2024-05-07T12:28:55,000 Created temporary directory: /tmp/pip-build-tracker-4eg5on0k
2024-05-07T12:28:55,001 Initialized build tracking at /tmp/pip-build-tracker-4eg5on0k
2024-05-07T12:28:55,002 Created build tracker: /tmp/pip-build-tracker-4eg5on0k
2024-05-07T12:28:55,002 Entered build tracker: /tmp/pip-build-tracker-4eg5on0k
2024-05-07T12:28:55,003 Created temporary directory: /tmp/pip-wheel-tvuce5a3
2024-05-07T12:28:55,006 Created temporary directory: /tmp/pip-ephem-wheel-cache-a05bgktc
2024-05-07T12:28:55,029 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple
2024-05-07T12:28:55,032 2 location(s) to search for versions of stcat:
2024-05-07T12:28:55,032 * https://pypi.org/simple/stcat/
2024-05-07T12:28:55,032 * https://www.piwheels.org/simple/stcat/
2024-05-07T12:28:55,033 Fetching project page and analyzing links: https://pypi.org/simple/stcat/
2024-05-07T12:28:55,034 Getting page https://pypi.org/simple/stcat/
2024-05-07T12:28:55,035 Found index url https://pypi.org/simple/
2024-05-07T12:28:55,247 Fetched page https://pypi.org/simple/stcat/ as application/vnd.pypi.simple.v1+json
2024-05-07T12:28:55,250   Skipping link: No binaries permitted for stcat: https://files.pythonhosted.org/packages/dd/d9/7509763cc9a3235091c79b0b4a3a9a415f7b643a68593550ab533d06677d/STCAT-0.2-py3-none-any.whl (from https://pypi.org/simple/stcat/) (requires-python:>=3.8)
2024-05-07T12:28:55,251   Found link https://files.pythonhosted.org/packages/54/ff/46d805ee24659e6c5896441d6a58a39f48af44e54ab5496acf66a564fbc2/STCAT-0.2.tar.gz (from https://pypi.org/simple/stcat/) (requires-python:>=3.8), version: 0.2
2024-05-07T12:28:55,252   Skipping link: No binaries permitted for stcat: https://files.pythonhosted.org/packages/a1/c2/622b9f058b24687ff867af676fe1a228e5ce888299d80fb946f23947d90b/STCAT-0.3-py3-none-any.whl (from https://pypi.org/simple/stcat/) (requires-python:>=3.8)
2024-05-07T12:28:55,253   Found link https://files.pythonhosted.org/packages/0a/80/6f95d103fabcc905d1f3752b8df72f6f94bbee03d856fea3b87d6734399e/STCAT-0.3.tar.gz (from https://pypi.org/simple/stcat/) (requires-python:>=3.8), version: 0.3
2024-05-07T12:28:55,253   Skipping link: No binaries permitted for stcat: https://files.pythonhosted.org/packages/00/9f/c43fc909bbaa04cc23ab22dce4347ba97041c75509b1ad05cb32208af304/STCAT-0.3.1-py3-none-any.whl (from https://pypi.org/simple/stcat/) (requires-python:>=3.8)
2024-05-07T12:28:55,254   Found link https://files.pythonhosted.org/packages/3d/85/26de4a35d00621ab453aec285423cd2d8dcd8894aed6c104efd051548eb2/STCAT-0.3.1.tar.gz (from https://pypi.org/simple/stcat/) (requires-python:>=3.8), version: 0.3.1
2024-05-07T12:28:55,255   Skipping link: No binaries permitted for stcat: https://files.pythonhosted.org/packages/82/30/81637812215bbf231cfcde640e3e9b6d9c2f03ca047ee35e4da2f00451ef/STCAT-0.4-py3-none-any.whl (from https://pypi.org/simple/stcat/) (requires-python:>=3.8)
2024-05-07T12:28:55,256   Found link https://files.pythonhosted.org/packages/b1/2c/d5c45eed6a58face4a30c3d86a73f9ecf36428a3c1dba4e8261ee8b49491/STCAT-0.4.tar.gz (from https://pypi.org/simple/stcat/) (requires-python:>=3.8), version: 0.4
