2024-05-08T23:11:27,065 Created temporary directory: /tmp/pip-build-tracker-c2__f3_4 2024-05-08T23:11:27,067 Initialized build tracking at /tmp/pip-build-tracker-c2__f3_4 2024-05-08T23:11:27,067 Created build tracker: /tmp/pip-build-tracker-c2__f3_4 2024-05-08T23:11:27,067 Entered build tracker: /tmp/pip-build-tracker-c2__f3_4 2024-05-08T23:11:27,068 Created temporary directory: /tmp/pip-wheel-p7kexily 2024-05-08T23:11:27,071 Created temporary directory: /tmp/pip-ephem-wheel-cache-9frgwvc1 2024-05-08T23:11:27,093 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-05-08T23:11:27,096 2 location(s) to search for versions of lifton: 2024-05-08T23:11:27,096 * https://pypi.org/simple/lifton/ 2024-05-08T23:11:27,096 * https://www.piwheels.org/simple/lifton/ 2024-05-08T23:11:27,097 Fetching project page and analyzing links: https://pypi.org/simple/lifton/ 2024-05-08T23:11:27,098 Getting page https://pypi.org/simple/lifton/ 2024-05-08T23:11:27,099 Found index url https://pypi.org/simple/ 2024-05-08T23:11:27,318 Fetched page https://pypi.org/simple/lifton/ as application/vnd.pypi.simple.v1+json 2024-05-08T23:11:27,322 Skipping link: No binaries permitted for lifton: https://files.pythonhosted.org/packages/bb/6f/16db3cb001a27f878d0f0780d46ac46a080d5c4114119eed9e1087c33d18/lifton-0.0.1-py3-none-any.whl (from https://pypi.org/simple/lifton/) (requires-python:>=3.6) 2024-05-08T23:11:27,323 Found link https://files.pythonhosted.org/packages/13/2e/e8107811b9073a71d88b2a093509643eac35df4d083e4310baeff4767888/lifton-0.0.1.tar.gz (from https://pypi.org/simple/lifton/) (requires-python:>=3.6), version: 0.0.1 2024-05-08T23:11:27,324 Skipping link: No binaries permitted for lifton: https://files.pythonhosted.org/packages/24/96/25cb8f98833b41222d96adac8f647a269943f8c0075270bc17194ea39375/lifton-0.0.2-py3-none-any.whl (from https://pypi.org/simple/lifton/) (requires-python:>=3.6) 2024-05-08T23:11:27,325 Found link https://files.pythonhosted.org/packages/5f/c3/7f80480c767aa1e9d89a50bfbc3614e0c6b87bf09b4de7a0d613e95ae323/lifton-0.0.2.tar.gz (from https://pypi.org/simple/lifton/) (requires-python:>=3.6), version: 0.0.2 2024-05-08T23:11:27,326 Skipping link: No binaries permitted for lifton: https://files.pythonhosted.org/packages/61/42/c98e886ca0346735bf8811af6873bb9349cc4ccbe870efe4652056b60fe1/lifton-0.0.3-py3-none-any.whl (from https://pypi.org/simple/lifton/) (requires-python:>=3.6) 2024-05-08T23:11:27,328 Found link https://files.pythonhosted.org/packages/9d/4e/d5381bac5a6e00627cc252144df07b6ca20601e297d96acd3ac78556369b/lifton-0.0.3.tar.gz (from https://pypi.org/simple/lifton/) (requires-python:>=3.6), version: 0.0.3 2024-05-08T23:11:27,329 Skipping link: No binaries permitted for lifton: https://files.pythonhosted.org/packages/6e/ac/9d689d7909abf9a11d2ff73f2b314130fb66b7401b3c25d82ce2459d9a68/lifton-1.0.0-py3-none-any.whl (from https://pypi.org/simple/lifton/) (requires-python:>=3.6) 2024-05-08T23:11:27,331 Found link https://files.pythonhosted.org/packages/ff/e9/50ea1955e4902c023673006695e646362f3175ef403fc5d7c4803001325a/lifton-1.0.0.tar.gz (from