2024-05-07T11:04:12,646 Created temporary directory: /tmp/pip-build-tracker-fanc9iyw 2024-05-07T11:04:12,648 Initialized build tracking at /tmp/pip-build-tracker-fanc9iyw 2024-05-07T11:04:12,648 Created build tracker: /tmp/pip-build-tracker-fanc9iyw 2024-05-07T11:04:12,649 Entered build tracker: /tmp/pip-build-tracker-fanc9iyw 2024-05-07T11:04:12,650 Created temporary directory: /tmp/pip-wheel-xlemb_ka 2024-05-07T11:04:12,653 Created temporary directory: /tmp/pip-ephem-wheel-cache-hau858zi 2024-05-07T11:04:12,677 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-05-07T11:04:12,681 2 location(s) to search for versions of miniwdl-omics-run: 2024-05-07T11:04:12,681 * https://pypi.org/simple/miniwdl-omics-run/ 2024-05-07T11:04:12,681 * https://www.piwheels.org/simple/miniwdl-omics-run/ 2024-05-07T11:04:12,682 Fetching project page and analyzing links: https://pypi.org/simple/miniwdl-omics-run/ 2024-05-07T11:04:12,682 Getting page https://pypi.org/simple/miniwdl-omics-run/ 2024-05-07T11:04:12,684 Found index url https://pypi.org/simple/ 2024-05-07T11:04:12,902 Fetched page https://pypi.org/simple/miniwdl-omics-run/ as application/vnd.pypi.simple.v1+json 2024-05-07T11:04:12,905 Found link https://files.pythonhosted.org/packages/c6/d9/b02329f3e15b8912a5feaa2fbaa2e444e1a32834d15df1e77dad7e1169c3/miniwdl-omics-run-0.1.0.tar.gz (from https://pypi.org/simple/miniwdl-omics-run/) (requires-python:~=3.8), version: 0.1.0 2024-05-07T11:04:12,906 Skipping link: No binaries permitted for miniwdl-omics-run: https://files.pythonhosted.org/packages/e4/d5/37838df14d1871f055a068256a5651b84bf9d4671d3cbd0fd3442f8828b7/miniwdl_omics_run-0.1.0-py3-none-any.whl (from https://pypi.org/simple/miniwdl-omics-run/) (requires-python:~=3.8) 2024-05-07T11:04:12,907 Found link https://files.pythonhosted.org/packages/ee/52/b20c1a2df8c02cea434a69eb836474b01a170b16856f487162867ab18678/miniwdl-omics-run-0.2.0.tar.gz (from https://pypi.org/simple/miniwdl-omics-run/) (requires-python:~=3.8), version: 0.2.0 2024-05-07T11:04:12,908 Skipping link: No binaries permitted for miniwdl-omics-run: https://files.pythonhosted.org/packages/ca/41/76a27ef3ab7627a2ce81bca97434fd5c81981ade41fd363d13eff70c2219/miniwdl_omics_run-0.2.0-py3-none-any.whl (from https://pypi.org/simple/miniwdl-omics-run/) (requires-python:~=3.8) 2024-05-07T11:04:12,909 Found link https://files.pythonhosted.org/packages/6b/37/990cf87c1924ac7faa7d8e1a8529aa5e8ce407d5413b2989d70fafb7ab45/miniwdl-omics-run-0.3.0.tar.gz (from https://pypi.org/simple/miniwdl-omics-run/) (requires-python:~=3.8), version: 0.3.0 2024-05-07T11:04:12,910 Skipping link: No binaries permitted for miniwdl-omics-run: https://files.pythonhosted.org/packages/8e/9c/b6e67267b189417aecf2601fac56e89527922f320ca75ba7ee06e764969b/miniwdl_omics_run-0.3.0-py3-none-any.whl (from https://pypi.org/simple/miniwdl-omics-run/) (requires-python:~=3.8) 2024-05-07T11:04:12,911 Found link https://files.pythonhosted.org/packages/bb/0f/c7bca46de9e07cfd579997d23cfbd302acd6d7253316dec5321c5b6ed0cd/miniwdl-omics-run-0.4.0.tar.gz (from https://pypi.org/simple/miniwdl-omics-run/) (requires-python:~=3.8), version: 0.4.0 2024-05-07T11:04:12,911 Skipping link: No binaries permitted for miniwdl-omics-run: https://files.pythonhosted.org/packages/35/f7/e76fc54e763ca0a087f30367082553b04e3352a17fd8211072aa7dd8f8db/miniwdl_omics_run-0.4.0-py3-none-any.whl (from https://pypi.org/simple/miniwdl-omics-run/) (requires-python:~=3.8) 