2024-05-09T22:55:39,636 Created temporary directory: /tmp/pip-build-tracker-4d4ku9w8 2024-05-09T22:55:39,638 Initialized build tracking at /tmp/pip-build-tracker-4d4ku9w8 2024-05-09T22:55:39,638 Created build tracker: /tmp/pip-build-tracker-4d4ku9w8 2024-05-09T22:55:39,639 Entered build tracker: /tmp/pip-build-tracker-4d4ku9w8 2024-05-09T22:55:39,640 Created temporary directory: /tmp/pip-wheel-bctu04vb 2024-05-09T22:55:39,643 Created temporary directory: /tmp/pip-ephem-wheel-cache-93cdm677 2024-05-09T22:55:39,673 Looking in indexes: https://pypi.org/simple, https://www.piwheels.org/simple 2024-05-09T22:55:39,677 2 location(s) to search for versions of protein-design-tools: 2024-05-09T22:55:39,677 * https://pypi.org/simple/protein-design-tools/ 2024-05-09T22:55:39,677 * https://www.piwheels.org/simple/protein-design-tools/ 2024-05-09T22:55:39,692 Fetching project page and analyzing links: https://pypi.org/simple/protein-design-tools/ 2024-05-09T22:55:39,694 Getting page https://pypi.org/simple/protein-design-tools/ 2024-05-09T22:55:39,696 Found index url https://pypi.org/simple/ 2024-05-09T22:55:39,838 Fetched page https://pypi.org/simple/protein-design-tools/ as application/vnd.pypi.simple.v1+json 2024-05-09T22:55:39,842 Found link https://files.pythonhosted.org/packages/ed/a6/a527cb82986e54d8bf9c1f1de71036e3474c6fde773c40dbdcd2e857793e/protein-design-tools-0.1.0.tar.gz (from https://pypi.org/simple/protein-design-tools/), version: 0.1.0 2024-05-09T22:55:39,844 Found link https://files.pythonhosted.org/packages/99/f2/9710ed6b56c764ed7ecb1035655952234d65fef841aa220f727e7dc58c58/protein_design_tools-0.1.1.tar.gz (from https://pypi.org/simple/protein-design-tools/), version: 0.1.1 2024-05-09T22:55:39,846 Found link https://files.pythonhosted.org/packages/b2/8e/8559cd3b6f8454390d45afb9015819cdb01aa51ed9b53b64b044b9342bb2/protein_design_tools-0.1.3.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.3 2024-05-09T22:55:39,849 Found link https://files.pythonhosted.org/packages/05/90/17c62aa7320a475051eea3f857d854065f49e1c6e241816662de784d4495/protein_design_tools-0.1.4.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.4 2024-05-09T22:55:39,851 Found link https://files.pythonhosted.org/packages/2b/4f/e576ff4b0c17f92a752670ae249b18c4b22681d162b3ea54eb7c8187e934/protein-design-tools-0.1.5.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.5 2024-05-09T22:55:39,853 Found link https://files.pythonhosted.org/packages/2e/43/6bbc489853ecce726a00644099615c17b574b2fe318c53409f7071eb1829/protein_design_tools-0.1.6.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.6 2024-05-09T22:55:39,854 Found link https://files.pythonhosted.org/packages/6c/af/d4f52f5271c5185dcb0683fdea82ccd34534111b732c96913ee6cee20ba2/protein_design_tools-0.1.7.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.7 2024-05-09T22:55:39,856 Found link https://files.pythonhosted.org/packages/14/24/a1d06b818f3d46d7318b86f0334181bb8b9134f71856b2a0ca69ea24d040/protein_design_tools-0.1.8.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.8 2024-05-09T22:55:39,857 Found link https://files.pythonhosted.org/packages/9c/73/da486d6ea5db2b79ee4188d258d6b13734e412cf0c16cc9d40d09900699d/protein_design_tools-0.1.9.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.9 2024-05-09T22:55:39,858 Found link https://files.pythonhosted.org/packages/9e/09/ece7ef27626839515873c975edec7409b1501fe0d06f0e798ec6fefd3168/protein_design_tools-0.1.10.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.10 2024-05-09T22:55:39,859 Found link https://files.pythonhosted.org/packages/be/d1/7552b3dafe349a6c0b89507eaf0b75338f5fa977b281f546bb30649942b7/protein_design_tools-0.1.11.