2024-04-30T00:10:51,945 Created temporary directory: /tmp/pip-build-tracker-3v9v74j7 2024-04-30T00:10:51,946 Initialized build tracking at /tmp/pip-build-tracker-3v9v74j7 2024-04-30T00:10:51,947 Created build tracker: /tmp/pip-build-tracker-3v9v74j7 2024-04-30T00:10:51,947 Entered build tracker: /tmp/pip-build-tracker-3v9v74j7 2024-04-30T00:10:51,948 Created temporary directory: /tmp/pip-wheel-raf7z45c 2024-04-30T00:10:51,951 Created temporary directory: /tmp/pip-ephem-wheel-cache-zanis2wd 2024-04-30T00:10:51,973 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-04-30T00:10:51,977 2 location(s) to search for versions of auto-qchem: 2024-04-30T00:10:51,977 * https://pypi.org/simple/auto-qchem/ 2024-04-30T00:10:51,977 * https://www.piwheels.org/simple/auto-qchem/ 2024-04-30T00:10:51,977 Fetching project page and analyzing links: https://pypi.org/simple/auto-qchem/ 2024-04-30T00:10:51,978 Getting page https://pypi.org/simple/auto-qchem/ 2024-04-30T00:10:51,980 Found index url https://pypi.org/simple/ 2024-04-30T00:10:52,193 Fetched page https://pypi.org/simple/auto-qchem/ as application/vnd.pypi.simple.v1+json 2024-04-30T00:10:52,199 Skipping link: unsupported archive format: .egg: https://files.pythonhosted.org/packages/2d/b0/0cef3aca3442fcc17c899e8a583c711eea04722812355bd6a78c8508609a/auto_qchem-0.1-py3.7.egg (from https://pypi.org/simple/auto-qchem/) 2024-04-30T00:10:52,199 Skipping link: No binaries permitted for auto-qchem: https://files.pythonhosted.org/packages/fc/1f/973e322b70b1dc076dde578db10bb9d23dc48bbc6c716b166a44ec5b91ba/auto_qchem-0.1.1-py3-none-any.whl (from https://pypi.org/simple/auto-qchem/) (requires-python:>3.8.0) 2024-04-30T00:10:52,200 Found link https://files.pythonhosted.org/packages/0d/23/e17728ceb899946dd3bf73d08d2a24e318878450b65473da1b0e263d04db/auto-qchem-1.2.0.tar.gz (from https://pypi.org/simple/auto-qchem/), version: 1.2.0 2024-04-30T00:10:52,200 Skipping link: No binaries permitted for auto-qchem: https://files.pythonhosted.org/packages/40/fb/218481a970603ea68c85030732a791dc825d32f62265c5b09d742d161a34/auto_qchem-1.2.0-py3-none-any.whl (from https://pypi.org/simple/auto-qchem/) 2024-04-30T00:10:52,201 Skipping link: No binaries permitted for auto-qchem: https://files.pythonhosted.org/packages/9e/92/d755f0bc6d035dfd1576ae84eed471f62ca3f19722f8fc83a07e17a14fea/auto_qchem-1.2.1-py3-none-any.whl (from https://pypi.org/simple/auto-qchem/) 2024-04-30T00:10:52,202 Skipping link: No binaries permitted for auto-qchem: https://files.pythonhosted.org/packages/6d/9e/e4a7efd0907a0ec773927f4ce8d77c75bd15c4abac3abce944877116670c/auto_qchem-1.2.2-py3-none-any.whl (from https://pypi.org/simple/auto-qchem/) 2024-04-30T00:10:52,202 Skipping link: No binaries permitted for auto-qchem: https://files.pythonhosted.org/packages/ed/af/1aa7534006fc7ef322524ed3e5110729b322ec55c285c8670e58a55c33d9/auto_qchem-1.2.3-py3-none-any.whl (from https://pypi.org/simple/auto-qchem/) 2024-04-30T00:10:52,203 Skipping link: No binaries permitted for auto-qchem: https://files.pythonhosted.org/packages/7a/e7/43ba71581bc2e2ea7822888dc8a01ffa420a4802e9ca4929fbb839774b33/auto_qchem-1.2.4-py3-none-any.whl (from https://pypi.org/simple/auto-qchem/) 2024-04-30T00:10:52,204 Skipping link: No binaries permitted for auto-qchem: https://files.pythonhosted.org/packages/1c/fc/e80ba1019cd2273fc50d866359e828e92d411b0b6387da8bd9584e826a42/auto_qchem-1.2.5-py3-none-any.whl (from https://pypi.org/simple/auto-qchem/) 2024-04-30T00:10:52,204 Found link https://files.pythonhosted.org/packages/fe/01/32326a12dc360412c5c1b7f14e2ae2e5431cd13880cadff22df83cb09617/auto-qchem-1.2.6.tar.gz (from https://pypi.org/simple/auto-qchem/), version: 1.2.6 2024-04-30T00:10:52,205 Skipping link: No binaries permitted for auto-qchem: https://files.pythonhosted.org/packages/f8/aa/44b1df54503fb37f212fc5a1b7c810fb064a01e22911c834de7afa8496f4/auto_qchem-1.2.6-py3-none-any.whl (from 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2024-04-30T00:10:52,211 Skipping link: No binaries permitted for auto-qchem: https://files.pythonhosted.org/packages/7f/70/157eaf298eabf2dfc22713d8b7c58057fcdc2837c0fb7b6fd2c024c38aae/auto_qchem-1.3.3-py3-none-any.whl (from https://pypi.org/simple/auto-qchem/) (requires-python:>=3.8) 2024-04-30T00:10:52,212 Found link https://files.pythonhosted.org/packages/63/fc/745b07a34ffe04ab62a9105f3fe44ef3ca8a039e23dc71a15a28f6774962/auto-qchem-1.3.4.tar.gz (from https://pypi.org/simple/auto-qchem/) (requires-python:>=3.8), version: 1.3.4 2024-04-30T00:10:52,213 Skipping link: No binaries permitted for auto-qchem: https://files.pythonhosted.org/packages/45/30/033fb5c331bdaead1f8926a5b5782050d70335e91e2cc9fd424d3189deaf/auto_qchem-1.3.4-py3-none-any.whl (from https://pypi.org/simple/auto-qchem/) (requires-python:>=3.8) 2024-04-30T00:10:52,214 Found link https://files.pythonhosted.org/packages/db/06/e5a3965f106f9610314c92ff08127f01c023e66c8f27eb7afd179402cb57/auto-qchem-1.3.5.tar.gz (from https://pypi.org/simple/auto-qchem/) (requires-python:>=3.8), version: 1.3.5 2024-04-30T00:10:52,214 Skipping link: No binaries permitted for auto-qchem: https://files.pythonhosted.org/packages/f4/d7/b7b85165e3dae2051feaa771fae7a2222e383b2dec4678ab6c5bbc1862a5/auto_qchem-1.3.5-py3-none-any.whl (from https://pypi.org/simple/auto-qchem/) (requires-python:>=3.8) 2024-04-30T00:10:52,216 Found link https://files.pythonhosted.org/packages/c3/d2/75ed9f97222b4dc9b108e9ea6107927dd00875a1ac7f51be6e372eb48430/auto-qchem-1.3.6.tar.gz (from https://pypi.org/simple/auto-qchem/) (requires-python:>=3.8), version: 1.3.6 2024-04-30T00:10:52,217 Found link https://files.pythonhosted.org/packages/5d/e3/119507ff0fd803eedeb9093fd520108f457248f63ea54eed42b374fe50c6/auto-qchem-1.3.7.tar.gz (from https://pypi.org/simple/auto-qchem/) (requires-python:>=3.8), version: 1.3.7 2024-04-30T00:10:52,217 Found link https://files.pythonhosted.org/packages/8c/fd/c2893ff68b17efef3e89866496651328c9f3135ecbd943c57992c618be3f/auto-qchem-1.3.8.tar.gz (from https://pypi.org/simple/auto-qchem/) (requires-python:>=3.8), version: 1.3.8 2024-04-30T00:10:52,218 Found link https://files.pythonhosted.org/packages/5f/ad/7fd26af66c0d0832a8252f93767c98a4857ac47d81f9628290c8db7e03c3/auto-qchem-1.3.9.tar.gz (from