2024-05-07T11:04:12,912 Skipping link: No binaries permitted for miniwdl-omics-run: https://files.pythonhosted.org/packages/5e/f9/943646766a302e232f144ea2ef12d73d50b93849b10b9e4498f95658b411/miniwdl_omics_run-0.5.0-py3-none-any.whl (from https://pypi.org/simple/miniwdl-omics-run/) (requires-python:~=3.8) 2024-05-07T11:04:12,913 Found link https://files.pythonhosted.org/packages/4d/2a/1302820eb389071048f36e53561d5735208305c9adc8c10bb7ef67864ba7/miniwdl_omics_run-0.5.0.tar.gz (from https://pypi.org/simple/miniwdl-omics-run/) (requires-python:~=3.8), version: 0.5.0 2024-05-07T11:04:12,914 Fetching project page and analyzing links: https://www.piwheels.org/simple/miniwdl-omics-run/ 2024-05-07T11:04:12,915 Getting page https://www.piwheels.org/simple/miniwdl-omics-run/ 2024-05-07T11:04:12,916 Found index url https://www.piwheels.org/simple/ 2024-05-07T11:04:13,088 Fetched page https://www.piwheels.org/simple/miniwdl-omics-run/ as text/html 2024-05-07T11:04:13,090 Skipping link: No binaries permitted for miniwdl-omics-run: https://www.piwheels.org/simple/miniwdl-omics-run/miniwdl_omics_run-0.4.0-py3-none-any.whl#sha256=4c2de0fcb41a6ee31d037641c12d2d3c387c070d912909829a37bbe2f7e5e715 (from https://www.piwheels.org/simple/miniwdl-omics-run/) (requires-python:~=3.8) 2024-05-07T11:04:13,091 Skipping link: No binaries permitted for miniwdl-omics-run: https://www.piwheels.org/simple/miniwdl-omics-run/miniwdl_omics_run-0.3.0-py3-none-any.whl#sha256=0e31704ecbec1498db3610d92a88b18beb5ece25bb5792d6ee7ab155f386004c (from https://www.piwheels.org/simple/miniwdl-omics-run/) (requires-python:~=3.8) 2024-05-07T11:04:13,092 Skipping link: No binaries permitted for miniwdl-omics-run: https://www.piwheels.org/simple/miniwdl-omics-run/miniwdl_omics_run-0.2.0-py3-none-any.whl#sha256=51a7df882991c72a2c63192954bccc68d1daf684bc27ed8a4eef1bfe5cfca861 (from https://www.piwheels.org/simple/miniwdl-omics-run/) (requires-python:~=3.8) 2024-05-07T11:04:13,092 Skipping link: No binaries permitted for miniwdl-omics-run: https://www.piwheels.org/simple/miniwdl-omics-run/miniwdl_omics_run-0.1.0-py3-none-any.whl#sha256=01a957cfb9f909e7d2833f2184e5acb5fff2b89022e6bc6b6e8f395b820a5cad (from https://www.piwheels.org/simple/miniwdl-omics-run/) (requires-python:~=3.8) 2024-05-07T11:04:13,093 Skipping link: not a file: https://www.piwheels.org/simple/miniwdl-omics-run/ 2024-05-07T11:04:13,093 Skipping link: not a file: https://pypi.org/simple/miniwdl-omics-run/ 2024-05-07T11:04:13,112 Given no hashes to check 1 links for project 'miniwdl-omics-run': discarding no candidates 2024-05-07T11:04:13,130 Collecting miniwdl-omics-run==0.5.0 2024-05-07T11:04:13,132 Created temporary directory: /tmp/pip-unpack-d72dllye 2024-05-07T11:04:13,342 Downloading miniwdl_omics_run-0.5.0.tar.gz (10 kB) 2024-05-07T11:04:13,382 Added miniwdl-omics-run==0.5.0 from https://files.pythonhosted.org/packages/4d/2a/1302820eb389071048f36e53561d5735208305c9adc8c10bb7ef67864ba7/miniwdl_omics_run-0.5.0.tar.gz to build tracker '/tmp/pip-build-tracker-fanc9iyw' 2024-05-07T11:04:13,387 Created temporary directory: /tmp/pip-build-env-ntxovu9_ 2024-05-07T11:04:13,391 Installing build dependencies: started 2024-05-07T11:04:13,393 Running command pip subprocess to install build dependencies 2024-05-07T11:04:14,545 Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-05-07T11:04:15,045 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-05-07T11:04:16,902 