2024-05-07T18:14:58,002 Created temporary directory: /tmp/pip-build-tracker-wixgfvbs 2024-05-07T18:14:58,003 Initialized build tracking at /tmp/pip-build-tracker-wixgfvbs 2024-05-07T18:14:58,004 Created build tracker: /tmp/pip-build-tracker-wixgfvbs 2024-05-07T18:14:58,004 Entered build tracker: /tmp/pip-build-tracker-wixgfvbs 2024-05-07T18:14:58,005 Created temporary directory: /tmp/pip-wheel-xc9kpb8f 2024-05-07T18:14:58,009 Created temporary directory: /tmp/pip-ephem-wheel-cache-egzdtbyx 2024-05-07T18:14:58,032 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-05-07T18:14:58,035 2 location(s) to search for versions of mobspy: 2024-05-07T18:14:58,035 * https://pypi.org/simple/mobspy/ 2024-05-07T18:14:58,035 * https://www.piwheels.org/simple/mobspy/ 2024-05-07T18:14:58,036 Fetching project page and analyzing links: https://pypi.org/simple/mobspy/ 2024-05-07T18:14:58,037 Getting page https://pypi.org/simple/mobspy/ 2024-05-07T18:14:58,038 Found index url https://pypi.org/simple/ 2024-05-07T18:14:58,252 Fetched page https://pypi.org/simple/mobspy/ as application/vnd.pypi.simple.v1+json 2024-05-07T18:14:58,258 Found link https://files.pythonhosted.org/packages/2f/03/165ae021d9a66bed39f8633ccca9a90d39c4b6f1f66d4da35ae3c1735018/mobspy-1.0.2.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 1.0.2 2024-05-07T18:14:58,259 Found link https://files.pythonhosted.org/packages/a4/71/dfc85103aecaeeaf86f226d8f1cd66dae1546eeff44a8182b4b8dd795f00/mobspy-1.0.3.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 1.0.3 2024-05-07T18:14:58,261 Found link https://files.pythonhosted.org/packages/29/5f/4009cc0078cb2521f37a724700a07b84dd835f1e5b172314cc34a46c5d6a/mobspy-1.0.4.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 1.0.4 2024-05-07T18:14:58,262 Found link https://files.pythonhosted.org/packages/fe/59/901ffe8a6d60395c24faa247183ecc54ebe5609824fe95184b21e6d8a197/mobspy-1.0.5.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 1.0.5 2024-05-07T18:14:58,262 Found link https://files.pythonhosted.org/packages/fc/9f/00f7c1c2fdd39b15e3177a1f5e3c9da5b1a1ce5f93503843a7daf1413a3f/mobspy-1.1.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 1.1 2024-05-07T18:14:58,263 Found link https://files.pythonhosted.org/packages/9b/40/0fd96ff71c6023c91d9634ea372a40700b441435ac2abe091f2190d93ab2/mobspy-1.1.2.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 1.1.2 2024-05-07T18:14:58,264 Found link https://files.pythonhosted.org/packages/81/43/2e0789240f94acd1b5aedd491f69dd7559f5206f0906f53c799540ee6ead/mobspy-1.1.3.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 1.1.3 2024-05-07T18:14:58,266 Found link https://files.pythonhosted.org/packages/d1/a8/f6159cb514e4430b16fab1bbe0270ec127cfb3b3603f6c84e1bc5823d75c/mobspy-2.0.1.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 2.0.1 2024-05-07T18:14:58,266 Found link https://files.pythonhosted.org/packages/ea/fc/389bb58d5e87294ec724c28456a3b9be8d59b375f90494797fec4422e4a9/mobspy-2.0.2.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 2.0.2 2024-05-07T18:14:58,267 Found link https://files.pythonhosted.org/packages/4f/19/ae2b85153a6f91cbd12f4b8ed6b0962cfc4d839f3e46f79197163d85140c/mobspy-2.0.3.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 2.0.3 2024-05-07T18:14:58,268 Found link https://files.pythonhosted.org/packages/a0/17/3f377b631bee81a8b91f8e846c63f3c421727f47cf5d0d02c85fb040453d/mobspy-2.0.4.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 2.0.4 2024-05-07T18:14:58,269 Skipping link: No binaries permitted for mobspy: https://files.pythonhosted.org/packages/f2/0a/bebf51fa671fe52c59e5d1290ab2f8946eb57232a98858c54801b141b935/mobspy-2.2.2-py3-none-any.whl (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6) 2024-05-07T18:14:58,270 Found link https://files.pythonhosted.org/packages/7b/53/d63dbeafaa50b8b31161faa261323e7d8a36792a03ac37e30ee90281b0e1/mobspy-2.2.2.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 2.2.2 2024-05-07T18:14:58,271 Skipping link: No binaries permitted for mobspy: https://files.pythonhosted.org/packages/58/d4/832663ae3a7361fb1f6bbc4bf23914b1f4273ce55048cd62927f7c1abe85/mobspy-2.3.0-py3-none-any.whl (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6) 2024-05-07T18:14:58,272 Found link https://files.pythonhosted.org/packages/ad/ae/a4435812cda248f15f71510c5d0632d3da836738c2f55d07bb06f4a822fa/mobspy-2.3.0.