2024-05-07T12:28:55,257   Skipping link: No binaries permitted for stcat: https://files.pythonhosted.org/packages/c0/e2/4eb4ba85784764e9f06ff3e3ea3984483797409d9dbb78bac2bc72aefcda/STCAT-0.5-py3-none-any.whl (from https://pypi.org/simple/stcat/) (requires-python:>=3.8)
2024-05-07T12:28:55,258   Found link https://files.pythonhosted.org/packages/63/4b/4c69ba9d101bddf6c744e6b95d7dd1baf70bfdca8f35d5d3d699286c9818/STCAT-0.5.tar.gz (from https://pypi.org/simple/stcat/) (requires-python:>=3.8), version: 0.5
2024-05-07T12:28:55,258 Fetching project page and analyzing links: https://www.piwheels.org/simple/stcat/
2024-05-07T12:28:55,259 Getting page https://www.piwheels.org/simple/stcat/
2024-05-07T12:28:55,260 Found index url https://www.piwheels.org/simple/
2024-05-07T12:28:55,416 Fetched page https://www.piwheels.org/simple/stcat/ as text/html
2024-05-07T12:28:55,418   Skipping link: No binaries permitted for stcat: https://www.piwheels.org/simple/stcat/STCAT-0.3.1-py3-none-any.whl#sha256=9222fb8e2c8a9b3ced6fcf927634943d0a8ff963cf28ca70f0f85907bb76dcf2 (from https://www.piwheels.org/simple/stcat/) (requires-python:>=3.8)
2024-05-07T12:28:55,419   Skipping link: No binaries permitted for stcat: https://www.piwheels.org/simple/stcat/STCAT-0.3-py3-none-any.whl#sha256=09afd386b49d2f718b124e55b00afc7b12430010014558c7d7df34f006324d19 (from https://www.piwheels.org/simple/stcat/) (requires-python:>=3.8)
2024-05-07T12:28:55,421   Skipping link: No binaries permitted for stcat: https://www.piwheels.org/simple/stcat/STCAT-0.2-py3-none-any.whl#sha256=faf26d207bd572f5fad92b52dcd16f0d45056fa51631366657ba80adc9e9f1ff (from https://www.piwheels.org/simple/stcat/) (requires-python:>=3.8)
2024-05-07T12:28:55,421 Skipping link: not a file: https://www.piwheels.org/simple/stcat/
2024-05-07T12:28:55,422 Skipping link: not a file: https://pypi.org/simple/stcat/
2024-05-07T12:28:55,441 Given no hashes to check 1 links for project 'stcat': discarding no candidates
2024-05-07T12:28:55,459 Collecting stcat==0.4
2024-05-07T12:28:55,461   Created temporary directory: /tmp/pip-unpack-0tzvhbik
2024-05-07T12:28:55,679   Downloading STCAT-0.4.tar.gz (1.7 MB)
2024-05-07T12:28:56,051   Added stcat==0.4 from https://files.pythonhosted.org/packages/b1/2c/d5c45eed6a58face4a30c3d86a73f9ecf36428a3c1dba4e8261ee8b49491/STCAT-0.4.tar.gz to build tracker '/tmp/pip-build-tracker-4eg5on0k'
2024-05-07T12:28:56,053   Running setup.py (path:/tmp/pip-wheel-tvuce5a3/stcat_7d838b15172f47b48307bfbebb5dec64/setup.py) egg_info for package stcat
2024-05-07T12:28:56,054   Created temporary directory: /tmp/pip-pip-egg-info-barcizxy
2024-05-07T12:28:56,055   Preparing metadata (setup.py): started
2024-05-07T12:28:56,056   Running command python setup.py egg_info
2024-05-07T12:28:57,207   running egg_info
2024-05-07T12:28:57,208   creating /tmp/pip-pip-egg-info-barcizxy/STCAT.egg-info
2024-05-07T12:28:57,234   writing /tmp/pip-pip-egg-info-barcizxy/STCAT.egg-info/PKG-INFO
2024-05-07T12:28:57,237   writing dependency_links to /tmp/pip-pip-egg-info-barcizxy/STCAT.egg-info/dependency_links.txt
