2024-05-01T16:18:40,332 Created temporary directory: /tmp/pip-build-tracker-pggky10e 2024-05-01T16:18:40,334 Initialized build tracking at /tmp/pip-build-tracker-pggky10e 2024-05-01T16:18:40,334 Created build tracker: /tmp/pip-build-tracker-pggky10e 2024-05-01T16:18:40,335 Entered build tracker: /tmp/pip-build-tracker-pggky10e 2024-05-01T16:18:40,335 Created temporary directory: /tmp/pip-wheel-eix9zhmg 2024-05-01T16:18:40,338 Created temporary directory: /tmp/pip-ephem-wheel-cache-srxnc6ko 2024-05-01T16:18:40,361 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-05-01T16:18:40,364 2 location(s) to search for versions of hivclustering: 2024-05-01T16:18:40,364 * https://pypi.org/simple/hivclustering/ 2024-05-01T16:18:40,364 * https://www.piwheels.org/simple/hivclustering/ 2024-05-01T16:18:40,365 Fetching project page and analyzing links: https://pypi.org/simple/hivclustering/ 2024-05-01T16:18:40,366 Getting page https://pypi.org/simple/hivclustering/ 2024-05-01T16:18:40,367 Found index url https://pypi.org/simple/ 2024-05-01T16:18:40,579 Fetched page https://pypi.org/simple/hivclustering/ as application/vnd.pypi.simple.v1+json 2024-05-01T16:18:40,585 Found link https://files.pythonhosted.org/packages/be/63/218c39b9ad0311be7a12702cf853f2d0305e6fd4458d58d3ee0a3bf429a6/hivclustering-1.2.5.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.2.5 2024-05-01T16:18:40,586 Found link https://files.pythonhosted.org/packages/67/d6/ccf018b983946e9edbcb38bdac99dad65e3199623505563a793e3d7993ca/hivclustering-1.2.6.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.2.6 2024-05-01T16:18:40,586 Found link https://files.pythonhosted.org/packages/94/78/880ea9da2705624a346e8f823b6cab8fc264b8505336d5d19280af23e619/hivclustering-1.2.7.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.2.7 2024-05-01T16:18:40,587 Found link https://files.pythonhosted.org/packages/50/01/828d4bfa522848698970e08f4277024c18852b86dbdfc5191bb271d756af/hivclustering-1.2.8.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.2.8 2024-05-01T16:18:40,588 Found link https://files.pythonhosted.org/packages/b8/f3/4eb8073b7f1343311edb38046396c39debb8553bbbcabf3866cfe9057c4e/hivclustering-1.3.0.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.3.0 2024-05-01T16:18:40,588 Found link https://files.pythonhosted.org/packages/48/82/f9031dd1c00db81a9165533a52508e28190a9a48b88103f7d61b18f3ed6d/hivclustering-1.3.1.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.3.1 2024-05-01T16:18:40,589 Found link https://files.pythonhosted.org/packages/eb/5c/56e25f045d57d87737de12af90eb9d31d6e0ddb490c614fcf719a5a51de8/hivclustering-1.3.2.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.3.2 2024-05-01T16:18:40,590 Found link https://files.pythonhosted.org/packages/ad/1b/ddc494adedcd724936919219d78d243f45a07afd806a91f64e6b6b83a411/hivclustering-1.4.1.macosx-10.13-x86_64.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.4.1.macosx-10.13-x86_64 2024-05-01T16:18:40,591 Found link https://files.pythonhosted.org/packages/c8/ad/30f905579ed48a1df529c7deb1d9da7fb2967fc995b3a7a6aab4395244e7/hivclustering-1.4.2.