Collecting setuptools 2024-05-07T11:04:16,916 Using cached https://www.piwheels.org/simple/setuptools/setuptools-69.5.1-py3-none-any.whl (894 kB) 2024-05-07T11:04:17,219 Collecting setuptools-scm 2024-05-07T11:04:17,220 Obtaining dependency information for setuptools-scm from https://files.pythonhosted.org/packages/a0/b9/1906bfeb30f2fc13bb39bf7ddb8749784c05faadbd18a21cf141ba37bff2/setuptools_scm-8.1.0-py3-none-any.whl.metadata 2024-05-07T11:04:17,225 Using cached setuptools_scm-8.1.0-py3-none-any.whl.metadata (6.6 kB) 2024-05-07T11:04:17,606 Collecting packaging>=20 (from setuptools-scm) 2024-05-07T11:04:17,619 Using cached https://www.piwheels.org/simple/packaging/packaging-24.0-py3-none-any.whl (53 kB) 2024-05-07T11:04:17,637 Using cached setuptools_scm-8.1.0-py3-none-any.whl (43 kB) 2024-05-07T11:04:20,323 Installing collected packages: setuptools, packaging, setuptools-scm 2024-05-07T11:04:23,133 Successfully installed packaging-24.0 setuptools-69.5.1 setuptools-scm-8.1.0 2024-05-07T11:04:23,637 Installing build dependencies: finished with status 'done' 2024-05-07T11:04:23,640 Getting requirements to build wheel: started 2024-05-07T11:04:23,641 Running command Getting requirements to build wheel 2024-05-07T11:04:24,295 No `packages` or `py_modules` configuration, performing automatic discovery. 2024-05-07T11:04:24,296 `flat-layout` detected -- analysing . 2024-05-07T11:04:24,310 discovered packages -- ['miniwdl_omics_run'] 2024-05-07T11:04:24,526 running egg_info 2024-05-07T11:04:24,531 writing miniwdl_omics_run.egg-info/PKG-INFO 2024-05-07T11:04:24,536 writing dependency_links to miniwdl_omics_run.egg-info/dependency_links.txt 2024-05-07T11:04:24,538 writing entry points to miniwdl_omics_run.egg-info/entry_points.txt 2024-05-07T11:04:24,540 writing requirements to miniwdl_omics_run.egg-info/requires.txt 2024-05-07T11:04:24,542 writing top-level names to miniwdl_omics_run.egg-info/top_level.txt 2024-05-07T11:04:24,577 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-05-07T11:04:24,580 reading manifest file 'miniwdl_omics_run.egg-info/SOURCES.txt' 2024-05-07T11:04:24,582 adding license file 'LICENSE' 2024-05-07T11:04:24,584 writing manifest file 'miniwdl_omics_run.egg-info/SOURCES.txt' 2024-05-07T11:04:24,706 Getting requirements to build wheel: finished with status 'done' 2024-05-07T11:04:24,718 Installing backend dependencies: started 2024-05-07T11:04:24,719 Running command pip subprocess to install backend dependencies 2024-05-07T11:04:25,861 Using pip 24.0 from /usr/local/lib/python3.11/dist-packages/pip (python 3.11) 2024-05-07T11:04:26,356 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-05-07T11:04:26,839 Collecting wheel 2024-05-07T11:04:26,853 Using cached https://www.piwheels.org/simple/wheel/wheel-0.43.0-py3-none-any.whl (65 kB) 2024-05-07T11:04:29,166 Installing collected packages: wheel 2024-05-07T11:04:29,388 Creating /tmp/pip-build-env-ntxovu9_/normal/local/bin 2024-05-07T11:04:29,390 changing mode of /tmp/pip-build-env-ntxovu9_/normal/local/bin/wheel to 755 2024-05-07T11:04:29,402 Successfully installed wheel-0.43.0 2024-05-07T11:04:29,842 Installing backend dependencies: finished with status 'done' 2024-05-07T11:04:29,843 Created temporary directory: /tmp/pip-modern-metadata-9cqu87x_ 2024-05-07T11:04:29,846 Preparing metadata (pyproject.toml): started 2024-05-07T11:04:29,847 Running command Preparing metadata (pyproject.toml) 2024-05-07T11:04:30,457 No `packages` or `py_modules` configuration, performing automatic discovery. 