2024-05-07T12:28:57,240   writing requirements to /tmp/pip-pip-egg-info-barcizxy/STCAT.egg-info/requires.txt
2024-05-07T12:28:57,242   writing top-level names to /tmp/pip-pip-egg-info-barcizxy/STCAT.egg-info/top_level.txt
2024-05-07T12:28:57,243   writing manifest file '/tmp/pip-pip-egg-info-barcizxy/STCAT.egg-info/SOURCES.txt'
2024-05-07T12:28:57,326   reading manifest file '/tmp/pip-pip-egg-info-barcizxy/STCAT.egg-info/SOURCES.txt'
2024-05-07T12:28:57,327   reading manifest template 'MANIFEST.in'
2024-05-07T12:28:57,333   writing manifest file '/tmp/pip-pip-egg-info-barcizxy/STCAT.egg-info/SOURCES.txt'
2024-05-07T12:28:57,452   Preparing metadata (setup.py): finished with status 'done'
2024-05-07T12:28:57,456   Source in /tmp/pip-wheel-tvuce5a3/stcat_7d838b15172f47b48307bfbebb5dec64 has version 0.4, which satisfies requirement stcat==0.4 from https://files.pythonhosted.org/packages/b1/2c/d5c45eed6a58face4a30c3d86a73f9ecf36428a3c1dba4e8261ee8b49491/STCAT-0.4.tar.gz
2024-05-07T12:28:57,457   Removed stcat==0.4 from https://files.pythonhosted.org/packages/b1/2c/d5c45eed6a58face4a30c3d86a73f9ecf36428a3c1dba4e8261ee8b49491/STCAT-0.4.tar.gz from build tracker '/tmp/pip-build-tracker-4eg5on0k'
2024-05-07T12:28:57,463 Created temporary directory: /tmp/pip-unpack-okni3zfz
2024-05-07T12:28:57,464 Created temporary directory: /tmp/pip-unpack-a69_wi3k
2024-05-07T12:28:57,475 Building wheels for collected packages: stcat
2024-05-07T12:28:57,479   Created temporary directory: /tmp/pip-wheel-ou_txa3y
2024-05-07T12:28:57,480   Building wheel for stcat (setup.py): started
2024-05-07T12:28:57,481   Destination directory: /tmp/pip-wheel-ou_txa3y
2024-05-07T12:28:57,482   Running command python setup.py bdist_wheel
2024-05-07T12:28:58,625   running bdist_wheel
2024-05-07T12:28:58,726   running build
2024-05-07T12:28:58,727   running build_py
2024-05-07T12:28:58,754   creating build
2024-05-07T12:28:58,755   creating build/lib
2024-05-07T12:28:58,756   creating build/lib/STCAT
2024-05-07T12:28:58,757   copying STCAT/models.py -> build/lib/STCAT
2024-05-07T12:28:58,760   copying STCAT/__init__.py -> build/lib/STCAT
2024-05-07T12:28:58,762   copying STCAT/classifier.py -> build/lib/STCAT
2024-05-07T12:28:58,764   copying STCAT/annotate.py -> build/lib/STCAT
2024-05-07T12:28:58,766   copying STCAT/STCAT.py -> build/lib/STCAT
2024-05-07T12:28:58,769   copying STCAT/logger.py -> build/lib/STCAT
2024-05-07T12:28:58,770   running egg_info
2024-05-07T12:28:58,846   writing STCAT.egg-info/PKG-INFO
2024-05-07T12:28:58,849   writing dependency_links to STCAT.egg-info/dependency_links.txt
2024-05-07T12:28:58,850   writing requirements to STCAT.egg-info/requires.txt
2024-05-07T12:28:58,851   writing top-level names to STCAT.egg-info/top_level.txt
2024-05-07T12:28:58,879   reading manifest file 'STCAT.egg-info/SOURCES.txt'
2024-05-07T12:28:58,881   reading manifest template 'MANIFEST.in'
2024-05-07T12:28:58,886   writing manifest file 'STCAT.egg-info/SOURCES.txt'
2024-05-07T12:28:58,888   /usr/local/lib/python3.11/dist-packages/setuptools/command/build_py.py:207: _Warning: Package 'STCAT.data' is absent from the `packages` configuration.
2024-05-07T12:28:58,889   !!