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 2.3.0 2024-05-07T18:14:58,273 Skipping link: No binaries permitted for mobspy: https://files.pythonhosted.org/packages/bb/78/5ef23f1ea228b9180fcfe3bcac71482c2f99f425ee862ac97a133a1d2db9/mobspy-2.3.1-py3-none-any.whl (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6) 2024-05-07T18:14:58,274 Found link https://files.pythonhosted.org/packages/ac/2c/2d1f028abd87f5a9bb5af86fd9d3677b11be527dd8615f872bae09882517/mobspy-2.3.1.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 2.3.1 2024-05-07T18:14:58,275 Skipping link: No binaries permitted for mobspy: https://files.pythonhosted.org/packages/8d/89/c8cc955c3c1d2e3cb9e6e76169d241cbee97a7dd6bd33af9ef7bcdc8abdb/mobspy-2.3.2-py3-none-any.whl (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6) 2024-05-07T18:14:58,276 Found link https://files.pythonhosted.org/packages/01/50/41f380bfb10463c55b69e8ff2b457b40325a762000c7cd71283cb950da6f/mobspy-2.3.2.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 2.3.2 2024-05-07T18:14:58,276 Skipping link: No binaries permitted for mobspy: https://files.pythonhosted.org/packages/50/fb/15a2fb782812899432871b9fec75c6ba68d228471f22266663ca8a1429d9/mobspy-2.3.3-py3-none-any.whl (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6) 2024-05-07T18:14:58,277 Found link https://files.pythonhosted.org/packages/4b/77/836c4fb1c01eec4af93d7519b59ae4063ed03a9eb061d2949c28d1d1c684/mobspy-2.3.3.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 2.3.3 2024-05-07T18:14:58,278 Skipping link: No binaries permitted for mobspy: https://files.pythonhosted.org/packages/32/05/a10e0e44fc1d5510a8e1d50ec899b36c00e0eb111bc32ee553023deef6b0/mobspy-2.3.4-py3-none-any.whl (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6) 2024-05-07T18:14:58,278 Found link https://files.pythonhosted.org/packages/cf/df/9853d52e615d56ab73711a49d95ac42a19839d7d59bcf09f37cd6bd05138/mobspy-2.3.4.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 2.3.4 2024-05-07T18:14:58,279 Skipping link: No binaries permitted for mobspy: https://files.pythonhosted.org/packages/1f/a3/9f8a2a9d4dfbb6c799524230b7e5ee6dec5733f1a09d38da406b1b173169/mobspy-2.3.5-py3-none-any.whl (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6) 2024-05-07T18:14:58,280 Found link https://files.pythonhosted.org/packages/94/59/d58373eb3bc152705cb045f1b502494a01873a54756db85a729ef8098d86/mobspy-2.3.5.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 2.3.5 2024-05-07T18:14:58,281 Found link https://files.pythonhosted.org/packages/1d/65/c7752e68db1ca977005aa482c1ca8e7066bd21281074bdbd1a1f7613b09e/mobspy-2.4.0.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 2.4.0 2024-05-07T18:14:58,282 Found link https://files.pythonhosted.org/packages/22/17/cb78ad21fb36f296507fa911e753e2e5ab9c0c89650fd07dee3b82eb242a/mobspy-2.4.1.tar.gz (from https://pypi.org/simple/mobspy/) (requires-python:>=3.6), version: 2.4.1 2024-05-07T18:14:58,283 Fetching project page and analyzing links: https://www.piwheels.org/simple/mobspy/ 2024-05-07T18:14:58,283 Getting page https://www.piwheels.org/simple/mobspy/ 2024-05-07T18:14:58,285 Found index url https://www.piwheels.org/simple/ 2024-05-07T18:14:58,493 Fetched page https://www.piwheels.org/simple/mobspy/ as text/html 2024-05-07T18:14:58,500 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-2.4.0-py3-none-any.whl#sha256=c46ca5d37f91d6cc16fa20631bd2a44f4925dc43446807384d399b5f207e89df (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-05-07T18:14:58,501 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-2.3.5-py3-none-any.whl#sha256=10f5103fd23250f3e8ac31f0916768f1e0259f38a1f587998c0583b427a9bb66 (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-05-07T18:14:58,501 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-2.3.4-py3-none-any.whl#sha256=3fb180fe611954bf23a2791ff45968b82ac5df09d5f1e711abf10b83c5fd5810 (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-05-07T18:14:58,502 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-2.3.3-py3-none-any.whl#sha256=7a6c25dc20108a60bf4f39b403655359d6ca829b8e547f6fbcda0e17401171dd (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-05-07T18:14:58,502 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-2.3.2-py3-none-any.whl#sha256=ce4c2e39eb28ca7f3a207f99776c6f5e5d1ccbf145668ffef052cbb2675fbfe2 (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-05-07T18:14:58,503 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-2.3.1-py3-none-any.whl#sha256=93adf274518c44e6b998213d3747cec60877704ed3dc4ed118eb8b5a6ccc8a5e (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-05-07T18:14:58,503 