https://pypi.org/simple/auto-qchem/) (requires-python:>=3.8), version: 1.3.9 2024-04-30T00:10:52,219 Fetching project page and analyzing links: https://www.piwheels.org/simple/auto-qchem/ 2024-04-30T00:10:52,220 Getting page https://www.piwheels.org/simple/auto-qchem/ 2024-04-30T00:10:52,222 Found index url https://www.piwheels.org/simple/ 2024-04-30T00:10:52,500 Fetched page https://www.piwheels.org/simple/auto-qchem/ as text/html 2024-04-30T00:10:52,506 Skipping link: No binaries permitted for auto-qchem: https://www.piwheels.org/simple/auto-qchem/auto_qchem-1.3.8-py3-none-any.whl#sha256=18590aaec4697282bbccfe108c65af5b985335f1ae31a763346959ee05662c50 (from https://www.piwheels.org/simple/auto-qchem/) (requires-python:>=3.8) 2024-04-30T00:10:52,506 Skipping link: No binaries permitted for auto-qchem: https://www.piwheels.org/simple/auto-qchem/auto_qchem-1.3.7-py3-none-any.whl#sha256=f064c6a2911ca42e7da777c7ee17125243acfc03d76fe33154a8d75ca324dfbe (from https://www.piwheels.org/simple/auto-qchem/) (requires-python:>=3.8) 2024-04-30T00:10:52,507 Skipping link: No binaries permitted for auto-qchem: https://www.piwheels.org/simple/auto-qchem/auto_qchem-1.3.6-py3-none-any.whl#sha256=7380c8e352c76abba634f3878a1fe72dce60fb1cbfd7d2eae1af9640721a58a8 (from https://www.piwheels.org/simple/auto-qchem/) (requires-python:>=3.8) 2024-04-30T00:10:52,508 Skipping link: No binaries permitted for auto-qchem: 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https://www.piwheels.org/simple/auto-qchem/auto_qchem-1.2.6-py3-none-any.whl#sha256=fcc916fa6579202295a94cdac83fdcec6926809aa871de0d8b1c9a4390849344 (from https://www.piwheels.org/simple/auto-qchem/) 2024-04-30T00:10:52,513 Skipping link: No binaries permitted for auto-qchem: https://www.piwheels.org/simple/auto-qchem/auto_qchem-1.2.0-py3-none-any.whl#sha256=a88d7cf6441ba89e34e0aca3dab8621e4fb02bb94f3560b10514886990be9f54 (from https://www.piwheels.org/simple/auto-qchem/) 2024-04-30T00:10:52,513 Skipping link: not a file: https://www.piwheels.org/simple/auto-qchem/ 2024-04-30T00:10:52,514 Skipping link: not a file: https://pypi.org/simple/auto-qchem/ 2024-04-30T00:10:52,543 Given no hashes to check 1 links for project 'auto-qchem': discarding no candidates 2024-04-30T00:10:52,569 Collecting auto-qchem==1.3.9 2024-04-30T00:10:52,572 Created temporary directory: /tmp/pip-unpack-aab9nixk 2024-04-30T00:10:52,813 Downloading auto-qchem-1.3.9.tar.gz (42 kB) 2024-04-30T00:10:52,906 Added auto-qchem==1.3.9 from https://files.pythonhosted.org/packages/5f/ad/7fd26af66c0d0832a8252f93767c98a4857ac47d81f9628290c8db7e03c3/auto-qchem-1.3.9.tar.gz to build tracker '/tmp/pip-build-tracker-3v9v74j7' 2024-04-30T00:10:52,908 Running setup.py (path:/tmp/pip-wheel-raf7z45c/auto-qchem_8bb214b1e241498692221229a4475a24/setup.py) egg_info for package auto-qchem 2024-04-30T00:10:52,909 Created temporary directory: /tmp/pip-pip-egg-info-31w7zgx4 2024-04-30T00:10:52,909 Preparing metadata (setup.py): started 2024-04-30T00:10:52,910 Running command python setup.py egg_info 2024-04-30T00:10:54,201 running egg_info 2024-04-30T00:10:54,203 creating /tmp/pip-pip-egg-info-31w7zgx4/auto_qchem.egg-info 