2024-05-07T12:28:58,890           ********************************************************************************
2024-05-07T12:28:58,890           ############################
2024-05-07T12:28:58,891           # Package would be ignored #
2024-05-07T12:28:58,891           ############################
2024-05-07T12:28:58,891           Python recognizes 'STCAT.data' as an importable package[^1],
2024-05-07T12:28:58,892           but it is absent from setuptools' `packages` configuration.

2024-05-07T12:28:58,893           This leads to an ambiguous overall configuration. If you want to distribute this
2024-05-07T12:28:58,893           package, please make sure that 'STCAT.data' is explicitly added
2024-05-07T12:28:58,894           to the `packages` configuration field.

2024-05-07T12:28:58,895           Alternatively, you can also rely on setuptools' discovery methods
2024-05-07T12:28:58,896           (for example by using `find_namespace_packages(...)`/`find_namespace:`
2024-05-07T12:28:58,897           instead of `find_packages(...)`/`find:`).

2024-05-07T12:28:58,901           You can read more about "package discovery" on setuptools documentation page:

2024-05-07T12:28:58,905           - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html

2024-05-07T12:28:58,910           If you don't want 'STCAT.data' to be distributed and are
2024-05-07T12:28:58,911           already explicitly excluding 'STCAT.data' via
2024-05-07T12:28:58,912           `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
2024-05-07T12:28:58,912           you can try to use `exclude_package_data`, or `include-package-data=False` in
2024-05-07T12:28:58,913           combination with a more fine grained `package-data` configuration.

2024-05-07T12:28:58,914           You can read more about "package data files" on setuptools documentation page:

2024-05-07T12:28:58,915           - https://setuptools.pypa.io/en/latest/userguide/datafiles.html


2024-05-07T12:28:58,924           [^1]: For Python, any directory (with suitable naming) can be imported,
2024-05-07T12:28:58,925                 even if it does not contain any `.py` files.
2024-05-07T12:28:58,926                 On the other hand, currently there is no concept of package data
2024-05-07T12:28:58,926                 directory, all directories are treated like packages.
2024-05-07T12:28:58,931           ********************************************************************************

2024-05-07T12:28:58,934   !!
2024-05-07T12:28:58,934     check.warn(importable)
2024-05-07T12:28:58,935   creating build/lib/STCAT/data
2024-05-07T12:28:58,936   copying STCAT/data/T_cell.pkl -> build/lib/STCAT/data
2024-05-07T12:28:58,936   copying STCAT/data/cd4.pkl -> build/lib/STCAT/data
2024-05-07T12:28:58,937   copying STCAT/data/cd8.pkl -> build/lib/STCAT/data
2024-05-07T12:28:58,938   copying STCAT/data/marker_CD4.txt -> build/lib/STCAT/data
2024-05-07T12:28:58,938   copying STCAT/data/marker_CD8.txt -> build/lib/STCAT/data
2024-05-07T12:28:58,965   /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
2024-05-07T12:28:58,966   !!

2024-05-07T12:28:58,967           ********************************************************************************
2024-05-07T12:28:58,967           Please avoid running ``setup.py`` directly.
2024-05-07T12:28:58,967           Instead, use pypa/build, pypa/installer or other
2024-05-07T12:28:58,968           standards-based tools.

2024-05-07T12:28:58,969           See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
2024-05-07T12:28:58,969           ********************************************************************************