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-2.3.0-py3-none-any.whl#sha256=993d22161ad2a520897d05dc69fc02a715efe8cd11928478a90659b518638bc5 (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-05-07T18:14:58,504 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-2.2.2-py3-none-any.whl#sha256=25a82b917c096ee0ffd405aa45688f10951bee3a87f043488c5bf947322576e5 (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-05-07T18:14:58,504 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-2.0.4-py3-none-any.whl#sha256=8bc9a86f6a4ca7cf5776d50edf9260aaf33a40e2a21458011a6a59a3ef42aeea (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-05-07T18:14:58,505 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-2.0.3-py3-none-any.whl#sha256=3bd344d4bced113bfa0a5e273d32c2f939295cfc1d00031e51534aacbea94410 (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-05-07T18:14:58,505 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-2.0.2-py3-none-any.whl#sha256=841b9a47734abb27e4abfd98c62bf2057765cefa42de5fdd7203f742621ed402 (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-05-07T18:14:58,506 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-2.0.1-py3-none-any.whl#sha256=f1cdde5da49569b3e9eb9da7e66d0f986ff6435eb6582e71986642c9dee46406 (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-05-07T18:14:58,507 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-1.1.3-py3-none-any.whl#sha256=f9dfd21e9baf95605b4587f404d37481d525796d74750181aaf70139e8674281 (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-05-07T18:14:58,507 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-1.1.2-py3-none-any.whl#sha256=5246e3324739c05f676c64929b6c31d17b1dda6cee4f40c5329747ddbaf8e7ae (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-05-07T18:14:58,507 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-1.1-py3-none-any.whl#sha256=0e28cf39288fac5cbab2bab2cac57499959d72a8691a9d3c54bff36d6e9b6f13 (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-05-07T18:14:58,508 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-1.0.5-py3-none-any.whl#sha256=67684ab1ac59298fbf59be47ad3dfb875c02ee79eceadd7a81c988a93db0fdca (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-05-07T18:14:58,509 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-1.0.4-py3-none-any.whl#sha256=558767d78ceef098c5b73b71062374668cb8c30af92ca0b1e1585933e16cedb9 (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-05-07T18:14:58,510 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-1.0.3-py3-none-any.whl#sha256=ed4231baa2157854447aa2cb5e8ae3607a93ac142e9a8e4b4e439bab5f79cb43 (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-05-07T18:14:58,510 Skipping link: No binaries permitted for mobspy: https://www.piwheels.org/simple/mobspy/mobspy-1.0.2-py3-none-any.whl#sha256=d9200e8562ac99cd9c250a3e8c2b3a6a375d2f36288ff5073d3dd14be9bbfc68 (from https://www.piwheels.org/simple/mobspy/) (requires-python:>=3.6) 2024-05-07T18:14:58,511 Skipping link: not a file: https://www.piwheels.org/simple/mobspy/ 2024-05-07T18:14:58,511 Skipping link: not a file: https://pypi.org/simple/mobspy/ 2024-05-07T18:14:58,532 Given no hashes to check 1 links for project 'mobspy': discarding no candidates 2024-05-07T18:14:58,550 Collecting mobspy==2.4.1 2024-05-07T18:14:58,552 Created temporary directory: /tmp/pip-unpack-6ryikm9l 2024-05-07T18:14:58,767 Downloading mobspy-2.4.1.tar.gz (5.4 MB) 2024-05-07T18:15:00,614 Added mobspy==2.4.1 from https://files.pythonhosted.org/packages/22/17/cb78ad21fb36f296507fa911e753e2e5ab9c0c89650fd07dee3b82eb242a/mobspy-2.4.1.tar.gz to build tracker '/tmp/pip-build-tracker-wixgfvbs' 2024-05-07T18:15:00,616 Running setup.py (path:/tmp/pip-wheel-xc9kpb8f/mobspy_ce269111d1d34464b70c95aa70ad9c64/setup.py) egg_info for package mobspy 2024-05-07T18:15:00,617 Created temporary directory: /tmp/pip-pip-egg-info-ybs_abfc 2024-05-07T18:15:00,617 Preparing metadata (setup.py): started 2024-05-07T18:15:00,619 Running command python setup.py egg_info 2024-05-07T18:15:01,366 /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:81: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2024-05-07T18:15:01,366 !! 2024-05-07T18:15:01,367 ******************************************************************************** 2024-05-07T18:15:01,368 Requirements should be satisfied by a PEP 517 installer. 2024-05-07T18:15:01,369 If you are using pip, you can try `pip install --use-pep517`. 2024-05-07T18:15:01,369 ******************************************************************************** 2024-05-07T18:15:01,371 !! 