https://pypi.org/simple/lifton/) (requires-python:>=3.6), version: 1.0.0 2024-05-08T23:11:27,332 Skipping link: No binaries permitted for lifton: https://files.pythonhosted.org/packages/02/70/5e343587dcd8812c840160e071a5ff2e07e9a1655fc938490d0a93b9f0bd/lifton-1.0.1-py3-none-any.whl (from https://pypi.org/simple/lifton/) (requires-python:>=3.6) 2024-05-08T23:11:27,334 Found link https://files.pythonhosted.org/packages/16/3d/5c53476aca8780a78384658e836ce19a8024600818016c27faec269dc15c/lifton-1.0.1.tar.gz (from https://pypi.org/simple/lifton/) (requires-python:>=3.6), version: 1.0.1 2024-05-08T23:11:27,335 Skipping link: No binaries permitted for lifton: https://files.pythonhosted.org/packages/32/90/fa0f61c0dab9576d3fb0690bbd13c8374f79ca1806a5a66d512fd3ba642e/lifton-1.0.2-py3-none-any.whl (from https://pypi.org/simple/lifton/) (requires-python:>=3.6) 2024-05-08T23:11:27,337 Found link https://files.pythonhosted.org/packages/5e/ab/12254450e995726fbb6531d8a1de325056bf04f36ec55a93d98e7893e7b2/lifton-1.0.2.tar.gz (from https://pypi.org/simple/lifton/) (requires-python:>=3.6), version: 1.0.2 2024-05-08T23:11:27,338 Fetching project page and analyzing links: https://www.piwheels.org/simple/lifton/ 2024-05-08T23:11:27,341 Getting page https://www.piwheels.org/simple/lifton/ 2024-05-08T23:11:27,343 Found index url https://www.piwheels.org/simple/ 2024-05-08T23:11:27,560 Fetched page https://www.piwheels.org/simple/lifton/ as text/html 2024-05-08T23:11:27,563 Skipping link: No binaries permitted for lifton: https://www.piwheels.org/simple/lifton/lifton-1.0.1-py3-none-any.whl#sha256=571ded1d00c28cdcaf33f56124aabb15e7d62176b66e7e7c3ab347675fab274c (from https://www.piwheels.org/simple/lifton/) (requires-python:>=3.6) 2024-05-08T23:11:27,563 Skipping link: No binaries permitted for lifton: https://www.piwheels.org/simple/lifton/lifton-1.0.0-py3-none-any.whl#sha256=1841d668f80b3a80f345edbf7999a8b2fa2d44c94e824f97385e328caed49ee4 (from https://www.piwheels.org/simple/lifton/) (requires-python:>=3.6) 2024-05-08T23:11:27,564 Skipping link: No binaries permitted for lifton: https://www.piwheels.org/simple/lifton/lifton-0.0.3-py3-none-any.whl#sha256=75bf7a2b29c1038d1a557078137bbc18589e636a45ab938e635f5ad1d178c4a4 (from https://www.piwheels.org/simple/lifton/) (requires-python:>=3.6) 2024-05-08T23:11:27,564 Skipping link: No binaries permitted for lifton: https://www.piwheels.org/simple/lifton/lifton-0.0.2-py3-none-any.whl#sha256=fc2e23edf13de3a32045a8523dc764b502b15ce3bef4a5ce9ec591af023f9d8b (from https://www.piwheels.org/simple/lifton/) (requires-python:>=3.6) 2024-05-08T23:11:27,565 Skipping link: No binaries permitted for lifton: https://www.piwheels.org/simple/lifton/lifton-0.0.1-py3-none-any.whl#sha256=a98808f9baa1174b52883629fe95d038b30e3bea493f18a55af481cdc670d536 (from https://www.piwheels.org/simple/lifton/) (requires-python:>=3.6) 2024-05-08T23:11:27,565 Skipping link: not a file: https://www.piwheels.org/simple/lifton/ 2024-05-08T23:11:27,566 Skipping link: not a file: https://pypi.org/simple/lifton/ 2024-05-08T23:11:27,585 Given no hashes to check 1 links for project 'lifton': discarding