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.4.2 2024-05-01T16:18:40,592 Found link https://files.pythonhosted.org/packages/52/bb/41b5d5516072ed73d68dc15c00412d9573eaf91e23d67bd98ae78d900d34/hivclustering-1.5.1.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.5.1 2024-05-01T16:18:40,592 Found link https://files.pythonhosted.org/packages/a0/c2/8b3aec81b0f81a22d9185cfa5d37d55934cc40606b06925c3ee9c3f491af/hivclustering-1.5.2.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.5.2 2024-05-01T16:18:40,593 Found link https://files.pythonhosted.org/packages/63/17/4605c1c87e3723a00e8eb42f7d4447f7caf435d42157098ff6c01bdd2e37/hivclustering-1.5.3.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.5.3 2024-05-01T16:18:40,594 Found link https://files.pythonhosted.org/packages/fd/07/061ce4cf24804185c21ec2fef88fcb32e879eeabf5f3d8175e8ea542f971/hivclustering-1.5.4.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.5.4 2024-05-01T16:18:40,595 Found link https://files.pythonhosted.org/packages/0c/a6/867a016c6b57f0ba9319a19965f71c0aa3ffeea31de659cec77eec61e1f7/hivclustering-1.5.5.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.5.5 2024-05-01T16:18:40,596 Found link https://files.pythonhosted.org/packages/21/e2/594b207e4ca053018bb7c6a05a09e5d6320e6b763d7ce3168fd9cd320b92/hivclustering-1.5.6.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.5.6 2024-05-01T16:18:40,596 Found link https://files.pythonhosted.org/packages/ba/96/d6e85a86f9155dab46e4b8eb9ff9859f281ec5d5ddfda2893411cb470ab7/hivclustering-1.6.0.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.6.0 2024-05-01T16:18:40,597 Found link https://files.pythonhosted.org/packages/0a/42/d7d17d0f48093305713468653526872f20d447d91d95dde19539a5c98f4b/hivclustering-1.6.1.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.6.1 2024-05-01T16:18:40,597 Found link https://files.pythonhosted.org/packages/06/27/ddc42bc60270c1b726a9dcd1971665ac257ca423cd83032cc4157000aaba/hivclustering-1.6.2.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.6.2 2024-05-01T16:18:40,598 Found link https://files.pythonhosted.org/packages/8c/27/1c8b29923936dda2893e2c060062bd99c11c01806a769fce6213d12d6587/hivclustering-1.6.3.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.6.3 2024-05-01T16:18:40,599 Found link https://files.pythonhosted.org/packages/f4/87/b69a4f8b1b5495cdd411fbf6b26719c614bf9df2769dc879d8ebc629c9b4/hivclustering-1.6.4.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.6.4 2024-05-01T16:18:40,599 Skipping link: No binaries permitted for hivclustering: https://files.pythonhosted.org/packages/34/8c/0de865c0c8fb2ecd1d89ede3f3f83f85d197e271b7dcdcaa3516c881c965/hivclustering-1.6.5-py3-none-any.whl (from https://pypi.org/simple/hivclustering/) 2024-05-01T16:18:40,600 Found link https://files.pythonhosted.org/packages/4c/b4/7a699eca4918e73b2eb14ad3ff99c7e609ee88601b060a2fee4c96417673/hivclustering-1.6.5.