2024-05-07T18:15:01,371 dist.fetch_build_eggs(dist.setup_requires) 2024-05-07T18:15:05,156 running egg_info 2024-05-07T18:15:05,158 creating /tmp/pip-pip-egg-info-ybs_abfc/mobspy.egg-info 2024-05-07T18:15:05,187 writing /tmp/pip-pip-egg-info-ybs_abfc/mobspy.egg-info/PKG-INFO 2024-05-07T18:15:05,190 writing dependency_links to /tmp/pip-pip-egg-info-ybs_abfc/mobspy.egg-info/dependency_links.txt 2024-05-07T18:15:05,192 writing requirements to /tmp/pip-pip-egg-info-ybs_abfc/mobspy.egg-info/requires.txt 2024-05-07T18:15:05,193 writing top-level names to /tmp/pip-pip-egg-info-ybs_abfc/mobspy.egg-info/top_level.txt 2024-05-07T18:15:05,195 writing manifest file '/tmp/pip-pip-egg-info-ybs_abfc/mobspy.egg-info/SOURCES.txt' 2024-05-07T18:15:05,378 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-05-07T18:15:05,385 reading manifest file '/tmp/pip-pip-egg-info-ybs_abfc/mobspy.egg-info/SOURCES.txt' 2024-05-07T18:15:05,386 adding license file 'LICENSE' 2024-05-07T18:15:05,389 writing manifest file '/tmp/pip-pip-egg-info-ybs_abfc/mobspy.egg-info/SOURCES.txt' 2024-05-07T18:15:05,514 Preparing metadata (setup.py): finished with status 'done' 2024-05-07T18:15:05,518 Source in /tmp/pip-wheel-xc9kpb8f/mobspy_ce269111d1d34464b70c95aa70ad9c64 has version 2.4.1, which satisfies requirement mobspy==2.4.1 from https://files.pythonhosted.org/packages/22/17/cb78ad21fb36f296507fa911e753e2e5ab9c0c89650fd07dee3b82eb242a/mobspy-2.4.1.tar.gz 2024-05-07T18:15:05,519 Removed mobspy==2.4.1 from https://files.pythonhosted.org/packages/22/17/cb78ad21fb36f296507fa911e753e2e5ab9c0c89650fd07dee3b82eb242a/mobspy-2.4.1.tar.gz from build tracker '/tmp/pip-build-tracker-wixgfvbs' 2024-05-07T18:15:05,525 Created temporary directory: /tmp/pip-unpack-b9th1znu 2024-05-07T18:15:05,526 Created temporary directory: /tmp/pip-unpack-hhko6vd3 2024-05-07T18:15:05,539 Building wheels for collected packages: mobspy 2024-05-07T18:15:05,544 Created temporary directory: /tmp/pip-wheel-m5anzedq 2024-05-07T18:15:05,545 Building wheel for mobspy (setup.py): started 2024-05-07T18:15:05,546 Destination directory: /tmp/pip-wheel-m5anzedq 2024-05-07T18:15:05,546 Running command python setup.py bdist_wheel 2024-05-07T18:15:06,281 /usr/local/lib/python3.11/dist-packages/setuptools/__init__.py:81: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. 2024-05-07T18:15:06,281 !! 2024-05-07T18:15:06,282 ******************************************************************************** 2024-05-07T18:15:06,282 Requirements should be satisfied by a PEP 517 installer. 2024-05-07T18:15:06,283 If you are using pip, you can try `pip install --use-pep517`. 2024-05-07T18:15:06,283 ******************************************************************************** 2024-05-07T18:15:06,285 !! 2024-05-07T18:15:06,285 dist.fetch_build_eggs(dist.setup_requires) 2024-05-07T18:15:06,874 running bdist_wheel 2024-05-07T18:15:06,981 running build 2024-05-07T18:15:06,982 running build_py 2024-05-07T18:15:07,011 creating build 2024-05-07T18:15:07,012 creating build/lib 2024-05-07T18:15:07,013 creating build/lib/mobspy 2024-05-07T18:15:07,014 copying mobspy/__init__.py -> build/lib/mobspy 2024-05-07T18:15:07,016 copying mobspy/_version.py -> build/lib/mobspy 2024-05-07T18:15:07,017 copying mobspy/simulation.py -> build/lib/mobspy 2024-05-07T18:15:07,020 creating build/lib/mobspy/sbml_simulator 2024-05-07T18:15:07,021 copying mobspy/sbml_simulator/__init__.py -> build/lib/mobspy/sbml_simulator 2024-05-07T18:15:07,023 copying mobspy/sbml_simulator/run.py -> build/lib/mobspy/sbml_simulator 2024-05-07T18:15:07,025 copying mobspy/sbml_simulator/SBMLWriter.py -> build/lib/mobspy/sbml_simulator 2024-05-07T18:15:07,027 copying mobspy/sbml_simulator/builder.py -> build/lib/mobspy/sbml_simulator 2024-05-07T18:15:07,029 creating build/lib/mobspy/simulation_logging 2024-05-07T18:15:07,030 copying mobspy/simulation_logging/log_scripts.py -> build/lib/mobspy/simulation_logging 2024-05-07T18:15:07,032 copying mobspy/simulation_logging/__init__.py -> build/lib/mobspy/simulation_logging 2024-05-07T18:15:07,034 creating build/lib/mobspy/data_handler 2024-05-07T18:15:07,035 copying mobspy/data_handler/__init__.py -> build/lib/mobspy/data_handler 2024-05-07T18:15:07,036 copying mobspy/data_handler/process_result_data.py -> build/lib/mobspy/data_handler 2024-05-07T18:15:07,039 copying mobspy/data_handler/time_series_object.py -> build/lib/mobspy/data_handler 2024-05-07T18:15:07,042 creating build/lib/mobspy/modules 2024-05-07T18:15:07,043 copying