no candidates 2024-05-08T23:11:27,603 Collecting lifton==1.0.2 2024-05-08T23:11:27,605 Created temporary directory: /tmp/pip-unpack-0kb9moe6 2024-05-08T23:11:27,818 Downloading lifton-1.0.2.tar.gz (72 kB) 2024-05-08T23:11:28,119 Added lifton==1.0.2 from https://files.pythonhosted.org/packages/5e/ab/12254450e995726fbb6531d8a1de325056bf04f36ec55a93d98e7893e7b2/lifton-1.0.2.tar.gz to build tracker '/tmp/pip-build-tracker-c2__f3_4' 2024-05-08T23:11:28,120 Running setup.py (path:/tmp/pip-wheel-p7kexily/lifton_9f97dc4cd6d04dc8879b6a7ad896dfba/setup.py) egg_info for package lifton 2024-05-08T23:11:28,121 Created temporary directory: /tmp/pip-pip-egg-info-6cs6xcbf 2024-05-08T23:11:28,122 Preparing metadata (setup.py): started 2024-05-08T23:11:28,123 Running command python setup.py egg_info 2024-05-08T23:11:29,549 running egg_info 2024-05-08T23:11:29,551 creating /tmp/pip-pip-egg-info-6cs6xcbf/lifton.egg-info 2024-05-08T23:11:29,576 writing /tmp/pip-pip-egg-info-6cs6xcbf/lifton.egg-info/PKG-INFO 2024-05-08T23:11:29,580 writing dependency_links to /tmp/pip-pip-egg-info-6cs6xcbf/lifton.egg-info/dependency_links.txt 2024-05-08T23:11:29,582 writing entry points to /tmp/pip-pip-egg-info-6cs6xcbf/lifton.egg-info/entry_points.txt 2024-05-08T23:11:29,583 writing requirements to /tmp/pip-pip-egg-info-6cs6xcbf/lifton.egg-info/requires.txt 2024-05-08T23:11:29,584 writing top-level names to /tmp/pip-pip-egg-info-6cs6xcbf/lifton.egg-info/top_level.txt 2024-05-08T23:11:29,586 writing manifest file '/tmp/pip-pip-egg-info-6cs6xcbf/lifton.egg-info/SOURCES.txt' 2024-05-08T23:11:29,674 reading manifest file '/tmp/pip-pip-egg-info-6cs6xcbf/lifton.egg-info/SOURCES.txt' 2024-05-08T23:11:29,676 adding license file 'LICENSE' 2024-05-08T23:11:29,678 writing manifest file '/tmp/pip-pip-egg-info-6cs6xcbf/lifton.egg-info/SOURCES.txt' 2024-05-08T23:11:29,795 Preparing metadata (setup.py): finished with status 'done' 2024-05-08T23:11:29,802 Source in /tmp/pip-wheel-p7kexily/lifton_9f97dc4cd6d04dc8879b6a7ad896dfba has version 1.0.2, which satisfies requirement lifton==1.0.2 from https://files.pythonhosted.org/packages/5e/ab/12254450e995726fbb6531d8a1de325056bf04f36ec55a93d98e7893e7b2/lifton-1.0.2.tar.gz 2024-05-08T23:11:29,803 Removed lifton==1.0.2 from https://files.pythonhosted.org/packages/5e/ab/12254450e995726fbb6531d8a1de325056bf04f36ec55a93d98e7893e7b2/lifton-1.0.2.tar.gz from build tracker '/tmp/pip-build-tracker-c2__f3_4' 2024-05-08T23:11:29,810 Created temporary directory: /tmp/pip-unpack-mbro88pb 2024-05-08T23:11:29,811 Created temporary directory: /tmp/pip-unpack-l99pm_gx 2024-05-08T23:11:29,828 Building wheels for collected packages: lifton 2024-05-08T23:11:29,832 Created temporary directory: /tmp/pip-wheel-ikghp2h8 2024-05-08T23:11:29,833 Building wheel for lifton (setup.py): started 2024-05-08T23:11:29,834 Destination directory: /tmp/pip-wheel-ikghp2h8 2024-05-08T23:11:29,835 Running command python setup.py bdist_wheel 2024-05-08T23:11:30,899 running bdist_wheel 2024-05-08T23:11:30,995 running build 2024-05-08T23:11:30,996 running build_py 2024-05-08T23:11:31,023 creating