2024-04-30T00:10:54,227 writing /tmp/pip-pip-egg-info-31w7zgx4/auto_qchem.egg-info/PKG-INFO 2024-04-30T00:10:54,231 writing dependency_links to /tmp/pip-pip-egg-info-31w7zgx4/auto_qchem.egg-info/dependency_links.txt 2024-04-30T00:10:54,233 writing requirements to /tmp/pip-pip-egg-info-31w7zgx4/auto_qchem.egg-info/requires.txt 2024-04-30T00:10:54,234 writing top-level names to /tmp/pip-pip-egg-info-31w7zgx4/auto_qchem.egg-info/top_level.txt 2024-04-30T00:10:54,235 writing manifest file '/tmp/pip-pip-egg-info-31w7zgx4/auto_qchem.egg-info/SOURCES.txt' 2024-04-30T00:10:54,318 reading manifest file '/tmp/pip-pip-egg-info-31w7zgx4/auto_qchem.egg-info/SOURCES.txt' 2024-04-30T00:10:54,322 adding license file 'LICENSE.md' 2024-04-30T00:10:54,323 writing manifest file '/tmp/pip-pip-egg-info-31w7zgx4/auto_qchem.egg-info/SOURCES.txt' 2024-04-30T00:10:54,441 Preparing metadata (setup.py): finished with status 'done' 2024-04-30T00:10:54,445 Source in /tmp/pip-wheel-raf7z45c/auto-qchem_8bb214b1e241498692221229a4475a24 has version 1.3.9, which satisfies requirement auto-qchem==1.3.9 from https://files.pythonhosted.org/packages/5f/ad/7fd26af66c0d0832a8252f93767c98a4857ac47d81f9628290c8db7e03c3/auto-qchem-1.3.9.tar.gz 2024-04-30T00:10:54,446 Removed auto-qchem==1.3.9 from https://files.pythonhosted.org/packages/5f/ad/7fd26af66c0d0832a8252f93767c98a4857ac47d81f9628290c8db7e03c3/auto-qchem-1.3.9.tar.gz from build tracker '/tmp/pip-build-tracker-3v9v74j7' 2024-04-30T00:10:54,451 Created temporary directory: /tmp/pip-unpack-h1nyuwjm 2024-04-30T00:10:54,452 Created temporary directory: /tmp/pip-unpack-408zug4t 2024-04-30T00:10:54,473 Building wheels for collected packages: auto-qchem 2024-04-30T00:10:54,478 Created temporary directory: /tmp/pip-wheel-690x8mgn 2024-04-30T00:10:54,478 Building wheel for auto-qchem (setup.py): started 2024-04-30T00:10:54,479 Destination directory: /tmp/pip-wheel-690x8mgn 2024-04-30T00:10:54,480 Running command python setup.py bdist_wheel 2024-04-30T00:10:55,535 running bdist_wheel 2024-04-30T00:10:55,632 running build 2024-04-30T00:10:55,632 running build_py 2024-04-30T00:10:55,660 creating build 2024-04-30T00:10:55,660 creating build/lib 2024-04-30T00:10:55,661 creating build/lib/autoqchem 2024-04-30T00:10:55,663 copying autoqchem/molecule.py -> build/lib/autoqchem 2024-04-30T00:10:55,664 copying autoqchem/gaussian_log_extractor.py -> build/lib/autoqchem 2024-04-30T00:10:55,667 copying autoqchem/slurm_manager.py -> build/lib/autoqchem 2024-04-30T00:10:55,670 copying autoqchem/rdkit_utils.py -> build/lib/autoqchem 2024-04-30T00:10:55,672 copying autoqchem/test.py -> build/lib/autoqchem 2024-04-30T00:10:55,674 copying autoqchem/descriptor_functions.py -> build/lib/autoqchem 2024-04-30T00:10:55,675 copying autoqchem/openbabel_utils.py -> build/lib/autoqchem 2024-04-30T00:10:55,677 copying autoqchem/sge_manager.py -> build/lib/autoqchem 2024-04-30T00:10:55,680 copying autoqchem/db_functions.py -> build/lib/autoqchem 2024-04-30T00:10:55,683 copying autoqchem/gaussian_input_generator.py -> build/lib/autoqchem 2024-04-30T00:10:55,685 copying autoqchem/helper_classes.py -> build/lib/autoqchem 2024-04-30T00:10:55,688 copying autoqchem/helper_functions.py -> build/lib/autoqchem 2024-04-30T00:10:55,690 copying autoqchem/__init__.py -> build/lib/autoqchem 2024-04-30T00:10:55,691 copying autoqchem/draw_utils.py -> build/lib/autoqchem 2024-04-30T00:10:55,721 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-04-30T00:10:55,721 !! 