mobspy/modules/context_related_scripts.py -> build/lib/mobspy/modules 2024-05-07T18:15:07,045 copying mobspy/modules/class_of_meta_specie_named_any.py -> build/lib/mobspy/modules 2024-05-07T18:15:07,047 copying mobspy/modules/species_string_generator.py -> build/lib/mobspy/modules 2024-05-07T18:15:07,049 copying mobspy/modules/order_operators.py -> build/lib/mobspy/modules 2024-05-07T18:15:07,051 copying mobspy/modules/assignments_implementation.py -> build/lib/mobspy/modules 2024-05-07T18:15:07,054 copying mobspy/modules/set_counts_module.py -> build/lib/mobspy/modules 2024-05-07T18:15:07,056 copying mobspy/modules/reaction_construction_nb_parallel.py -> build/lib/mobspy/modules 2024-05-07T18:15:07,058 copying mobspy/modules/__init__.py -> build/lib/mobspy/modules 2024-05-07T18:15:07,059 copying mobspy/modules/function_rate_code.py -> build/lib/mobspy/modules 2024-05-07T18:15:07,062 copying mobspy/modules/reaction_construction_nb.py -> build/lib/mobspy/modules 2024-05-07T18:15:07,064 copying mobspy/modules/mobspy_parameters.py -> build/lib/mobspy/modules 2024-05-07T18:15:07,066 copying mobspy/modules/meta_class.py -> build/lib/mobspy/modules 2024-05-07T18:15:07,069 copying mobspy/modules/meta_class_utils.py -> build/lib/mobspy/modules 2024-05-07T18:15:07,071 copying mobspy/modules/event_functions.py -> build/lib/mobspy/modules 2024-05-07T18:15:07,073 copying mobspy/modules/logic_operator_objects.py -> build/lib/mobspy/modules 2024-05-07T18:15:07,075 copying mobspy/modules/user_functions.py -> build/lib/mobspy/modules 2024-05-07T18:15:07,077 copying mobspy/modules/unit_handler.py -> build/lib/mobspy/modules 2024-05-07T18:15:07,079 copying mobspy/modules/mobspy_expressions.py -> build/lib/mobspy/modules 2024-05-07T18:15:07,083 creating build/lib/mobspy/parameter_scripts 2024-05-07T18:15:07,083 copying mobspy/parameter_scripts/parametric_sweeps.py -> build/lib/mobspy/parameter_scripts 2024-05-07T18:15:07,085 copying mobspy/parameter_scripts/__init__.py -> build/lib/mobspy/parameter_scripts 2024-05-07T18:15:07,087 copying mobspy/parameter_scripts/parameter_reader.py -> build/lib/mobspy/parameter_scripts 2024-05-07T18:15:07,089 creating build/lib/mobspy/plot_scripts 2024-05-07T18:15:07,090 copying mobspy/plot_scripts/process_plot_data.py -> build/lib/mobspy/plot_scripts 2024-05-07T18:15:07,092 copying mobspy/plot_scripts/statistics_calculations.py -> build/lib/mobspy/plot_scripts 2024-05-07T18:15:07,094 copying mobspy/plot_scripts/__init__.py -> build/lib/mobspy/plot_scripts 2024-05-07T18:15:07,095 copying mobspy/plot_scripts/default_plots.py -> build/lib/mobspy/plot_scripts 2024-05-07T18:15:07,098 copying mobspy/plot_scripts/hierarchical_plot.py -> build/lib/mobspy/plot_scripts 2024-05-07T18:15:07,101 creating build/lib/mobspy/parameters 2024-05-07T18:15:07,102 copying mobspy/parameters/default_reader.py -> build/lib/mobspy/parameters 2024-05-07T18:15:07,103 copying mobspy/parameters/__init__.py -> build/lib/mobspy/parameters 2024-05-07T18:15:07,105 copying mobspy/parameters/example_reader.py -> build/lib/mobspy/parameters 2024-05-07T18:15:07,107 creating build/lib/mobspy/patch_scripts 2024-05-07T18:15:07,108 copying mobspy/patch_scripts/basico_task_parametrization.py -> build/lib/mobspy/patch_scripts 2024-05-07T18:15:07,112 copying mobspy/patch_scripts/__init__.py -> build/lib/mobspy/patch_scripts 2024-05-07T18:15:07,113 creating build/lib/mobspy/parameter_estimation_data_loader 2024-05-07T18:15:07,115 copying mobspy/parameter_estimation_data_loader/parameter_estimation_scripts.py -> build/lib/mobspy/parameter_estimation_data_loader 2024-05-07T18:15:07,117 copying mobspy/parameter_estimation_data_loader/__init__.py -> build/lib/mobspy/parameter_estimation_data_loader 2024-05-07T18:15:07,118 copying mobspy/parameter_estimation_data_loader/data_loader.py -> build/lib/mobspy/parameter_estimation_data_loader 2024-05-07T18:15:07,120 creating build/lib/mobspy/plot_params 2024-05-07T18:15:07,121 copying mobspy/plot_params/__init__.py -> build/lib/mobspy/plot_params 2024-05-07T18:15:07,123 copying mobspy/plot_params/default_plot_reader.py -> build/lib/mobspy/plot_params 2024-05-07T18:15:07,125 copying mobspy/plot_params/example_plot_reader.py -> build/lib/mobspy/plot_params 2024-05-07T18:15:07,164 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-05-07T18:15:07,165 !! 2024-05-07T18:15:07,166 ******************************************************************************** 2024-05-07T18:15:07,166 Please avoid running ``setup.py`` directly. 