2024-05-07T12:28:58,970   !!
2024-05-07T12:28:58,971     self.initialize_options()
2024-05-07T12:28:58,991   installing to build/bdist.linux-armv7l/wheel
2024-05-07T12:28:58,992   running install
2024-05-07T12:28:59,016   running install_lib
2024-05-07T12:28:59,040   creating build/bdist.linux-armv7l
2024-05-07T12:28:59,041   creating build/bdist.linux-armv7l/wheel
2024-05-07T12:28:59,042   creating build/bdist.linux-armv7l/wheel/STCAT
2024-05-07T12:28:59,043   copying build/lib/STCAT/models.py -> build/bdist.linux-armv7l/wheel/STCAT
2024-05-07T12:28:59,045   copying build/lib/STCAT/__init__.py -> build/bdist.linux-armv7l/wheel/STCAT
2024-05-07T12:28:59,047   copying build/lib/STCAT/classifier.py -> build/bdist.linux-armv7l/wheel/STCAT
2024-05-07T12:28:59,050   copying build/lib/STCAT/annotate.py -> build/bdist.linux-armv7l/wheel/STCAT
2024-05-07T12:28:59,053   copying build/lib/STCAT/STCAT.py -> build/bdist.linux-armv7l/wheel/STCAT
2024-05-07T12:28:59,055   copying build/lib/STCAT/logger.py -> build/bdist.linux-armv7l/wheel/STCAT
2024-05-07T12:28:59,057   creating build/bdist.linux-armv7l/wheel/STCAT/data
2024-05-07T12:28:59,058   copying build/lib/STCAT/data/marker_CD4.txt -> build/bdist.linux-armv7l/wheel/STCAT/data
2024-05-07T12:28:59,061   copying build/lib/STCAT/data/marker_CD8.txt -> build/bdist.linux-armv7l/wheel/STCAT/data
2024-05-07T12:28:59,063   copying build/lib/STCAT/data/T_cell.pkl -> build/bdist.linux-armv7l/wheel/STCAT/data
2024-05-07T12:28:59,085   copying build/lib/STCAT/data/cd4.pkl -> build/bdist.linux-armv7l/wheel/STCAT/data
2024-05-07T12:28:59,100   copying build/lib/STCAT/data/cd8.pkl -> build/bdist.linux-armv7l/wheel/STCAT/data
2024-05-07T12:28:59,106   running install_egg_info
2024-05-07T12:28:59,137   Copying STCAT.egg-info to build/bdist.linux-armv7l/wheel/STCAT-0.4-py3.11.egg-info
2024-05-07T12:28:59,147   running install_scripts
2024-05-07T12:28:59,160   creating build/bdist.linux-armv7l/wheel/STCAT-0.4.dist-info/WHEEL
2024-05-07T12:28:59,162   creating '/tmp/pip-wheel-ou_txa3y/STCAT-0.4-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it
2024-05-07T12:28:59,166   adding 'STCAT/STCAT.py'
2024-05-07T12:28:59,167   adding 'STCAT/__init__.py'
2024-05-07T12:28:59,169   adding 'STCAT/annotate.py'
2024-05-07T12:28:59,173   adding 'STCAT/classifier.py'
2024-05-07T12:28:59,174   adding 'STCAT/logger.py'
2024-05-07T12:28:59,176   adding 'STCAT/models.py'
2024-05-07T12:28:59,327   adding 'STCAT/data/T_cell.pkl'
2024-05-07T12:28:59,415   adding 'STCAT/data/cd4.pkl'
2024-05-07T12:28:59,460   adding 'STCAT/data/cd8.pkl'
2024-05-07T12:28:59,464   adding 'STCAT/data/marker_CD4.txt'
2024-05-07T12:28:59,466   adding 'STCAT/data/marker_CD8.txt'
2024-05-07T12:28:59,468   adding 'STCAT-0.4.dist-info/METADATA'
2024-05-07T12:28:59,470   adding 'STCAT-0.4.dist-info/WHEEL'
2024-05-07T12:28:59,471   adding 'STCAT-0.4.dist-info/top_level.txt'
2024-05-07T12:28:59,472   adding 'STCAT-0.4.dist-info/RECORD'
2024-05-07T12:28:59,492   removing build/bdist.linux-armv7l/wheel
2024-05-07T12:28:59,621   Building wheel for stcat (setup.py): finished with status 'done'
2024-05-07T12:28:59,641   Created wheel for stcat: filename=STCAT-0.4-py3-none-any.whl size=1709916 sha256=1fc9535179dab13c6c61b1b6e2fcd1bd257776472eb6c91d94140ae9d3194adb
2024-05-07T12:28:59,642   Stored in directory: /tmp/pip-ephem-wheel-cache-a05bgktc/wheels/6e/93/07/534504d071a12a6d1431a3f83e09b2bffacc3b034dcf8d1c9a
2024-05-07T12:28:59,653 Successfully built stcat
2024-05-07T12:28:59,700 Removed build tracker: '/tmp/pip-build-tracker-4eg5on0k'