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.11 2024-05-09T22:55:39,860 Found link https://files.pythonhosted.org/packages/a9/18/5ea417d67a863fc629b4b3a5689993ecf100b2a3241d94bff1e30b83f3f5/protein_design_tools-0.1.12.tar.gz (from https://pypi.org/simple/protein-design-tools/) (requires-python:>=3.6), version: 0.1.12 2024-05-09T22:55:39,861 Fetching project page and analyzing links: https://www.piwheels.org/simple/protein-design-tools/ 2024-05-09T22:55:39,862 Getting page https://www.piwheels.org/simple/protein-design-tools/ 2024-05-09T22:55:39,863 Found index url https://www.piwheels.org/simple/ 2024-05-09T22:55:40,529 Fetched page https://www.piwheels.org/simple/protein-design-tools/ as text/html 2024-05-09T22:55:40,536 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.8-py3-none-any.whl#sha256=f1747869a6004c8e1f0fb378cf55ab0df7c666a0a419414de8b98d92cacb2132 (from https://www.piwheels.org/simple/protein-design-tools/) (requires-python:>=3.6) 2024-05-09T22:55:40,537 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.7-py3-none-any.whl#sha256=0e32edd830836de2ef77b03f2375ddd185dabc9fec3b9b9983f05b4f4d545a26 (from https://www.piwheels.org/simple/protein-design-tools/) (requires-python:>=3.6) 2024-05-09T22:55:40,538 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.6-py3-none-any.whl#sha256=b7597266a06dd8c3544dd12e69d278db111719d068166100b2fde95e5438a85d (from https://www.piwheels.org/simple/protein-design-tools/) (requires-python:>=3.6) 2024-05-09T22:55:40,539 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.5-py3-none-any.whl#sha256=d39131f1daa2a71dfaf41651cbf0905f806d074b025dc60e908fd1562896da5e (from https://www.piwheels.org/simple/protein-design-tools/) (requires-python:>=3.6) 2024-05-09T22:55:40,539 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.4-py3-none-any.whl#sha256=8fb6924808b71bdc89472e84af147a439817e0a3a42d6c8ebbb24ab24d5aed48 (from https://www.piwheels.org/simple/protein-design-tools/) (requires-python:>=3.6) 2024-05-09T22:55:40,540 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.3-py3-none-any.whl#sha256=3ca03677ec61152b0d2633cdaf790e7d1f0ad26fe98b3e941801c0fb4f764543 (from https://www.piwheels.org/simple/protein-design-tools/) (requires-python:>=3.6) 2024-05-09T22:55:40,541 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.1-py3-none-any.whl#sha256=6906d32c055f62c2001f7821cd213d2dea1d429b436a820f794718def3ffc302 (from https://www.piwheels.org/simple/protein-design-tools/) 2024-05-09T22:55:40,542 Skipping link: No binaries permitted for protein-design-tools: https://www.piwheels.org/simple/protein-design-tools/protein_design_tools-0.1.0-py3-none-any.whl#sha256=b026a4bfbdb9619aa35b321f689be75094c1772ae9843728423ab7b58df7c6da (from https://www.piwheels.org/simple/protein-design-tools/) 2024-05-09T22:55:40,543 Skipping link: not a file: https://www.piwheels.org/simple/protein-design-tools/ 2024-05-09T22:55:40,544 Skipping link: not a file: https://pypi.org/simple/protein-design-tools/ 2024-05-09T22:55:40,594 Given no hashes to check 1 links for project 'protein-design-tools': discarding no candidates 2024-05-09T22:55:40,620 Collecting protein-design-tools==0.1.10 2024-05-09T22:55:40,623 Created temporary directory: /tmp/pip-unpack-kz1rsitf 2024-05-09T22:55:40,856 Downloading protein_design_tools-0.1.10.tar.gz (12 kB) 2024-05-09T22:55:40,892 Added protein-design-tools==0.1.10 from https://files.pythonhosted.org/packages/9e/09/ece7ef27626839515873c975edec7409b1501fe0d06f0e798ec6fefd3168/protein_design_tools-0.1.10.tar.gz to build tracker '/tmp/pip-build-tracker-4d4ku9w8' 2024-05-09T22:55:40,894 Running setup.py (path:/tmp/pip-wheel-bctu04vb/protein-design-tools_244a95a9699f4e18a5b2108e576d5776/setup.py) egg_info for package protein-design-tools 2024-05-09T22:55:40,895 Created temporary directory: /tmp/pip-pip-egg-info-ui6h4iyb 2024-05-09T22:55:40,896 Preparing metadata (setup.py): started 2024-05-09T22:55:40,897 Running command python setup.py egg_info 2024-05-09T22:55:42,003 running egg_info 2024-05-09T22:55:42,004 creating /tmp/pip-pip-egg-info-ui6h4iyb/protein_design_tools.egg-info 2024-05-09T22:55:42,028 writing /tmp/pip-pip-egg-info-ui6h4iyb/protein_design_tools.egg-info/PKG-INFO 2024-05-09T22:55:42,031 writing dependency_links to /tmp/pip-pip-egg-info-ui6h4iyb/protein_design_tools.egg-info/dependency_links.txt 2024-05-09T22:55:42,033 writing requirements to /tmp/pip-pip-egg-info-ui6h4iyb/protein_design_tools.egg-info/requires.txt 2024-05-09T22:55:42,034 writing top-level names to /tmp/pip-pip-egg-info-ui6h4iyb/protein_design_tools.egg-info/top_level.txt 2024-05-09T22:55:42,036 writing manifest file '/tmp/pip-pip-egg-info-ui6h4iyb/protein_design_tools.egg-info/SOURCES.txt' 2024-05-09T22:55:42,118 reading manifest file '/tmp/pip-pip-egg-info-ui6h4iyb/protein_design_tools.egg-info/SOURCES.txt' 2024-05-09T22:55:42,120 adding license file 'LICENSE' 2024-05-09T22:55:42,121 writing manifest file '/tmp/pip-pip-egg-info-ui6h4iyb/protein_design_tools.egg-info/SOURCES.txt' 2024-05-09T22:55:42,239 Preparing metadata (setup.py): finished with status 'done' 2024-05-09T22:55:42,243 Source in /tmp/pip-wheel-bctu04vb/protein-design-tools_244a95a9699f4e18a5b2108e576d5776 has version 0.1.10, which satisfies requirement protein-design-tools==0.1.10 from https://files.pythonhosted.org/packages/9e/09/ece7ef27626839515873c975edec7409b1501fe0d06f0e798ec6fefd3168/protein_design_tools-0.1.10.tar.gz 2024-05-09T22:55:42,244 Removed protein-design-tools==0.1.10 from https://files.pythonhosted.org/packages/9e/09/ece7ef27626839515873c975edec7409b1501fe0d06f0e798ec6fefd3168/protein_design_tools-0.1.10.tar.gz from build tracker '/tmp/pip-build-tracker-4d4ku9w8' 2024-05-09T22:55:42,249 Created temporary directory: /tmp/pip-unpack-xotqkue_ 2024-05-09T22:55:42,250 Created temporary directory: /tmp/pip-unpack-a15pj_az 2024-05-09T22:55:42,254 Building wheels for collected packages: protein-design-tools 2024-05-09T22:55:42,258 Created temporary directory: /tmp/pip-wheel-viqo35_4 2024-05-09T22:55:42,259 Building wheel for protein-design-tools (setup.py): started 2024-05-09T22:55:42,260 Destination directory: /tmp/pip-wheel-viqo35_4 2024-05-09T22:55:42,260 Running command python setup.py bdist_wheel 2024-05-09T22:55:43,327 running bdist_wheel 2024-05-09T22:55:43,424 running build 2024-05-09T22:55:43,425 running build_py 2024-05-09T22:55:43,452 creating build 2024-05-09T22:55:43,453 creating build/lib 2024-05-09T22:55:43,453 creating build/lib/protein_design_tools 2024-05-09T22:55:43,455 copying protein_design_tools/test.py -> build/lib/protein_design_tools 2024-05-09T22:55:43,457 copying protein_design_tools/__init__.py -> build/lib/protein_design_tools 2024-05-09T22:55:43,458 copying protein_design_tools/protein_structure_utils.py -> build/lib/protein_design_tools 2024-05-09T22:55:43,461 copying protein_design_tools/protein_structure.py -> build/lib/protein_design_tools 2024-05-09T22:55:43,489 /usr/local/lib/python3.11/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. 2024-05-09T22:55:43,490 !! 2024-05-09T22:55:43,491 ******************************************************************************** 2024-05-09T22:55:43,491 Please avoid running ``setup.py`` directly. 2024-05-09T22:55:43,492 Instead, use pypa/build, pypa/installer or other 2024-05-09T22:55:43,493 standards-based tools. 