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.6.5 2024-05-01T16:18:40,600 Skipping link: No binaries permitted for hivclustering: https://files.pythonhosted.org/packages/21/33/849c3fe3744ba1f195434e32297893568d1312c0464b8912491d356ef22e/hivclustering-1.6.6-py3-none-any.whl (from https://pypi.org/simple/hivclustering/) 2024-05-01T16:18:40,601 Skipping link: No binaries permitted for hivclustering: https://files.pythonhosted.org/packages/2c/13/c6b43cda5d3950b48e82274cf39455132c64cfe88e23ca9b348bcfc0b845/hivclustering-1.6.7-py3-none-any.whl (from https://pypi.org/simple/hivclustering/) 2024-05-01T16:18:40,601 Found link https://files.pythonhosted.org/packages/98/28/f855f0803a8fe6f4f0916b158f57e50bc63a38576b73958c56af95128c8f/hivclustering-1.6.7.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.6.7 2024-05-01T16:18:40,602 Found link https://files.pythonhosted.org/packages/ab/92/e6ec5e7e907d6857dfbe0f1e6e9a0676c9c8a9f55eac2afe35e0353797c2/hivclustering-1.6.8.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.6.8 2024-05-01T16:18:40,603 Found link https://files.pythonhosted.org/packages/ee/cf/c13c2c1e4141935145b94d33f8f2bdf96677009643401bce9a5fba88c0cf/hivclustering-1.7.0.tar.gz (from https://pypi.org/simple/hivclustering/), version: 1.7.0 2024-05-01T16:18:40,604 Fetching project page and analyzing links: https://www.piwheels.org/simple/hivclustering/ 2024-05-01T16:18:40,604 Getting page https://www.piwheels.org/simple/hivclustering/ 2024-05-01T16:18:40,606 Found index url https://www.piwheels.org/simple/ 2024-05-01T16:18:40,823 Fetched page https://www.piwheels.org/simple/hivclustering/ as text/html 2024-05-01T16:18:40,830 Skipping link: No binaries permitted for hivclustering: https://www.piwheels.org/simple/hivclustering/hivclustering-1.6.8-py3-none-any.whl#sha256=00ad2bf3d292c74fc455a3b016cc9df40ad9710a0650b675effff0707c1d93b0 (from https://www.piwheels.org/simple/hivclustering/) 2024-05-01T16:18:40,831 Skipping link: No binaries permitted for hivclustering: https://www.piwheels.org/simple/hivclustering/hivclustering-1.6.7-py3-none-any.whl#sha256=ded16d49659139342564ed043b2b299fd55c4386a8f11fb8912a85390d85fa85 (from https://www.piwheels.org/simple/hivclustering/) 2024-05-01T16:18:40,832 Skipping link: No binaries permitted for hivclustering: https://www.piwheels.org/simple/hivclustering/hivclustering-1.6.5-py3-none-any.whl#sha256=8fa4652c8de8e4b7effbf348b4eaad871e370417ae9478b82781cace3e9abfb2 (from https://www.piwheels.org/simple/hivclustering/) 2024-05-01T16:18:40,832 Skipping link: No binaries permitted for hivclustering: https://www.piwheels.org/simple/hivclustering/hivclustering-1.6.4-py3-none-any.whl#sha256=f73e34b9de3cb3aed902500c17d44c7db4143461ff3c7a99abb93c65c870c4a8 (from https://www.piwheels.org/simple/hivclustering/) 2024-05-01T16:18:40,833 Skipping link: No binaries permitted for hivclustering: https://www.piwheels.org/simple/hivclustering/hivclustering-1.6.3-py3-none-any.whl#sha256=804fd81fb235d1a930cf3781a582d024d8325b55b94ff5f53704e2103fff0b4e (from https://www.piwheels.org/simple/hivclustering/) 2024-05-01T16:18:40,833 Skipping link: No binaries permitted for hivclustering: https://www.piwheels.org/simple/hivclustering/hivclustering-1.6.2-py3-none-any.whl#sha256=19f65c28d9813f23f33199d89f97997b1b7b111a8f4a960f2bfdeb92b839dcc1 (from https://www.piwheels.org/simple/hivclustering/) 2024-05-01T16:18:40,834 Skipping link: No binaries permitted for hivclustering: https://www.piwheels.org/simple/hivclustering/hivclustering-1.6.1-py3-none-any.whl#sha256=bc8e68a40b340e470e6ba0d8ab28ee39f515b7c18e38c1b940cba3cf274e2543 (from https://www.piwheels.org/simple/hivclustering/) 2024-05-01T16:18:40,834 Skipping link: No binaries permitted for hivclustering: https://www.piwheels.org/simple/hivclustering/hivclustering-1.6.0-py3-none-any.whl#sha256=d10c86010af362b6fcc06869ad00b49401dc5622f7931dbed7f7ebac079e8e61 (from https://www.piwheels.org/simple/hivclustering/) 2024-05-01T16:18:40,835 Skipping link: No binaries permitted for hivclustering: https://www.piwheels.org/simple/hivclustering/hivclustering-1.5.6-py3-none-any.whl#sha256=13d5ff3e1fbe5405c9b1c99bef883a1a013ee9f36305895bec105463043cbd6d (from https://www.piwheels.org/simple/hivclustering/) 2024-05-01T16:18:40,836 Skipping link: No binaries permitted for hivclustering: https://www.piwheels.org/simple/hivclustering/hivclustering-1.5.5-py3-none-any.whl#sha256=ced37907eadfaa871ecef6943a560aee9a4bc36c60e912baa2f773a5d9785edd (from https://www.piwheels.org/simple/hivclustering/) 2024-05-01T16:18:40,837 Skipping link: No binaries permitted for hivclustering: https://www.piwheels.org/simple/hivclustering/hivclustering-1.5.4-py3-none-any.whl#sha256=c7a1e84f99736e78084bb1bd2ab7f41f165a488b609c30b1680ecaabb792f44d (from https://www.piwheels.org/simple/hivclustering/) 2024-05-01T16:18:40,837 Skipping link: No binaries permitted for hivclustering: https://www.piwheels.org/simple/hivclustering/hivclustering-1.5.3-py3-none-any.whl#sha256=2c4a710ca8657026ddade8b8015ea20b40a4034cd93a122cbbee64a1bd008de7 (from https://www.piwheels.org/simple/hivclustering/) 2024-05-01T16:18:40,838 Skipping link: No binaries permitted for hivclustering: https://www.piwheels.org/simple/hivclustering/hivclustering-1.5.2-py3-none-any.whl#sha256=65fb67456a78b323c09fb3cf309a33df8ebf950de0d81439e359d167a745ad4d (from https://www.piwheels.org/simple/hivclustering/) 2024-05-01T16:18:40,839 Skipping link: No binaries permitted for hivclustering: https://www.piwheels.org/simple/hivclustering/hivclustering-1.5.1-py3-none-any.whl#sha256=39254435aa0fd64e726736d72d668057d4ad98aea271a8eaa2ea4f31479cbea4 (from https://www.piwheels.org/simple/hivclustering/) 2024-05-01T16:18:40,839 Skipping link: No binaries permitted for hivclustering: https://www.piwheels.org/simple/hivclustering/hivclustering-1.4.2-py3-none-any.whl#sha256=d0e93678e49b411f0c6a5f83b7c5940c96cc23bfbecb2ff6a740073ec3be119f (from https://www.piwheels.org/simple/hivclustering/) 2024-05-01T16:18:40,840 Skipping link: No binaries permitted for hivclustering: https://www.piwheels.org/simple/hivclustering/hivclustering-1.3.2-py3-none-any.whl#sha256=ecd6ea13b75a731c5f495b40207e82838399a0afb7f2ed27c996cf93af33046b (from https://www.piwheels.org/simple/hivclustering/) 2024-05-01T16:18:40,841 Skipping link: No binaries permitted for hivclustering: https://www.piwheels.org/simple/hivclustering/hivclustering-1.3.1-py3-none-any.whl#sha256=e9371b4ef989909b421bcb44cdb742d7dec4ecd43a42a71b4115fd7deb998b2b (from https://www.piwheels.org/simple/hivclustering/) 2024-05-01T16:18:40,842 Skipping link: No binaries permitted for