding 'mitos-1.1.7.data/scripts/geneorder.py' 2024-04-29T18:39:57,599 adding 'mitos-1.1.7.data/scripts/getfeatures.py' 2024-04-29T18:39:57,600 adding 'mitos-1.1.7.data/scripts/getinfo.py' 2024-04-29T18:39:57,603 adding 'mitos-1.1.7.data/scripts/plotprot.R' 2024-04-29T18:39:57,609 adding 'mitos-1.1.7.data/scripts/plotrna.R' 2024-04-29T18:39:57,614 adding 'mitos-1.1.7.data/scripts/refseqsplit.py' 2024-04-29T18:39:57,620 adding 'mitos-1.1.7.data/scripts/runmitos.py' 2024-04-29T18:39:57,622 adding 'mitos-1.1.7.data/scripts/subseq.py' 2024-04-29T18:39:57,623 adding 'mitos-1.1.7.data/scripts/taxtree.py' 2024-04-29T18:39:57,625 adding 'mitos-1.1.7.dist-info/LICENSE' 2024-04-29T18:39:57,627 adding 'mitos-1.1.7.dist-info/METADATA' 2024-04-29T18:39:57,628 adding 'mitos-1.1.7.dist-info/WHEEL' 2024-04-29T18:39:57,629 adding 'mitos-1.1.7.dist-info/top_level.txt' 2024-04-29T18:39:57,630 adding 'mitos-1.1.7.dist-info/RECORD' 2024-04-29T18:39:57,644 removing build/bdist.linux-armv7l/wheel 2024-04-29T18:39:57,795 Building wheel for mitos (setup.py): finished with status 'done' 2024-04-29T18:39:57,801 Created wheel for mitos: filename=mitos-1.1.7-py3-none-any.whl size=275688 sha256=78a76a0206bf8679dcd0cb6ad93aceb5307180d1cd8af030abefeb4a392fefd0 2024-04-29T18:39:57,802 Stored in directory: /tmp/pip-ephem-wheel-cache-e5zrsjco/wheels/9a/59/ad/74b3c98a58dce6c847a5898c9c2be5b9bc2ae624bf481a1a0a 2024-04-29T18:39:57,815 Successfully built mitos 2024-04-29T18:39:57,826 Removed build tracker: '/tmp/pip-build-tracker-12w_yja1'