build 2024-05-08T23:11:31,023 creating build/lib 2024-05-08T23:11:31,024 creating build/lib/lifton 2024-05-08T23:11:31,025 copying lifton/annotation.py -> build/lib/lifton 2024-05-08T23:11:31,028 copying lifton/run_evaluation.py -> build/lib/lifton 2024-05-08T23:11:31,030 copying lifton/run_liftoff.py -> build/lib/lifton 2024-05-08T23:11:31,032 copying lifton/lifton_class.py -> build/lib/lifton 2024-05-08T23:11:31,035 copying lifton/variants.py -> build/lib/lifton 2024-05-08T23:11:31,037 copying lifton/lifton.py -> build/lib/lifton 2024-05-08T23:11:31,039 copying lifton/intervals.py -> build/lib/lifton 2024-05-08T23:11:31,041 copying lifton/extract_sequence.py -> build/lib/lifton 2024-05-08T23:11:31,043 copying lifton/get_id_fraction.py -> build/lib/lifton 2024-05-08T23:11:31,045 copying lifton/lifton_utils.py -> build/lib/lifton 2024-05-08T23:11:31,047 copying lifton/run_miniprot.py -> build/lib/lifton 2024-05-08T23:11:31,049 copying lifton/__init__.py -> build/lib/lifton 2024-05-08T23:11:31,051 copying lifton/stats.py -> build/lib/lifton 2024-05-08T23:11:31,053 copying lifton/logger.py -> build/lib/lifton 2024-05-08T23:11:31,054 copying lifton/align.py -> build/lib/lifton 2024-05-08T23:11:31,056 copying lifton/protein_maximization.py -> build/lib/lifton 2024-05-08T23:11:31,059 creating build/lib/lifton/liftoff 2024-05-08T23:11:31,060 copying lifton/liftoff/extract_features.py -> build/lib/lifton/liftoff 2024-05-08T23:11:31,062 copying lifton/liftoff/aligned_seg.py -> build/lib/lifton/liftoff 2024-05-08T23:11:31,064 copying lifton/liftoff/liftoff_utils.py -> build/lib/lifton/liftoff 2024-05-08T23:11:31,066 copying lifton/liftoff/polish.py -> build/lib/lifton/liftoff 2024-05-08T23:11:31,068 copying lifton/liftoff/lift_features.py -> build/lib/lifton/liftoff 2024-05-08T23:11:31,070 copying lifton/liftoff/merge_lifted_features.py -> build/lib/lifton/liftoff 2024-05-08T23:11:31,072 copying lifton/liftoff/fix_overlapping_features.py -> build/lib/lifton/liftoff 2024-05-08T23:11:31,074 copying lifton/liftoff/liftoff_main.py -> build/lib/lifton/liftoff 2024-05-08T23:11:31,076 copying lifton/liftoff/__init__.py -> build/lib/lifton/liftoff 2024-05-08T23:11:31,078 copying lifton/liftoff/write_new_gff.py -> build/lib/lifton/liftoff 2024-05-08T23:11:31,080 copying lifton/liftoff/liftover_types.py -> build/lib/lifton/liftoff 2024-05-08T23:11:31,083 copying lifton/liftoff/feature_hierarchy.py -> build/lib/lifton/liftoff 2024-05-08T23:11:31,084 copying lifton/liftoff/find_best_mapping.py -> build/lib/lifton/liftoff 2024-05-08T23:11:31,087 copying lifton/liftoff/new_feature.py -> build/lib/lifton/liftoff 2024-05-08T23:11:31,088 copying lifton/liftoff/align_features.py -> build/lib/lifton/liftoff 2024-05-08T23:11:31,091 creating build/lib/lifton/liftoff/tests 2024-05-08T23:11:31,092 copying lifton/liftoff/tests/test_advanced.py -> build/lib/lifton/liftoff/tests 2024-05-08T23:11:31,094 copying lifton/liftoff/tests/__init__.py -> build/lib/lifton/liftoff/tests 2024-05-08T23:11:31,096 copying lifton/liftoff/tests/test_basic.py -> build/lib/lifton/liftoff/tests 2024-05-08T23:11:31,126 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-05-08T23:11:31,127 !! 