2024-04-30T00:10:55,722 ******************************************************************************** 2024-04-30T00:10:55,723 Please avoid running ``setup.py`` directly. 2024-04-30T00:10:55,723 Instead, use pypa/build, pypa/installer or other 2024-04-30T00:10:55,724 standards-based tools. 2024-04-30T00:10:55,725 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-04-30T00:10:55,725 ******************************************************************************** 2024-04-30T00:10:55,726 !! 2024-04-30T00:10:55,727 self.initialize_options() 2024-04-30T00:10:55,747 installing to build/bdist.linux-armv7l/wheel 2024-04-30T00:10:55,747 running install 2024-04-30T00:10:55,771 running install_lib 2024-04-30T00:10:55,799 creating build/bdist.linux-armv7l 2024-04-30T00:10:55,799 creating build/bdist.linux-armv7l/wheel 2024-04-30T00:10:55,801 creating build/bdist.linux-armv7l/wheel/autoqchem 2024-04-30T00:10:55,802 copying build/lib/autoqchem/molecule.py -> build/bdist.linux-armv7l/wheel/autoqchem 2024-04-30T00:10:55,810 copying build/lib/autoqchem/gaussian_log_extractor.py -> build/bdist.linux-armv7l/wheel/autoqchem 2024-04-30T00:10:55,813 copying build/lib/autoqchem/slurm_manager.py -> build/bdist.linux-armv7l/wheel/autoqchem 2024-04-30T00:10:55,817 copying build/lib/autoqchem/rdkit_utils.py -> build/bdist.linux-armv7l/wheel/autoqchem 2024-04-30T00:10:55,819 copying build/lib/autoqchem/test.py -> build/bdist.linux-armv7l/wheel/autoqchem 2024-04-30T00:10:55,821 copying build/lib/autoqchem/descriptor_functions.py -> build/bdist.linux-armv7l/wheel/autoqchem 2024-04-30T00:10:55,823 copying build/lib/autoqchem/openbabel_utils.py -> build/bdist.linux-armv7l/wheel/autoqchem 2024-04-30T00:10:55,825 copying build/lib/autoqchem/sge_manager.py -> build/bdist.linux-armv7l/wheel/autoqchem 2024-04-30T00:10:55,829 copying build/lib/autoqchem/db_functions.py -> build/bdist.linux-armv7l/wheel/autoqchem 2024-04-30T00:10:55,834 copying build/lib/autoqchem/gaussian_input_generator.py -> build/bdist.linux-armv7l/wheel/autoqchem 2024-04-30T00:10:55,839 copying build/lib/autoqchem/helper_classes.py -> build/bdist.linux-armv7l/wheel/autoqchem 2024-04-30T00:10:55,843 copying build/lib/autoqchem/helper_functions.py -> build/bdist.linux-armv7l/wheel/autoqchem 2024-04-30T00:10:55,849 copying build/lib/autoqchem/__init__.py -> build/bdist.linux-armv7l/wheel/autoqchem 2024-04-30T00:10:55,854 copying build/lib/autoqchem/draw_utils.py -> build/bdist.linux-armv7l/wheel/autoqchem 2024-04-30T00:10:55,859 running install_data 2024-04-30T00:10:55,896 creating build/bdist.linux-armv7l/wheel/auto_qchem-1.3.9.data 2024-04-30T00:10:55,897 creating build/bdist.linux-armv7l/wheel/auto_qchem-1.3.9.data/data 2024-04-30T00:10:55,898 warning: install_data: setup script