2024-05-07T18:15:07,167 Instead, use pypa/build, pypa/installer or other 2024-05-07T18:15:07,167 standards-based tools. 2024-05-07T18:15:07,168 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-05-07T18:15:07,169 ******************************************************************************** 2024-05-07T18:15:07,169 !! 2024-05-07T18:15:07,170 self.initialize_options() 2024-05-07T18:15:07,192 installing to build/bdist.linux-armv7l/wheel 2024-05-07T18:15:07,192 running install 2024-05-07T18:15:07,217 running install_lib 2024-05-07T18:15:07,244 creating build/bdist.linux-armv7l 2024-05-07T18:15:07,244 creating build/bdist.linux-armv7l/wheel 2024-05-07T18:15:07,246 creating build/bdist.linux-armv7l/wheel/mobspy 2024-05-07T18:15:07,248 creating build/bdist.linux-armv7l/wheel/mobspy/sbml_simulator 2024-05-07T18:15:07,249 copying build/lib/mobspy/sbml_simulator/__init__.py -> build/bdist.linux-armv7l/wheel/mobspy/sbml_simulator 2024-05-07T18:15:07,251 copying build/lib/mobspy/sbml_simulator/run.py -> build/bdist.linux-armv7l/wheel/mobspy/sbml_simulator 2024-05-07T18:15:07,253 copying build/lib/mobspy/sbml_simulator/SBMLWriter.py -> build/bdist.linux-armv7l/wheel/mobspy/sbml_simulator 2024-05-07T18:15:07,256 copying build/lib/mobspy/sbml_simulator/builder.py -> build/bdist.linux-armv7l/wheel/mobspy/sbml_simulator 2024-05-07T18:15:07,258 creating build/bdist.linux-armv7l/wheel/mobspy/simulation_logging 2024-05-07T18:15:07,259 copying build/lib/mobspy/simulation_logging/log_scripts.py -> build/bdist.linux-armv7l/wheel/mobspy/simulation_logging 2024-05-07T18:15:07,261 copying build/lib/mobspy/simulation_logging/__init__.py -> build/bdist.linux-armv7l/wheel/mobspy/simulation_logging 2024-05-07T18:15:07,262 creating build/bdist.linux-armv7l/wheel/mobspy/data_handler 2024-05-07T18:15:07,263 copying build/lib/mobspy/data_handler/__init__.py -> build/bdist.linux-armv7l/wheel/mobspy/data_handler 2024-05-07T18:15:07,265 copying build/lib/mobspy/data_handler/process_result_data.py -> build/bdist.linux-armv7l/wheel/mobspy/data_handler 2024-05-07T18:15:07,267 copying build/lib/mobspy/data_handler/time_series_object.py -> build/bdist.linux-armv7l/wheel/mobspy/data_handler 2024-05-07T18:15:07,270 copying build/lib/mobspy/__init__.py -> build/bdist.linux-armv7l/wheel/mobspy 2024-05-07T18:15:07,272 copying build/lib/mobspy/_version.py -> build/bdist.linux-armv7l/wheel/mobspy 2024-05-07T18:15:07,274 creating build/bdist.linux-armv7l/wheel/mobspy/modules 2024-05-07T18:15:07,275 copying build/lib/mobspy/modules/context_related_scripts.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-05-07T18:15:07,277 copying build/lib/mobspy/modules/class_of_meta_specie_named_any.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-05-07T18:15:07,280 copying build/lib/mobspy/modules/species_string_generator.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-05-07T18:15:07,282 copying build/lib/mobspy/modules/order_operators.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-05-07T18:15:07,285 copying build/lib/mobspy/modules/assignments_implementation.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-05-07T18:15:07,287 copying build/lib/mobspy/modules/set_counts_module.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-05-07T18:15:07,289 copying build/lib/mobspy/modules/reaction_construction_nb_parallel.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-05-07T18:15:07,292 copying build/lib/mobspy/modules/__init__.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-05-07T18:15:07,293 copying build/lib/mobspy/modules/function_rate_code.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-05-07T18:15:07,296 copying build/lib/mobspy/modules/reaction_construction_nb.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-05-07T18:15:07,298 copying build/lib/mobspy/modules/mobspy_parameters.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-05-07T18:15:07,301 copying build/lib/mobspy/modules/meta_class.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-05-07T18:15:07,304 copying build/lib/mobspy/modules/meta_class_utils.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-05-07T18:15:07,306 copying build/lib/mobspy/modules/event_functions.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-05-07T18:15:07,308 copying build/lib/mobspy/modules/logic_operator_objects.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-05-07T18:15:07,311 copying build/lib/mobspy/modules/user_functions.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-05-07T18:15:07,312 copying build/lib/mobspy/modules/unit_handler.