hivclustering: https://www.piwheels.org/simple/hivclustering/hivclustering-1.3.0-py3-none-any.whl#sha256=6ac03462485ef47846f56e9f56ee93b7bc21be43ffe327f0257dfcae39d020f0 (from https://www.piwheels.org/simple/hivclustering/) 2024-05-01T16:18:40,842 Skipping link: No binaries permitted for hivclustering: https://www.piwheels.org/simple/hivclustering/hivclustering-1.2.8-py3-none-any.whl#sha256=6f94a93b31ce7f22bcbc02c3325e5d444d6ed1c04d5464d47ffaacc5d5c132fe (from https://www.piwheels.org/simple/hivclustering/) 2024-05-01T16:18:40,842 Skipping link: No binaries permitted for hivclustering: https://www.piwheels.org/simple/hivclustering/hivclustering-1.2.7-py3-none-any.whl#sha256=1b3a079fe5e93027c8ec35db7fe829c6f09e5e497a25f0ce4db1fed955170ffa (from https://www.piwheels.org/simple/hivclustering/) 2024-05-01T16:18:40,843 Skipping link: No binaries permitted for hivclustering: https://www.piwheels.org/simple/hivclustering/hivclustering-1.2.6-py3-none-any.whl#sha256=e987e29496d8b0c8d742860ed5b5c9cd2d1f42db6de3734252a27d62e95614f8 (from https://www.piwheels.org/simple/hivclustering/) 2024-05-01T16:18:40,843 Skipping link: No binaries permitted for hivclustering: https://www.piwheels.org/simple/hivclustering/hivclustering-1.2.5-py3-none-any.whl#sha256=f1deb7709118e452442b1a1214e07059f270c1031e93150a3a4f9b92895bb09e (from https://www.piwheels.org/simple/hivclustering/) 2024-05-01T16:18:40,844 Skipping link: not a file: https://www.piwheels.org/simple/hivclustering/ 2024-05-01T16:18:40,844 Skipping link: not a file: https://pypi.org/simple/hivclustering/ 2024-05-01T16:18:40,865 Given no hashes to check 1 links for project 'hivclustering': discarding no candidates 2024-05-01T16:18:40,883 Collecting hivclustering==1.7.0 2024-05-01T16:18:40,886 Created temporary directory: /tmp/pip-unpack-4k6vbket 2024-05-01T16:18:41,103 Downloading hivclustering-1.7.0.tar.gz (59 kB) 2024-05-01T16:18:41,230 Added hivclustering==1.7.0 from https://files.pythonhosted.org/packages/ee/cf/c13c2c1e4141935145b94d33f8f2bdf96677009643401bce9a5fba88c0cf/hivclustering-1.7.0.tar.gz to build tracker '/tmp/pip-build-tracker-pggky10e' 2024-05-01T16:18:41,232 Running setup.py (path:/tmp/pip-wheel-eix9zhmg/hivclustering_fe56d5bbce224261aab55f0d7629070c/setup.py) egg_info for package hivclustering 2024-05-01T16:18:41,233 Created temporary directory: /tmp/pip-pip-egg-info-3y8p8ekx 2024-05-01T16:18:41,234 Preparing metadata (setup.py): started 2024-05-01T16:18:41,235 Running command python setup.py egg_info 2024-05-01T16:18:42,354 running egg_info 2024-05-01T16:18:42,356 creating /tmp/pip-pip-egg-info-3y8p8ekx/hivclustering.egg-info 2024-05-01T16:18:42,381 writing /tmp/pip-pip-egg-info-3y8p8ekx/hivclustering.egg-info/PKG-INFO 2024-05-01T16:18:42,385 writing dependency_links to /tmp/pip-pip-egg-info-3y8p8ekx/hivclustering.egg-info/dependency_links.txt 2024-05-01T16:18:42,388 writing requirements to /tmp/pip-pip-egg-info-3y8p8ekx/hivclustering.egg-info/requires.txt 2024-05-01T16:18:42,389 writing top-level names to /tmp/pip-pip-egg-info-3y8p8ekx/hivclustering.egg-info/top_level.txt 2024-05-01T16:18:42,391 writing manifest file '/tmp/pip-pip-egg-info-3y8p8ekx/hivclustering.egg-info/SOURCES.txt' 2024-05-01T16:18:42,499 reading manifest file '/tmp/pip-pip-egg-info-3y8p8ekx/hivclustering.egg-info/SOURCES.txt' 2024-05-01T16:18:42,502 writing manifest file '/tmp/pip-pip-egg-info-3y8p8ekx/hivclustering.egg-info/SOURCES.txt' 2024-05-01T16:18:42,620 Preparing metadata (setup.py): finished with status 'done' 2024-05-01T16:18:42,624 Source in /tmp/pip-wheel-eix9zhmg/hivclustering_fe56d5bbce224261aab55f0d7629070c has version 1.7.0, which satisfies requirement hivclustering==1.7.0 from https://files.pythonhosted.org/packages/ee/cf/c13c2c1e4141935145b94d33f8f2bdf96677009643401bce9a5fba88c0cf/hivclustering-1.7.0.tar.gz 2024-05-01T16:18:42,625 Removed hivclustering==1.7.0 from https://files.pythonhosted.org/packages/ee/cf/c13c2c1e4141935145b94d33f8f2bdf96677009643401bce9a5fba88c0cf/hivclustering-1.7.0.tar.gz from build tracker '/tmp/pip-build-tracker-pggky10e' 2024-05-01T16:18:42,628 Created temporary directory: /tmp/pip-unpack-a_sl7y5r 2024-05-01T16:18:42,629 Created temporary directory: /tmp/pip-unpack-yno6ij7_ 2024-05-01T16:18:42,641 Building wheels for collected packages: hivclustering 2024-05-01T16:18:42,645 Created temporary directory: /tmp/pip-wheel-q8sock0w 2024-05-01T16:18:42,646 Building wheel for hivclustering (setup.py): started 2024-05-01T16:18:42,647 Destination directory: /tmp/pip-wheel-q8sock0w 2024-05-01T16:18:42,647 Running command python setup.py bdist_wheel 2024-05-01T16:18:43,806 running bdist_wheel 2024-05-01T16:18:43,970 running build 2024-05-01T16:18:43,971 running build_py 2024-05-01T16:18:43,998 creating build 2024-05-01T16:18:43,999 creating build/lib 2024-05-01T16:18:43,999 creating build/lib/hivclustering 2024-05-01T16:18:44,000 copying hivclustering/networkbuild.py -> build/lib/hivclustering 2024-05-01T16:18:44,004 copying hivclustering/mtnetwork.py -> build/lib/hivclustering 2024-05-01T16:18:44,008 copying hivclustering/__init__.py -> build/lib/hivclustering 2024-05-01T16:18:44,011 creating build/lib/hivclustering/data 2024-05-01T16:18:44,012 creating build/lib/hivclustering/data/HBL 2024-05-01T16:18:44,013 copying hivclustering/data/HBL/ExtractACluster.bf -> build/lib/hivclustering/data/HBL 2024-05-01T16:18:44,015 copying hivclustering/data/HBL/SimulateSequence.bf -> build/lib/hivclustering/data/HBL 2024-05-01T16:18:44,018 copying hivclustering/data/HBL/ExtractSequences.bf -> build/lib/hivclustering/data/HBL 2024-05-01T16:18:44,020 copying hivclustering/data/HBL/DegreeDistributions.bf -> build/lib/hivclustering/data/HBL 2024-05-01T16:18:44,023 copying hivclustering/data/HBL/TriangleSupport.bf -> build/lib/hivclustering/data/HBL 2024-05-01T16:18:44,025 copying hivclustering/data/HBL/CycleSupport.bf -> build/lib/hivclustering/data/HBL 2024-05-01T16:18:44,028 running build_scripts 2024-05-01T16:18:44,028 creating build/scripts-3.11 2024-05-01T16:18:44,029 copying and adjusting scripts/hivnetworkcsv -> build/scripts-3.11 2024-05-01T16:18:44,033 copying and adjusting scripts/TNS -> build/scripts-3.11 2024-05-01T16:18:44,036 copying and adjusting scripts/hivnetworkannotate -> build/scripts-3.11 2024-05-01T16:18:44,038 changing mode of build/scripts-3.11/hivnetworkcsv from 644 to 755 2024-05-01T16:18:44,038 changing mode of build/scripts-3.11/TNS from 644 to 755 2024-05-01T16:18:44,039 changing mode of build/scripts-3.11/hivnetworkannotate from 644 to 755 2024-05-01T16:18:44,065 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-05-01T16:18:44,065 !! 