2024-05-08T23:11:31,128 ******************************************************************************** 2024-05-08T23:11:31,128 Please avoid running ``setup.py`` directly. 2024-05-08T23:11:31,128 Instead, use pypa/build, pypa/installer or other 2024-05-08T23:11:31,129 standards-based tools. 2024-05-08T23:11:31,130 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-05-08T23:11:31,130 ******************************************************************************** 2024-05-08T23:11:31,131 !! 2024-05-08T23:11:31,131 self.initialize_options() 2024-05-08T23:11:31,152 installing to build/bdist.linux-armv7l/wheel 2024-05-08T23:11:31,153 running install 2024-05-08T23:11:31,177 running install_lib 2024-05-08T23:11:31,201 creating build/bdist.linux-armv7l 2024-05-08T23:11:31,202 creating build/bdist.linux-armv7l/wheel 2024-05-08T23:11:31,204 creating build/bdist.linux-armv7l/wheel/lifton 2024-05-08T23:11:31,205 copying build/lib/lifton/annotation.py -> build/bdist.linux-armv7l/wheel/lifton 2024-05-08T23:11:31,207 copying build/lib/lifton/run_evaluation.py -> build/bdist.linux-armv7l/wheel/lifton 2024-05-08T23:11:31,209 copying build/lib/lifton/run_liftoff.py -> build/bdist.linux-armv7l/wheel/lifton 2024-05-08T23:11:31,211 copying build/lib/lifton/lifton_class.py -> build/bdist.linux-armv7l/wheel/lifton 2024-05-08T23:11:31,214 copying build/lib/lifton/variants.py -> build/bdist.linux-armv7l/wheel/lifton 2024-05-08T23:11:31,216 copying build/lib/lifton/lifton.py -> build/bdist.linux-armv7l/wheel/lifton 2024-05-08T23:11:31,219 copying build/lib/lifton/intervals.py -> build/bdist.linux-armv7l/wheel/lifton 2024-05-08T23:11:31,220 copying build/lib/lifton/extract_sequence.py -> build/bdist.linux-armv7l/wheel/lifton 2024-05-08T23:11:31,222 copying build/lib/lifton/get_id_fraction.py -> build/bdist.linux-armv7l/wheel/lifton 2024-05-08T23:11:31,224 copying build/lib/lifton/lifton_utils.py -> build/bdist.linux-armv7l/wheel/lifton 2024-05-08T23:11:31,226 copying build/lib/lifton/run_miniprot.py -> build/bdist.linux-armv7l/wheel/lifton 2024-05-08T23:11:31,229 copying build/lib/lifton/__init__.py -> build/bdist.linux-armv7l/wheel/lifton 2024-05-08T23:11:31,230 copying build/lib/lifton/stats.py -> build/bdist.linux-armv7l/wheel/lifton 2024-05-08T23:11:31,233 creating build/bdist.linux-armv7l/wheel/lifton/liftoff 2024-05-08T23:11:31,234 copying build/lib/lifton/liftoff/extract_features.py -> build/bdist.linux-armv7l/wheel/lifton/liftoff 2024-05-08T23:11:31,236 copying build/lib/lifton/liftoff/aligned_seg.py -> build/bdist.linux-armv7l/wheel/lifton/liftoff 2024-05-08T23:11:31,238 copying build/lib/lifton/liftoff/liftoff_utils.py -> build/bdist.linux-armv7l/wheel/lifton/liftoff 2024-05-08T23:11:31,240 copying build/lib/lifton/liftoff/polish.py -> build/bdist.linux-armv7l/wheel/lifton/liftoff 2024-05-08T23:11:31,242 copying build/lib/lifton/liftoff/lift_features.py -> build/bdist.linux-armv7l/wheel/lifton/liftoff 2024-05-08T23:11:31,245 copying build/lib/lifton/liftoff/merge_lifted_features.py -> build/bdist.linux-armv7l/wheel/lifton/liftoff 2024-05-08T23:11:31,247 creating build/bdist.linux-armv7l/wheel/lifton/liftoff/tests 2024-05-08T23:11:31,248 copying build/lib/lifton/liftoff/tests/test_advanced.py -> build/bdist.linux-armv7l/wheel/lifton/liftoff/tests 2024-05-08T23:11:31,250 copying build/lib/lifton/liftoff/tests/__init__.py -> build/bdist.linux-armv7l/wheel/lifton/liftoff/tests 2024-05-08T23:11:31,252 copying build/lib/lifton/liftoff/tests/test_basic.py -> build/bdist.linux-armv7l/wheel/lifton/liftoff/tests 2024-05-08T23:11:31,254 copying build/lib/lifton/liftoff/fix_overlapping_features.py -> build/bdist.linux-armv7l/wheel/lifton/liftoff 2024-05-08T23:11:31,256 copying build/lib/lifton/liftoff/liftoff_main.py -> build/bdist.linux-armv7l/wheel/lifton/liftoff 2024-05-08T23:11:31,259 copying build/lib/lifton/liftoff/__init__.py -> build/bdist.linux-armv7l/wheel/lifton/liftoff 2024-05-08T23:11:31,260 copying build/lib/lifton/liftoff/write_new_gff.py -> build/bdist.linux-armv7l/wheel/lifton/liftoff 2024-05-08T23:11:31,262 copying build/lib/lifton/liftoff/liftover_types.py -> build/bdist.linux-armv7l/wheel/lifton/liftoff 2024-05-08T23:11:31,264 copying build/lib/lifton/liftoff/feature_hierarchy.py -> build/bdist.linux-armv7l/wheel/lifton/liftoff 2024-05-08T23:11:31,266 copying build/lib/lifton/liftoff/find_best_mapping.py -> build/bdist.linux-armv7l/wheel/lifton/liftoff 2024-05-08T23:11:31,269 copying build/lib/lifton/liftoff/new_feature.py -> build/bdist.linux-armv7l/wheel/lifton/liftoff 2024-05-08T23:11:31,270 copying build/lib/lifton/liftoff/align_features.py -> build/bdist.linux-armv7l/wheel/lifton/liftoff 2024-05-08T23:11:31,273 copying build/lib/lifton/logger.py -> build/bdist.linux-armv7l/wheel/lifton 2024-05-08T23:11:31,275 copying build/lib/lifton/align.py -> build/bdist.linux-armv7l/wheel/lifton 2024-05-08T23:11:31,277 copying build/lib/lifton/protein_maximization.py -> build/bdist.linux-armv7l/wheel/lifton 2024-05-08T23:11:31,279 running install_egg_info 2024-05-08T23:11:31,343 running egg_info 2024-05-08T23:11:31,343 creating lifton.egg-info 2024-05-08T23:11:31,368 writing lifton.egg-info/PKG-INFO 2024-05-08T23:11:31,372 writing dependency_links to lifton.egg-info/dependency_links.txt 2024-05-08T23:11:31,374 writing entry points to lifton.egg-info/entry_points.txt 2024-05-08T23:11:31,375 writing requirements to lifton.egg-info/requires.txt 2024-05-08T23:11:31,376 writing top-level names to lifton.egg-info/top_level.txt 2024-05-08T23:11:31,378 writing manifest file 'lifton.egg-info/SOURCES.txt' 2024-05-08T23:11:31,406 reading manifest file 'lifton.egg-info/SOURCES.txt' 2024-05-08T23:11:31,408 adding license file 'LICENSE' 2024-05-08T23:11:31,410 writing manifest file 'lifton.egg-info/SOURCES.txt' 2024-05-08T23:11:31,412 Copying lifton.egg-info to build/bdist.linux-armv7l/wheel/lifton-1.0.2-py3.11.egg-info 2024-05-08T23:11:31,424 running install_scripts 2024-05-08T23:11:31,444 creating build/bdist.linux-armv7l/wheel/lifton-1.0.2.dist-info/WHEEL 2024-05-08T23:11:31,447 creating '/tmp/pip-wheel-ikghp2h8/lifton-1.0.2-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-05-08T23:11:31,449 adding 'lifton/__init__.py' 2024-05-08T23:11:31,451 adding 'lifton/align.py' 2024-05-08T23:11:31,452 adding 'lifton/annotation.py' 2024-05-08T23:11:31,454 adding 'lifton/extract_sequence.py' 2024-05-08T23:11:31,455 adding 'lifton/get_id_fraction.py' 2024-05-08T23:11:31,457 adding 'lifton/intervals.py' 2024-05-08T23:11:31,459 adding 'lifton/lifton.py' 2024-05-08T23:11:31,463 adding 'lifton/lifton_class.py' 2024-05-08T23:11:31,466 adding 'lifton/lifton_utils.py' 2024-05-08T23:11:31,467 adding 'lifton/logger.py' 2024-05-08T23:11:31,469 adding 'lifton/protein_maximization.py' 2024-05-08T23:11:31,470 adding 'lifton/run_evaluation.py' 2024-05-08T23:11:31,472 adding 'lifton/run_liftoff.py' 2024-05-08T23:11:31,474 adding 'lifton/run_miniprot.py' 2024-05-08T23:11:31,475 adding 'lifton/stats.py' 2024-05-08T23:11:31,477 adding 'lifton/variants.py' 2024-05-08T23:11:31,478 adding 'lifton/liftoff/__init__.py' 2024-05-08T23:11:31,480 adding 'lifton/liftoff/align_features.py' 2024-05-08T23:11:31,482 adding 'lifton/liftoff/aligned_seg.py' 2024-05-08T23:11:31,483 adding 'lifton/liftoff/extract_features.py' 2024-05-08T23:11:31,485 adding 'lifton/liftoff/feature_hierarchy.py' 2024-05-08T23:11:31,487 adding 'lifton/liftoff/find_best_mapping.py' 2024-05-08T23:11:31,489 adding 'lifton/liftoff/fix_overlapping_features.py' 2024-05-08T23:11:31,490 adding 'lifton/liftoff/lift_features.py' 2024-05-08T23:11:31,492 adding 'lifton/liftoff/liftoff_main.py' 2024-05-08T23:11:31,494 adding 'lifton/liftoff/liftoff_utils.py' 2024-05-08T23:11:31,495 adding 'lifton/liftoff/liftover_types.py' 2024-05-08T23:11:31,496 adding 'lifton/liftoff/merge_lifted_features.py' 2024-05-08T23:11:31,497 adding 'lifton/liftoff/new_feature.py' 2024-05-08T23:11:31,499 adding 'lifton/liftoff/polish.py' 2024-05-08T23:11:31,501 adding 'lifton/liftoff/write_new_gff.py' 2024-05-08T23:11:31,502 adding 'lifton/liftoff/tests/__init__.py' 2024-05-08T23:11:31,503 adding 'lifton/liftoff/tests/test_advanced.py' 2024-05-08T23:11:31,504 adding 'lifton/liftoff/tests/test_basic.py' 2024-05-08T23:11:31,511 adding 'lifton-1.0.2.dist-info/LICENSE' 2024-05-08T23:11:31,514 adding 'lifton-1.0.2.dist-info/METADATA' 2024-05-08T23:11:31,515 adding 'lifton-1.0.2.dist-info/WHEEL' 2024-05-08T23:11:31,515 adding 'lifton-1.0.2.dist-info/entry_points.txt' 2024-05-08T23:11:31,516 adding 'lifton-1.0.2.dist-info/top_level.txt' 2024-05-08T23:11:31,517 adding 'lifton-1.0.2.dist-info/RECORD' 2024-05-08T23:11:31,520 removing build/bdist.linux-armv7l/wheel 2024-05-08T23:11:31,650 Building wheel for lifton (setup.py): finished with status 'done' 2024-05-08T23:11:31,653 Created wheel for lifton: filename=lifton-1.0.2-py3-none-any.whl size=78177 sha256=9d1e8e6d9d99ce252f2e392514b37c6f7ede7e8d4b1b8e6ea0673d7bc4ef24ca 2024-05-08T23:11:31,654 Stored in directory: /tmp/pip-ephem-wheel-cache-9frgwvc1/wheels/56/50/4f/86ed19627499d1b98e8b8ec1ad81063f57005843e51b2203c2 2024-05-08T23:11:31,668 Successfully built lifton 2024-05-08T23:11:31,673 Removed build tracker: '/tmp/pip-build-tracker-c2__f3_4'