2024-05-07T11:04:30,458 `flat-layout` detected -- analysing . 2024-05-07T11:04:30,473 discovered packages -- ['miniwdl_omics_run'] 2024-05-07T11:04:30,734 running dist_info 2024-05-07T11:04:30,740 creating /tmp/pip-modern-metadata-9cqu87x_/miniwdl_omics_run.egg-info 2024-05-07T11:04:30,745 writing /tmp/pip-modern-metadata-9cqu87x_/miniwdl_omics_run.egg-info/PKG-INFO 2024-05-07T11:04:30,755 writing dependency_links to /tmp/pip-modern-metadata-9cqu87x_/miniwdl_omics_run.egg-info/dependency_links.txt 2024-05-07T11:04:30,756 writing entry points to /tmp/pip-modern-metadata-9cqu87x_/miniwdl_omics_run.egg-info/entry_points.txt 2024-05-07T11:04:30,759 writing requirements to /tmp/pip-modern-metadata-9cqu87x_/miniwdl_omics_run.egg-info/requires.txt 2024-05-07T11:04:30,760 writing top-level names to /tmp/pip-modern-metadata-9cqu87x_/miniwdl_omics_run.egg-info/top_level.txt 2024-05-07T11:04:30,761 writing manifest file '/tmp/pip-modern-metadata-9cqu87x_/miniwdl_omics_run.egg-info/SOURCES.txt' 2024-05-07T11:04:30,799 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-05-07T11:04:30,802 reading manifest file '/tmp/pip-modern-metadata-9cqu87x_/miniwdl_omics_run.egg-info/SOURCES.txt' 2024-05-07T11:04:30,804 adding license file 'LICENSE' 2024-05-07T11:04:30,806 writing manifest file '/tmp/pip-modern-metadata-9cqu87x_/miniwdl_omics_run.egg-info/SOURCES.txt' 2024-05-07T11:04:30,808 creating '/tmp/pip-modern-metadata-9cqu87x_/miniwdl_omics_run-0.5.0.dist-info' 2024-05-07T11:04:30,970 Preparing metadata (pyproject.toml): finished with status 'done' 2024-05-07T11:04:30,975 Source in /tmp/pip-wheel-xlemb_ka/miniwdl-omics-run_d0323b8c6e43404b85f037ec4a745cb6 has version 0.5.0, which satisfies requirement miniwdl-omics-run==0.5.0 from https://files.pythonhosted.org/packages/4d/2a/1302820eb389071048f36e53561d5735208305c9adc8c10bb7ef67864ba7/miniwdl_omics_run-0.5.0.tar.gz 2024-05-07T11:04:30,976 Removed miniwdl-omics-run==0.5.0 from https://files.pythonhosted.org/packages/4d/2a/1302820eb389071048f36e53561d5735208305c9adc8c10bb7ef67864ba7/miniwdl_omics_run-0.5.0.tar.gz from build tracker '/tmp/pip-build-tracker-fanc9iyw' 2024-05-07T11:04:30,981 Created temporary directory: /tmp/pip-unpack-howa2tp_ 2024-05-07T11:04:30,982 Created temporary directory: /tmp/pip-unpack-cbqpgr4u 2024-05-07T11:04:31,001 Building wheels for collected packages: miniwdl-omics-run 2024-05-07T11:04:31,005 Created temporary directory: /tmp/pip-wheel-dm_fhqv7 2024-05-07T11:04:31,006 Destination directory: /tmp/pip-wheel-dm_fhqv7 2024-05-07T11:04:31,008 Building wheel for miniwdl-omics-run (pyproject.toml): started 2024-05-07T11:04:31,009 Running command Building wheel for miniwdl-omics-run (pyproject.toml) 2024-05-07T11:04:31,593 No `packages` or `py_modules` configuration, performing automatic discovery. 2024-05-07T11:04:31,593 `flat-layout` detected -- analysing . 