2024-05-09T22:55:43,494 See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. 2024-05-09T22:55:43,494 ******************************************************************************** 2024-05-09T22:55:43,495 !! 2024-05-09T22:55:43,496 self.initialize_options() 2024-05-09T22:55:43,515 installing to build/bdist.linux-armv7l/wheel 2024-05-09T22:55:43,515 running install 2024-05-09T22:55:43,540 running install_lib 2024-05-09T22:55:43,564 creating build/bdist.linux-armv7l 2024-05-09T22:55:43,565 creating build/bdist.linux-armv7l/wheel 2024-05-09T22:55:43,566 creating build/bdist.linux-armv7l/wheel/protein_design_tools 2024-05-09T22:55:43,567 copying build/lib/protein_design_tools/test.py -> build/bdist.linux-armv7l/wheel/protein_design_tools 2024-05-09T22:55:43,569 copying build/lib/protein_design_tools/__init__.py -> build/bdist.linux-armv7l/wheel/protein_design_tools 2024-05-09T22:55:43,570 copying build/lib/protein_design_tools/protein_structure_utils.py -> build/bdist.linux-armv7l/wheel/protein_design_tools 2024-05-09T22:55:43,573 copying build/lib/protein_design_tools/protein_structure.py -> build/bdist.linux-armv7l/wheel/protein_design_tools 2024-05-09T22:55:43,575 running install_egg_info 2024-05-09T22:55:43,638 running egg_info 2024-05-09T22:55:43,662 writing protein_design_tools.egg-info/PKG-INFO 2024-05-09T22:55:43,665 writing dependency_links to protein_design_tools.egg-info/dependency_links.txt 2024-05-09T22:55:43,666 writing requirements to protein_design_tools.egg-info/requires.txt 2024-05-09T22:55:43,667 writing top-level names to protein_design_tools.egg-info/top_level.txt 2024-05-09T22:55:43,694 reading manifest file 'protein_design_tools.egg-info/SOURCES.txt' 2024-05-09T22:55:43,696 adding license file 'LICENSE' 2024-05-09T22:55:43,698 writing manifest file 'protein_design_tools.egg-info/SOURCES.txt' 2024-05-09T22:55:43,699 Copying protein_design_tools.egg-info to build/bdist.linux-armv7l/wheel/protein_design_tools-0.1.10-py3.11.egg-info 2024-05-09T22:55:43,708 running install_scripts 2024-05-09T22:55:43,721 creating build/bdist.linux-armv7l/wheel/protein_design_tools-0.1.10.dist-info/WHEEL 2024-05-09T22:55:43,724 creating '/tmp/pip-wheel-viqo35_4/protein_design_tools-0.1.10-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it 2024-05-09T22:55:43,726 adding 'protein_design_tools/__init__.py' 2024-05-09T22:55:43,727 adding 'protein_design_tools/protein_structure.py' 2024-05-09T22:55:43,730 adding 'protein_design_tools/protein_structure_utils.py' 2024-05-09T22:55:43,732 adding 'protein_design_tools/test.py' 2024-05-09T22:55:43,734 adding 'protein_design_tools-0.1.10.dist-info/LICENSE' 2024-05-09T22:55:43,735 adding 'protein_design_tools-0.1.10.dist-info/METADATA' 2024-05-09T22:55:43,736 adding 'protein_design_tools-0.1.10.dist-info/WHEEL' 2024-05-09T22:55:43,737 adding 'protein_design_tools-0.1.10.dist-info/top_level.txt' 2024-05-09T22:55:43,738 adding 'protein_design_tools-0.1.10.dist-info/RECORD' 2024-05-09T22:55:43,739 removing build/bdist.linux-armv7l/wheel 2024-05-09T22:55:43,862 Building wheel for protein-design-tools (setup.py): finished with status 'done' 2024-05-09T22:55:43,865 Created wheel for protein-design-tools: filename=protein_design_tools-0.1.10-py3-none-any.whl size=12213 sha256=d7e2a99fe064326d2b4c1fcc6ee98dc054b35d1ceccb8fe8665a0310c2d5dde3 2024-05-09T22:55:43,866 Stored in directory: /tmp/pip-ephem-wheel-cache-93cdm677/wheels/b5/1f/e2/16ba1241826f42b8111a92e14ad825393adea6d400fb870b12 2024-05-09T22:55:43,875 Successfully built protein-design-tools 2024-05-09T22:55:43,879 Removed build tracker: '/tmp/pip-build-tracker-4d4ku9w8'