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-05-07T18:15:07,315 copying build/lib/mobspy/modules/mobspy_expressions.py -> build/bdist.linux-armv7l/wheel/mobspy/modules 2024-05-07T18:15:07,318 creating build/bdist.linux-armv7l/wheel/mobspy/parameter_scripts 2024-05-07T18:15:07,319 copying build/lib/mobspy/parameter_scripts/parametric_sweeps.py -> build/bdist.linux-armv7l/wheel/mobspy/parameter_scripts 2024-05-07T18:15:07,320 copying build/lib/mobspy/parameter_scripts/__init__.py -> build/bdist.linux-armv7l/wheel/mobspy/parameter_scripts 2024-05-07T18:15:07,322 copying build/lib/mobspy/parameter_scripts/parameter_reader.py -> build/bdist.linux-armv7l/wheel/mobspy/parameter_scripts 2024-05-07T18:15:07,324 copying build/lib/mobspy/simulation.py -> build/bdist.linux-armv7l/wheel/mobspy 2024-05-07T18:15:07,327 creating build/bdist.linux-armv7l/wheel/mobspy/plot_scripts 2024-05-07T18:15:07,328 copying build/lib/mobspy/plot_scripts/process_plot_data.py -> build/bdist.linux-armv7l/wheel/mobspy/plot_scripts 2024-05-07T18:15:07,330 copying build/lib/mobspy/plot_scripts/statistics_calculations.py -> build/bdist.linux-armv7l/wheel/mobspy/plot_scripts 2024-05-07T18:15:07,332 copying build/lib/mobspy/plot_scripts/__init__.py -> build/bdist.linux-armv7l/wheel/mobspy/plot_scripts 2024-05-07T18:15:07,333 copying build/lib/mobspy/plot_scripts/default_plots.py -> build/bdist.linux-armv7l/wheel/mobspy/plot_scripts 2024-05-07T18:15:07,336 copying build/lib/mobspy/plot_scripts/hierarchical_plot.py -> build/bdist.linux-armv7l/wheel/mobspy/plot_scripts 2024-05-07T18:15:07,339 creating build/bdist.linux-armv7l/wheel/mobspy/parameters 2024-05-07T18:15:07,340 copying build/lib/mobspy/parameters/default_reader.py -> build/bdist.linux-armv7l/wheel/mobspy/parameters 2024-05-07T18:15:07,342 copying build/lib/mobspy/parameters/__init__.py -> build/bdist.linux-armv7l/wheel/mobspy/parameters 2024-05-07T18:15:07,344 copying build/lib/mobspy/parameters/example_reader.py -> build/bdist.linux-armv7l/wheel/mobspy/parameters 2024-05-07T18:15:07,346 creating build/bdist.linux-armv7l/wheel/mobspy/patch_scripts 2024-05-07T18:15:07,347 copying build/lib/mobspy/patch_scripts/basico_task_parametrization.py -> build/bdist.linux-armv7l/wheel/mobspy/patch_scripts 2024-05-07T18:15:07,352 copying build/lib/mobspy/patch_scripts/__init__.py -> build/bdist.linux-armv7l/wheel/mobspy/patch_scripts 2024-05-07T18:15:07,354 creating build/bdist.linux-armv7l/wheel/mobspy/parameter_estimation_data_loader 2024-05-07T18:15:07,355 copying build/lib/mobspy/parameter_estimation_data_loader/parameter_estimation_scripts.py -> build/bdist.linux-armv7l/wheel/mobspy/parameter_estimation_data_loader 2024-05-07T18:15:07,358 copying build/lib/mobspy/parameter_estimation_data_loader/__init__.py -> build/bdist.linux-armv7l/wheel/mobspy/parameter_estimation_data_loader 2024-05-07T18:15:07,360 copying build/lib/mobspy/parameter_estimation_data_loader/data_loader.py -> build/bdist.linux-armv7l/wheel/mobspy/parameter_estimation_data_loader 2024-05-07T18:15:07,362 creating build/bdist.linux-armv7l/wheel/mobspy/plot_params 2024-05-07T18:15:07,363 copying build/lib/mobspy/plot_params/__init__.py -> build/bdist.linux-armv7l/wheel/mobspy/plot_params 2024-05-07T18:15:07,365 copying build/lib/mobspy/plot_params/default_plot_reader.py -> build/bdist.linux-armv7l/wheel/mobspy/plot_params 2024-05-07T18:15:07,367 copying build/lib/mobspy/plot_params/example_plot_reader.py -> build/bdist.linux-armv7l/wheel/mobspy/plot_params 2024-05-07T18:15:07,369 running install_egg_info 2024-05-07T18:15:07,424 running egg_info 2024-05-07T18:15:07,450 writing mobspy.egg-info/PKG-INFO 2024-05-07T18:15:07,453 writing dependency_links to mobspy.egg-info/dependency_links.txt 2024-05-07T18:15:07,455 writing requirements to mobspy.egg-info/requires.txt 2024-05-07T18:15:07,456 writing top-level names to mobspy.egg-info/top_level.txt 2024-05-07T18:15:07,556 ERROR setuptools_scm._file_finders.git listing git files failed - pretending there aren't any 2024-05-07T18:15:07,559 reading manifest file 'mobspy.egg-info/SOURCES.txt' 2024-05-07T18:15:07,607 adding license file 'LICENSE' 2024-05-07T18:15:07,619 writing manifest file 'mobspy.egg-info/SOURCES.txt' 2024-05-07T18:15:07,622 Copying mobspy.egg-info to build/bdist.linux-armv7l/wheel/mobspy-2.4.1-py3.11.egg-info 2024-05-07T18:15:07,632 running install_scripts 2024-05-07T18:15:07,646 creating build/bdist.linux-armv7l/wheel/mobspy-2.4.1.dist-info/WHEEL 2024-05-07T18:15:07,648 