2024-05-07T11:04:31,608 discovered packages -- ['miniwdl_omics_run'] 2024-05-07T11:04:31,848 running bdist_wheel 2024-05-07T11:04:31,870 running build 2024-05-07T11:04:31,870 running build_py 2024-05-07T11:04:31,876 creating build 2024-05-07T11:04:31,876 creating build/lib 2024-05-07T11:04:31,877 creating build/lib/miniwdl_omics_run 2024-05-07T11:04:31,878 copying miniwdl_omics_run/__init__.py -> build/lib/miniwdl_omics_run 2024-05-07T11:04:31,880 copying miniwdl_omics_run/__main__.py -> build/lib/miniwdl_omics_run 2024-05-07T11:04:31,882 copying miniwdl_omics_run/_version.py -> build/lib/miniwdl_omics_run 2024-05-07T11:04:31,884 running egg_info 2024-05-07T11:04:31,888 writing miniwdl_omics_run.egg-info/PKG-INFO 2024-05-07T11:04:31,893 writing dependency_links to miniwdl_omics_run.egg-info/dependency_links.txt 2024-05-07T11:04:31,895 writing entry points to miniwdl_omics_run.egg-info/entry_points.txt 2024-05-07T11:04:31,897 writing requirements to miniwdl_omics_run.egg-info/requires.txt 2024-05-07T11:04:31,898 writing top-level names to miniwdl_omics_run.egg-info/top_level.txt 2024-05-07T11:04:31,926 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-05-07T11:04:31,929 reading manifest file 'miniwdl_omics_run.egg-info/SOURCES.txt' 2024-05-07T11:04:31,931 adding license file 'LICENSE' 2024-05-07T11:04:31,933 writing manifest file 'miniwdl_omics_run.egg-info/SOURCES.txt' 2024-05-07T11:04:31,944 installing to build/bdist.linux-armv7l/wheel 2024-05-07T11:04:31,945 running install 2024-05-07T11:04:31,969 running install_lib 2024-05-07T11:04:31,974 creating build/bdist.linux-armv7l 2024-05-07T11:04:31,975 creating build/bdist.linux-armv7l/wheel 2024-05-07T11:04:31,977 creating build/bdist.linux-armv7l/wheel/miniwdl_omics_run 2024-05-07T11:04:31,978 copying build/lib/miniwdl_omics_run/__init__.py -> build/bdist.linux-armv7l/wheel/miniwdl_omics_run 2024-05-07T11:04:31,980 copying build/lib/miniwdl_omics_run/__main__.py -> build/bdist.linux-armv7l/wheel/miniwdl_omics_run 2024-05-07T11:04:31,982 copying build/lib/miniwdl_omics_run/_version.py -> build/bdist.linux-armv7l/wheel/miniwdl_omics_run 2024-05-07T11:04:31,983 running install_egg_info 2024-05-07T11:04:31,988 Copying miniwdl_omics_run.egg-info to build/bdist.linux-armv7l/wheel/miniwdl_omics_run-0.5.0-py3.11.egg-info 2024-05-07T11:04:31,999 running install_scripts 2024-05-07T11:04:32,015 creating build/bdist.linux-armv7l/wheel/miniwdl_omics_run-0.5.0.dist-info/WHEEL 2024-05-07T11:04:32,018 creating '/tmp/pip-wheel-dm_fhqv7/.tmp-ykvq3m6w/miniwdl_omics_run-0.5.0-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-05-07T11:04:32,020 adding 'miniwdl_omics_run/__init__.py' 2024-05-07T11:04:32,022 adding 'miniwdl_omics_run/__main__.py' 2024-05-07T11:04:32,024 adding 'miniwdl_omics_run/_version.py' 2024-05-07T11:04:32,026 adding 'miniwdl_omics_run-0.5.0.dist-info/LICENSE' 2024-05-07T11:04:32,027 adding 'miniwdl_omics_run-0.5.0.dist-info/METADATA' 2024-05-07T11:04:32,028 adding 'miniwdl_omics_run-0.5.0.dist-info/WHEEL' 2024-05-07T11:04:32,029 adding 'miniwdl_omics_run-0.5.0.dist-info/entry_points.txt' 2024-05-07T11:04:32,030 adding 'miniwdl_omics_run-0.5.0.dist-info/top_level.txt' 2024-05-07T11:04:32,031 adding 'miniwdl_omics_run-0.5.0.dist-info/RECORD' 2024-05-07T11:04:32,033 removing build/bdist.linux-armv7l/wheel 2024-05-07T11:04:32,164 Building wheel for miniwdl-omics-run (pyproject.toml): finished with status 'done' 2024-05-07T11:04:32,168 Created wheel for miniwdl-omics-run: filename=miniwdl_omics_run-0.5.0-py3-none-any.whl size=9275 sha256=ff336baf0ae0b548379685a85260e78dff0e3e82f8646fbf6db487c967fcb642 2024-05-07T11:04:32,169 Stored in directory: /tmp/pip-ephem-wheel-cache-hau858zi/wheels/0c/d0/c2/33a5034f0e86ad2916fd8a9065ae43723b594bd1583c9c24bd 2024-05-07T11:04:32,179 Successfully built miniwdl-omics-run 2024-05-07T11:04:32,182 Removed build tracker: '/tmp/pip-build-tracker-fanc9iyw'