did not provide a directory for 'config.yml' -- installing right in 'build/bdist.linux-armv7l/wheel/auto_qchem-1.3.9.data/data' 2024-04-30T00:10:55,900 copying config.yml -> build/bdist.linux-armv7l/wheel/auto_qchem-1.3.9.data/data 2024-04-30T00:10:55,904 running install_egg_info 2024-04-30T00:10:56,016 running egg_info 2024-04-30T00:10:56,041 writing auto_qchem.egg-info/PKG-INFO 2024-04-30T00:10:56,044 writing dependency_links to auto_qchem.egg-info/dependency_links.txt 2024-04-30T00:10:56,046 writing requirements to auto_qchem.egg-info/requires.txt 2024-04-30T00:10:56,047 writing top-level names to auto_qchem.egg-info/top_level.txt 2024-04-30T00:10:56,074 reading manifest file 'auto_qchem.egg-info/SOURCES.txt' 2024-04-30T00:10:56,076 adding license file 'LICENSE.md' 2024-04-30T00:10:56,078 writing manifest file 'auto_qchem.egg-info/SOURCES.txt' 2024-04-30T00:10:56,080 Copying auto_qchem.egg-info to build/bdist.linux-armv7l/wheel/auto_qchem-1.3.9-py3.11.egg-info 2024-04-30T00:10:56,089 running install_scripts 2024-04-30T00:10:56,106 creating build/bdist.linux-armv7l/wheel/auto_qchem-1.3.9.dist-info/WHEEL 2024-04-30T00:10:56,109 creating '/tmp/pip-wheel-690x8mgn/auto_qchem-1.3.9-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-04-30T00:10:56,111 adding 'auto_qchem-1.3.9.data/data/config.yml' 2024-04-30T00:10:56,113 adding 'autoqchem/__init__.py' 2024-04-30T00:10:56,116 adding 'autoqchem/db_functions.py' 2024-04-30T00:10:56,118 adding 'autoqchem/descriptor_functions.py' 2024-04-30T00:10:56,119 adding 'autoqchem/draw_utils.py' 2024-04-30T00:10:56,121 adding 'autoqchem/gaussian_input_generator.py' 2024-04-30T00:10:56,123 adding 'autoqchem/gaussian_log_extractor.py' 2024-04-30T00:10:56,125 adding 'autoqchem/helper_classes.py' 2024-04-30T00:10:56,126 adding 'autoqchem/helper_functions.py' 2024-04-30T00:10:56,127 adding 'autoqchem/molecule.py' 2024-04-30T00:10:56,129 adding 'autoqchem/openbabel_utils.py' 2024-04-30T00:10:56,131 adding 'autoqchem/rdkit_utils.py' 2024-04-30T00:10:56,134 adding 'autoqchem/sge_manager.py' 2024-04-30T00:10:56,137 adding 'autoqchem/slurm_manager.py' 2024-04-30T00:10:56,139 adding 'autoqchem/test.py' 2024-04-30T00:10:56,145 adding 'auto_qchem-1.3.9.dist-info/LICENSE.md' 2024-04-30T00:10:56,146 adding 'auto_qchem-1.3.9.dist-info/METADATA' 2024-04-30T00:10:56,147 adding 'auto_qchem-1.3.9.dist-info/WHEEL' 2024-04-30T00:10:56,148 adding 'auto_qchem-1.3.9.dist-info/top_level.txt' 2024-04-30T00:10:56,149 adding 'auto_qchem-1.3.9.dist-info/RECORD' 2024-04-30T00:10:56,151 removing build/bdist.linux-armv7l/wheel 2024-04-30T00:10:56,276 Building wheel for auto-qchem (setup.py): finished with status 'done' 2024-04-30T00:10:56,279 Created wheel for auto-qchem: filename=auto_qchem-1.3.9-py3-none-any.whl size=53508 sha256=0a628db2e9bcb127b8420c451832e74dd8e9f91111f18b3aefc69b70e7f0dfe4 2024-04-30T00:10:56,280 Stored in directory: /tmp/pip-ephem-wheel-cache-zanis2wd/wheels/f0/d1/e9/beacbd3cd981236a5da0f30293ad31901e9d404ec261b7c6ef 2024-04-30T00:10:56,291 Successfully built auto-qchem 2024-04-30T00:10:56,296 Removed build tracker: '/tmp/pip-build-tracker-3v9v74j7'