2024-05-01T16:18:44,067 ******************************************************************************** 2024-05-01T16:18:44,067 Please avoid running ``setup.py`` directly. 2024-05-01T16:18:44,068 Instead, use pypa/build, pypa/installer or other 2024-05-01T16:18:44,068 standards-based tools. 2024-05-01T16:18:44,070 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-05-01T16:18:44,070 ******************************************************************************** 2024-05-01T16:18:44,072 !! 2024-05-01T16:18:44,072 self.initialize_options() 2024-05-01T16:18:44,091 installing to build/bdist.linux-armv7l/wheel 2024-05-01T16:18:44,092 running install 2024-05-01T16:18:44,115 running install_lib 2024-05-01T16:18:44,140 creating build/bdist.linux-armv7l 2024-05-01T16:18:44,140 creating build/bdist.linux-armv7l/wheel 2024-05-01T16:18:44,142 creating build/bdist.linux-armv7l/wheel/hivclustering 2024-05-01T16:18:44,143 copying build/lib/hivclustering/networkbuild.py -> build/bdist.linux-armv7l/wheel/hivclustering 2024-05-01T16:18:44,146 copying build/lib/hivclustering/mtnetwork.py -> build/bdist.linux-armv7l/wheel/hivclustering 2024-05-01T16:18:44,150 copying build/lib/hivclustering/__init__.py -> build/bdist.linux-armv7l/wheel/hivclustering 2024-05-01T16:18:44,152 creating build/bdist.linux-armv7l/wheel/hivclustering/data 2024-05-01T16:18:44,153 creating build/bdist.linux-armv7l/wheel/hivclustering/data/HBL 2024-05-01T16:18:44,154 copying build/lib/hivclustering/data/HBL/ExtractACluster.bf -> build/bdist.linux-armv7l/wheel/hivclustering/data/HBL 2024-05-01T16:18:44,156 copying build/lib/hivclustering/data/HBL/SimulateSequence.bf -> build/bdist.linux-armv7l/wheel/hivclustering/data/HBL 2024-05-01T16:18:44,159 copying build/lib/hivclustering/data/HBL/ExtractSequences.bf -> build/bdist.linux-armv7l/wheel/hivclustering/data/HBL 2024-05-01T16:18:44,160 copying build/lib/hivclustering/data/HBL/DegreeDistributions.bf -> build/bdist.linux-armv7l/wheel/hivclustering/data/HBL 2024-05-01T16:18:44,163 copying build/lib/hivclustering/data/HBL/TriangleSupport.bf -> build/bdist.linux-armv7l/wheel/hivclustering/data/HBL 2024-05-01T16:18:44,165 copying build/lib/hivclustering/data/HBL/CycleSupport.bf -> build/bdist.linux-armv7l/wheel/hivclustering/data/HBL 2024-05-01T16:18:44,167 running install_egg_info 2024-05-01T16:18:44,232 running egg_info 2024-05-01T16:18:44,257 writing hivclustering.egg-info/PKG-INFO 2024-05-01T16:18:44,262 writing dependency_links to hivclustering.egg-info/dependency_links.txt 2024-05-01T16:18:44,264 writing requirements to hivclustering.egg-info/requires.txt 2024-05-01T16:18:44,266 writing top-level names to hivclustering.egg-info/top_level.txt 2024-05-01T16:18:44,293 reading manifest file 'hivclustering.egg-info/SOURCES.txt' 2024-05-01T16:18:44,297 writing manifest file 