creating '/tmp/pip-wheel-m5anzedq/mobspy-2.4.1-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-05-07T18:15:07,650 adding 'mobspy/__init__.py' 2024-05-07T18:15:07,651 adding 'mobspy/_version.py' 2024-05-07T18:15:07,656 adding 'mobspy/simulation.py' 2024-05-07T18:15:07,658 adding 'mobspy/data_handler/__init__.py' 2024-05-07T18:15:07,659 adding 'mobspy/data_handler/process_result_data.py' 2024-05-07T18:15:07,661 adding 'mobspy/data_handler/time_series_object.py' 2024-05-07T18:15:07,663 adding 'mobspy/modules/__init__.py' 2024-05-07T18:15:07,664 adding 'mobspy/modules/assignments_implementation.py' 2024-05-07T18:15:07,666 adding 'mobspy/modules/class_of_meta_specie_named_any.py' 2024-05-07T18:15:07,667 adding 'mobspy/modules/context_related_scripts.py' 2024-05-07T18:15:07,668 adding 'mobspy/modules/event_functions.py' 2024-05-07T18:15:07,670 adding 'mobspy/modules/function_rate_code.py' 2024-05-07T18:15:07,672 adding 'mobspy/modules/logic_operator_objects.py' 2024-05-07T18:15:07,681 adding 'mobspy/modules/meta_class.py' 2024-05-07T18:15:07,683 adding 'mobspy/modules/meta_class_utils.py' 2024-05-07T18:15:07,687 adding 'mobspy/modules/mobspy_expressions.py' 2024-05-07T18:15:07,688 adding 'mobspy/modules/mobspy_parameters.py' 2024-05-07T18:15:07,690 adding 'mobspy/modules/order_operators.py' 2024-05-07T18:15:07,693 adding 'mobspy/modules/reaction_construction_nb.py' 2024-05-07T18:15:07,695 adding 'mobspy/modules/reaction_construction_nb_parallel.py' 2024-05-07T18:15:07,697 adding 'mobspy/modules/set_counts_module.py' 2024-05-07T18:15:07,698 adding 'mobspy/modules/species_string_generator.py' 2024-05-07T18:15:07,700 adding 'mobspy/modules/unit_handler.py' 2024-05-07T18:15:07,701 adding 'mobspy/modules/user_functions.py' 2024-05-07T18:15:07,703 adding 'mobspy/parameter_estimation_data_loader/__init__.py' 2024-05-07T18:15:07,704 adding 'mobspy/parameter_estimation_data_loader/data_loader.py' 2024-05-07T18:15:07,706 adding 'mobspy/parameter_estimation_data_loader/parameter_estimation_scripts.py' 2024-05-07T18:15:07,707 adding 'mobspy/parameter_scripts/__init__.py' 2024-05-07T18:15:07,709 adding 'mobspy/parameter_scripts/parameter_reader.py' 2024-05-07T18:15:07,710 adding 'mobspy/parameter_scripts/parametric_sweeps.py' 2024-05-07T18:15:07,712 adding 'mobspy/parameters/__init__.py' 2024-05-07T18:15:07,713 adding 'mobspy/parameters/default_reader.py' 2024-05-07T18:15:07,714 adding 'mobspy/parameters/example_reader.py' 2024-05-07T18:15:07,716 adding 'mobspy/patch_scripts/__init__.py' 2024-05-07T18:15:07,724 adding 'mobspy/patch_scripts/basico_task_parametrization.py' 2024-05-07T18:15:07,726 adding 'mobspy/plot_params/__init__.py' 2024-05-07T18:15:07,727 adding 'mobspy/plot_params/default_plot_reader.py' 2024-05-07T18:15:07,728 adding 'mobspy/plot_params/example_plot_reader.py' 2024-05-07T18:15:07,730 adding 'mobspy/plot_scripts/__init__.py' 2024-05-07T18:15:07,731 adding 'mobspy/plot_scripts/default_plots.py' 2024-05-07T18:15:07,734 adding 'mobspy/plot_scripts/hierarchical_plot.py' 2024-05-07T18:15:07,735 adding 'mobspy/plot_scripts/process_plot_data.py' 2024-05-07T18:15:07,737 adding 'mobspy/plot_scripts/statistics_calculations.py' 2024-05-07T18:15:07,739 adding 'mobspy/sbml_simulator/SBMLWriter.py' 2024-05-07T18:15:07,740 adding 'mobspy/sbml_simulator/__init__.py' 2024-05-07T18:15:07,741 adding 'mobspy/sbml_simulator/builder.py' 2024-05-07T18:15:07,743 adding 'mobspy/sbml_simulator/run.py' 2024-05-07T18:15:07,744 adding 'mobspy/simulation_logging/__init__.py' 2024-05-07T18:15:07,745 adding 'mobspy/simulation_logging/log_scripts.py' 2024-05-07T18:15:07,747 adding 'mobspy-2.4.1.dist-info/LICENSE' 2024-05-07T18:15:07,749 adding 'mobspy-2.4.1.dist-info/METADATA' 2024-05-07T18:15:07,750 adding 'mobspy-2.4.1.dist-info/WHEEL' 2024-05-07T18:15:07,750 adding 'mobspy-2.4.1.dist-info/top_level.txt' 2024-05-07T18:15:07,752 adding 'mobspy-2.4.1.dist-info/RECORD' 2024-05-07T18:15:07,755 removing build/bdist.linux-armv7l/wheel 2024-05-07T18:15:07,896 Building wheel for mobspy (setup.py): finished with status 'done' 2024-05-07T18:15:07,900 Created wheel for mobspy: filename=mobspy-2.4.1-py3-none-any.whl size=113907 sha256=0e44c8f2e6147a6aedff489b0754dc37fc1bb56e4a31447d10c1a288587f36ba 2024-05-07T18:15:07,901 Stored in directory: /tmp/pip-ephem-wheel-cache-egzdtbyx/wheels/ef/c5/d5/242ef764d27df428173ffd95681ab8851d547fd9e769cc34f7 2024-05-07T18:15:07,913 Successfully built mobspy 2024-05-07T18:15:07,919 Removed build tracker: '/tmp/pip-build-tracker-wixgfvbs'