'hivclustering.egg-info/SOURCES.txt' 2024-05-01T16:18:44,298 Copying hivclustering.egg-info to build/bdist.linux-armv7l/wheel/hivclustering-1.7.0-py3.11.egg-info 2024-05-01T16:18:44,308 running install_scripts 2024-05-01T16:18:44,309 creating build/bdist.linux-armv7l/wheel/hivclustering-1.7.0.data 2024-05-01T16:18:44,309 creating build/bdist.linux-armv7l/wheel/hivclustering-1.7.0.data/scripts 2024-05-01T16:18:44,311 copying build/scripts-3.11/TNS -> build/bdist.linux-armv7l/wheel/hivclustering-1.7.0.data/scripts 2024-05-01T16:18:44,313 copying build/scripts-3.11/hivnetworkcsv -> build/bdist.linux-armv7l/wheel/hivclustering-1.7.0.data/scripts 2024-05-01T16:18:44,316 copying build/scripts-3.11/hivnetworkannotate -> build/bdist.linux-armv7l/wheel/hivclustering-1.7.0.data/scripts 2024-05-01T16:18:44,319 changing mode of build/bdist.linux-armv7l/wheel/hivclustering-1.7.0.data/scripts/TNS to 755 2024-05-01T16:18:44,319 changing mode of build/bdist.linux-armv7l/wheel/hivclustering-1.7.0.data/scripts/hivnetworkcsv to 755 2024-05-01T16:18:44,320 changing mode of build/bdist.linux-armv7l/wheel/hivclustering-1.7.0.data/scripts/hivnetworkannotate to 755 2024-05-01T16:18:44,331 creating build/bdist.linux-armv7l/wheel/hivclustering-1.7.0.dist-info/WHEEL 2024-05-01T16:18:44,333 creating '/tmp/pip-wheel-q8sock0w/hivclustering-1.7.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-05-01T16:18:44,335 adding 'hivclustering/__init__.py' 2024-05-01T16:18:44,348 adding 'hivclustering/mtnetwork.py' 2024-05-01T16:18:44,353 adding 'hivclustering/networkbuild.py' 2024-05-01T16:18:44,356 adding 'hivclustering/data/HBL/CycleSupport.bf' 2024-05-01T16:18:44,358 adding 'hivclustering/data/HBL/DegreeDistributions.bf' 2024-05-01T16:18:44,359 adding 'hivclustering/data/HBL/ExtractACluster.bf' 2024-05-01T16:18:44,361 adding 'hivclustering/data/HBL/ExtractSequences.bf' 2024-05-01T16:18:44,363 adding 'hivclustering/data/HBL/SimulateSequence.bf' 2024-05-01T16:18:44,364 adding 'hivclustering/data/HBL/TriangleSupport.bf' 2024-05-01T16:18:44,368 adding 'hivclustering-1.7.0.data/scripts/TNS' 2024-05-01T16:18:44,370 adding 'hivclustering-1.7.0.data/scripts/hivnetworkannotate' 2024-05-01T16:18:44,373 adding 'hivclustering-1.7.0.data/scripts/hivnetworkcsv' 2024-05-01T16:18:44,375 adding 'hivclustering-1.7.0.dist-info/METADATA' 2024-05-01T16:18:44,376 adding 'hivclustering-1.7.0.dist-info/WHEEL' 2024-05-01T16:18:44,377 adding 'hivclustering-1.7.0.dist-info/top_level.txt' 2024-05-01T16:18:44,378 adding 'hivclustering-1.7.0.dist-info/RECORD' 2024-05-01T16:18:44,380 removing build/bdist.linux-armv7l/wheel 2024-05-01T16:18:44,506 Building wheel for hivclustering (setup.py): finished with status 'done' 2024-05-01T16:18:44,509 Created wheel for hivclustering: filename=hivclustering-1.7.0-py3-none-any.whl size=60631 sha256=a15f9d3931ed1f2651c731272966a8c6595b0dafa48a7dff87c552d28ee08e0d 2024-05-01T16:18:44,511 Stored in directory: /tmp/pip-ephem-wheel-cache-srxnc6ko/wheels/34/ab/42/160b986ae4c4bc3506c9ecbad907c175c887a83c0561db5a4c 2024-05-01T16:18:44,519 Successfully built hivclustering 2024-05-01T16:18:44,524 Removed build tracker: '/tmp/pip-build-tracker-pggky10e'